BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia25_contig00044392
         (590 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283791.1| PREDICTED: pentatricopeptide repeat-containi...   284   1e-74
emb|CAN72397.1| hypothetical protein VITISV_041201 [Vitis vinifera]   284   1e-74
ref|XP_006488968.1| PREDICTED: pentatricopeptide repeat-containi...   280   2e-73
ref|XP_006445545.1| hypothetical protein CICLE_v10014960mg [Citr...   280   2e-73
ref|XP_002303975.2| pentatricopeptide repeat-containing family p...   271   8e-71
ref|XP_004144134.1| PREDICTED: pentatricopeptide repeat-containi...   268   8e-70
ref|XP_002523384.1| pentatricopeptide repeat-containing protein,...   265   5e-69
ref|XP_007208240.1| hypothetical protein PRUPE_ppa016950mg, part...   263   3e-68
ref|XP_003589826.1| Pentatricopeptide repeat-containing protein ...   262   5e-68
gb|EXB88915.1| hypothetical protein L484_003611 [Morus notabilis]     262   6e-68
ref|XP_004294930.1| PREDICTED: pentatricopeptide repeat-containi...   261   1e-67
ref|XP_007014654.1| Pentatricopeptide repeat (PPR) superfamily p...   261   1e-67
ref|XP_004498089.1| PREDICTED: pentatricopeptide repeat-containi...   251   1e-64
ref|XP_003556973.2| PREDICTED: pentatricopeptide repeat-containi...   247   2e-63
ref|XP_004971569.1| PREDICTED: pentatricopeptide repeat-containi...   246   4e-63
ref|XP_002864446.1| pentatricopeptide repeat-containing protein ...   244   2e-62
ref|XP_007153011.1| hypothetical protein PHAVU_003G000200g [Phas...   241   8e-62
ref|XP_002455392.1| hypothetical protein SORBIDRAFT_03g010050 [S...   240   2e-61
ref|NP_200442.1| pentatricopeptide repeat-containing protein [Ar...   239   5e-61
gb|EMT16922.1| hypothetical protein F775_05289 [Aegilops tauschii]    239   5e-61

>ref|XP_002283791.1| PREDICTED: pentatricopeptide repeat-containing protein At5g56310
           [Vitis vinifera]
          Length = 576

 Score =  284 bits (727), Expect = 1e-74
 Identities = 139/196 (70%), Positives = 162/196 (82%)
 Frame = -1

Query: 590 EIAMLAALSACADLGALDLGQWIHNYIDKHGFFGIVPLKNALIDMYAKSGNIKKALEVFE 411
           EIAMLAALSACA LGAL+LG+WIHNYIDKHG   IVPL NALIDMYAK G I+KALEVF+
Sbjct: 271 EIAMLAALSACAHLGALELGEWIHNYIDKHGLSKIVPLNNALIDMYAKCGKIEKALEVFK 330

Query: 410 SMKHRSVITWTTIIXXXXXXXXXXXXXEMFSRMDRARIKPNEITFIAILHACSHVGLVDM 231
           +M+H+SVITWT++I             EMFS M+R RIKPNEITF+AIL AC HVGLV+M
Sbjct: 331 NMEHKSVITWTSMIDGLALHGLGREALEMFSCMERNRIKPNEITFVAILSACCHVGLVEM 390

Query: 230 GWWYFNNMGSRFGMEPNIEHYGCMIDLLGRAGYLREAQELVRKMPFEANGAIWGSLLAAS 51
           G WYF  MG+++G++P I+HYGCMIDLLGRAG+L+EAQELVR MPFEAN  IWGSLLAA+
Sbjct: 391 GRWYFKCMGTKYGIKPKIQHYGCMIDLLGRAGFLQEAQELVRGMPFEANAPIWGSLLAAA 450

Query: 50  KIHGDPNLGELALQHL 3
           +IHGD  LG+ ALQHL
Sbjct: 451 RIHGDAELGKQALQHL 466



 Score = 85.9 bits (211), Expect = 8e-15
 Identities = 49/162 (30%), Positives = 83/162 (51%)
 Frame = -1

Query: 494 FGIVPLKNALIDMYAKSGNIKKALEVFESMKHRSVITWTTIIXXXXXXXXXXXXXEMFSR 315
           F  V   NA++  YAK G++  A  +FE M  R+VI+WT +I              MF R
Sbjct: 202 FRDVAFWNAMVAGYAKVGDVDNARHLFERMPERNVISWTAVIAGYAQMDRPNEAITMFRR 261

Query: 314 MDRARIKPNEITFIAILHACSHVGLVDMGWWYFNNMGSRFGMEPNIEHYGCMIDLLGRAG 135
           M    ++P+EI  +A L AC+H+G +++G W  N +  + G+   +     +ID+  + G
Sbjct: 262 MQLEEVEPDEIAMLAALSACAHLGALELGEWIHNYI-DKHGLSKIVPLNNALIDMYAKCG 320

Query: 134 YLREAQELVRKMPFEANGAIWGSLLAASKIHGDPNLGELALQ 9
            + +A E+ + M  + +   W S++    +HG   LG  AL+
Sbjct: 321 KIEKALEVFKNMEHK-SVITWTSMIDGLALHG---LGREALE 358


>emb|CAN72397.1| hypothetical protein VITISV_041201 [Vitis vinifera]
          Length = 576

 Score =  284 bits (727), Expect = 1e-74
 Identities = 139/196 (70%), Positives = 162/196 (82%)
 Frame = -1

Query: 590 EIAMLAALSACADLGALDLGQWIHNYIDKHGFFGIVPLKNALIDMYAKSGNIKKALEVFE 411
           EIAMLAALSACA LGAL+LG+WIHNYIDKHG   IVPL NALIDMYAK G I+KALEVF+
Sbjct: 271 EIAMLAALSACAHLGALELGEWIHNYIDKHGLSKIVPLNNALIDMYAKCGKIEKALEVFK 330

Query: 410 SMKHRSVITWTTIIXXXXXXXXXXXXXEMFSRMDRARIKPNEITFIAILHACSHVGLVDM 231
           +M+H+SVITWT++I             EMFS M+R RIKPNEITF+AIL AC HVGLV+M
Sbjct: 331 NMEHKSVITWTSMIDGLALHGLGREALEMFSCMERNRIKPNEITFVAILSACCHVGLVEM 390

Query: 230 GWWYFNNMGSRFGMEPNIEHYGCMIDLLGRAGYLREAQELVRKMPFEANGAIWGSLLAAS 51
           G WYF  MG+++G++P I+HYGCMIDLLGRAG+L+EAQELVR MPFEAN  IWGSLLAA+
Sbjct: 391 GRWYFKCMGTKYGIKPKIQHYGCMIDLLGRAGFLQEAQELVRGMPFEANAPIWGSLLAAA 450

Query: 50  KIHGDPNLGELALQHL 3
           +IHGD  LG+ ALQHL
Sbjct: 451 RIHGDAELGKQALQHL 466



 Score = 85.9 bits (211), Expect = 8e-15
 Identities = 49/162 (30%), Positives = 83/162 (51%)
 Frame = -1

Query: 494 FGIVPLKNALIDMYAKSGNIKKALEVFESMKHRSVITWTTIIXXXXXXXXXXXXXEMFSR 315
           F  V   NA++  YAK G++  A  +FE M  R+VI+WT +I              MF R
Sbjct: 202 FRDVAFWNAMVAGYAKVGDVDNARHLFERMPERNVISWTAVIAGYAQMDRPNEAITMFRR 261

Query: 314 MDRARIKPNEITFIAILHACSHVGLVDMGWWYFNNMGSRFGMEPNIEHYGCMIDLLGRAG 135
           M    ++P+EI  +A L AC+H+G +++G W  N +  + G+   +     +ID+  + G
Sbjct: 262 MQLEEVEPDEIAMLAALSACAHLGALELGEWIHNYI-DKHGLSKIVPLNNALIDMYAKCG 320

Query: 134 YLREAQELVRKMPFEANGAIWGSLLAASKIHGDPNLGELALQ 9
            + +A E+ + M  + +   W S++    +HG   LG  AL+
Sbjct: 321 KIEKALEVFKNMEHK-SVITWTSMIDGLALHG---LGREALE 358


>ref|XP_006488968.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g56310-like isoform X1 [Citrus sinensis]
           gi|568871598|ref|XP_006488969.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At5g56310-like isoform X2 [Citrus sinensis]
          Length = 564

 Score =  280 bits (716), Expect = 2e-73
 Identities = 139/196 (70%), Positives = 163/196 (83%)
 Frame = -1

Query: 590 EIAMLAALSACADLGALDLGQWIHNYIDKHGFFGIVPLKNALIDMYAKSGNIKKALEVFE 411
           EIAMLAALSACA LGA++LG+WIHNYI+++G   IVPL NALIDMYAKSG I KAL+VFE
Sbjct: 267 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFE 326

Query: 410 SMKHRSVITWTTIIXXXXXXXXXXXXXEMFSRMDRARIKPNEITFIAILHACSHVGLVDM 231
           +MK++SVITWTT+I             +MFSRM+RAR+KPNEITFIAIL AC HVGLV++
Sbjct: 327 NMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVEL 386

Query: 230 GWWYFNNMGSRFGMEPNIEHYGCMIDLLGRAGYLREAQELVRKMPFEANGAIWGSLLAAS 51
           G  YFN M SR+G+EP IE YGCMIDLLGRAGYL+EA++L+R+MPFEAN AIWGSLLAAS
Sbjct: 387 GRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAAS 446

Query: 50  KIHGDPNLGELALQHL 3
            I+GD  LGE ALQHL
Sbjct: 447 NIYGDVELGECALQHL 462



 Score = 80.9 bits (198), Expect = 2e-13
 Identities = 46/158 (29%), Positives = 82/158 (51%)
 Frame = -1

Query: 485 VPLKNALIDMYAKSGNIKKALEVFESMKHRSVITWTTIIXXXXXXXXXXXXXEMFSRMDR 306
           V + N ++  YAK G++  A  +FE M  ++VI+WTT+I              +F RM  
Sbjct: 201 VAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQV 260

Query: 305 ARIKPNEITFIAILHACSHVGLVDMGWWYFNNMGSRFGMEPNIEHYGCMIDLLGRAGYLR 126
             +KP+EI  +A L AC+ +G V++G W  N +  ++G+   +     +ID+  ++G + 
Sbjct: 261 ENVKPDEIAMLAALSACAQLGAVELGEWIHNYI-EQYGLNTIVPLNNALIDMYAKSGKIG 319

Query: 125 EAQELVRKMPFEANGAIWGSLLAASKIHGDPNLGELAL 12
           +A ++   M    +   W +++A   +HG   LG  AL
Sbjct: 320 KALQVFENMK-NKSVITWTTMIAGLALHG---LGREAL 353


>ref|XP_006445545.1| hypothetical protein CICLE_v10014960mg [Citrus clementina]
           gi|557548156|gb|ESR58785.1| hypothetical protein
           CICLE_v10014960mg [Citrus clementina]
          Length = 510

 Score =  280 bits (716), Expect = 2e-73
 Identities = 139/196 (70%), Positives = 163/196 (83%)
 Frame = -1

Query: 590 EIAMLAALSACADLGALDLGQWIHNYIDKHGFFGIVPLKNALIDMYAKSGNIKKALEVFE 411
           EIAMLAALSACA LGA++LG+WIHNYI+++G   IVPL NALIDMYAKSG I KAL+VFE
Sbjct: 210 EIAMLAALSACAQLGAVELGEWIHNYIEQYGLNTIVPLNNALIDMYAKSGKIGKALQVFE 269

Query: 410 SMKHRSVITWTTIIXXXXXXXXXXXXXEMFSRMDRARIKPNEITFIAILHACSHVGLVDM 231
           +MK++SVITWTT+I             +MFSRM+RAR+KPNEITFIAIL AC HVGLV++
Sbjct: 270 NMKNKSVITWTTMIAGLALHGLGREALDMFSRMERARVKPNEITFIAILSACCHVGLVEL 329

Query: 230 GWWYFNNMGSRFGMEPNIEHYGCMIDLLGRAGYLREAQELVRKMPFEANGAIWGSLLAAS 51
           G  YFN M SR+G+EP IE YGCMIDLLGRAGYL+EA++L+R+MPFEAN AIWGSLLAAS
Sbjct: 330 GRRYFNIMKSRYGIEPKIEQYGCMIDLLGRAGYLQEAEKLLRRMPFEANAAIWGSLLAAS 389

Query: 50  KIHGDPNLGELALQHL 3
            I+GD  LGE ALQHL
Sbjct: 390 NIYGDVELGECALQHL 405



 Score = 80.9 bits (198), Expect = 2e-13
 Identities = 46/158 (29%), Positives = 82/158 (51%)
 Frame = -1

Query: 485 VPLKNALIDMYAKSGNIKKALEVFESMKHRSVITWTTIIXXXXXXXXXXXXXEMFSRMDR 306
           V + N ++  YAK G++  A  +FE M  ++VI+WTT+I              +F RM  
Sbjct: 144 VAVWNTMVAGYAKVGDLNNARALFELMTEKNVISWTTLIAGYAQMDQPNEAITLFRRMQV 203

Query: 305 ARIKPNEITFIAILHACSHVGLVDMGWWYFNNMGSRFGMEPNIEHYGCMIDLLGRAGYLR 126
             +KP+EI  +A L AC+ +G V++G W  N +  ++G+   +     +ID+  ++G + 
Sbjct: 204 ENVKPDEIAMLAALSACAQLGAVELGEWIHNYI-EQYGLNTIVPLNNALIDMYAKSGKIG 262

Query: 125 EAQELVRKMPFEANGAIWGSLLAASKIHGDPNLGELAL 12
           +A ++   M    +   W +++A   +HG   LG  AL
Sbjct: 263 KALQVFENMK-NKSVITWTTMIAGLALHG---LGREAL 296


>ref|XP_002303975.2| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|550343649|gb|EEE78954.2|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 543

 Score =  271 bits (694), Expect = 8e-71
 Identities = 134/197 (68%), Positives = 156/197 (79%), Gaps = 1/197 (0%)
 Frame = -1

Query: 590 EIAMLAALSACADLGALDLGQWIHNYIDKHGFFGI-VPLKNALIDMYAKSGNIKKALEVF 414
           EIAML AL+ACA LGAL+LG+WI +YID+ G     +PL NALIDMYAKSG+IK AL+VF
Sbjct: 249 EIAMLVALTACARLGALELGEWIRHYIDRLGLLTTNIPLNNALIDMYAKSGDIKSALQVF 308

Query: 413 ESMKHRSVITWTTIIXXXXXXXXXXXXXEMFSRMDRARIKPNEITFIAILHACSHVGLVD 234
           E+M H+++ITWTT+I             EMFSRM+RAR+KPN+ITFIAIL ACSHVGLV 
Sbjct: 309 ENMNHKTIITWTTMIAGLALHGLGTEALEMFSRMERARVKPNDITFIAILSACSHVGLVQ 368

Query: 233 MGWWYFNNMGSRFGMEPNIEHYGCMIDLLGRAGYLREAQELVRKMPFEANGAIWGSLLAA 54
            G WYFN M SR+G+EP IEHYGCMIDLLGRAG+L+EAQ L+ +MPFE N  IWGSLLAA
Sbjct: 369 TGRWYFNRMISRYGIEPKIEHYGCMIDLLGRAGHLKEAQTLLAQMPFEPNAVIWGSLLAA 428

Query: 53  SKIHGDPNLGELALQHL 3
              HGDP LGELALQHL
Sbjct: 429 CNTHGDPELGELALQHL 445



 Score = 79.7 bits (195), Expect = 5e-13
 Identities = 48/164 (29%), Positives = 85/164 (51%), Gaps = 3/164 (1%)
 Frame = -1

Query: 491 GIVPLKNALIDMYAKSGNIKKALEVFESMKHRSVITWTTIIXXXXXXXXXXXXXEMFSRM 312
           G V L NA+++ YAK G++  A ++FE M  R+VI+WT +I              +F RM
Sbjct: 181 GDVALWNAMLNGYAKHGDLCNARDLFERMPQRNVISWTALITGYAQANRPHDAIALFRRM 240

Query: 311 DRARIKPNEITFIAILHACSHVGLVDMGWW---YFNNMGSRFGMEPNIEHYGCMIDLLGR 141
               ++P+EI  +  L AC+ +G +++G W   Y + +G    +  NI     +ID+  +
Sbjct: 241 QLENVEPDEIAMLVALTACARLGALELGEWIRHYIDRLGL---LTTNIPLNNALIDMYAK 297

Query: 140 AGYLREAQELVRKMPFEANGAIWGSLLAASKIHGDPNLGELALQ 9
           +G ++ A ++   M  +     W +++A   +HG   LG  AL+
Sbjct: 298 SGDIKSALQVFENMNHKTI-ITWTTMIAGLALHG---LGTEALE 337


>ref|XP_004144134.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g56310-like [Cucumis sativus]
           gi|449493602|ref|XP_004159370.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At5g56310-like [Cucumis sativus]
          Length = 548

 Score =  268 bits (685), Expect = 8e-70
 Identities = 129/196 (65%), Positives = 157/196 (80%)
 Frame = -1

Query: 590 EIAMLAALSACADLGALDLGQWIHNYIDKHGFFGIVPLKNALIDMYAKSGNIKKALEVFE 411
           EIAMLA LSACADLGAL+LG+WIHNYI+KHG   IV L NALIDMYAKSGNI++ALEVFE
Sbjct: 254 EIAMLAVLSACADLGALELGEWIHNYIEKHGLCRIVSLYNALIDMYAKSGNIRRALEVFE 313

Query: 410 SMKHRSVITWTTIIXXXXXXXXXXXXXEMFSRMDRARIKPNEITFIAILHACSHVGLVDM 231
           +MK +SVITW+T+I             +MF RM++A+++PNE+TF+AIL ACSHVG+VD+
Sbjct: 314 NMKQKSVITWSTVIAALALHGLGGEAIDMFLRMEKAKVRPNEVTFVAILSACSHVGMVDV 373

Query: 230 GWWYFNNMGSRFGMEPNIEHYGCMIDLLGRAGYLREAQELVRKMPFEANGAIWGSLLAAS 51
           G +YF+ M S + +EP IEHYGCMIDLL RAGYL+EAQ+L+  MPFEAN  IWGSLLAAS
Sbjct: 374 GRYYFDQMQSMYKIEPKIEHYGCMIDLLARAGYLQEAQKLLHDMPFEANAMIWGSLLAAS 433

Query: 50  KIHGDPNLGELALQHL 3
             H D  L +LAL+HL
Sbjct: 434 NTHRDAELAQLALKHL 449



 Score = 90.1 bits (222), Expect = 4e-16
 Identities = 48/152 (31%), Positives = 83/152 (54%)
 Frame = -1

Query: 494 FGIVPLKNALIDMYAKSGNIKKALEVFESMKHRSVITWTTIIXXXXXXXXXXXXXEMFSR 315
           F  V L NA++  Y K G +K A +VF  M  R+VI+WTT+I             E+F +
Sbjct: 185 FKDVALWNAMVAGYVKVGELKSARKVFNEMPQRNVISWTTLIAGYAQTNRPHEAIELFRK 244

Query: 314 MDRARIKPNEITFIAILHACSHVGLVDMGWWYFNNMGSRFGMEPNIEHYGCMIDLLGRAG 135
           M    ++P+EI  +A+L AC+ +G +++G W  N +  + G+   +  Y  +ID+  ++G
Sbjct: 245 MQLEEVEPDEIAMLAVLSACADLGALELGEWIHNYI-EKHGLCRIVSLYNALIDMYAKSG 303

Query: 134 YLREAQELVRKMPFEANGAIWGSLLAASKIHG 39
            +R A E+   M  + +   W +++AA  +HG
Sbjct: 304 NIRRALEVFENMK-QKSVITWSTVIAALALHG 334


>ref|XP_002523384.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223537334|gb|EEF38963.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 538

 Score =  265 bits (678), Expect = 5e-69
 Identities = 130/196 (66%), Positives = 154/196 (78%)
 Frame = -1

Query: 590 EIAMLAALSACADLGALDLGQWIHNYIDKHGFFGIVPLKNALIDMYAKSGNIKKALEVFE 411
           EI +LA LSACA LGAL+LG+WI NYID HG    VPL NALIDMYAKSGNIK+AL +FE
Sbjct: 243 EITLLAVLSACAQLGALELGEWIRNYIDIHGLHRNVPLHNALIDMYAKSGNIKRALLIFE 302

Query: 410 SMKHRSVITWTTIIXXXXXXXXXXXXXEMFSRMDRARIKPNEITFIAILHACSHVGLVDM 231
           SMKH++++TWTT+I             EMFSRM+R R+KPNEITFIA+L ACSHVGLV +
Sbjct: 303 SMKHKTIVTWTTMIAGLALHGLGTQALEMFSRMERDRVKPNEITFIAVLSACSHVGLVQL 362

Query: 230 GWWYFNNMGSRFGMEPNIEHYGCMIDLLGRAGYLREAQELVRKMPFEANGAIWGSLLAAS 51
              +F NM SR+ ++P IEHYGCMIDLLGRAGYL+EAQ+L+++MPFE N AIWGSLLAAS
Sbjct: 363 ARSFFTNMRSRYTIQPKIEHYGCMIDLLGRAGYLQEAQQLLQQMPFEPNAAIWGSLLAAS 422

Query: 50  KIHGDPNLGELALQHL 3
             HGD  LGE  L+HL
Sbjct: 423 YTHGDAMLGERTLKHL 438



 Score = 79.0 bits (193), Expect = 9e-13
 Identities = 45/159 (28%), Positives = 82/159 (51%)
 Frame = -1

Query: 485 VPLKNALIDMYAKSGNIKKALEVFESMKHRSVITWTTIIXXXXXXXXXXXXXEMFSRMDR 306
           V L NA++  YAK  ++  A  +F+SM  R++I+WT +I              +F  M  
Sbjct: 177 VALWNAMLTSYAKICDMPNAQHLFDSMPQRNLISWTALISGYAHINRPHQAIAIFRTMQL 236

Query: 305 ARIKPNEITFIAILHACSHVGLVDMGWWYFNNMGSRFGMEPNIEHYGCMIDLLGRAGYLR 126
             + P+EIT +A+L AC+ +G +++G W  N +    G+  N+  +  +ID+  ++G ++
Sbjct: 237 QNVVPDEITLLAVLSACAQLGALELGEWIRNYIDIH-GLHRNVPLHNALIDMYAKSGNIK 295

Query: 125 EAQELVRKMPFEANGAIWGSLLAASKIHGDPNLGELALQ 9
            A  +   M  +     W +++A   +HG   LG  AL+
Sbjct: 296 RALLIFESMKHKTI-VTWTTMIAGLALHG---LGTQALE 330


>ref|XP_007208240.1| hypothetical protein PRUPE_ppa016950mg, partial [Prunus persica]
           gi|462403882|gb|EMJ09439.1| hypothetical protein
           PRUPE_ppa016950mg, partial [Prunus persica]
          Length = 532

 Score =  263 bits (671), Expect = 3e-68
 Identities = 131/196 (66%), Positives = 156/196 (79%)
 Frame = -1

Query: 590 EIAMLAALSACADLGALDLGQWIHNYIDKHGFFGIVPLKNALIDMYAKSGNIKKALEVFE 411
           EI+MLAALSACA LGAL LG+WIHNYI+KH F  +V L NALIDMYAKSGNI KAL+VFE
Sbjct: 238 EISMLAALSACAHLGALHLGEWIHNYIEKHEFRKLVSLNNALIDMYAKSGNITKALQVFE 297

Query: 410 SMKHRSVITWTTIIXXXXXXXXXXXXXEMFSRMDRARIKPNEITFIAILHACSHVGLVDM 231
           + K ++V+TWTT+I             EMF++M+R +IKPN+ITFIAIL ACSH  LV++
Sbjct: 298 NTKCKTVVTWTTMIAGLALHGLGREALEMFAQMERVKIKPNDITFIAILSACSHGRLVEI 357

Query: 230 GWWYFNNMGSRFGMEPNIEHYGCMIDLLGRAGYLREAQELVRKMPFEANGAIWGSLLAAS 51
           G WYF+ M S++ ++P I HYGCMIDLL RAGYL+EA ELVR+MPFEAN AIWGSLLAAS
Sbjct: 358 GHWYFSIMVSKYRIKPKIVHYGCMIDLLARAGYLQEAHELVRQMPFEANAAIWGSLLAAS 417

Query: 50  KIHGDPNLGELALQHL 3
            IHGD  LG+ ALQHL
Sbjct: 418 NIHGDAELGQHALQHL 433



 Score = 75.1 bits (183), Expect = 1e-11
 Identities = 48/164 (29%), Positives = 83/164 (50%), Gaps = 2/164 (1%)
 Frame = -1

Query: 494 FGIVPLKNALIDMYAKSGNIKKALEVFESM--KHRSVITWTTIIXXXXXXXXXXXXXEMF 321
           F  V L NA+I  YAKSG++  A  +FE M  + R+VI+WT +I              +F
Sbjct: 167 FRDVALWNAMIAGYAKSGDVDNARHLFELMPPRIRNVISWTALIAGYAQVDRPHEAITVF 226

Query: 320 SRMDRARIKPNEITFIAILHACSHVGLVDMGWWYFNNMGSRFGMEPNIEHYGCMIDLLGR 141
            RM    ++P+EI+ +A L AC+H+G + +G W  N +  +      +     +ID+  +
Sbjct: 227 RRMQLENVQPDEISMLAALSACAHLGALHLGEWIHNYI-EKHEFRKLVSLNNALIDMYAK 285

Query: 140 AGYLREAQELVRKMPFEANGAIWGSLLAASKIHGDPNLGELALQ 9
           +G + +A ++      +     W +++A   +HG   LG  AL+
Sbjct: 286 SGNITKALQVFENTKCK-TVVTWTTMIAGLALHG---LGREALE 325


>ref|XP_003589826.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355478874|gb|AES60077.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 526

 Score =  262 bits (670), Expect = 5e-68
 Identities = 131/197 (66%), Positives = 158/197 (80%), Gaps = 1/197 (0%)
 Frame = -1

Query: 590 EIAMLAALSACADLGALDLGQWIHNYIDKHGFFGIVPLKNALIDMYAKSGNIKKALEVFE 411
           EIA+LA LSACADLGAL LG+WIHNYI+KH    IVPL N+LIDMYAKSGNI+KALE+FE
Sbjct: 244 EIAILAVLSACADLGALHLGEWIHNYIEKHKLSKIVPLYNSLIDMYAKSGNIRKALELFE 303

Query: 410 SMKHRSVITWTTIIXXXXXXXXXXXXXEMFSRMDRA-RIKPNEITFIAILHACSHVGLVD 234
           +MKH+++ITWTT+I              +FS M++  R+KPNE+TFIAIL ACSHVGLV+
Sbjct: 304 NMKHKTIITWTTMIAGLALHGLGKEALRVFSCMEKEDRVKPNEVTFIAILSACSHVGLVE 363

Query: 233 MGWWYFNNMGSRFGMEPNIEHYGCMIDLLGRAGYLREAQELVRKMPFEANGAIWGSLLAA 54
           +G  YF +M SR+G+EP IEHYGCMIDLLGRAG+L+EA+E+V +MPFEAN AIWGSLLAA
Sbjct: 364 LGRDYFTSMRSRYGIEPKIEHYGCMIDLLGRAGHLQEAKEMVLRMPFEANAAIWGSLLAA 423

Query: 53  SKIHGDPNLGELALQHL 3
           S   GD  L E AL+HL
Sbjct: 424 STRCGDAELAEEALRHL 440



 Score = 79.0 bits (193), Expect = 9e-13
 Identities = 47/157 (29%), Positives = 82/157 (52%), Gaps = 2/157 (1%)
 Frame = -1

Query: 473 NALIDMYAKSGNIKKALEVFESMKHRS--VITWTTIIXXXXXXXXXXXXXEMFSRMDRAR 300
           NA+I  Y K G++  A ++F+SM  R   V +WT +I             ++F RM    
Sbjct: 180 NAMIVAYVKVGDVSNARKLFDSMLERDKDVFSWTAMISGYTQAHNPNEAIKLFRRMQLEN 239

Query: 299 IKPNEITFIAILHACSHVGLVDMGWWYFNNMGSRFGMEPNIEHYGCMIDLLGRAGYLREA 120
           +KP+EI  +A+L AC+ +G + +G W  N +  +  +   +  Y  +ID+  ++G +R+A
Sbjct: 240 VKPDEIAILAVLSACADLGALHLGEWIHNYI-EKHKLSKIVPLYNSLIDMYAKSGNIRKA 298

Query: 119 QELVRKMPFEANGAIWGSLLAASKIHGDPNLGELALQ 9
            EL   M  +     W +++A   +HG   LG+ AL+
Sbjct: 299 LELFENMKHKTI-ITWTTMIAGLALHG---LGKEALR 331


>gb|EXB88915.1| hypothetical protein L484_003611 [Morus notabilis]
          Length = 524

 Score =  262 bits (669), Expect = 6e-68
 Identities = 128/196 (65%), Positives = 151/196 (77%)
 Frame = -1

Query: 590 EIAMLAALSACADLGALDLGQWIHNYIDKHGFFGIVPLKNALIDMYAKSGNIKKALEVFE 411
           E+A+LA LSACA LG+L LG+ IHNYI K GF   + L NALIDMY KSG+I+KAL VFE
Sbjct: 230 EVAILALLSACAHLGSLRLGERIHNYIQKRGFSRKLRLNNALIDMYVKSGSIRKALNVFE 289

Query: 410 SMKHRSVITWTTIIXXXXXXXXXXXXXEMFSRMDRARIKPNEITFIAILHACSHVGLVDM 231
           SMK RSV+TWTT++              MFSRM+ A +KPN+ITFIA+L AC H GLV+M
Sbjct: 290 SMKERSVVTWTTMLAGLALHGLGREASVMFSRMESAVVKPNDITFIAVLSACRHAGLVEM 349

Query: 230 GWWYFNNMGSRFGMEPNIEHYGCMIDLLGRAGYLREAQELVRKMPFEANGAIWGSLLAAS 51
           G WYFNNM SR+G++P IEHYGCMIDLLGR GYL+EA ELV+ MPF+AN AIWGSLL AS
Sbjct: 350 GRWYFNNMDSRYGIQPKIEHYGCMIDLLGRGGYLQEAWELVKAMPFKANAAIWGSLLGAS 409

Query: 50  KIHGDPNLGELALQHL 3
            +HG+  LGE ALQHL
Sbjct: 410 NMHGNAELGERALQHL 425



 Score = 82.8 bits (203), Expect = 6e-14
 Identities = 46/152 (30%), Positives = 81/152 (53%)
 Frame = -1

Query: 494 FGIVPLKNALIDMYAKSGNIKKALEVFESMKHRSVITWTTIIXXXXXXXXXXXXXEMFSR 315
           F  V L NA++  YAK+G++  A +VFE M  R++I+WT++I              +F R
Sbjct: 161 FWDVALWNAMVAGYAKAGDVDNARKVFEQMPERNLISWTSVIAGYAQMKRPEEAILLFKR 220

Query: 314 MDRARIKPNEITFIAILHACSHVGLVDMGWWYFNNMGSRFGMEPNIEHYGCMIDLLGRAG 135
           M    ++P+E+  +A+L AC+H+G + +G    N +  R G    +     +ID+  ++G
Sbjct: 221 MLLENVEPDEVAILALLSACAHLGSLRLGERIHNYIQKR-GFSRKLRLNNALIDMYVKSG 279

Query: 134 YLREAQELVRKMPFEANGAIWGSLLAASKIHG 39
            +R+A  +   M  E +   W ++LA   +HG
Sbjct: 280 SIRKALNVFESMK-ERSVVTWTTMLAGLALHG 310


>ref|XP_004294930.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g56310-like [Fragaria vesca subsp. vesca]
          Length = 518

 Score =  261 bits (667), Expect = 1e-67
 Identities = 132/196 (67%), Positives = 153/196 (78%)
 Frame = -1

Query: 590 EIAMLAALSACADLGALDLGQWIHNYIDKHGFFGIVPLKNALIDMYAKSGNIKKALEVFE 411
           EIAMLAALSACA LGAL LG+WIHNYI KHGF  +  L NALIDMYAKSGNI+KAL+VF 
Sbjct: 224 EIAMLAALSACAQLGALRLGEWIHNYIQKHGFRELSSLNNALIDMYAKSGNIRKALQVFH 283

Query: 410 SMKHRSVITWTTIIXXXXXXXXXXXXXEMFSRMDRARIKPNEITFIAILHACSHVGLVDM 231
           S  H++VITWTT+I             +MFS+M+RA+I PN ITFIAIL ACSH  LV  
Sbjct: 284 STNHKTVITWTTMIAGLALHGLGTQALDMFSQMERAQIAPNHITFIAILSACSHAHLVQT 343

Query: 230 GWWYFNNMGSRFGMEPNIEHYGCMIDLLGRAGYLREAQELVRKMPFEANGAIWGSLLAAS 51
           G  YF+ M SR+ ++P I HYGCM+DLLGRAGYL+EAQ+LVR+MPFEAN AIWGSLLAAS
Sbjct: 344 GLRYFDIMVSRYRIQPKIMHYGCMVDLLGRAGYLQEAQQLVRQMPFEANAAIWGSLLAAS 403

Query: 50  KIHGDPNLGELALQHL 3
            IHG+  LGE ALQ+L
Sbjct: 404 NIHGNDELGEHALQNL 419



 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 48/163 (29%), Positives = 80/163 (49%), Gaps = 2/163 (1%)
 Frame = -1

Query: 494 FGIVPLKNALIDMYAKSGNIKKALEVFESM--KHRSVITWTTIIXXXXXXXXXXXXXEMF 321
           F  V L NA+I  YAK G++  A  VFE+M   + +VI+WT +I              +F
Sbjct: 153 FRDVALWNAMIAGYAKLGHVDSARHVFETMPLNNSNVISWTALIAGYAQVNRPTEAIMVF 212

Query: 320 SRMDRARIKPNEITFIAILHACSHVGLVDMGWWYFNNMGSRFGMEPNIEHYGCMIDLLGR 141
            RM    ++P+EI  +A L AC+ +G + +G W  N +  + G          +ID+  +
Sbjct: 213 RRMQLHNVQPDEIAMLAALSACAQLGALRLGEWIHNYI-QKHGFRELSSLNNALIDMYAK 271

Query: 140 AGYLREAQELVRKMPFEANGAIWGSLLAASKIHGDPNLGELAL 12
           +G +R+A ++      +     W +++A   +HG   LG  AL
Sbjct: 272 SGNIRKALQVFHSTNHK-TVITWTTMIAGLALHG---LGTQAL 310


>ref|XP_007014654.1| Pentatricopeptide repeat (PPR) superfamily protein, putative
           isoform 1 [Theobroma cacao]
           gi|590582550|ref|XP_007014655.1| Pentatricopeptide
           repeat (PPR) superfamily protein, putative isoform 1
           [Theobroma cacao] gi|508785017|gb|EOY32273.1|
           Pentatricopeptide repeat (PPR) superfamily protein,
           putative isoform 1 [Theobroma cacao]
           gi|508785018|gb|EOY32274.1| Pentatricopeptide repeat
           (PPR) superfamily protein, putative isoform 1 [Theobroma
           cacao]
          Length = 540

 Score =  261 bits (666), Expect = 1e-67
 Identities = 128/198 (64%), Positives = 157/198 (79%), Gaps = 2/198 (1%)
 Frame = -1

Query: 590 EIAMLAALSACADLGALD--LGQWIHNYIDKHGFFGIVPLKNALIDMYAKSGNIKKALEV 417
           EIAMLA L+ACA LGA+   LG+ IH YI KHGF  ++PLKNALI+MYAKSG+I KAL+V
Sbjct: 244 EIAMLAVLTACAHLGAIQFLLGECIHGYIHKHGFNQMIPLKNALIEMYAKSGDICKALQV 303

Query: 416 FESMKHRSVITWTTIIXXXXXXXXXXXXXEMFSRMDRARIKPNEITFIAILHACSHVGLV 237
           FE+M H++VITWTTII             +MFSRM+RA+++PN+ITF+A+L AC+H GLV
Sbjct: 304 FENMNHKTVITWTTIISALAFHGLGTLALQMFSRMERAQVQPNDITFLAVLSACTHAGLV 363

Query: 236 DMGWWYFNNMGSRFGMEPNIEHYGCMIDLLGRAGYLREAQELVRKMPFEANGAIWGSLLA 57
           D+G  +FN M SR+G++P I+HYGCMIDLLGRAGYLREA ELV +MPF+ N AIWGSLLA
Sbjct: 364 DLGGCFFNTMSSRYGIQPKIQHYGCMIDLLGRAGYLREALELVSRMPFKPNAAIWGSLLA 423

Query: 56  ASKIHGDPNLGELALQHL 3
           AS IH +  LGELAL HL
Sbjct: 424 ASNIHANAELGELALLHL 441



 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 44/166 (26%), Positives = 76/166 (45%), Gaps = 7/166 (4%)
 Frame = -1

Query: 485 VPLKNALIDMYAKSGNIKKALEVFESMKHRS------VITWTTIIXXXXXXXXXXXXXEM 324
           V L +A I  YAK G+   A ++ E M          ++ WTT+I              +
Sbjct: 172 VALWSATIAGYAKVGDPDAAWDLLERMPQTQTNAEAVMVCWTTVIAGYAQMDRPNEAIAV 231

Query: 323 FSRMDRARIKPNEITFIAILHACSHVGLVD-MGWWYFNNMGSRFGMEPNIEHYGCMIDLL 147
           F RM    +KP+EI  +A+L AC+H+G +  +     +    + G    I     +I++ 
Sbjct: 232 FRRMQLENVKPDEIAMLAVLTACAHLGAIQFLLGECIHGYIHKHGFNQMIPLKNALIEMY 291

Query: 146 GRAGYLREAQELVRKMPFEANGAIWGSLLAASKIHGDPNLGELALQ 9
            ++G + +A ++   M  +     W ++++A   HG   LG LALQ
Sbjct: 292 AKSGDICKALQVFENMNHK-TVITWTTIISALAFHG---LGTLALQ 333


>ref|XP_004498089.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g56310-like [Cicer arietinum]
          Length = 546

 Score =  251 bits (641), Expect = 1e-64
 Identities = 125/197 (63%), Positives = 153/197 (77%), Gaps = 1/197 (0%)
 Frame = -1

Query: 590 EIAMLAALSACADLGALDLGQWIHNYIDKHGFFGIVPLKNALIDMYAKSGNIKKALEVFE 411
           EIA+LA LSACADLGAL LG+WIHNYI+KH    IVPL N+LIDMYAKSGNI KAL++FE
Sbjct: 264 EIAILAVLSACADLGALHLGEWIHNYIEKHKLNKIVPLYNSLIDMYAKSGNISKALKLFE 323

Query: 410 SMKHRSVITWTTIIXXXXXXXXXXXXXEMFSRMDR-ARIKPNEITFIAILHACSHVGLVD 234
           +M H+++ITWTT+I              +FSRM++  R+KPNE+TFIA+L ACSHV LV+
Sbjct: 324 NMNHKTIITWTTMIAGLALHGLGKEALHVFSRMEKEGRVKPNEVTFIAVLCACSHVRLVE 383

Query: 233 MGWWYFNNMGSRFGMEPNIEHYGCMIDLLGRAGYLREAQELVRKMPFEANGAIWGSLLAA 54
            G  YF +M SR+G+EP +EHYGCMIDLLGRAG ++EA+ELV +MPFEAN AIWGSLLA+
Sbjct: 384 QGLNYFTSMRSRYGIEPKVEHYGCMIDLLGRAGLVQEAKELVSQMPFEANAAIWGSLLAS 443

Query: 53  SKIHGDPNLGELALQHL 3
           S   GD  L   AL+HL
Sbjct: 444 STRCGDAELAAEALRHL 460



 Score = 72.4 bits (176), Expect = 9e-11
 Identities = 44/156 (28%), Positives = 81/156 (51%), Gaps = 2/156 (1%)
 Frame = -1

Query: 473 NALIDMYAKSGNIKKALEVFESMKH--RSVITWTTIIXXXXXXXXXXXXXEMFSRMDRAR 300
           NA+I  YAK G++  A ++F+ M    ++V +WT +I             ++F RM    
Sbjct: 200 NAMIVGYAKVGDVFNAQKLFDKMPQMDKNVFSWTALISGYTQAHNPNEAIKLFRRMQLEN 259

Query: 299 IKPNEITFIAILHACSHVGLVDMGWWYFNNMGSRFGMEPNIEHYGCMIDLLGRAGYLREA 120
           +KP+EI  +A+L AC+ +G + +G W  N +  +  +   +  Y  +ID+  ++G + +A
Sbjct: 260 VKPDEIAILAVLSACADLGALHLGEWIHNYI-EKHKLNKIVPLYNSLIDMYAKSGNISKA 318

Query: 119 QELVRKMPFEANGAIWGSLLAASKIHGDPNLGELAL 12
            +L   M  +     W +++A   +HG   LG+ AL
Sbjct: 319 LKLFENMNHKTI-ITWTTMIAGLALHG---LGKEAL 350


>ref|XP_003556973.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g56310-like [Glycine max]
          Length = 580

 Score =  247 bits (630), Expect = 2e-63
 Identities = 122/198 (61%), Positives = 153/198 (77%), Gaps = 2/198 (1%)
 Frame = -1

Query: 590 EIAMLAALSACADLGALDLGQWIHNYIDKHG--FFGIVPLKNALIDMYAKSGNIKKALEV 417
           EIA+LA LSACADLGAL LG+WIHNYI+KH       VPL N+LIDMYAKSG+I KA ++
Sbjct: 292 EIAILAVLSACADLGALQLGEWIHNYIEKHNNKLRKTVPLCNSLIDMYAKSGDISKARQL 351

Query: 416 FESMKHRSVITWTTIIXXXXXXXXXXXXXEMFSRMDRARIKPNEITFIAILHACSHVGLV 237
           F++MKH+++ITWTT+I             ++FS M++AR+KPNE+T IA+L ACSHVGLV
Sbjct: 352 FQNMKHKTIITWTTVISGLALHGFGKEALDVFSCMEKARVKPNEVTLIAVLSACSHVGLV 411

Query: 236 DMGWWYFNNMGSRFGMEPNIEHYGCMIDLLGRAGYLREAQELVRKMPFEANGAIWGSLLA 57
           ++G   F +M S++G+EP IEHYGCMIDLLGRAGYL+EA ELVR MP EAN A+WGSLL+
Sbjct: 412 ELGRNIFTSMRSKYGIEPKIEHYGCMIDLLGRAGYLQEAMELVRVMPSEANAAVWGSLLS 471

Query: 56  ASKIHGDPNLGELALQHL 3
           AS  +GD  L   AL+HL
Sbjct: 472 ASNRYGDAALAAEALRHL 489



 Score = 73.9 bits (180), Expect = 3e-11
 Identities = 43/155 (27%), Positives = 78/155 (50%), Gaps = 3/155 (1%)
 Frame = -1

Query: 494 FGIVPLKNALIDMYAKSGNIKKALEVFESM--KHRSVITWTTIIXXXXXXXXXXXXXEMF 321
           F   PL NA++  YAK GN+  A  +FE M  K R V++WTT+I              +F
Sbjct: 221 FKHAPLWNAMLAGYAKVGNMSNARNLFECMPEKDRDVVSWTTLISGYTQTHSPNEAITLF 280

Query: 320 SRMDRARIKPNEITFIAILHACSHVGLVDMGWWYFNNMGSRFG-MEPNIEHYGCMIDLLG 144
             M    ++P+EI  +A+L AC+ +G + +G W  N +      +   +     +ID+  
Sbjct: 281 RIMLLQNVQPDEIAILAVLSACADLGALQLGEWIHNYIEKHNNKLRKTVPLCNSLIDMYA 340

Query: 143 RAGYLREAQELVRKMPFEANGAIWGSLLAASKIHG 39
           ++G + +A++L + M  +     W ++++   +HG
Sbjct: 341 KSGDISKARQLFQNMKHKTI-ITWTTVISGLALHG 374


>ref|XP_004971569.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g56310-like [Setaria italica]
          Length = 505

 Score =  246 bits (627), Expect = 4e-63
 Identities = 112/195 (57%), Positives = 150/195 (76%)
 Frame = -1

Query: 587 IAMLAALSACADLGALDLGQWIHNYIDKHGFFGIVPLKNALIDMYAKSGNIKKALEVFES 408
           +A+L+ LSAC DLGA+DLG+W+H ++ + G F  +PL NA+IDMY K G I+KA++VFE 
Sbjct: 211 VALLSVLSACGDLGAVDLGEWVHMFVVRRGLFQKIPLMNAIIDMYMKCGCIEKAVDVFEG 270

Query: 407 MKHRSVITWTTIIXXXXXXXXXXXXXEMFSRMDRARIKPNEITFIAILHACSHVGLVDMG 228
           M+ +SV+TWTT+I             EMF RM R  + PN++TF+A+L ACSHVGL D+G
Sbjct: 271 MQEKSVVTWTTLIAGFALHGLGLQAVEMFHRMVRENVAPNDVTFLAVLSACSHVGLTDLG 330

Query: 227 WWYFNNMGSRFGMEPNIEHYGCMIDLLGRAGYLREAQELVRKMPFEANGAIWGSLLAASK 48
            WYFN M S++GM+P +EHYGCM+D+LGRAG L+EAQ+LV++MPF+AN AIWG+LLAA++
Sbjct: 331 RWYFNVMVSQYGMKPCVEHYGCMVDILGRAGCLKEAQDLVQEMPFKANAAIWGALLAAAR 390

Query: 47  IHGDPNLGELALQHL 3
            HGD  LGE AL HL
Sbjct: 391 THGDAGLGEQALLHL 405



 Score = 67.4 bits (163), Expect = 3e-09
 Identities = 42/146 (28%), Positives = 74/146 (50%), Gaps = 1/146 (0%)
 Frame = -1

Query: 473 NALIDMYAKSGNIKKALEVFESMKHRSVITWTTIIXXXXXXXXXXXXXEMFSRMD-RARI 297
           N +I  Y KSG++ +A E+F+    R+V++WT +I             E+F RM     I
Sbjct: 147 NVMIAGYVKSGDLVRARELFDVTPKRNVVSWTIMIGAYAQMKQPEEAVEVFRRMQVEEGI 206

Query: 296 KPNEITFIAILHACSHVGLVDMGWWYFNNMGSRFGMEPNIEHYGCMIDLLGRAGYLREAQ 117
           +P+ +  +++L AC  +G VD+G W  +    R G+   I     +ID+  + G + +A 
Sbjct: 207 EPDGVALLSVLSACGDLGAVDLGEW-VHMFVVRRGLFQKIPLMNAIIDMYMKCGCIEKAV 265

Query: 116 ELVRKMPFEANGAIWGSLLAASKIHG 39
           ++   M  E +   W +L+A   +HG
Sbjct: 266 DVFEGMQ-EKSVVTWTTLIAGFALHG 290


>ref|XP_002864446.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297310281|gb|EFH40705.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 531

 Score =  244 bits (622), Expect = 2e-62
 Identities = 120/196 (61%), Positives = 149/196 (76%)
 Frame = -1

Query: 590 EIAMLAALSACADLGALDLGQWIHNYIDKHGFFGIVPLKNALIDMYAKSGNIKKALEVFE 411
           E+ +LA LSACADLG+L+LG+ I +Y+D  G    V L NA+IDMYAKSGNI KALEVFE
Sbjct: 250 EVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALEVFE 309

Query: 410 SMKHRSVITWTTIIXXXXXXXXXXXXXEMFSRMDRARIKPNEITFIAILHACSHVGLVDM 231
           S+  R+V+TWTTII              MF RM +A +KPN++TFIAIL ACSHVG VD+
Sbjct: 310 SVNERNVVTWTTIITGLATHGHGAEALVMFDRMVKAGVKPNDVTFIAILSACSHVGWVDL 369

Query: 230 GWWYFNNMGSRFGMEPNIEHYGCMIDLLGRAGYLREAQELVRKMPFEANGAIWGSLLAAS 51
           G  +FN+M S++G+ PNIEHYGCMIDLLGRAG LREA+E+++ MPFE+N AIWGSLLAAS
Sbjct: 370 GNRFFNSMRSKYGINPNIEHYGCMIDLLGRAGKLREAEEVIKSMPFESNAAIWGSLLAAS 429

Query: 50  KIHGDPNLGELALQHL 3
            +H D ++GE AL  L
Sbjct: 430 NVHHDIDVGERALYQL 445



 Score = 60.8 bits (146), Expect = 3e-07
 Identities = 39/147 (26%), Positives = 72/147 (48%), Gaps = 2/147 (1%)
 Frame = -1

Query: 473 NALIDMYAKSGNIKKALEVFESMKH--RSVITWTTIIXXXXXXXXXXXXXEMFSRMDRAR 300
           NAL+  Y K G + +A  + E M    R+ ++WT +I             E+F RM    
Sbjct: 186 NALLAGYGKVGEMDEARGLLEMMPCWVRNAVSWTCVISGYARSGRASEAIEVFQRMLMEN 245

Query: 299 IKPNEITFIAILHACSHVGLVDMGWWYFNNMGSRFGMEPNIEHYGCMIDLLGRAGYLREA 120
           + P+E+T +A+L AC+ +G +++G    + +  R GM   +     +ID+  ++G + +A
Sbjct: 246 VDPDEVTLLAVLSACADLGSLELGERICSYVDHR-GMNRAVSLNNAVIDMYAKSGNITKA 304

Query: 119 QELVRKMPFEANGAIWGSLLAASKIHG 39
            E+   +  E N   W +++     HG
Sbjct: 305 LEVFESVN-ERNVVTWTTIITGLATHG 330


>ref|XP_007153011.1| hypothetical protein PHAVU_003G000200g [Phaseolus vulgaris]
           gi|561026365|gb|ESW25005.1| hypothetical protein
           PHAVU_003G000200g [Phaseolus vulgaris]
          Length = 555

 Score =  241 bits (616), Expect = 8e-62
 Identities = 120/196 (61%), Positives = 150/196 (76%)
 Frame = -1

Query: 590 EIAMLAALSACADLGALDLGQWIHNYIDKHGFFGIVPLKNALIDMYAKSGNIKKALEVFE 411
           +IA+LAALSACADLGAL+LG WIH+YI++H    IV L N+LIDMYAKSG+I KA +VFE
Sbjct: 267 KIAILAALSACADLGALELGVWIHSYIERHKLPEIVSLCNSLIDMYAKSGDIGKARQVFE 326

Query: 410 SMKHRSVITWTTIIXXXXXXXXXXXXXEMFSRMDRARIKPNEITFIAILHACSHVGLVDM 231
            M+ ++++TWTT+I             E+FS M++A +KPNE+TFI IL ACSHVGLV++
Sbjct: 327 GMERKTIVTWTTMIGGLALHGMGKEALELFSCMEKAGVKPNEVTFITILSACSHVGLVEL 386

Query: 230 GWWYFNNMGSRFGMEPNIEHYGCMIDLLGRAGYLREAQELVRKMPFEANGAIWGSLLAAS 51
           G  YF  M  RFG+EP IEHYGCM+DLLGR GYL EA+ELVR MP EAN A+WGSLL+AS
Sbjct: 387 GRHYFTCMRKRFGIEPKIEHYGCMVDLLGRGGYLEEAKELVRLMPCEANAAVWGSLLSAS 446

Query: 50  KIHGDPNLGELALQHL 3
             +GD  L + AL+HL
Sbjct: 447 NRYGDVALAKEALRHL 462



 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 42/164 (25%), Positives = 82/164 (50%), Gaps = 2/164 (1%)
 Frame = -1

Query: 494 FGIVPLKNALIDMYAKSGNIKKALEVFESM--KHRSVITWTTIIXXXXXXXXXXXXXEMF 321
           F  V L NA++  YAK G++  A  +FE+M  K R V++WT +I              +F
Sbjct: 196 FQHVSLWNAMLAGYAKVGDLSNARNLFETMPEKDRDVVSWTCLISGYTRTHCPHQAITLF 255

Query: 320 SRMDRARIKPNEITFIAILHACSHVGLVDMGWWYFNNMGSRFGMEPNIEHYGCMIDLLGR 141
             M    ++P++I  +A L AC+ +G +++G W  + +  R  +   +     +ID+  +
Sbjct: 256 RTMLVHNVQPDKIAILAALSACADLGALELGVWIHSYI-ERHKLPEIVSLCNSLIDMYAK 314

Query: 140 AGYLREAQELVRKMPFEANGAIWGSLLAASKIHGDPNLGELALQ 9
           +G + +A+++   M        W +++    +HG   +G+ AL+
Sbjct: 315 SGDIGKARQVFEGME-RKTIVTWTTMIGGLALHG---MGKEALE 354


>ref|XP_002455392.1| hypothetical protein SORBIDRAFT_03g010050 [Sorghum bicolor]
           gi|241927367|gb|EES00512.1| hypothetical protein
           SORBIDRAFT_03g010050 [Sorghum bicolor]
          Length = 506

 Score =  240 bits (613), Expect = 2e-61
 Identities = 111/195 (56%), Positives = 148/195 (75%)
 Frame = -1

Query: 587 IAMLAALSACADLGALDLGQWIHNYIDKHGFFGIVPLKNALIDMYAKSGNIKKALEVFES 408
           +A+L+ LSAC DLGA+DLG+W+H ++ + G    +PL N++IDMY K G I+KA+EVFE 
Sbjct: 212 VALLSVLSACGDLGAVDLGEWVHRFVVRRGLRQEIPLMNSIIDMYMKCGCIEKAVEVFEG 271

Query: 407 MKHRSVITWTTIIXXXXXXXXXXXXXEMFSRMDRARIKPNEITFIAILHACSHVGLVDMG 228
           M+ +SV+TWTT+I             EMF RM+R  + PN++TF+AIL ACSHVGL D+G
Sbjct: 272 MEEKSVVTWTTLIAGFALHGLGLQAVEMFRRMERENMAPNDVTFLAILSACSHVGLTDLG 331

Query: 227 WWYFNNMGSRFGMEPNIEHYGCMIDLLGRAGYLREAQELVRKMPFEANGAIWGSLLAASK 48
            WYFN M S++ ++P +EHYGCM+DLLGRAG L+EAQ+LV+ MP +AN AIWG+LLAAS+
Sbjct: 332 RWYFNIMVSQYRIKPQVEHYGCMVDLLGRAGCLKEAQDLVKDMPLKANAAIWGALLAASR 391

Query: 47  IHGDPNLGELALQHL 3
            HGD +LGE AL HL
Sbjct: 392 THGDADLGEEALVHL 406



 Score = 78.6 bits (192), Expect = 1e-12
 Identities = 44/145 (30%), Positives = 76/145 (52%)
 Frame = -1

Query: 473 NALIDMYAKSGNIKKALEVFESMKHRSVITWTTIIXXXXXXXXXXXXXEMFSRMDRARIK 294
           N +I  Y K+G++  A E+F++M  R+V++WTT+I             E+F RM    I+
Sbjct: 149 NVMIAGYVKAGDLAHARELFDAMPERNVVSWTTVIGGYAQMRRPEEAVEVFRRMQVEGIE 208

Query: 293 PNEITFIAILHACSHVGLVDMGWWYFNNMGSRFGMEPNIEHYGCMIDLLGRAGYLREAQE 114
           P+ +  +++L AC  +G VD+G W  +    R G+   I     +ID+  + G + +A E
Sbjct: 209 PDGVALLSVLSACGDLGAVDLGEW-VHRFVVRRGLRQEIPLMNSIIDMYMKCGCIEKAVE 267

Query: 113 LVRKMPFEANGAIWGSLLAASKIHG 39
           +   M  E +   W +L+A   +HG
Sbjct: 268 VFEGME-EKSVVTWTTLIAGFALHG 291


>ref|NP_200442.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75171630|sp|Q9FMA1.1|PP433_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At5g56310 gi|10177829|dbj|BAB11258.1| unnamed protein
           product [Arabidopsis thaliana]
           gi|332009364|gb|AED96747.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 530

 Score =  239 bits (609), Expect = 5e-61
 Identities = 118/196 (60%), Positives = 146/196 (74%)
 Frame = -1

Query: 590 EIAMLAALSACADLGALDLGQWIHNYIDKHGFFGIVPLKNALIDMYAKSGNIKKALEVFE 411
           E+ +LA LSACADLG+L+LG+ I +Y+D  G    V L NA+IDMYAKSGNI KAL+VFE
Sbjct: 250 EVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFE 309

Query: 410 SMKHRSVITWTTIIXXXXXXXXXXXXXEMFSRMDRARIKPNEITFIAILHACSHVGLVDM 231
            +  R+V+TWTTII              MF+RM +A ++PN++TFIAIL ACSHVG VD+
Sbjct: 310 CVNERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDL 369

Query: 230 GWWYFNNMGSRFGMEPNIEHYGCMIDLLGRAGYLREAQELVRKMPFEANGAIWGSLLAAS 51
           G   FN+M S++G+ PNIEHYGCMIDLLGRAG LREA E+++ MPF+AN AIWGSLLAAS
Sbjct: 370 GKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAAS 429

Query: 50  KIHGDPNLGELALQHL 3
            +H D  LGE AL  L
Sbjct: 430 NVHHDLELGERALSEL 445



 Score = 60.8 bits (146), Expect = 3e-07
 Identities = 40/147 (27%), Positives = 74/147 (50%), Gaps = 2/147 (1%)
 Frame = -1

Query: 473 NALIDMYAKSGNIKKALEVFESMKH--RSVITWTTIIXXXXXXXXXXXXXEMFSRMDRAR 300
           NAL+  Y K G + +A  + E M    R+ ++WT +I             E+F RM    
Sbjct: 186 NALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMEN 245

Query: 299 IKPNEITFIAILHACSHVGLVDMGWWYFNNMGSRFGMEPNIEHYGCMIDLLGRAGYLREA 120
           ++P+E+T +A+L AC+ +G +++G    + +  R GM   +     +ID+  ++G + +A
Sbjct: 246 VEPDEVTLLAVLSACADLGSLELGERICSYVDHR-GMNRAVSLNNAVIDMYAKSGNITKA 304

Query: 119 QELVRKMPFEANGAIWGSLLAASKIHG 39
            + V +   E N   W +++A    HG
Sbjct: 305 LD-VFECVNERNVVTWTTIIAGLATHG 330


>gb|EMT16922.1| hypothetical protein F775_05289 [Aegilops tauschii]
          Length = 498

 Score =  239 bits (609), Expect = 5e-61
 Identities = 110/195 (56%), Positives = 143/195 (73%)
 Frame = -1

Query: 587 IAMLAALSACADLGALDLGQWIHNYIDKHGFFGIVPLKNALIDMYAKSGNIKKALEVFES 408
           IAML+ LSAC DLGA+DLG+W+H ++ K G    +PL NA+IDMY K G + KA+EVFE 
Sbjct: 204 IAMLSVLSACGDLGAVDLGEWVHRFVVKRGLCWHIPLMNAIIDMYLKCGCVAKAVEVFEG 263

Query: 407 MKHRSVITWTTIIXXXXXXXXXXXXXEMFSRMDRARIKPNEITFIAILHACSHVGLVDMG 228
           M  +S++TWTT+I             +MF RM+R  + PN+ITF+AIL  CSH+GL D+G
Sbjct: 264 MGQKSIVTWTTLIAGFALHGLGLEAVDMFRRMERENVAPNDITFLAILSVCSHIGLTDLG 323

Query: 227 WWYFNNMGSRFGMEPNIEHYGCMIDLLGRAGYLREAQELVRKMPFEANGAIWGSLLAASK 48
            WYF  M S++ ++P +EHYGCM+DLLGRAG L EAQ+LV+ MPF+AN AIWG+LLAA++
Sbjct: 324 RWYFQIMVSQYRIKPRVEHYGCMVDLLGRAGCLMEAQDLVKDMPFKANAAIWGALLAAAR 383

Query: 47  IHGDPNLGELALQHL 3
            HGD  LGE AL HL
Sbjct: 384 THGDAELGEQALLHL 398



 Score = 75.9 bits (185), Expect = 8e-12
 Identities = 47/146 (32%), Positives = 78/146 (53%), Gaps = 1/146 (0%)
 Frame = -1

Query: 473 NALIDMYAKSGNIKKALEVFESMKHRSVITWTTIIXXXXXXXXXXXXXEMFSRMD-RARI 297
           N  I  YAKSGN+ +A E+F++M  R+V++WTT+I             E+F RM     I
Sbjct: 140 NVTISGYAKSGNLDRARELFDAMPQRNVVSWTTLIGAYAQMKRPAEAVEVFRRMQVEEGI 199

Query: 296 KPNEITFIAILHACSHVGLVDMGWWYFNNMGSRFGMEPNIEHYGCMIDLLGRAGYLREAQ 117
           +P+ I  +++L AC  +G VD+G W    +  R G+  +I     +ID+  + G + +A 
Sbjct: 200 EPDGIAMLSVLSACGDLGAVDLGEWVHRFVVKR-GLCWHIPLMNAIIDMYLKCGCVAKAV 258

Query: 116 ELVRKMPFEANGAIWGSLLAASKIHG 39
           E+   M  + +   W +L+A   +HG
Sbjct: 259 EVFEGMG-QKSIVTWTTLIAGFALHG 283