BLASTX nr result

ID: Panax21_contig00000513 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00000513
         (1686 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004140563.1| PREDICTED: eukaryotic peptide chain release ...   552   0.0  
gb|ADN33689.1| eukaryotic peptide chain release factor subunit [...   552   0.0  
ref|XP_004142086.1| PREDICTED: eukaryotic peptide chain release ...   552   0.0  
ref|XP_003534095.1| PREDICTED: eukaryotic peptide chain release ...   553   0.0  
ref|XP_002321067.1| predicted protein [Populus trichocarpa] gi|2...   553   0.0  

>ref|XP_004140563.1| PREDICTED: eukaryotic peptide chain release factor subunit 1-3-like
            [Cucumis sativus] gi|449487371|ref|XP_004157593.1|
            PREDICTED: eukaryotic peptide chain release factor
            subunit 1-3-like [Cucumis sativus]
          Length = 436

 Score =  552 bits (1423), Expect(3) = 0.0
 Identities = 277/288 (96%), Positives = 286/288 (99%)
 Frame = -2

Query: 1298 VLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTDDGKEKKVTIDFEPFRPINASLYLCDNK 1119
            VLGAITSAQQRLKLYNKVPPNGLVLYTGTIVT+DGKEKKVTIDFEPFRPINASLYLCDNK
Sbjct: 70   VLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTEDGKEKKVTIDFEPFRPINASLYLCDNK 129

Query: 1118 FHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFTVDLPKKHGRGGQSALRF 939
            FHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKF+VDLPKKHGRGGQSALRF
Sbjct: 130  FHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPKKHGRGGQSALRF 189

Query: 938  ARLRMEKRHNYVRKTAELATQFYINPAISQPNVSGLILAGSADFKTELSQSDMFDPRLQA 759
            ARLRMEKRHNYVRKTAELATQF+INPA SQPNV+GLILAGSADFKTELSQSDMFDPRLQA
Sbjct: 190  ARLRMEKRHNYVRKTAELATQFFINPATSQPNVAGLILAGSADFKTELSQSDMFDPRLQA 249

Query: 758  KILNVVDVSYGGENGFNQAIELSSEILSNVKFIQEKRLIGKYFEEISQDTGKYVFGVDDT 579
            KILNVVDVSYGGENGFNQAIELSSEILSNVKFIQEKRLIGKYFEEISQDTGKYVFGVDDT
Sbjct: 250  KILNVVDVSYGGENGFNQAIELSSEILSNVKFIQEKRLIGKYFEEISQDTGKYVFGVDDT 309

Query: 578  LKALEMGAVEILIVWENLDINRYVLKHSTTSEIIIKHLNKDQEADQSN 435
            LKALEMGAVEILIVWENLDINRYVLK+++T EIIIKHLNK+QEA+QSN
Sbjct: 310  LKALEMGAVEILIVWENLDINRYVLKNASTGEIIIKHLNKEQEANQSN 357



 Score =  103 bits (258), Expect(3) = 0.0
 Identities = 47/47 (100%), Positives = 47/47 (100%)
 Frame = -3

Query: 313 EWFANEYKKFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDIRSF 173
           EWFANEYKKFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDIRSF
Sbjct: 377 EWFANEYKKFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDIRSF 423



 Score = 55.8 bits (133), Expect(3) = 0.0
 Identities = 29/46 (63%), Positives = 31/46 (67%)
 Frame = -3

Query: 1546 MSDSHETDKNXXXXXXXXXXXXXXXARGNGTSMISLIMPPRDQISR 1409
            M+D+HETDKN               ARGNGTSMISLIMPPRDQISR
Sbjct: 1    MADAHETDKNIEIWKIKKLIKALEAARGNGTSMISLIMPPRDQISR 46


>gb|ADN33689.1| eukaryotic peptide chain release factor subunit [Cucumis melo subsp.
            melo]
          Length = 436

 Score =  552 bits (1423), Expect(3) = 0.0
 Identities = 276/288 (95%), Positives = 287/288 (99%)
 Frame = -2

Query: 1298 VLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTDDGKEKKVTIDFEPFRPINASLYLCDNK 1119
            VLGAITSAQQRLKLYNKVPPNGLVLYTGTIVT+DGKEKKVTIDFEPFRPINASLYLCDNK
Sbjct: 70   VLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTEDGKEKKVTIDFEPFRPINASLYLCDNK 129

Query: 1118 FHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFTVDLPKKHGRGGQSALRF 939
            FHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKF+VDLPKKHGRGGQSALRF
Sbjct: 130  FHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPKKHGRGGQSALRF 189

Query: 938  ARLRMEKRHNYVRKTAELATQFYINPAISQPNVSGLILAGSADFKTELSQSDMFDPRLQA 759
            ARLRMEKRHNYVRKTAELATQF+INPA SQPNV+GLILAGSADFKTELSQSDMFDPRLQA
Sbjct: 190  ARLRMEKRHNYVRKTAELATQFFINPATSQPNVAGLILAGSADFKTELSQSDMFDPRLQA 249

Query: 758  KILNVVDVSYGGENGFNQAIELSSEILSNVKFIQEKRLIGKYFEEISQDTGKYVFGVDDT 579
            KILNVVDVSYGGENGFNQAIELSSEILSNVKFIQEKRLIGKYFEEISQDTGKYVFGVDDT
Sbjct: 250  KILNVVDVSYGGENGFNQAIELSSEILSNVKFIQEKRLIGKYFEEISQDTGKYVFGVDDT 309

Query: 578  LKALEMGAVEILIVWENLDINRYVLKHSTTSEIIIKHLNKDQEADQSN 435
            LKALEMGAVEILIVWENLDINRYVLK+++T+EI+IKHLNK+QEA+QSN
Sbjct: 310  LKALEMGAVEILIVWENLDINRYVLKNASTAEIVIKHLNKEQEANQSN 357



 Score =  103 bits (258), Expect(3) = 0.0
 Identities = 47/47 (100%), Positives = 47/47 (100%)
 Frame = -3

Query: 313 EWFANEYKKFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDIRSF 173
           EWFANEYKKFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDIRSF
Sbjct: 377 EWFANEYKKFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDIRSF 423



 Score = 55.8 bits (133), Expect(3) = 0.0
 Identities = 29/46 (63%), Positives = 31/46 (67%)
 Frame = -3

Query: 1546 MSDSHETDKNXXXXXXXXXXXXXXXARGNGTSMISLIMPPRDQISR 1409
            M+D+HETDKN               ARGNGTSMISLIMPPRDQISR
Sbjct: 1    MADAHETDKNIEIWKIKKLIKALEAARGNGTSMISLIMPPRDQISR 46


>ref|XP_004142086.1| PREDICTED: eukaryotic peptide chain release factor subunit 1-3-like
            [Cucumis sativus]
          Length = 436

 Score =  552 bits (1422), Expect(3) = 0.0
 Identities = 277/288 (96%), Positives = 285/288 (98%)
 Frame = -2

Query: 1298 VLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTDDGKEKKVTIDFEPFRPINASLYLCDNK 1119
            VLGAITSAQQRLKLYNKVPPNGLVLYTGTIVT+DGKEKKVTIDFEPFRPINASLYLCDNK
Sbjct: 70   VLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTEDGKEKKVTIDFEPFRPINASLYLCDNK 129

Query: 1118 FHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFTVDLPKKHGRGGQSALRF 939
            FHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKF+VDLPKKHGRGGQSALRF
Sbjct: 130  FHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPKKHGRGGQSALRF 189

Query: 938  ARLRMEKRHNYVRKTAELATQFYINPAISQPNVSGLILAGSADFKTELSQSDMFDPRLQA 759
            ARLRMEKRHNYVRKTAELATQF+INPA SQPNV+GLILAGSADFKTELSQSDMFDPRLQA
Sbjct: 190  ARLRMEKRHNYVRKTAELATQFFINPATSQPNVAGLILAGSADFKTELSQSDMFDPRLQA 249

Query: 758  KILNVVDVSYGGENGFNQAIELSSEILSNVKFIQEKRLIGKYFEEISQDTGKYVFGVDDT 579
            KILNVVDVSYGGENGFNQAIELSSEILSNVKFIQEKRLIGKYFEEISQDTGKYVFGVDDT
Sbjct: 250  KILNVVDVSYGGENGFNQAIELSSEILSNVKFIQEKRLIGKYFEEISQDTGKYVFGVDDT 309

Query: 578  LKALEMGAVEILIVWENLDINRYVLKHSTTSEIIIKHLNKDQEADQSN 435
            LKALEMGAVEILIVWENLDINRYVLK++ T EIIIKHLNK+QEA+QSN
Sbjct: 310  LKALEMGAVEILIVWENLDINRYVLKNAATGEIIIKHLNKEQEANQSN 357



 Score =  103 bits (258), Expect(3) = 0.0
 Identities = 47/47 (100%), Positives = 47/47 (100%)
 Frame = -3

Query: 313 EWFANEYKKFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDIRSF 173
           EWFANEYKKFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDIRSF
Sbjct: 377 EWFANEYKKFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDIRSF 423



 Score = 55.8 bits (133), Expect(3) = 0.0
 Identities = 29/46 (63%), Positives = 31/46 (67%)
 Frame = -3

Query: 1546 MSDSHETDKNXXXXXXXXXXXXXXXARGNGTSMISLIMPPRDQISR 1409
            M+D+HETDKN               ARGNGTSMISLIMPPRDQISR
Sbjct: 1    MADAHETDKNIEIWKIKKLIKALEAARGNGTSMISLIMPPRDQISR 46


>ref|XP_003534095.1| PREDICTED: eukaryotic peptide chain release factor subunit 1-3-like
            [Glycine max]
          Length = 437

 Score =  553 bits (1425), Expect(3) = 0.0
 Identities = 276/288 (95%), Positives = 284/288 (98%)
 Frame = -2

Query: 1298 VLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTDDGKEKKVTIDFEPFRPINASLYLCDNK 1119
            VLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTDDGKEKKVTIDFEPFRPINASLYLCDNK
Sbjct: 70   VLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTDDGKEKKVTIDFEPFRPINASLYLCDNK 129

Query: 1118 FHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFTVDLPKKHGRGGQSALRF 939
            FHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKF+VDLPKKHGRGGQSALRF
Sbjct: 130  FHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPKKHGRGGQSALRF 189

Query: 938  ARLRMEKRHNYVRKTAELATQFYINPAISQPNVSGLILAGSADFKTELSQSDMFDPRLQA 759
            ARLRMEKRHNYVRKTAELATQFYINPA SQPNVSGLILAGSADFKTELSQSDMFDPRLQA
Sbjct: 190  ARLRMEKRHNYVRKTAELATQFYINPATSQPNVSGLILAGSADFKTELSQSDMFDPRLQA 249

Query: 758  KILNVVDVSYGGENGFNQAIELSSEILSNVKFIQEKRLIGKYFEEISQDTGKYVFGVDDT 579
            KILNVVDVSYGGENGFNQAIELS+EILSNVKFIQEKRLIGKYFEEISQDTGKYVFGVDDT
Sbjct: 250  KILNVVDVSYGGENGFNQAIELSAEILSNVKFIQEKRLIGKYFEEISQDTGKYVFGVDDT 309

Query: 578  LKALEMGAVEILIVWENLDINRYVLKHSTTSEIIIKHLNKDQEADQSN 435
            LKALEMGAVE LIVWENLD+NRYVLK+S T E++IKHLNK+Q+ADQSN
Sbjct: 310  LKALEMGAVETLIVWENLDMNRYVLKNSATGEVVIKHLNKEQDADQSN 357



 Score =  101 bits (252), Expect(3) = 0.0
 Identities = 45/47 (95%), Positives = 47/47 (100%)
 Frame = -3

Query: 313 EWFANEYKKFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDIRSF 173
           EWFANEYK+FGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLD+RSF
Sbjct: 377 EWFANEYKRFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDMRSF 423



 Score = 54.3 bits (129), Expect(3) = 0.0
 Identities = 29/46 (63%), Positives = 29/46 (63%)
 Frame = -3

Query: 1546 MSDSHETDKNXXXXXXXXXXXXXXXARGNGTSMISLIMPPRDQISR 1409
            M D HETDKN               ARGNGTSMISLIMPPRDQISR
Sbjct: 1    MVDGHETDKNIEVWKIKKLIKALEAARGNGTSMISLIMPPRDQISR 46


>ref|XP_002321067.1| predicted protein [Populus trichocarpa] gi|222861840|gb|EEE99382.1|
            predicted protein [Populus trichocarpa]
          Length = 436

 Score =  553 bits (1425), Expect(3) = 0.0
 Identities = 277/288 (96%), Positives = 284/288 (98%)
 Frame = -2

Query: 1298 VLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTDDGKEKKVTIDFEPFRPINASLYLCDNK 1119
            VLGAITSAQQRLKLYNKVPPNGLVLYTGTIVT+DGKEKKVTIDFEPF+PINASLYLCDNK
Sbjct: 70   VLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTEDGKEKKVTIDFEPFKPINASLYLCDNK 129

Query: 1118 FHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFTVDLPKKHGRGGQSALRF 939
            FHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFTVDLPKKHGRGGQSALRF
Sbjct: 130  FHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFTVDLPKKHGRGGQSALRF 189

Query: 938  ARLRMEKRHNYVRKTAELATQFYINPAISQPNVSGLILAGSADFKTELSQSDMFDPRLQA 759
            ARLRMEKRHNYVRKTAELATQF+INPA SQPNV+GLILAGSADFKTELSQSDMFDPRLQA
Sbjct: 190  ARLRMEKRHNYVRKTAELATQFFINPATSQPNVAGLILAGSADFKTELSQSDMFDPRLQA 249

Query: 758  KILNVVDVSYGGENGFNQAIELSSEILSNVKFIQEKRLIGKYFEEISQDTGKYVFGVDDT 579
            KILNVVDVSYGGENGFNQAIELS+EILSNVKFIQEKRLIGKYFEEISQDTGKYVFGVDDT
Sbjct: 250  KILNVVDVSYGGENGFNQAIELSAEILSNVKFIQEKRLIGKYFEEISQDTGKYVFGVDDT 309

Query: 578  LKALEMGAVEILIVWENLDINRYVLKHSTTSEIIIKHLNKDQEADQSN 435
            LKALEMGAVEILIVWENLDINRY LK+S T EIIIKHLNKDQEADQ+N
Sbjct: 310  LKALEMGAVEILIVWENLDINRYTLKNSATGEIIIKHLNKDQEADQNN 357



 Score =  101 bits (252), Expect(3) = 0.0
 Identities = 45/47 (95%), Positives = 47/47 (100%)
 Frame = -3

Query: 313 EWFANEYKKFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDIRSF 173
           EWFANEYK+FGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLD+RSF
Sbjct: 377 EWFANEYKRFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDMRSF 423



 Score = 53.9 bits (128), Expect(3) = 0.0
 Identities = 28/46 (60%), Positives = 30/46 (65%)
 Frame = -3

Query: 1546 MSDSHETDKNXXXXXXXXXXXXXXXARGNGTSMISLIMPPRDQISR 1409
            M+D HE+DKN               ARGNGTSMISLIMPPRDQISR
Sbjct: 1    MADGHESDKNIEIWKIKKLIKALESARGNGTSMISLIMPPRDQISR 46


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