BLASTX nr result
ID: Paeonia25_contig00047931
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Paeonia25_contig00047931
(319 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana] 87 3e-15
gb|AAC33226.1| putative non-LTR retroelement reverse transcripta... 87 3e-15
gb|AAD15471.1| putative non-LTR retroelement reverse transcripta... 87 3e-15
gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thali... 86 5e-15
ref|XP_004293181.1| PREDICTED: uncharacterized protein LOC101298... 86 7e-15
gb|AAC13599.1| similar to reverse transcriptase (Pfam: transcrip... 84 3e-14
dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ... 83 4e-14
dbj|BAB01344.1| reverse transcriptase-like protein [Arabidopsis ... 82 1e-13
gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana] 81 1e-13
gb|AAC63678.1| putative non-LTR retroelement reverse transcripta... 80 2e-13
emb|CAB72467.1| putative protein [Arabidopsis thaliana] 80 2e-13
gb|AAC67331.1| putative non-LTR retroelement reverse transcripta... 80 2e-13
emb|CAA12932.1| reverse transcriptase [Pinus elliottii] 79 5e-13
gb|AAC28221.1| similar to reverse transcriptases (PFam: rvt.hmm,... 79 6e-13
emb|CAD22562.1| reverse transcriptase [Brassica rapa subsp. olei... 79 6e-13
emb|CAB45965.1| putative reverse transcriptase [Arabidopsis thal... 78 1e-12
emb|CAA73803.1| reverse transcriptase [Allium cepa] 77 2e-12
gb|EAZ03196.1| hypothetical protein OsI_25347 [Oryza sativa Indi... 77 3e-12
ref|XP_004954924.1| PREDICTED: uncharacterized protein LOC101756... 76 5e-12
gb|AAC95175.1| putative non-LTR retroelement reverse transcripta... 76 5e-12
>gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]
Length = 740
Score = 86.7 bits (213), Expect = 3e-15
Identities = 41/74 (55%), Positives = 56/74 (75%)
Frame = -2
Query: 237 ALVPNVDNATSMNDCRPISCCNVIYKCISKILAERLKLFLMDFISPS*SAFVEGRSILDN 58
AL+P D AT M D RPISCCNVIYK ISKI+A RLK+ L FI + SAFV R +++N
Sbjct: 88 ALIPKKDEATLMRDYRPISCCNVIYKVISKIIANRLKVMLPTFILQNQSAFVRERLLIEN 147
Query: 57 VLISQELIRNHHRN 16
VL++ EL++++H++
Sbjct: 148 VLLATELVKDYHKD 161
>gb|AAC33226.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1529
Score = 86.7 bits (213), Expect = 3e-15
Identities = 41/73 (56%), Positives = 55/73 (75%)
Frame = -2
Query: 237 ALVPNVDNATSMNDCRPISCCNVIYKCISKILAERLKLFLMDFISPS*SAFVEGRSILDN 58
AL+P D A M D RPISCCNV+YK ISKILA RLKL L FI + SAFV+ R +++N
Sbjct: 812 ALIPKKDEAIEMKDYRPISCCNVLYKVISKILANRLKLLLPSFILQNQSAFVKERLLMEN 871
Query: 57 VLISQELIRNHHR 19
VL++ EL++++H+
Sbjct: 872 VLLATELVKDYHK 884
>gb|AAD15471.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1277
Score = 86.7 bits (213), Expect = 3e-15
Identities = 41/74 (55%), Positives = 56/74 (75%)
Frame = -2
Query: 237 ALVPNVDNATSMNDCRPISCCNVIYKCISKILAERLKLFLMDFISPS*SAFVEGRSILDN 58
AL+P D AT M D RPISCCNVIYK ISKI+A RLK+ L FI + SAFV R +++N
Sbjct: 657 ALIPKKDEATLMRDYRPISCCNVIYKVISKIIANRLKVMLPTFILQNQSAFVRERLLMEN 716
Query: 57 VLISQELIRNHHRN 16
VL++ EL++++H++
Sbjct: 717 VLLATELVKDYHKD 730
>gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thaliana]
gi|20197043|gb|AAM14892.1| putative reverse transcriptase
[Arabidopsis thaliana]
Length = 1412
Score = 85.9 bits (211), Expect = 5e-15
Identities = 40/78 (51%), Positives = 58/78 (74%)
Frame = -2
Query: 237 ALVPNVDNATSMNDCRPISCCNVIYKCISKILAERLKLFLMDFISPS*SAFVEGRSILDN 58
AL+P A M D RPISCCNV+YK ISK+LA RLK L +FI+P+ SAF+ R +++N
Sbjct: 781 ALIPKRTYAKEMKDYRPISCCNVLYKAISKLLANRLKCLLPEFIAPNQSAFISDRLLMEN 840
Query: 57 VLISQELIRNHHRNDGFS 4
+L++ EL++++H+ DG S
Sbjct: 841 LLLASELVKDYHK-DGLS 857
>ref|XP_004293181.1| PREDICTED: uncharacterized protein LOC101298394 [Fragaria vesca
subsp. vesca]
Length = 958
Score = 85.5 bits (210), Expect = 7e-15
Identities = 42/78 (53%), Positives = 55/78 (70%)
Frame = -2
Query: 234 LVPNVDNATSMNDCRPISCCNVIYKCISKILAERLKLFLMDFISPS*SAFVEGRSILDNV 55
LVP V N T+M+D RPISCCN YK I+K+LA RLK L + PS S F+ GR I DN+
Sbjct: 337 LVPKVANPTTMSDFRPISCCNTFYKIIAKLLANRLKGTLHLIVGPSQSTFIPGRRIGDNI 396
Query: 54 LISQELIRNHHRNDGFSR 1
L++QE+I ++H+ DG R
Sbjct: 397 LLAQEIICDYHKADGQPR 414
>gb|AAC13599.1| similar to reverse transcriptase (Pfam: transcript_fact.hmm, score:
72.31) [Arabidopsis thaliana]
Length = 928
Score = 83.6 bits (205), Expect = 3e-14
Identities = 40/79 (50%), Positives = 57/79 (72%)
Frame = -2
Query: 237 ALVPNVDNATSMNDCRPISCCNVIYKCISKILAERLKLFLMDFISPS*SAFVEGRSILDN 58
AL+P A M D RPISCCNV+YK ISKI+A RLKL L FI + SAFV+ R +++N
Sbjct: 403 ALIPKKKEAKEMKDYRPISCCNVLYKVISKIIANRLKLVLPKFIVGNQSAFVKDRLLIEN 462
Query: 57 VLISQELIRNHHRNDGFSR 1
VL++ E+++++H++ SR
Sbjct: 463 VLLATEIVKDYHKDSVSSR 481
>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein
[Arabidopsis thaliana]
Length = 1223
Score = 82.8 bits (203), Expect = 4e-14
Identities = 38/74 (51%), Positives = 56/74 (75%)
Frame = -2
Query: 237 ALVPNVDNATSMNDCRPISCCNVIYKCISKILAERLKLFLMDFISPS*SAFVEGRSILDN 58
AL+P A M D RPISCCNV+YK ISKI+A RLKL L FI+ + SAFV+ R +++N
Sbjct: 515 ALIPKKTEAREMKDYRPISCCNVLYKVISKIIANRLKLVLPKFIAGNQSAFVKDRLLIEN 574
Query: 57 VLISQELIRNHHRN 16
+L++ EL++++H++
Sbjct: 575 LLLATELVKDYHKD 588
>dbj|BAB01344.1| reverse transcriptase-like protein [Arabidopsis thaliana]
Length = 1115
Score = 81.6 bits (200), Expect = 1e-13
Identities = 38/73 (52%), Positives = 54/73 (73%)
Frame = -2
Query: 237 ALVPNVDNATSMNDCRPISCCNVIYKCISKILAERLKLFLMDFISPS*SAFVEGRSILDN 58
AL+P + M D RPISCCNV+YK ISKI+A RLK L FIS + SAFV+ R +++N
Sbjct: 480 ALIPKKKESKEMRDYRPISCCNVLYKVISKIIANRLKRILPKFISGNQSAFVKDRLLIEN 539
Query: 57 VLISQELIRNHHR 19
VL++ EL++++H+
Sbjct: 540 VLLATELVKDYHK 552
>gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]
Length = 872
Score = 81.3 bits (199), Expect = 1e-13
Identities = 38/74 (51%), Positives = 56/74 (75%)
Frame = -2
Query: 237 ALVPNVDNATSMNDCRPISCCNVIYKCISKILAERLKLFLMDFISPS*SAFVEGRSILDN 58
AL+P A M D RPISCCNV+YK ISKI+A RLKL L FI+ + SAFV+ R +++N
Sbjct: 162 ALIPKKLAAKEMRDYRPISCCNVLYKVISKIIANRLKLLLPRFIAENQSAFVKDRLLIEN 221
Query: 57 VLISQELIRNHHRN 16
+L++ EL++++H++
Sbjct: 222 LLLATELVKDYHKD 235
>gb|AAC63678.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1216
Score = 80.5 bits (197), Expect = 2e-13
Identities = 38/74 (51%), Positives = 54/74 (72%)
Frame = -2
Query: 237 ALVPNVDNATSMNDCRPISCCNVIYKCISKILAERLKLFLMDFISPS*SAFVEGRSILDN 58
AL+P A + D RPISCCNV+YK ISKILA RLK L FI + SAFV+ R +++N
Sbjct: 236 ALIPKKKEAREIKDYRPISCCNVLYKAISKILANRLKRILPKFIVGNQSAFVKDRLLIEN 295
Query: 57 VLISQELIRNHHRN 16
VL++ EL++++H++
Sbjct: 296 VLLATELVKDYHKD 309
>emb|CAB72467.1| putative protein [Arabidopsis thaliana]
Length = 762
Score = 80.5 bits (197), Expect = 2e-13
Identities = 37/74 (50%), Positives = 56/74 (75%)
Frame = -2
Query: 237 ALVPNVDNATSMNDCRPISCCNVIYKCISKILAERLKLFLMDFISPS*SAFVEGRSILDN 58
AL+P + M D RPISCCNV+YK ISKILA RLKL L FI+ + S+FV+ R +++N
Sbjct: 68 ALIPKKLESKEMKDYRPISCCNVMYKVISKILANRLKLLLPQFIAGNQSSFVKDRLLIEN 127
Query: 57 VLISQELIRNHHRN 16
VL++ +L++++H++
Sbjct: 128 VLLATDLVKDYHKD 141
>gb|AAC67331.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1449
Score = 80.5 bits (197), Expect = 2e-13
Identities = 38/74 (51%), Positives = 56/74 (75%)
Frame = -2
Query: 237 ALVPNVDNATSMNDCRPISCCNVIYKCISKILAERLKLFLMDFISPS*SAFVEGRSILDN 58
AL+P A M D RPISCCNVIYK ISKI+A RLK L +FI+ + SAFV+ R +++N
Sbjct: 930 ALIPKKLEAKEMKDYRPISCCNVIYKVISKIIANRLKHVLPNFIAGNQSAFVKDRLLIEN 989
Query: 57 VLISQELIRNHHRN 16
+L++ EL++++H++
Sbjct: 990 LLLATELVKDYHKD 1003
>emb|CAA12932.1| reverse transcriptase [Pinus elliottii]
Length = 194
Score = 79.3 bits (194), Expect = 5e-13
Identities = 39/72 (54%), Positives = 51/72 (70%)
Frame = -2
Query: 237 ALVPNVDNATSMNDCRPISCCNVIYKCISKILAERLKLFLMDFISPS*SAFVEGRSILDN 58
ALVP V+ A + RPI+ CNVIYK ISK++A RLK+ L IS S +VEGR ILDN
Sbjct: 46 ALVPKVEEAHTPEKFRPIALCNVIYKIISKVIANRLKIILPGIISQEQSGYVEGRQILDN 105
Query: 57 VLISQELIRNHH 22
+L++QE+I + H
Sbjct: 106 ILLAQEMIHSLH 117
>gb|AAC28221.1| similar to reverse transcriptases (PFam: rvt.hmm, score: 60.13)
[Arabidopsis thaliana]
Length = 1164
Score = 79.0 bits (193), Expect = 6e-13
Identities = 38/74 (51%), Positives = 54/74 (72%)
Frame = -2
Query: 234 LVPNVDNATSMNDCRPISCCNVIYKCISKILAERLKLFLMDFISPS*SAFVEGRSILDNV 55
L+P + NA+SM+D RPISC N +YK ISK+L +RLK FL IS S SAF+ GR L+NV
Sbjct: 407 LIPKITNASSMSDFRPISCLNTVYKVISKLLTDRLKDFLPAAISHSQSAFMPGRLFLENV 466
Query: 54 LISQELIRNHHRND 13
L++ EL+ +++ +
Sbjct: 467 LLATELVHGYNKKN 480
>emb|CAD22562.1| reverse transcriptase [Brassica rapa subsp. oleifera]
Length = 137
Score = 79.0 bits (193), Expect = 6e-13
Identities = 35/62 (56%), Positives = 52/62 (83%)
Frame = -2
Query: 201 NDCRPISCCNVIYKCISKILAERLKLFLMDFISPS*SAFVEGRSILDNVLISQELIRNHH 22
ND RPISCCN++YK ISKI+A RLK L D +SP+ +AF++GRS+ +NVL++ ELIR+++
Sbjct: 1 NDFRPISCCNIVYKVISKIIANRLKPILRDCVSPNQAAFLKGRSLGENVLLASELIRDYN 60
Query: 21 RN 16
++
Sbjct: 61 KS 62
>emb|CAB45965.1| putative reverse transcriptase [Arabidopsis thaliana]
gi|7267919|emb|CAB78261.1| putative reverse
transcriptase [Arabidopsis thaliana]
Length = 662
Score = 78.2 bits (191), Expect = 1e-12
Identities = 35/74 (47%), Positives = 55/74 (74%)
Frame = -2
Query: 237 ALVPNVDNATSMNDCRPISCCNVIYKCISKILAERLKLFLMDFISPS*SAFVEGRSILDN 58
AL+P A + D RPISCCNV+YK ISKI+A RLK L FI+ + SAF++ R +++N
Sbjct: 33 ALIPKKMEAKEIKDYRPISCCNVLYKVISKIIANRLKRVLPQFIAGNQSAFIKDRLLIEN 92
Query: 57 VLISQELIRNHHRN 16
+L++ EL++++H++
Sbjct: 93 LLLATELVKDYHKD 106
>emb|CAA73803.1| reverse transcriptase [Allium cepa]
Length = 137
Score = 77.0 bits (188), Expect = 2e-12
Identities = 36/64 (56%), Positives = 47/64 (73%)
Frame = -2
Query: 192 RPISCCNVIYKCISKILAERLKLFLMDFISPS*SAFVEGRSILDNVLISQELIRNHHRND 13
RPISCCN IYKCISK+LA RLK L +SP+ +A++ GR+ILD+VL+S ELI+ + R
Sbjct: 4 RPISCCNTIYKCISKVLASRLKHVLPTLVSPNQAAYLSGRNILDHVLLSHELIKGYKRKS 63
Query: 12 GFSR 1
R
Sbjct: 64 ATPR 67
>gb|EAZ03196.1| hypothetical protein OsI_25347 [Oryza sativa Indica Group]
Length = 858
Score = 76.6 bits (187), Expect = 3e-12
Identities = 38/73 (52%), Positives = 47/73 (64%)
Frame = -2
Query: 234 LVPNVDNATSMNDCRPISCCNVIYKCISKILAERLKLFLMDFISPS*SAFVEGRSILDNV 55
L+P VD + D RPIS CNVIYK +SK L RL+L L D +SPS SAFV GR I DN
Sbjct: 12 LIPKVDRLAELKDFRPISLCNVIYKVVSKCLVNRLRLLLDDLVSPSQSAFVPGRLITDNA 71
Query: 54 LISQELIRNHHRN 16
L++ E + +N
Sbjct: 72 LLAFECFHHIKKN 84
>ref|XP_004954924.1| PREDICTED: uncharacterized protein LOC101756955 [Setaria italica]
Length = 1203
Score = 75.9 bits (185), Expect = 5e-12
Identities = 37/75 (49%), Positives = 48/75 (64%)
Frame = -2
Query: 234 LVPNVDNATSMNDCRPISCCNVIYKCISKILAERLKLFLMDFISPS*SAFVEGRSILDNV 55
L+P +DN + RPIS CNV+YK ISK+LA+RLK FL + I SAFV GR I DN+
Sbjct: 395 LIPKIDNPDKVTQFRPISLCNVVYKIISKMLAQRLKAFLPEIIDDHQSAFVPGRLITDNI 454
Query: 54 LISQELIRNHHRNDG 10
L++ E I + G
Sbjct: 455 LLAYECIHTMKKKKG 469
>gb|AAC95175.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1352
Score = 75.9 bits (185), Expect = 5e-12
Identities = 34/79 (43%), Positives = 55/79 (69%)
Frame = -2
Query: 237 ALVPNVDNATSMNDCRPISCCNVIYKCISKILAERLKLFLMDFISPS*SAFVEGRSILDN 58
AL+ + M D RPISCCNV+YK +SK++A RLK L I+P+ SAF++ R +++N
Sbjct: 662 ALISKKHEVSGMKDYRPISCCNVLYKIVSKLMANRLKEILPASIAPNQSAFIKDRLMMEN 721
Query: 57 VLISQELIRNHHRNDGFSR 1
+L++ EL++++H+ SR
Sbjct: 722 LLLASELVKDYHKESISSR 740