BLASTX nr result

ID: Paeonia25_contig00050360 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia25_contig00050360
         (387 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa]               57   3e-06

>gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa]
          Length = 1384

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 32/61 (52%), Positives = 35/61 (57%), Gaps = 15/61 (24%)
 Frame = +2

Query: 2    KHLEVDYHYI---------------TKDQVADIFTKGLSRQRFQMLQSKLMVLLLPIRLW 136
            KH+EVDYHY+               T DQ ADIFTKGLS QRFQ L SKL V   P+ L 
Sbjct: 1314 KHIEVDYHYVRDKVVRQELAVSYVSTADQTADIFTKGLSTQRFQFLASKLPVRARPLSLR 1373

Query: 137  G 139
            G
Sbjct: 1374 G 1374


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