BLASTX nr result
ID: Paeonia25_contig00049372
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Paeonia25_contig00049372
(463 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006469504.1| PREDICTED: zinc finger CCCH domain-containin... 167 1e-39
ref|XP_006469503.1| PREDICTED: zinc finger CCCH domain-containin... 167 1e-39
ref|XP_006469502.1| PREDICTED: zinc finger CCCH domain-containin... 167 1e-39
ref|XP_006469501.1| PREDICTED: zinc finger CCCH domain-containin... 167 1e-39
ref|XP_007049320.1| CCCH-type zinc fingerfamily protein with RNA... 162 3e-38
ref|XP_007049317.1| CCCH-type zinc fingerfamily protein with RNA... 162 3e-38
ref|XP_002270665.1| PREDICTED: zinc finger CCCH domain-containin... 158 8e-37
ref|XP_007213859.1| hypothetical protein PRUPE_ppa019338mg [Prun... 152 6e-35
ref|XP_002534335.1| RNA binding protein, putative [Ricinus commu... 152 6e-35
ref|XP_007020606.1| RNA binding protein, putative isoform 3, par... 149 4e-34
ref|XP_007020605.1| RNA binding protein, putative isoform 2 [The... 149 4e-34
ref|XP_007020604.1| RNA binding protein, putative isoform 1 [The... 149 4e-34
ref|XP_006452534.1| hypothetical protein CICLE_v10007876mg [Citr... 141 8e-32
ref|XP_006452532.1| hypothetical protein CICLE_v10007876mg [Citr... 141 8e-32
ref|XP_002529054.1| RNA binding protein, putative [Ricinus commu... 140 2e-31
ref|XP_002320513.1| RNA recognition motif-containing family prot... 139 5e-31
ref|XP_004294464.1| PREDICTED: zinc finger CCCH domain-containin... 138 9e-31
gb|EXC34884.1| Zinc finger CCCH domain-containing protein 18 [Mo... 132 7e-29
ref|XP_007215321.1| hypothetical protein PRUPE_ppa003564mg [Prun... 130 2e-28
ref|XP_006447767.1| hypothetical protein CICLE_v10014902mg [Citr... 125 8e-27
>ref|XP_006469504.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like
isoform X4 [Citrus sinensis]
Length = 578
Score = 167 bits (423), Expect = 1e-39
Identities = 93/177 (52%), Positives = 116/177 (65%), Gaps = 24/177 (13%)
Frame = -1
Query: 460 MIRLAFSSDQVLYKWINTAKLELAKPGLSGP-ISPPMKPAPISNIPPQFSPFSP------ 302
MIRLAFS D ++Y IN AK++L GL P +SPP+ PA ++++P QF+PFSP
Sbjct: 39 MIRLAFSPDHLIYSLINEAKMKL---GLGKPTVSPPISPASVADLPLQFAPFSPASTRPV 95
Query: 301 --PAKFHVP-TPYWDPQLPMENNQ-----DFVPVRYPDE------LQNQAQFLSLDDQFE 164
PA +P+WDPQ+ + Q +FV Y D LQNQ QFL+L+DQF+
Sbjct: 96 SSPASMRAAASPFWDPQMAADQQQQVNSIEFVQPGYSDTAAEDFCLQNQMQFLTLEDQFD 155
Query: 163 LVNPVLSGFSNEYYYPEVAL---RGTRRSPSLHEFPVKSCHYFNKGFCKHGSNCRYF 2
VN V S FS+ Y+YPE AL R +RRSPSL EFPVK CHYFNKGFCKHG+NCRYF
Sbjct: 156 SVNSVNSDFSSSYFYPEPALGHVRTSRRSPSLPEFPVKVCHYFNKGFCKHGNNCRYF 212
>ref|XP_006469503.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like
isoform X3 [Citrus sinensis]
Length = 579
Score = 167 bits (423), Expect = 1e-39
Identities = 93/177 (52%), Positives = 116/177 (65%), Gaps = 24/177 (13%)
Frame = -1
Query: 460 MIRLAFSSDQVLYKWINTAKLELAKPGLSGP-ISPPMKPAPISNIPPQFSPFSP------ 302
MIRLAFS D ++Y IN AK++L GL P +SPP+ PA ++++P QF+PFSP
Sbjct: 39 MIRLAFSPDHLIYSLINEAKMKL---GLGKPTVSPPISPASVADLPLQFAPFSPASTRPV 95
Query: 301 --PAKFHVP-TPYWDPQLPMENNQ-----DFVPVRYPDE------LQNQAQFLSLDDQFE 164
PA +P+WDPQ+ + Q +FV Y D LQNQ QFL+L+DQF+
Sbjct: 96 SSPASMRAAASPFWDPQMAADQQQQVNSIEFVQPGYSDTAAEDFCLQNQMQFLTLEDQFD 155
Query: 163 LVNPVLSGFSNEYYYPEVAL---RGTRRSPSLHEFPVKSCHYFNKGFCKHGSNCRYF 2
VN V S FS+ Y+YPE AL R +RRSPSL EFPVK CHYFNKGFCKHG+NCRYF
Sbjct: 156 SVNSVNSDFSSSYFYPEPALGHVRTSRRSPSLPEFPVKVCHYFNKGFCKHGNNCRYF 212
>ref|XP_006469502.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like
isoform X2 [Citrus sinensis]
Length = 581
Score = 167 bits (423), Expect = 1e-39
Identities = 93/177 (52%), Positives = 116/177 (65%), Gaps = 24/177 (13%)
Frame = -1
Query: 460 MIRLAFSSDQVLYKWINTAKLELAKPGLSGP-ISPPMKPAPISNIPPQFSPFSP------ 302
MIRLAFS D ++Y IN AK++L GL P +SPP+ PA ++++P QF+PFSP
Sbjct: 39 MIRLAFSPDHLIYSLINEAKMKL---GLGKPTVSPPISPASVADLPLQFAPFSPASTRPV 95
Query: 301 --PAKFHVP-TPYWDPQLPMENNQ-----DFVPVRYPDE------LQNQAQFLSLDDQFE 164
PA +P+WDPQ+ + Q +FV Y D LQNQ QFL+L+DQF+
Sbjct: 96 SSPASMRAAASPFWDPQMAADQQQQVNSIEFVQPGYSDTAAEDFCLQNQMQFLTLEDQFD 155
Query: 163 LVNPVLSGFSNEYYYPEVAL---RGTRRSPSLHEFPVKSCHYFNKGFCKHGSNCRYF 2
VN V S FS+ Y+YPE AL R +RRSPSL EFPVK CHYFNKGFCKHG+NCRYF
Sbjct: 156 SVNSVNSDFSSSYFYPEPALGHVRTSRRSPSLPEFPVKVCHYFNKGFCKHGNNCRYF 212
>ref|XP_006469501.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like
isoform X1 [Citrus sinensis]
Length = 582
Score = 167 bits (423), Expect = 1e-39
Identities = 93/177 (52%), Positives = 116/177 (65%), Gaps = 24/177 (13%)
Frame = -1
Query: 460 MIRLAFSSDQVLYKWINTAKLELAKPGLSGP-ISPPMKPAPISNIPPQFSPFSP------ 302
MIRLAFS D ++Y IN AK++L GL P +SPP+ PA ++++P QF+PFSP
Sbjct: 39 MIRLAFSPDHLIYSLINEAKMKL---GLGKPTVSPPISPASVADLPLQFAPFSPASTRPV 95
Query: 301 --PAKFHVP-TPYWDPQLPMENNQ-----DFVPVRYPDE------LQNQAQFLSLDDQFE 164
PA +P+WDPQ+ + Q +FV Y D LQNQ QFL+L+DQF+
Sbjct: 96 SSPASMRAAASPFWDPQMAADQQQQVNSIEFVQPGYSDTAAEDFCLQNQMQFLTLEDQFD 155
Query: 163 LVNPVLSGFSNEYYYPEVAL---RGTRRSPSLHEFPVKSCHYFNKGFCKHGSNCRYF 2
VN V S FS+ Y+YPE AL R +RRSPSL EFPVK CHYFNKGFCKHG+NCRYF
Sbjct: 156 SVNSVNSDFSSSYFYPEPALGHVRTSRRSPSLPEFPVKVCHYFNKGFCKHGNNCRYF 212
>ref|XP_007049320.1| CCCH-type zinc fingerfamily protein with RNA-binding domain,
putative isoform 4, partial [Theobroma cacao]
gi|508701581|gb|EOX93477.1| CCCH-type zinc fingerfamily
protein with RNA-binding domain, putative isoform 4,
partial [Theobroma cacao]
Length = 430
Score = 162 bits (411), Expect = 3e-38
Identities = 92/175 (52%), Positives = 111/175 (63%), Gaps = 22/175 (12%)
Frame = -1
Query: 460 MIRLAFSSDQVLYKWINTAKLELA--KPGLSGPISPPMK-PAPISNIPPQFSPFSP---- 302
MIRLAF SD +L IN AK EL+ K +S PISP P+P++++P QF+P+SP
Sbjct: 39 MIRLAFCSDTLLLSLINKAKSELSLNKSAVSVPISPSQVIPSPVTDLPVQFTPYSPASSC 98
Query: 301 ----PAKFHVPTPYWDPQLPME---NNQDFVPVRYPDE------LQNQAQFLSLDDQFEL 161
PA +P+WDPQ+ E NN +FVP Y D LQNQ FL++ DQ E
Sbjct: 99 TVSTPATIRASSPFWDPQVTAEQHVNNLEFVPPGYSDAVAEDYGLQNQMHFLNMGDQLES 158
Query: 160 VNPVLSGFSNEYYYPEVAL--RGTRRSPSLHEFPVKSCHYFNKGFCKHGSNCRYF 2
N V S F + YYY E AL R +RRSPSL EFPVK CHYFNKGFCKHG+NCRYF
Sbjct: 159 ANSVSSEFLSNYYYSEPALGVRTSRRSPSLPEFPVKICHYFNKGFCKHGNNCRYF 213
>ref|XP_007049317.1| CCCH-type zinc fingerfamily protein with RNA-binding domain,
putative isoform 1 [Theobroma cacao]
gi|590712174|ref|XP_007049318.1| CCCH-type zinc
fingerfamily protein with RNA-binding domain, putative
isoform 1 [Theobroma cacao]
gi|590712177|ref|XP_007049319.1| CCCH-type zinc
fingerfamily protein with RNA-binding domain, putative
isoform 1 [Theobroma cacao] gi|508701578|gb|EOX93474.1|
CCCH-type zinc fingerfamily protein with RNA-binding
domain, putative isoform 1 [Theobroma cacao]
gi|508701579|gb|EOX93475.1| CCCH-type zinc fingerfamily
protein with RNA-binding domain, putative isoform 1
[Theobroma cacao] gi|508701580|gb|EOX93476.1| CCCH-type
zinc fingerfamily protein with RNA-binding domain,
putative isoform 1 [Theobroma cacao]
Length = 545
Score = 162 bits (411), Expect = 3e-38
Identities = 92/175 (52%), Positives = 111/175 (63%), Gaps = 22/175 (12%)
Frame = -1
Query: 460 MIRLAFSSDQVLYKWINTAKLELA--KPGLSGPISPPMK-PAPISNIPPQFSPFSP---- 302
MIRLAF SD +L IN AK EL+ K +S PISP P+P++++P QF+P+SP
Sbjct: 39 MIRLAFCSDTLLLSLINKAKSELSLNKSAVSVPISPSQVIPSPVTDLPVQFTPYSPASSC 98
Query: 301 ----PAKFHVPTPYWDPQLPME---NNQDFVPVRYPDE------LQNQAQFLSLDDQFEL 161
PA +P+WDPQ+ E NN +FVP Y D LQNQ FL++ DQ E
Sbjct: 99 TVSTPATIRASSPFWDPQVTAEQHVNNLEFVPPGYSDAVAEDYGLQNQMHFLNMGDQLES 158
Query: 160 VNPVLSGFSNEYYYPEVAL--RGTRRSPSLHEFPVKSCHYFNKGFCKHGSNCRYF 2
N V S F + YYY E AL R +RRSPSL EFPVK CHYFNKGFCKHG+NCRYF
Sbjct: 159 ANSVSSEFLSNYYYSEPALGVRTSRRSPSLPEFPVKICHYFNKGFCKHGNNCRYF 213
>ref|XP_002270665.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like
[Vitis vinifera]
Length = 572
Score = 158 bits (399), Expect = 8e-37
Identities = 91/175 (52%), Positives = 113/175 (64%), Gaps = 22/175 (12%)
Frame = -1
Query: 460 MIRLAFSSDQVLYKWINTAKLEL---AKPGLSGPISPP-MKPAPISNIPPQFSPFSPPAK 293
MIR AF+SD + IN AK EL +KP +S PISPP + P+P+S++P QF+PFSP +
Sbjct: 39 MIRRAFTSDNAIQCLINKAKAELGLSSKPAVSSPISPPQVNPSPVSDLPLQFTPFSPASA 98
Query: 292 FHVPTP-----YWDPQLPMENNQ-----DFVPVRYPDEL------QNQAQFLSLDDQFEL 161
P+P YWDPQ+ + Q DFVP Y D L Q+Q FL+++DQ E
Sbjct: 99 RPFPSPRPGNSYWDPQVNGDQQQVHKLGDFVPQGYSDSLPDDFRLQSQIHFLAMEDQLE- 157
Query: 160 VNPVLSGFSNEYYYPEVAL--RGTRRSPSLHEFPVKSCHYFNKGFCKHGSNCRYF 2
N V S FS YYY E AL R +RRSPSL EFP+K CHYFNKGFCKHG++CRYF
Sbjct: 158 -NSVGSEFSGSYYYAEQALNTRISRRSPSLPEFPLKVCHYFNKGFCKHGNSCRYF 211
>ref|XP_007213859.1| hypothetical protein PRUPE_ppa019338mg [Prunus persica]
gi|462409724|gb|EMJ15058.1| hypothetical protein
PRUPE_ppa019338mg [Prunus persica]
Length = 564
Score = 152 bits (383), Expect = 6e-35
Identities = 82/166 (49%), Positives = 107/166 (64%), Gaps = 13/166 (7%)
Frame = -1
Query: 460 MIRLAFSSDQVLYKWINTAKLEL---AKPGLSGPISPPMKP---APISNIPPQFSPFSPP 299
M RLA + + ++++ I AK EL A ++ PISP + P A +P PFS P
Sbjct: 39 MARLAMAPEHLIHQVIVKAKTELQQLAAKSVASPISPSLNPVTGAFAPYLPVSSRPFSSP 98
Query: 298 AKFHVPTPYWDPQLPMENNQDFVPVRYPD---ELQNQAQFLSLDDQFELVNPVLSGFSNE 128
A VPT +WD QL + + DF+P+ YPD ELQNQAQFLSL+DQ E +N +SGFSN+
Sbjct: 99 AAIRVPTAFWDAQLVAKQSPDFMPLGYPDSIAELQNQAQFLSLEDQIEPLNSGISGFSND 158
Query: 127 YY----YPEVALRGTRRSPSLHEFPVKSCHYFNKGFCKHGSNCRYF 2
YY +++R RR S+ EFPVK CHYFNKGFCKHGS+CRY+
Sbjct: 159 YYRDAEIDNLSVRTGRRFSSVTEFPVKICHYFNKGFCKHGSSCRYY 204
>ref|XP_002534335.1| RNA binding protein, putative [Ricinus communis]
gi|223525472|gb|EEF28048.1| RNA binding protein,
putative [Ricinus communis]
Length = 578
Score = 152 bits (383), Expect = 6e-35
Identities = 87/176 (49%), Positives = 108/176 (61%), Gaps = 24/176 (13%)
Frame = -1
Query: 460 MIRLAFSSDQVLYKWINTAKLELA--KPGLSGPISPP-MKPAPISNIPPQFSPFSPPAKF 290
MIRLAFS D ++Y I AK +L KP LS PISP + +P+S+IP QF+PFSP +
Sbjct: 39 MIRLAFSPDNLIYSLITKAKSDLGLNKPALSAPISPSQVNTSPVSDIPLQFTPFSPASAH 98
Query: 289 HVPTP---------YWDPQLPMENNQ----DFVPVRYPD------ELQNQAQFLSLDDQF 167
+ +P YWD Q+ + Q DF Y D LQN QFL+LDDQF
Sbjct: 99 PISSPAASRRTASAYWDAQVTGDQQQVPNLDFGSPGYSDTVPEDYRLQNHMQFLTLDDQF 158
Query: 166 ELVNPVLSGFSNEYYYPEVAL--RGTRRSPSLHEFPVKSCHYFNKGFCKHGSNCRY 5
E + V S FS+ Y+Y E AL R RRSPSL EFP+K CHYF+KG+CKHG+NCRY
Sbjct: 159 EFAHSVNSDFSSNYFYSEPALGPRTNRRSPSLPEFPLKICHYFSKGYCKHGNNCRY 214
>ref|XP_007020606.1| RNA binding protein, putative isoform 3, partial [Theobroma cacao]
gi|508720234|gb|EOY12131.1| RNA binding protein,
putative isoform 3, partial [Theobroma cacao]
Length = 507
Score = 149 bits (376), Expect = 4e-34
Identities = 83/173 (47%), Positives = 105/173 (60%), Gaps = 20/173 (11%)
Frame = -1
Query: 460 MIRLAFSSDQVLYKWINTAKLELAKPGL---SGPISPPMKPAPISNIPPQFSPFSPPAK- 293
M++LA D V+ + I AK EL + L S PISP M AP S P QF+ FSPP
Sbjct: 39 MVQLAMCPDMVIQEVIYKAKAELQQLPLKSGSPPISPSMNSAPGSEFPSQFTSFSPPVSS 98
Query: 292 --------FHVPTPYWDPQLPMENNQDFVPVRYPD---ELQNQAQFLSLDDQFELVNPVL 146
F V +PYW+ QL ++N DF+P Y D ELQ+Q+Q LSL++Q E +N
Sbjct: 99 RPFLSPRSFQVTSPYWEQQLAAKHNSDFMPSAYLDSASELQSQSQLLSLEEQIESLNLGN 158
Query: 145 SGFSNEYYYPEVAL-----RGTRRSPSLHEFPVKSCHYFNKGFCKHGSNCRYF 2
GFSN+Y Y + L R RR +L +FPVK+CHYFNKG+CKHGSNCRYF
Sbjct: 159 GGFSNDYCYSDAVLGNLGVRTERRHQNLPDFPVKTCHYFNKGYCKHGSNCRYF 211
>ref|XP_007020605.1| RNA binding protein, putative isoform 2 [Theobroma cacao]
gi|508720233|gb|EOY12130.1| RNA binding protein,
putative isoform 2 [Theobroma cacao]
Length = 569
Score = 149 bits (376), Expect = 4e-34
Identities = 83/173 (47%), Positives = 105/173 (60%), Gaps = 20/173 (11%)
Frame = -1
Query: 460 MIRLAFSSDQVLYKWINTAKLELAKPGL---SGPISPPMKPAPISNIPPQFSPFSPPAK- 293
M++LA D V+ + I AK EL + L S PISP M AP S P QF+ FSPP
Sbjct: 39 MVQLAMCPDMVIQEVIYKAKAELQQLPLKSGSPPISPSMNSAPGSEFPSQFTSFSPPVSS 98
Query: 292 --------FHVPTPYWDPQLPMENNQDFVPVRYPD---ELQNQAQFLSLDDQFELVNPVL 146
F V +PYW+ QL ++N DF+P Y D ELQ+Q+Q LSL++Q E +N
Sbjct: 99 RPFLSPRSFQVTSPYWEQQLAAKHNSDFMPSAYLDSASELQSQSQLLSLEEQIESLNLGN 158
Query: 145 SGFSNEYYYPEVAL-----RGTRRSPSLHEFPVKSCHYFNKGFCKHGSNCRYF 2
GFSN+Y Y + L R RR +L +FPVK+CHYFNKG+CKHGSNCRYF
Sbjct: 159 GGFSNDYCYSDAVLGNLGVRTERRHQNLPDFPVKTCHYFNKGYCKHGSNCRYF 211
>ref|XP_007020604.1| RNA binding protein, putative isoform 1 [Theobroma cacao]
gi|508720232|gb|EOY12129.1| RNA binding protein,
putative isoform 1 [Theobroma cacao]
Length = 568
Score = 149 bits (376), Expect = 4e-34
Identities = 83/173 (47%), Positives = 105/173 (60%), Gaps = 20/173 (11%)
Frame = -1
Query: 460 MIRLAFSSDQVLYKWINTAKLELAKPGL---SGPISPPMKPAPISNIPPQFSPFSPPAK- 293
M++LA D V+ + I AK EL + L S PISP M AP S P QF+ FSPP
Sbjct: 39 MVQLAMCPDMVIQEVIYKAKAELQQLPLKSGSPPISPSMNSAPGSEFPSQFTSFSPPVSS 98
Query: 292 --------FHVPTPYWDPQLPMENNQDFVPVRYPD---ELQNQAQFLSLDDQFELVNPVL 146
F V +PYW+ QL ++N DF+P Y D ELQ+Q+Q LSL++Q E +N
Sbjct: 99 RPFLSPRSFQVTSPYWEQQLAAKHNSDFMPSAYLDSASELQSQSQLLSLEEQIESLNLGN 158
Query: 145 SGFSNEYYYPEVAL-----RGTRRSPSLHEFPVKSCHYFNKGFCKHGSNCRYF 2
GFSN+Y Y + L R RR +L +FPVK+CHYFNKG+CKHGSNCRYF
Sbjct: 159 GGFSNDYCYSDAVLGNLGVRTERRHQNLPDFPVKTCHYFNKGYCKHGSNCRYF 211
>ref|XP_006452534.1| hypothetical protein CICLE_v10007876mg [Citrus clementina]
gi|567921060|ref|XP_006452536.1| hypothetical protein
CICLE_v10007876mg [Citrus clementina]
gi|567921062|ref|XP_006452537.1| hypothetical protein
CICLE_v10007876mg [Citrus clementina]
gi|557555760|gb|ESR65774.1| hypothetical protein
CICLE_v10007876mg [Citrus clementina]
gi|557555762|gb|ESR65776.1| hypothetical protein
CICLE_v10007876mg [Citrus clementina]
gi|557555763|gb|ESR65777.1| hypothetical protein
CICLE_v10007876mg [Citrus clementina]
Length = 547
Score = 141 bits (356), Expect = 8e-32
Identities = 86/170 (50%), Positives = 107/170 (62%), Gaps = 17/170 (10%)
Frame = -1
Query: 460 MIRLAFSSDQVLYKWINTAKLEL---AKPGLSGPISPPMKPAPISNIPPQFSPFSP---- 302
MI LA S D V+ + + AK EL A S PISP M +P++ + QF+PFS
Sbjct: 36 MIHLAMSPDVVIQEVVYKAKAELQQLAMKSASSPISPSMN-SPVNEVSFQFNPFSSRPPV 94
Query: 301 -PAKFHVPTPYWDPQLPMENNQDFVPVRYPD---ELQNQAQFLSLDDQFELVNPVLSGFS 134
PA VP+ YWD Q+ +NN DFV + Y D ELQ+Q QFLSL+DQ E VN +GFS
Sbjct: 95 SPAGCRVPS-YWDHQVTNKNNSDFVALGYSDSINELQSQTQFLSLEDQMEHVNLGNTGFS 153
Query: 133 NEYYYPEVAL-----RGTRRSPSLH-EFPVKSCHYFNKGFCKHGSNCRYF 2
++ YY + AL R RR SL+ E PVK+CHYFNKGFCKHGSNCRY+
Sbjct: 154 SDCYYSDAALSNLGARAGRRYQSLNAELPVKTCHYFNKGFCKHGSNCRYY 203
>ref|XP_006452532.1| hypothetical protein CICLE_v10007876mg [Citrus clementina]
gi|567921054|ref|XP_006452533.1| hypothetical protein
CICLE_v10007876mg [Citrus clementina]
gi|567921058|ref|XP_006452535.1| hypothetical protein
CICLE_v10007876mg [Citrus clementina]
gi|568841990|ref|XP_006474936.1| PREDICTED: zinc finger
CCCH domain-containing protein 18-like isoform X1
[Citrus sinensis] gi|568841992|ref|XP_006474937.1|
PREDICTED: zinc finger CCCH domain-containing protein
18-like isoform X2 [Citrus sinensis]
gi|557555758|gb|ESR65772.1| hypothetical protein
CICLE_v10007876mg [Citrus clementina]
gi|557555759|gb|ESR65773.1| hypothetical protein
CICLE_v10007876mg [Citrus clementina]
gi|557555761|gb|ESR65775.1| hypothetical protein
CICLE_v10007876mg [Citrus clementina]
Length = 565
Score = 141 bits (356), Expect = 8e-32
Identities = 86/170 (50%), Positives = 107/170 (62%), Gaps = 17/170 (10%)
Frame = -1
Query: 460 MIRLAFSSDQVLYKWINTAKLEL---AKPGLSGPISPPMKPAPISNIPPQFSPFSP---- 302
MI LA S D V+ + + AK EL A S PISP M +P++ + QF+PFS
Sbjct: 36 MIHLAMSPDVVIQEVVYKAKAELQQLAMKSASSPISPSMN-SPVNEVSFQFNPFSSRPPV 94
Query: 301 -PAKFHVPTPYWDPQLPMENNQDFVPVRYPD---ELQNQAQFLSLDDQFELVNPVLSGFS 134
PA VP+ YWD Q+ +NN DFV + Y D ELQ+Q QFLSL+DQ E VN +GFS
Sbjct: 95 SPAGCRVPS-YWDHQVTNKNNSDFVALGYSDSINELQSQTQFLSLEDQMEHVNLGNTGFS 153
Query: 133 NEYYYPEVAL-----RGTRRSPSLH-EFPVKSCHYFNKGFCKHGSNCRYF 2
++ YY + AL R RR SL+ E PVK+CHYFNKGFCKHGSNCRY+
Sbjct: 154 SDCYYSDAALSNLGARAGRRYQSLNAELPVKTCHYFNKGFCKHGSNCRYY 203
>ref|XP_002529054.1| RNA binding protein, putative [Ricinus communis]
gi|223531534|gb|EEF33365.1| RNA binding protein,
putative [Ricinus communis]
Length = 551
Score = 140 bits (352), Expect = 2e-31
Identities = 82/173 (47%), Positives = 102/173 (58%), Gaps = 20/173 (11%)
Frame = -1
Query: 460 MIRLAFSSDQVLYKWINTAKLELAKPGLSG---PISPPMKPAP-ISNIPPQFSPFSP--- 302
MI LA S D V+ I AK EL + L P+SP M P +S QF FSP
Sbjct: 39 MINLAMSPDVVIQDVIYKAKAELNQLALKSAATPLSPSMNSPPAVSEFSSQFRAFSPVSS 98
Query: 301 -----PAKFHVPTPYWDPQLPMENNQDFVPVRYPD---ELQNQAQFLSLDDQFELVNPVL 146
P F VP+ YW+ Q+ +++ DFVP+ Y D ELQNQAQFLSL+DQ E VN
Sbjct: 99 RSYLSPQHFRVPSTYWESQVASKHSSDFVPMTYQDSMTELQNQAQFLSLEDQLESVNLGN 158
Query: 145 SGFSNEYYYPEVAL-----RGTRRSPSLHEFPVKSCHYFNKGFCKHGSNCRYF 2
+GF ++ +Y + AL R RR SL+E +K CHYFNKG+CKHGSNCRYF
Sbjct: 159 AGFPSDLFYSDAALGSFRARAGRRYSSLNENSMKICHYFNKGYCKHGSNCRYF 211
>ref|XP_002320513.1| RNA recognition motif-containing family protein [Populus
trichocarpa] gi|222861286|gb|EEE98828.1| RNA recognition
motif-containing family protein [Populus trichocarpa]
Length = 554
Score = 139 bits (349), Expect = 5e-31
Identities = 83/166 (50%), Positives = 100/166 (60%), Gaps = 13/166 (7%)
Frame = -1
Query: 460 MIRLAFSSDQVLYKWINTAKLELA--KPGLSGPISPP-MKPAPISNIPPQF--------S 314
MIRLAFS D ++Y I+ AK +L K + PISP + PAP+S++ QF
Sbjct: 39 MIRLAFSPDNLIYATISKAKSDLGLNKTPVPNPISPSQVNPAPVSDVHLQFIPNTAVSSH 98
Query: 313 PFSPPAKFHVPTPYWDPQLPMENNQDFVPVRYPDELQNQAQFLSLDDQFELVNPVLSGFS 134
P S P K +WD Q+ D+ LQNQ QFL+ DDQ E VN S FS
Sbjct: 99 PISSPIKIRTAGSFWDAQVT-----DY-------RLQNQMQFLTSDDQLEFVN---SDFS 143
Query: 133 NEYYYPEVAL--RGTRRSPSLHEFPVKSCHYFNKGFCKHGSNCRYF 2
+ Y+YPE AL R +RRSPSL EFPVK CHYFNKGFCKHG+NCRYF
Sbjct: 144 SSYFYPEPALGPRTSRRSPSLPEFPVKICHYFNKGFCKHGNNCRYF 189
>ref|XP_004294464.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like
[Fragaria vesca subsp. vesca]
Length = 556
Score = 138 bits (347), Expect = 9e-31
Identities = 80/164 (48%), Positives = 105/164 (64%), Gaps = 11/164 (6%)
Frame = -1
Query: 460 MIRLAFSSDQVLYKWINTAKLELAKPGLSGPISPPMKPAPISNIPPQFSPFS--PPAKFH 287
M RLA + D + ++ + AK +L + L+ +P M P + P FSP S PPA F
Sbjct: 40 MARLALAPDHLFHQVVLKAKADLLR--LASKSAPSMNPPSAAFAP--FSPVSSTPPAAFR 95
Query: 286 VPTPYWDPQLPMENNQDFVPVRYPD---ELQNQAQFLSLDDQFELVNPVLSGFSNEYYYP 116
VPTP WDPQL + Q+ +P + D ELQNQA+FLSL+DQ E +N +SG+ +EYYY
Sbjct: 96 VPTPCWDPQLV--SKQNMMPFEFSDPVEELQNQARFLSLEDQMEPLNSGISGYPDEYYYH 153
Query: 115 EVALRGT------RRSPSLHEFPVKSCHYFNKGFCKHGSNCRYF 2
+ AL G+ RR SL EFPVK CHYF+KGFCKHGS+CRY+
Sbjct: 154 DAALGGSLSPRPGRRFSSL-EFPVKICHYFSKGFCKHGSSCRYY 196
>gb|EXC34884.1| Zinc finger CCCH domain-containing protein 18 [Morus notabilis]
Length = 557
Score = 132 bits (331), Expect = 7e-29
Identities = 76/159 (47%), Positives = 94/159 (59%), Gaps = 6/159 (3%)
Frame = -1
Query: 460 MIRLAFSSDQVLYKWINTAKLEL---AKPGLSGPISPP-MKPAPISNIPPQFSPFSPPAK 293
MIRLAFS D +++ I AK EL +K + PISP + P+ +IP QF ++P +
Sbjct: 39 MIRLAFSPDNLMHSLITRAKTELGLSSKSPVPAPISPSQVNQIPVLDIPLQFQSYTPVSA 98
Query: 292 FHVPTPYWDPQLPMENNQDFVPVRYPDELQNQAQFLSLDDQFELVNPVLSGFSNEYYYPE 113
P YWD + N LQNQ LSL+D E V S FS+ YYYPE
Sbjct: 99 R--PNYYWDHNAEVINQGYVDSTAENFHLQNQLHLLSLEDPLESACSVSSDFSSGYYYPE 156
Query: 112 VAL--RGTRRSPSLHEFPVKSCHYFNKGFCKHGSNCRYF 2
+AL R +RRSPSL EFPVK CHYFNKG CKHG+NC+YF
Sbjct: 157 LALGLRASRRSPSLSEFPVKVCHYFNKGHCKHGTNCKYF 195
>ref|XP_007215321.1| hypothetical protein PRUPE_ppa003564mg [Prunus persica]
gi|462411471|gb|EMJ16520.1| hypothetical protein
PRUPE_ppa003564mg [Prunus persica]
Length = 565
Score = 130 bits (327), Expect = 2e-28
Identities = 83/176 (47%), Positives = 98/176 (55%), Gaps = 23/176 (13%)
Frame = -1
Query: 460 MIRLAFSSDQVLYKWINTAKLELA--KPGLSGPISPP-MKPAPISNIPPQFSPFSP---- 302
MIRLAFS D ++ IN AK EL K +S PISP + P+S+ P QF+P++P
Sbjct: 39 MIRLAFSPDNLIQSLINKAKTELGLCKLAVSAPISPSQVNQVPVSDPPLQFTPYTPNLTR 98
Query: 301 ----PAKFHVPTPYWDPQLPMEN----NQDFVPVRYPDE------LQNQAQFLSLDDQFE 164
P P+ DPQLP + N +FVP Y D LQNQ QFL
Sbjct: 99 PISSPTPLGAVNPFRDPQLPGDQQPLQNVEFVPPGYSDSAIEDYRLQNQMQFLP------ 152
Query: 163 LVNPVLSGFSNEYYYPEVAL--RGTRRSPSLHEFPVKSCHYFNKGFCKHGSNCRYF 2
FS+ Y Y E AL R +RRSPSL EFP+K CHYFNKGFCKHGSNCRYF
Sbjct: 153 -------DFSSNYCYHEPALSVRTSRRSPSLPEFPLKVCHYFNKGFCKHGSNCRYF 201
>ref|XP_006447767.1| hypothetical protein CICLE_v10014902mg [Citrus clementina]
gi|557550378|gb|ESR61007.1| hypothetical protein
CICLE_v10014902mg [Citrus clementina]
Length = 524
Score = 125 bits (313), Expect = 8e-27
Identities = 66/119 (55%), Positives = 78/119 (65%), Gaps = 15/119 (12%)
Frame = -1
Query: 313 PFSPPAKFHVP-TPYWDPQLPMENNQ-----DFVPVRYPDE------LQNQAQFLSLDDQ 170
P S PA +P+WDPQ+ + Q +FV Y D LQNQ QFL+L+DQ
Sbjct: 39 PVSSPASMRAAASPFWDPQMAADQQQQVNSIEFVQPGYSDTAAEDFCLQNQMQFLTLEDQ 98
Query: 169 FELVNPVLSGFSNEYYYPEVAL---RGTRRSPSLHEFPVKSCHYFNKGFCKHGSNCRYF 2
F+ VN V S FS+ Y+YPE AL R +RRSPSL EFPVK CHYFNKGFCKHG+NCRYF
Sbjct: 99 FDSVNSVNSDFSSSYFYPEPALGHVRTSRRSPSLPEFPVKVCHYFNKGFCKHGNNCRYF 157