BLASTX nr result

ID: Paeonia25_contig00048178 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia25_contig00048178
         (235 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006385239.1| hypothetical protein POPTR_0003s02020g [Popu...    59   9e-07

>ref|XP_006385239.1| hypothetical protein POPTR_0003s02020g [Populus trichocarpa]
           gi|550342179|gb|ERP63036.1| hypothetical protein
           POPTR_0003s02020g [Populus trichocarpa]
          Length = 567

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 27/71 (38%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
 Frame = -3

Query: 233 HILLGKPWMFDVDGIYKMRDNIIEFQWEGREVKLLPLREEGFTPTSKEDYGAFM-LSKGQ 57
           H+LLG+PW FDVD  +K RDN+  F+W   ++ L P+ +       +     F+ +SK  
Sbjct: 406 HVLLGRPWQFDVDATHKGRDNVFIFEWVSHKIALAPVDQSRKLEKPQVGSSNFLAISKNS 465

Query: 56  DEFESDLQEVG 24
            EFE  ++EVG
Sbjct: 466 HEFEDIIKEVG 476


Top