BLASTX nr result

ID: Paeonia25_contig00048769 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia25_contig00048769
         (311 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264009.1| PREDICTED: replication protein A 70 kDa DNA-...    75   9e-12
emb|CAN82475.1| hypothetical protein VITISV_038295 [Vitis vinifera]    75   9e-12
ref|XP_002519884.1| replication factor A 1, rfa1, putative [Rici...    73   4e-11
ref|XP_007211093.1| hypothetical protein PRUPE_ppa001396mg [Prun...    57   3e-06

>ref|XP_002264009.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
           [Vitis vinifera]
          Length = 882

 Score = 75.1 bits (183), Expect = 9e-12
 Identities = 46/121 (38%), Positives = 62/121 (51%), Gaps = 23/121 (19%)
 Frame = -3

Query: 303 AGGLSP------PAQPSVSRPNVAMGSQQ----------------LPRTEAPF-GSSFPR 193
           AGG++P      P   SV  P   +G+ Q                +    +P+  +SF  
Sbjct: 124 AGGVAPIARTSAPMPSSVDHPGTVLGNPQSFGNSSLTGGSAAKPNMAGVASPYHANSFSS 183

Query: 192 NSGSGGFAGTSPPPIHSKFEPAAGIRGSVPFSASYNDQNTGLLNNRVEVSRAPSSYGCPQ 13
           N  SG FAGT+ PP++SK +P AGI  S   + SY DQ+TG  NN+VEVSRAP +    Q
Sbjct: 184 NPDSGRFAGTNAPPMYSKMQPDAGIPASAASTGSYGDQSTGFRNNKVEVSRAPYNAPARQ 243

Query: 12  P 10
           P
Sbjct: 244 P 244


>emb|CAN82475.1| hypothetical protein VITISV_038295 [Vitis vinifera]
          Length = 882

 Score = 75.1 bits (183), Expect = 9e-12
 Identities = 46/121 (38%), Positives = 62/121 (51%), Gaps = 23/121 (19%)
 Frame = -3

Query: 303 AGGLSP------PAQPSVSRPNVAMGSQQ----------------LPRTEAPF-GSSFPR 193
           AGG++P      P   SV  P   +G+ Q                +    +P+  +SF  
Sbjct: 124 AGGVAPIARTSAPMPSSVDHPGTVLGNPQSFGNSSLTGGSAAKPNMAGVASPYHANSFSS 183

Query: 192 NSGSGGFAGTSPPPIHSKFEPAAGIRGSVPFSASYNDQNTGLLNNRVEVSRAPSSYGCPQ 13
           N  SG FAGT+ PP++SK +P AGI  S   + SY DQ+TG  NN+VEVSRAP +    Q
Sbjct: 184 NPDSGRFAGTNAPPMYSKMQPDAGIPASAASTGSYGDQSTGFRNNKVEVSRAPYNAPARQ 243

Query: 12  P 10
           P
Sbjct: 244 P 244


>ref|XP_002519884.1| replication factor A 1, rfa1, putative [Ricinus communis]
           gi|223540930|gb|EEF42488.1| replication factor A 1,
           rfa1, putative [Ricinus communis]
          Length = 901

 Score = 73.2 bits (178), Expect = 4e-11
 Identities = 39/100 (39%), Positives = 53/100 (53%), Gaps = 1/100 (1%)
 Frame = -3

Query: 297 GLSPPAQPSVSRPNVAMGSQQLPRTEAPFGSSFPRNSGSGGFAGTSPPPIHSKFEPAAGI 118
           G   PA   V  PN+ + S Q PR     GSS P +  SG +  T+ PP H K EP +G+
Sbjct: 163 GSGSPAGGMVENPNLNVSSLQNPRMNQLHGSSHPSSYDSGRYVTTNAPPCHLKAEPGSGL 222

Query: 117 RGSVPFSASYNDQNTGLLNNRVEVSRAPSSYGCPQ-PAFQ 1
            GS   + SYN+Q+ G  N R E+ +   +Y  P  PA+Q
Sbjct: 223 PGSASMNRSYNEQSAGFCNPRPEIPQTTGTYPYPPCPAYQ 262


>ref|XP_007211093.1| hypothetical protein PRUPE_ppa001396mg [Prunus persica]
           gi|462406828|gb|EMJ12292.1| hypothetical protein
           PRUPE_ppa001396mg [Prunus persica]
          Length = 838

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 34/87 (39%), Positives = 45/87 (51%), Gaps = 2/87 (2%)
 Frame = -3

Query: 255 VAMGSQQLPRTEAPFGSSFPRNSGSGGFAGTSPPPIHSKFEPAAGIRGSVPFSASYNDQN 76
           V   + + PR    FGS++   S  G  A  S  P H K EP  G  GS P S SY++QN
Sbjct: 120 VTKATLEQPRVNQSFGSAYSGGSDPGRHATMSTTPNHPKPEPGFGFPGSAPLSGSYSNQN 179

Query: 75  TGLLNNRVEVSRAP-SSYG-CPQPAFQ 1
           TG  + R EV +   ++Y   PQP +Q
Sbjct: 180 TGFRSPRPEVPQPTLNAYARPPQPTYQ 206


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