BLASTX nr result

ID: Paeonia25_contig00054139 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia25_contig00054139
         (252 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P80915.1|AMP1_MACIN RecName: Full=Antimicrobial peptide 1; Sh...    52   3e-06
pdb|1C01|A Chain A, Solution Structure Of Miamp1, A Plant Antimi...    52   3e-06
ref|XP_006843120.1| hypothetical protein AMTR_s00140p00096690 [A...    57   3e-06

>sp|P80915.1|AMP1_MACIN RecName: Full=Antimicrobial peptide 1; Short=AMP1; AltName:
           Full=MiAMP1; Flags: Precursor gi|2181943|emb|CAA71842.1|
           AMP1 [Macadamia integrifolia]
          Length = 102

 Score = 51.6 bits (122), Expect(2) = 3e-06
 Identities = 23/43 (53%), Positives = 27/43 (62%)
 Frame = -1

Query: 195 FSYTGQTARLYNTGNCLGGSVATLNGNARQCSGVGWRSINIQC 67
           FSYTGQTA LYN   C G +      +AR C+  GW+SI IQC
Sbjct: 60  FSYTGQTAALYNQAGCSGVAHTRFGSSARACNPFGWKSIFIQC 102



 Score = 25.0 bits (53), Expect(2) = 3e-06
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -3

Query: 244 YSNCGCSNLLYMGGY 200
           YS CGCS +   GGY
Sbjct: 44  YSKCGCSAIHQKGGY 58


>pdb|1C01|A Chain A, Solution Structure Of Miamp1, A Plant Antimicrobial
           Protein
          Length = 76

 Score = 51.6 bits (122), Expect(2) = 3e-06
 Identities = 23/43 (53%), Positives = 27/43 (62%)
 Frame = -1

Query: 195 FSYTGQTARLYNTGNCLGGSVATLNGNARQCSGVGWRSINIQC 67
           FSYTGQTA LYN   C G +      +AR C+  GW+SI IQC
Sbjct: 34  FSYTGQTAALYNQAGCSGVAHTRFGSSARACNPFGWKSIFIQC 76



 Score = 25.0 bits (53), Expect(2) = 3e-06
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -3

Query: 244 YSNCGCSNLLYMGGY 200
           YS CGCS +   GGY
Sbjct: 18  YSKCGCSAIHQKGGY 32


>ref|XP_006843120.1| hypothetical protein AMTR_s00140p00096690 [Amborella trichopoda]
           gi|548845330|gb|ERN04795.1| hypothetical protein
           AMTR_s00140p00096690 [Amborella trichopoda]
          Length = 104

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 26/44 (59%), Positives = 27/44 (61%)
 Frame = -1

Query: 198 QFSYTGQTARLYNTGNCLGGSVATLNGNARQCSGVGWRSINIQC 67
           QF YTGQTA LYN GNC G +       A  CS  GWRSI IQC
Sbjct: 61  QFVYTGQTAALYNQGNCQGVAHTRFGSGASSCSAFGWRSIFIQC 104


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