BLASTX nr result

ID: Panax21_contig00000246 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00000246
         (1012 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004167338.1| PREDICTED: putative E3 ubiquitin-protein lig...   139   4e-65
ref|XP_004134060.1| PREDICTED: putative E3 ubiquitin-protein lig...   139   5e-65
ref|XP_002311673.1| predicted protein [Populus trichocarpa] gi|2...   137   6e-64
ref|XP_002332748.1| predicted protein [Populus trichocarpa] gi|2...   138   4e-63
emb|CAN72662.1| hypothetical protein VITISV_013890 [Vitis vinifera]   158   2e-62

>ref|XP_004167338.1| PREDICTED: putative E3 ubiquitin-protein ligase XBAT35-like
           [Cucumis sativus]
          Length = 459

 Score =  139 bits (351), Expect(3) = 4e-65
 Identities = 90/203 (44%), Positives = 112/203 (55%), Gaps = 1/203 (0%)
 Frame = +2

Query: 122 IKLAPANASDKEQLKWFCNACKGIHQVMNPSFPFHTKGLDVAGTAPPASEDLELVMAINA 301
           +KLA  N +DKEQL+WFCNACKGI  +M+P+F     G  V+ TAPP SED+EL MAINA
Sbjct: 225 LKLASGNENDKEQLQWFCNACKGITSMMHPTFMSGNHGPGVSATAPPDSEDVELAMAINA 284

Query: 302 SLQSAIPKRPLALDTQPDLGPHTSTSWTGPTDITNHNGSAALGPPSPCKGCSSEWEILGD 481
           S+QS I  RP   D  P     TS+S TGP   T H  S  LG         SE    G 
Sbjct: 285 SIQSVIHGRPPFPDPNPSSEASTSSSHTGPVGQTTH--STKLGTN------ESEMNEAGQ 336

Query: 482 VPNNNPVSVVQTPLESLTPVPA-PSAPPIEHAVIDAGPIHYPSVDSNPVHLSCPAVEMLA 658
               N    +QT   ++TP  A PSAP     ++D G IHYPS+DS+P+ LS        
Sbjct: 337 SITANEHPQIQT---NVTPPDAVPSAPLAADEILDNGAIHYPSIDSSPIDLSSQTAHNAP 393

Query: 659 ATADGIKEDDGACSSCVIYV*TP 727
             A G  +D+ + SSCVI +  P
Sbjct: 394 LQA-GEGKDETSSSSCVICLDAP 415



 Score =  106 bits (265), Expect(3) = 4e-65
 Identities = 45/52 (86%), Positives = 48/52 (92%)
 Frame = +1

Query: 706 CNICLDAPVEGACIPCGHMAGCMTCLNEIKGKKWGCPVCRAEIDQVLRLYAV 861
           C ICLDAPV+GACIPCGHMAGCM CL EIK KKWGCPVCRA+IDQV+RLYAV
Sbjct: 408 CVICLDAPVQGACIPCGHMAGCMNCLTEIKSKKWGCPVCRAKIDQVVRLYAV 459



 Score = 50.4 bits (119), Expect(3) = 4e-65
 Identities = 22/32 (68%), Positives = 28/32 (87%)
 Frame = +3

Query: 3   SKPFKLELAIYYSPQDAKPRTIFALWKANMEE 98
           SKPFKLELAIY S QDA+PRT+  LWKA++++
Sbjct: 173 SKPFKLELAIYTSLQDAQPRTVVQLWKADLDQ 204


>ref|XP_004134060.1| PREDICTED: putative E3 ubiquitin-protein ligase XBAT35-like
           [Cucumis sativus]
          Length = 459

 Score =  139 bits (350), Expect(3) = 5e-65
 Identities = 90/203 (44%), Positives = 112/203 (55%), Gaps = 1/203 (0%)
 Frame = +2

Query: 122 IKLAPANASDKEQLKWFCNACKGIHQVMNPSFPFHTKGLDVAGTAPPASEDLELVMAINA 301
           +KLA  N +DKEQL+WFCNACKGI  +M+P+F     G  V+ TAPP SED+EL MAINA
Sbjct: 225 LKLASGNENDKEQLQWFCNACKGITSMMHPTFMSGNHGPGVSATAPPDSEDVELAMAINA 284

Query: 302 SLQSAIPKRPLALDTQPDLGPHTSTSWTGPTDITNHNGSAALGPPSPCKGCSSEWEILGD 481
           S+QS I  RP   D  P     TS+S TGP   T H  S  LG         SE    G 
Sbjct: 285 SIQSVIHGRPPFPDPNPSSEASTSSSHTGPVGQTTH--STKLGTN------ESEMNEAGQ 336

Query: 482 VPNNNPVSVVQTPLESLTPVPA-PSAPPIEHAVIDAGPIHYPSVDSNPVHLSCPAVEMLA 658
               N    +QT   ++TP  A PSAP     ++D G IHYPS+DS+P+ LS        
Sbjct: 337 SITANEHPQIQT---NVTPPDAVPSAPLAADEILDNGAIHYPSIDSSPIDLSSQTAHNAP 393

Query: 659 ATADGIKEDDGACSSCVIYV*TP 727
             A G  +D+ + SSCVI +  P
Sbjct: 394 LQA-GEGKDEMSSSSCVICLDAP 415



 Score =  106 bits (265), Expect(3) = 5e-65
 Identities = 45/52 (86%), Positives = 48/52 (92%)
 Frame = +1

Query: 706 CNICLDAPVEGACIPCGHMAGCMTCLNEIKGKKWGCPVCRAEIDQVLRLYAV 861
           C ICLDAPV+GACIPCGHMAGCM CL EIK KKWGCPVCRA+IDQV+RLYAV
Sbjct: 408 CVICLDAPVQGACIPCGHMAGCMNCLTEIKSKKWGCPVCRAKIDQVVRLYAV 459



 Score = 50.4 bits (119), Expect(3) = 5e-65
 Identities = 22/32 (68%), Positives = 28/32 (87%)
 Frame = +3

Query: 3   SKPFKLELAIYYSPQDAKPRTIFALWKANMEE 98
           SKPFKLELAIY S QDA+PRT+  LWKA++++
Sbjct: 173 SKPFKLELAIYTSLQDAQPRTVVQLWKADLDQ 204


>ref|XP_002311673.1| predicted protein [Populus trichocarpa] gi|222851493|gb|EEE89040.1|
           predicted protein [Populus trichocarpa]
          Length = 442

 Score =  137 bits (345), Expect(3) = 6e-64
 Identities = 84/198 (42%), Positives = 117/198 (59%), Gaps = 1/198 (0%)
 Frame = +2

Query: 122 IKLAPANASDKEQLKWFCNACKGIHQVMN-PSFPFHTKGLDVAGTAPPASEDLELVMAIN 298
           IKLAPAN SDK+QL+WFC+ACKGI QVM+ P+F  +++   V  TAPP++ED+E+ MA+N
Sbjct: 225 IKLAPANESDKQQLQWFCDACKGIQQVMHPPAFLHNSQAPAVQATAPPSAEDIEIAMAMN 284

Query: 299 ASLQSAIPKRPLALDTQPDLGPHTSTSWTGPTDITNHNGSAALGPPSPCKGCSSEWEILG 478
           A +QSA  +RP+  D     G  +STSWT                       + + +I  
Sbjct: 285 AYIQSA-AERPI-FDPHSSAGASSSTSWT-------------------TSSSTQQTKI-- 321

Query: 479 DVPNNNPVSVVQTPLESLTPVPAPSAPPIEHAVIDAGPIHYPSVDSNPVHLSCPAVEMLA 658
               N+ ++ VQT  ++   V  PSAPPI   +++ GPIHYPS+DS+P+  S  +VE L 
Sbjct: 322 ---QNSSIADVQTATDAQDSV--PSAPPIVDEIVEDGPIHYPSIDSSPIDTSSLSVENLP 376

Query: 659 ATADGIKEDDGACSSCVI 712
               G K +DG  SSCVI
Sbjct: 377 ENT-GEKREDGGSSSCVI 393



 Score =  104 bits (259), Expect(3) = 6e-64
 Identities = 45/52 (86%), Positives = 48/52 (92%)
 Frame = +1

Query: 706 CNICLDAPVEGACIPCGHMAGCMTCLNEIKGKKWGCPVCRAEIDQVLRLYAV 861
           C ICLDA VEGACIPCGHMAGCM+CL EIK KKWGCPVCRA+IDQV+RLYAV
Sbjct: 391 CVICLDALVEGACIPCGHMAGCMSCLKEIKAKKWGCPVCRAKIDQVVRLYAV 442



 Score = 51.2 bits (121), Expect(3) = 6e-64
 Identities = 23/31 (74%), Positives = 27/31 (87%)
 Frame = +3

Query: 6   KPFKLELAIYYSPQDAKPRTIFALWKANMEE 98
           +P+KLELAIY   QDA+PRTI ALWKAN+EE
Sbjct: 174 RPYKLELAIYSRLQDAQPRTIVALWKANLEE 204


>ref|XP_002332748.1| predicted protein [Populus trichocarpa] gi|222833076|gb|EEE71553.1|
           predicted protein [Populus trichocarpa]
          Length = 444

 Score =  138 bits (348), Expect(3) = 4e-63
 Identities = 88/203 (43%), Positives = 123/203 (60%), Gaps = 1/203 (0%)
 Frame = +2

Query: 122 IKLAPANASDKEQLKWFCNACKGIHQVMN-PSFPFHTKGLDVAGTAPPASEDLELVMAIN 298
           +KLAPAN  DK+QL+WFC+ACKGI QVM+ P F   ++ L V  TAPP+ ED E+ MAIN
Sbjct: 225 LKLAPANERDKQQLQWFCDACKGIPQVMHPPEFLSKSQNLAVQATAPPSDEDPEIAMAIN 284

Query: 299 ASLQSAIPKRPLALDTQPDLGPHTSTSWTGPTDITNHNGSAALGPPSPCKGCSSEWEILG 478
           AS+QSA+ ++P++ DT    G  +STS          +GS+           + + +IL 
Sbjct: 285 ASIQSAMVEQPIS-DTHSSTGASSSTSCVS-------SGSS-----------TQQTKIL- 324

Query: 479 DVPNNNPVSVVQTPLESLTPVPAPSAPPIEHAVIDAGPIHYPSVDSNPVHLSCPAVEMLA 658
               N+ V+ VQT  ++   V  PSAPPI   +I+ GPIHYPS+DS+P+ +S   +E L 
Sbjct: 325 ----NSSVADVQTATDAQDSV--PSAPPIVDELIEDGPIHYPSIDSSPLDISSLPIENLP 378

Query: 659 ATADGIKEDDGACSSCVIYV*TP 727
               G K++DG  SSCVI +  P
Sbjct: 379 ENT-GEKKEDGGSSSCVICLDAP 400



 Score =  103 bits (258), Expect(3) = 4e-63
 Identities = 44/52 (84%), Positives = 47/52 (90%)
 Frame = +1

Query: 706 CNICLDAPVEGACIPCGHMAGCMTCLNEIKGKKWGCPVCRAEIDQVLRLYAV 861
           C ICLDAPVEGACIPCGHM GCM+CL EIK KKWGCPVCRA I+QV+RLYAV
Sbjct: 393 CVICLDAPVEGACIPCGHMVGCMSCLKEIKAKKWGCPVCRATINQVVRLYAV 444



 Score = 47.8 bits (112), Expect(3) = 4e-63
 Identities = 21/30 (70%), Positives = 25/30 (83%)
 Frame = +3

Query: 9   PFKLELAIYYSPQDAKPRTIFALWKANMEE 98
           P+KLELAIY   QDA+P TI ALWKAN+E+
Sbjct: 175 PYKLELAIYSRLQDAQPHTIIALWKANLEQ 204


>emb|CAN72662.1| hypothetical protein VITISV_013890 [Vitis vinifera]
          Length = 500

 Score =  158 bits (400), Expect(2) = 2e-62
 Identities = 99/213 (46%), Positives = 127/213 (59%), Gaps = 8/213 (3%)
 Frame = +2

Query: 113 ESWIKLAPANASDKEQLKWFCNACKGIHQVMNP-SFPFHTKGLDVAGTAPPASEDLELVM 289
           ++ IKLAP   SD +QL+WFCNACKGI Q M+P +F  + +   V  TAPP +EDLEL M
Sbjct: 246 QTQIKLAPEKKSDSQQLQWFCNACKGIPQAMHPPAFLHNAQTPAVPPTAPPTAEDLELAM 305

Query: 290 AINASLQSAIPKRPLALDTQPDLGPHTSTSWTGPTDITNHNGSAAL---GPPSPCKGCSS 460
           AINAS+QSA+ + P  LD+        STSW    +ITNHN   AL     P+  K  SS
Sbjct: 306 AINASIQSAMQEGPPLLDSPSSFENGASTSWNNSVNITNHNCPDALVAPVAPASSKASSS 365

Query: 461 EWEILGDVPNNNPVSVVQ--TPLESLTPVPA--PSAPPIEHAVIDAGPIHYPSVDSNPVH 628
           E  +    P+ N    +Q  T +  + PV A   SAPPI   V+D GP+ YPS+DS+PV 
Sbjct: 366 ECVVHEAGPSTNSTQHIQIETHIPDI-PVQASTASAPPIADEVVDDGPVQYPSIDSSPVD 424

Query: 629 LSCPAVEMLAATADGIKEDDGACSSCVIYV*TP 727
           L+ PA E  AA ++  KE  GA SSCVI +  P
Sbjct: 425 LTSPAFETSAAASEQSKE-GGAASSCVICLDAP 456



 Score =  107 bits (268), Expect(2) = 2e-62
 Identities = 44/52 (84%), Positives = 50/52 (96%)
 Frame = +1

Query: 706 CNICLDAPVEGACIPCGHMAGCMTCLNEIKGKKWGCPVCRAEIDQVLRLYAV 861
           C ICLDAP+EGACIPCGHMAGCM+CLNEIK KKWGCPVCRA+IDQV++LY+V
Sbjct: 449 CVICLDAPIEGACIPCGHMAGCMSCLNEIKAKKWGCPVCRAKIDQVVKLYSV 500


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