BLASTX nr result
ID: Paeonia25_contig00042780
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Paeonia25_contig00042780
(381 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI28010.3| unnamed protein product [Vitis vinifera] 215 6e-54
ref|XP_002280491.1| PREDICTED: probable RNA-dependent RNA polyme... 215 6e-54
ref|XP_006381765.1| hypothetical protein POPTR_0006s17780g [Popu... 209 2e-52
ref|XP_006380470.1| hypothetical protein POPTR_0007s06560g [Popu... 206 2e-51
ref|XP_006380469.1| hypothetical protein POPTR_0007s06560g [Popu... 206 2e-51
gb|EXB59780.1| putative RNA-dependent RNA polymerase 3 [Morus no... 197 2e-48
ref|XP_002455002.1| hypothetical protein SORBIDRAFT_03g002800 [S... 194 1e-47
ref|XP_006451272.1| hypothetical protein CICLE_v10007331mg [Citr... 191 7e-47
ref|XP_006451271.1| hypothetical protein CICLE_v10007331mg [Citr... 191 7e-47
ref|XP_006408908.1| hypothetical protein EUTSA_v10001897mg [Eutr... 189 3e-46
ref|XP_006296898.1| hypothetical protein CARUB_v10012890mg [Caps... 187 1e-45
ref|XP_002883963.1| RNA-dependent RNA polymerase family protein ... 187 1e-45
gb|EMT15752.1| hypothetical protein F775_21992 [Aegilops tauschii] 186 2e-45
ref|XP_006853665.1| hypothetical protein AMTR_s00056p00110240 [A... 185 5e-45
sp|Q5QMN5.2|RDR3_ORYSJ RecName: Full=Probable RNA-dependent RNA ... 185 5e-45
gb|EEE54052.1| hypothetical protein OsJ_00745 [Oryza sativa Japo... 185 5e-45
gb|EEC70113.1| hypothetical protein OsI_00772 [Oryza sativa Indi... 185 5e-45
ref|NP_179583.3| probable RNA-dependent RNA polymerase 5 [Arabid... 184 9e-45
gb|AAC62123.1| hypothetical protein [Arabidopsis thaliana] 184 9e-45
ref|NP_179581.2| probable RNA-dependent RNA polymerase 3 [Arabid... 183 2e-44
>emb|CBI28010.3| unnamed protein product [Vitis vinifera]
Length = 929
Score = 215 bits (547), Expect = 6e-54
Identities = 100/126 (79%), Positives = 115/126 (91%)
Frame = -2
Query: 380 PFLQHRLSILKNEERKGLKGGRLPVSECYYLMGTADPTGLLESDQVCIILDNGQISGKVL 201
PFL H LS + NEERKGL+ G+LPV++C+YLMGTADPTG L+SD+VCIILD+GQ+ G+VL
Sbjct: 522 PFLHHCLSFMVNEERKGLRVGKLPVNDCFYLMGTADPTGTLKSDEVCIILDHGQVQGRVL 581
Query: 200 VYKHPGLHFGDIHVLNATYVKAMSDFVGNAKYAIFFPIKGRRSLADEMANSDLDGDMYFV 21
VYKHPGLHFGDIHVLNATYV+A+ +FVGNAKYAIFFPIKG RSLADEMANSD DGDMY+V
Sbjct: 582 VYKHPGLHFGDIHVLNATYVEALEEFVGNAKYAIFFPIKGPRSLADEMANSDFDGDMYWV 641
Query: 20 SRNPQL 3
SRN QL
Sbjct: 642 SRNQQL 647
>ref|XP_002280491.1| PREDICTED: probable RNA-dependent RNA polymerase 5-like [Vitis
vinifera]
Length = 943
Score = 215 bits (547), Expect = 6e-54
Identities = 100/126 (79%), Positives = 115/126 (91%)
Frame = -2
Query: 380 PFLQHRLSILKNEERKGLKGGRLPVSECYYLMGTADPTGLLESDQVCIILDNGQISGKVL 201
PFL H LS + NEERKGL+ G+LPV++C+YLMGTADPTG L+SD+VCIILD+GQ+ G+VL
Sbjct: 536 PFLHHCLSFMVNEERKGLRVGKLPVNDCFYLMGTADPTGTLKSDEVCIILDHGQVQGRVL 595
Query: 200 VYKHPGLHFGDIHVLNATYVKAMSDFVGNAKYAIFFPIKGRRSLADEMANSDLDGDMYFV 21
VYKHPGLHFGDIHVLNATYV+A+ +FVGNAKYAIFFPIKG RSLADEMANSD DGDMY+V
Sbjct: 596 VYKHPGLHFGDIHVLNATYVEALEEFVGNAKYAIFFPIKGPRSLADEMANSDFDGDMYWV 655
Query: 20 SRNPQL 3
SRN QL
Sbjct: 656 SRNQQL 661
>ref|XP_006381765.1| hypothetical protein POPTR_0006s17780g [Populus trichocarpa]
gi|550336519|gb|ERP59562.1| hypothetical protein
POPTR_0006s17780g [Populus trichocarpa]
Length = 866
Score = 209 bits (533), Expect = 2e-52
Identities = 97/126 (76%), Positives = 112/126 (88%)
Frame = -2
Query: 380 PFLQHRLSILKNEERKGLKGGRLPVSECYYLMGTADPTGLLESDQVCIILDNGQISGKVL 201
P+LQH LSILK EE+K LKGG++PV E YYLMGTADPTGLLESD+VCIILD GQ+SG+VL
Sbjct: 469 PYLQHHLSILKKEEKKSLKGGKIPVPESYYLMGTADPTGLLESDEVCIILDCGQVSGEVL 528
Query: 200 VYKHPGLHFGDIHVLNATYVKAMSDFVGNAKYAIFFPIKGRRSLADEMANSDLDGDMYFV 21
VY++PGLHFGDIH+L ATYV+ + DFVGNAKYAIFFP KG RSLADEM+ D DGDM+FV
Sbjct: 529 VYRNPGLHFGDIHILKATYVRELEDFVGNAKYAIFFPCKGPRSLADEMSGGDFDGDMFFV 588
Query: 20 SRNPQL 3
SRNP+L
Sbjct: 589 SRNPRL 594
>ref|XP_006380470.1| hypothetical protein POPTR_0007s06560g [Populus trichocarpa]
gi|550334280|gb|ERP58267.1| hypothetical protein
POPTR_0007s06560g [Populus trichocarpa]
Length = 877
Score = 206 bits (525), Expect = 2e-51
Identities = 97/126 (76%), Positives = 111/126 (88%)
Frame = -2
Query: 380 PFLQHRLSILKNEERKGLKGGRLPVSECYYLMGTADPTGLLESDQVCIILDNGQISGKVL 201
P+LQ RLSIL EE+K LKGG++PV E YYLMGTADPTGLLESD+VCIILD GQISG+VL
Sbjct: 469 PYLQCRLSILMKEEKKSLKGGKIPVPESYYLMGTADPTGLLESDEVCIILDCGQISGEVL 528
Query: 200 VYKHPGLHFGDIHVLNATYVKAMSDFVGNAKYAIFFPIKGRRSLADEMANSDLDGDMYFV 21
+Y++PGLHFGDIH+L ATYV+ + DFVGNAKYAIFFP KG RSLADEM+ D DGDM+FV
Sbjct: 529 IYRNPGLHFGDIHILKATYVRELEDFVGNAKYAIFFPCKGPRSLADEMSGGDFDGDMFFV 588
Query: 20 SRNPQL 3
SRNPQL
Sbjct: 589 SRNPQL 594
>ref|XP_006380469.1| hypothetical protein POPTR_0007s06560g [Populus trichocarpa]
gi|550334279|gb|ERP58266.1| hypothetical protein
POPTR_0007s06560g [Populus trichocarpa]
Length = 899
Score = 206 bits (525), Expect = 2e-51
Identities = 97/126 (76%), Positives = 111/126 (88%)
Frame = -2
Query: 380 PFLQHRLSILKNEERKGLKGGRLPVSECYYLMGTADPTGLLESDQVCIILDNGQISGKVL 201
P+LQ RLSIL EE+K LKGG++PV E YYLMGTADPTGLLESD+VCIILD GQISG+VL
Sbjct: 491 PYLQCRLSILMKEEKKSLKGGKIPVPESYYLMGTADPTGLLESDEVCIILDCGQISGEVL 550
Query: 200 VYKHPGLHFGDIHVLNATYVKAMSDFVGNAKYAIFFPIKGRRSLADEMANSDLDGDMYFV 21
+Y++PGLHFGDIH+L ATYV+ + DFVGNAKYAIFFP KG RSLADEM+ D DGDM+FV
Sbjct: 551 IYRNPGLHFGDIHILKATYVRELEDFVGNAKYAIFFPCKGPRSLADEMSGGDFDGDMFFV 610
Query: 20 SRNPQL 3
SRNPQL
Sbjct: 611 SRNPQL 616
>gb|EXB59780.1| putative RNA-dependent RNA polymerase 3 [Morus notabilis]
Length = 521
Score = 197 bits (500), Expect = 2e-48
Identities = 91/126 (72%), Positives = 107/126 (84%)
Frame = -2
Query: 380 PFLQHRLSILKNEERKGLKGGRLPVSECYYLMGTADPTGLLESDQVCIILDNGQISGKVL 201
P+LQHRL +L EERK L+GGRL V +C+YLMGTADPTG LE D+VCI+L NGQ+SGKVL
Sbjct: 96 PYLQHRLFVLVKEERKSLRGGRLHVDDCFYLMGTADPTGKLEHDEVCIVLANGQVSGKVL 155
Query: 200 VYKHPGLHFGDIHVLNATYVKAMSDFVGNAKYAIFFPIKGRRSLADEMANSDLDGDMYFV 21
VY++PGLHFGDIHVL ATY++ M FVGNAKYAIFF KG RS+ADEMA D DGDM++V
Sbjct: 156 VYRNPGLHFGDIHVLKATYIEEMESFVGNAKYAIFFSKKGPRSIADEMAGGDFDGDMFWV 215
Query: 20 SRNPQL 3
SRNP+L
Sbjct: 216 SRNPEL 221
>ref|XP_002455002.1| hypothetical protein SORBIDRAFT_03g002800 [Sorghum bicolor]
gi|241926977|gb|EES00122.1| hypothetical protein
SORBIDRAFT_03g002800 [Sorghum bicolor]
Length = 1127
Score = 194 bits (492), Expect = 1e-47
Identities = 89/125 (71%), Positives = 105/125 (84%)
Frame = -2
Query: 377 FLQHRLSILKNEERKGLKGGRLPVSECYYLMGTADPTGLLESDQVCIILDNGQISGKVLV 198
+LQ +L+++ ERKGLK GR+P+ + YYLMGT DPTG L+ DQVCIILDNGQ+SGKVLV
Sbjct: 714 YLQSQLALMAKVERKGLKEGRIPIDDTYYLMGTTDPTGTLKRDQVCIILDNGQLSGKVLV 773
Query: 197 YKHPGLHFGDIHVLNATYVKAMSDFVGNAKYAIFFPIKGRRSLADEMANSDLDGDMYFVS 18
YKHPGLHFGDIH+L ATY+ + VGN+KYAIFFP G RSLADEMANSD DGD+Y+VS
Sbjct: 774 YKHPGLHFGDIHILTATYIDGLEKIVGNSKYAIFFPTCGPRSLADEMANSDFDGDLYWVS 833
Query: 17 RNPQL 3
RNPQL
Sbjct: 834 RNPQL 838
>ref|XP_006451272.1| hypothetical protein CICLE_v10007331mg [Citrus clementina]
gi|568843311|ref|XP_006475557.1| PREDICTED: probable
RNA-dependent RNA polymerase 3-like isoform X2 [Citrus
sinensis] gi|557554498|gb|ESR64512.1| hypothetical
protein CICLE_v10007331mg [Citrus clementina]
Length = 1013
Score = 191 bits (486), Expect = 7e-47
Identities = 91/127 (71%), Positives = 108/127 (85%), Gaps = 1/127 (0%)
Frame = -2
Query: 380 PFLQHRLSILKNEERKGLKGGRLPVSECYYLMGTADPTGLLESDQVCIILDNGQISG-KV 204
P+LQHRLSIL EE+K L+ G+LPV+E YYLMGT DPTG+L+S++VCIIL +GQ+S KV
Sbjct: 604 PYLQHRLSILMKEEKKSLQAGKLPVTESYYLMGTVDPTGILKSNEVCIILKDGQVSWEKV 663
Query: 203 LVYKHPGLHFGDIHVLNATYVKAMSDFVGNAKYAIFFPIKGRRSLADEMANSDLDGDMYF 24
LVY++PGLHFGDIHVL ATYVK + DFVG +KYAIFFP G RSLADE+A D DGDMYF
Sbjct: 664 LVYRNPGLHFGDIHVLKATYVKELEDFVGTSKYAIFFPCNGPRSLADEIAGGDFDGDMYF 723
Query: 23 VSRNPQL 3
VSRNP+L
Sbjct: 724 VSRNPEL 730
>ref|XP_006451271.1| hypothetical protein CICLE_v10007331mg [Citrus clementina]
gi|568843309|ref|XP_006475556.1| PREDICTED: probable
RNA-dependent RNA polymerase 3-like isoform X1 [Citrus
sinensis] gi|557554497|gb|ESR64511.1| hypothetical
protein CICLE_v10007331mg [Citrus clementina]
Length = 1015
Score = 191 bits (486), Expect = 7e-47
Identities = 91/127 (71%), Positives = 108/127 (85%), Gaps = 1/127 (0%)
Frame = -2
Query: 380 PFLQHRLSILKNEERKGLKGGRLPVSECYYLMGTADPTGLLESDQVCIILDNGQISG-KV 204
P+LQHRLSIL EE+K L+ G+LPV+E YYLMGT DPTG+L+S++VCIIL +GQ+S KV
Sbjct: 606 PYLQHRLSILMKEEKKSLQAGKLPVTESYYLMGTVDPTGILKSNEVCIILKDGQVSWEKV 665
Query: 203 LVYKHPGLHFGDIHVLNATYVKAMSDFVGNAKYAIFFPIKGRRSLADEMANSDLDGDMYF 24
LVY++PGLHFGDIHVL ATYVK + DFVG +KYAIFFP G RSLADE+A D DGDMYF
Sbjct: 666 LVYRNPGLHFGDIHVLKATYVKELEDFVGTSKYAIFFPCNGPRSLADEIAGGDFDGDMYF 725
Query: 23 VSRNPQL 3
VSRNP+L
Sbjct: 726 VSRNPEL 732
>ref|XP_006408908.1| hypothetical protein EUTSA_v10001897mg [Eutrema salsugineum]
gi|557110064|gb|ESQ50361.1| hypothetical protein
EUTSA_v10001897mg [Eutrema salsugineum]
Length = 988
Score = 189 bits (480), Expect = 3e-46
Identities = 87/126 (69%), Positives = 106/126 (84%)
Frame = -2
Query: 380 PFLQHRLSILKNEERKGLKGGRLPVSECYYLMGTADPTGLLESDQVCIILDNGQISGKVL 201
P L+ RLSIL N E+ LK GRLPV+E YYLMGT DPTG L+ D+VC+IL++GQISG VL
Sbjct: 583 PHLKDRLSILSNIEKNDLKAGRLPVTESYYLMGTVDPTGELKEDEVCVILESGQISGDVL 642
Query: 200 VYKHPGLHFGDIHVLNATYVKAMSDFVGNAKYAIFFPIKGRRSLADEMANSDLDGDMYFV 21
VY++PG+HFGDIHVL ATYVKA+ ++VGN+KYA+FFP KG RSL DE+A D DGDMYF+
Sbjct: 643 VYRNPGVHFGDIHVLKATYVKALEEYVGNSKYAVFFPQKGPRSLGDEIAGGDFDGDMYFI 702
Query: 20 SRNPQL 3
SRNP+L
Sbjct: 703 SRNPEL 708
>ref|XP_006296898.1| hypothetical protein CARUB_v10012890mg [Capsella rubella]
gi|482565607|gb|EOA29796.1| hypothetical protein
CARUB_v10012890mg [Capsella rubella]
Length = 998
Score = 187 bits (476), Expect = 1e-45
Identities = 87/126 (69%), Positives = 103/126 (81%)
Frame = -2
Query: 380 PFLQHRLSILKNEERKGLKGGRLPVSECYYLMGTADPTGLLESDQVCIILDNGQISGKVL 201
P L+ RLSIL E+ LK GRLP+ E YYLMGT DPTG L+ ++VC+IL+ GQISG VL
Sbjct: 588 PHLKDRLSILLKTEKNALKEGRLPIGESYYLMGTVDPTGELKENEVCVILETGQISGNVL 647
Query: 200 VYKHPGLHFGDIHVLNATYVKAMSDFVGNAKYAIFFPIKGRRSLADEMANSDLDGDMYFV 21
VY++PGLHFGDIHVL ATYVKA+ D+VGN+KYA+FFP KG RSL DE+A D DGDMYF+
Sbjct: 648 VYRNPGLHFGDIHVLKATYVKALEDYVGNSKYAVFFPQKGPRSLGDEIAGGDFDGDMYFI 707
Query: 20 SRNPQL 3
SRNPQL
Sbjct: 708 SRNPQL 713
>ref|XP_002883963.1| RNA-dependent RNA polymerase family protein [Arabidopsis lyrata
subsp. lyrata] gi|297329803|gb|EFH60222.1| RNA-dependent
RNA polymerase family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 981
Score = 187 bits (475), Expect = 1e-45
Identities = 85/126 (67%), Positives = 106/126 (84%)
Frame = -2
Query: 380 PFLQHRLSILKNEERKGLKGGRLPVSECYYLMGTADPTGLLESDQVCIILDNGQISGKVL 201
P L++ LSIL E+ LK GRLPV+E YYLMGT DPTG L+ D+VC+IL++GQISG+VL
Sbjct: 575 PHLKNHLSILLKTEKNDLKAGRLPVTESYYLMGTVDPTGELKEDEVCVILESGQISGEVL 634
Query: 200 VYKHPGLHFGDIHVLNATYVKAMSDFVGNAKYAIFFPIKGRRSLADEMANSDLDGDMYFV 21
VY++PGLHFGDIH+L ATYVKA+ ++VGN+KYA+FFP KG RSL DE+A D DGDMYF+
Sbjct: 635 VYRNPGLHFGDIHILKATYVKALEEYVGNSKYAVFFPQKGPRSLGDEIAGGDFDGDMYFI 694
Query: 20 SRNPQL 3
SRNP+L
Sbjct: 695 SRNPEL 700
>gb|EMT15752.1| hypothetical protein F775_21992 [Aegilops tauschii]
Length = 470
Score = 186 bits (473), Expect = 2e-45
Identities = 84/124 (67%), Positives = 104/124 (83%)
Frame = -2
Query: 377 FLQHRLSILKNEERKGLKGGRLPVSECYYLMGTADPTGLLESDQVCIILDNGQISGKVLV 198
+LQH+L+ + EER+G K GRLPV +CYYLMGT DPTG L+ +VC+ILD+G ISG+VLV
Sbjct: 21 YLQHQLTTMTKEEREGFKQGRLPVDQCYYLMGTTDPTGTLKPHEVCVILDHGPISGEVLV 80
Query: 197 YKHPGLHFGDIHVLNATYVKAMSDFVGNAKYAIFFPIKGRRSLADEMANSDLDGDMYFVS 18
Y+HPGLHFGDIHVL ATY +A+ DFVG++K+AI FP+ G RSLA+EMA D DGDMY+VS
Sbjct: 81 YRHPGLHFGDIHVLTATYSEAIQDFVGDSKFAILFPVSGPRSLANEMAGGDFDGDMYWVS 140
Query: 17 RNPQ 6
RNPQ
Sbjct: 141 RNPQ 144
>ref|XP_006853665.1| hypothetical protein AMTR_s00056p00110240 [Amborella trichopoda]
gi|548857326|gb|ERN15132.1| hypothetical protein
AMTR_s00056p00110240 [Amborella trichopoda]
Length = 988
Score = 185 bits (470), Expect = 5e-45
Identities = 86/126 (68%), Positives = 105/126 (83%)
Frame = -2
Query: 380 PFLQHRLSILKNEERKGLKGGRLPVSECYYLMGTADPTGLLESDQVCIILDNGQISGKVL 201
P+LQHRLSIL EERKGLK G++ + YYLMGTADPTG L+ ++VCIILD+GQISGKVL
Sbjct: 584 PYLQHRLSILMKEERKGLKEGKVLLPNSYYLMGTADPTGKLKGNEVCIILDHGQISGKVL 643
Query: 200 VYKHPGLHFGDIHVLNATYVKAMSDFVGNAKYAIFFPIKGRRSLADEMANSDLDGDMYFV 21
VY+HPGLHFGDIHV ATY++ + + VGNAK+AIFF +G RS ADE+AN D DGDMY++
Sbjct: 644 VYRHPGLHFGDIHVFTATYIEDLVEIVGNAKFAIFFSTQGPRSAADEIANGDFDGDMYWI 703
Query: 20 SRNPQL 3
S NP+L
Sbjct: 704 STNPEL 709
>sp|Q5QMN5.2|RDR3_ORYSJ RecName: Full=Probable RNA-dependent RNA polymerase 3; Short=OsRDR3
Length = 1153
Score = 185 bits (470), Expect = 5e-45
Identities = 84/126 (66%), Positives = 104/126 (82%), Gaps = 1/126 (0%)
Frame = -2
Query: 377 FLQHRLSILKNEERKGLKGGRLPVSECYYLMGTADPTGLLESDQVCIILDNGQISGKVLV 198
+LQHRL + +ERKG+K G++P+ ECYYLM T DPTG L ++VC+IL+NGQ SG VLV
Sbjct: 746 YLQHRLDFMAQQERKGIKQGKIPIDECYYLMDTTDPTGTLRPNEVCVILENGQFSGDVLV 805
Query: 197 YKHPGLHFGDIHVLNATYVKAM-SDFVGNAKYAIFFPIKGRRSLADEMANSDLDGDMYFV 21
YKHPGLHFGDIHVL ATY++ + ++VG AKYAI FPI G RSLADEMANSD DGD+Y+V
Sbjct: 806 YKHPGLHFGDIHVLKATYIRDLEKEYVGYAKYAILFPISGPRSLADEMANSDFDGDIYWV 865
Query: 20 SRNPQL 3
S+NP+L
Sbjct: 866 SKNPKL 871
>gb|EEE54052.1| hypothetical protein OsJ_00745 [Oryza sativa Japonica Group]
Length = 1243
Score = 185 bits (470), Expect = 5e-45
Identities = 84/126 (66%), Positives = 104/126 (82%), Gaps = 1/126 (0%)
Frame = -2
Query: 377 FLQHRLSILKNEERKGLKGGRLPVSECYYLMGTADPTGLLESDQVCIILDNGQISGKVLV 198
+LQHRL + +ERKG+K G++P+ ECYYLM T DPTG L ++VC+IL+NGQ SG VLV
Sbjct: 827 YLQHRLDFMAQQERKGIKQGKIPIDECYYLMDTTDPTGTLRPNEVCVILENGQFSGDVLV 886
Query: 197 YKHPGLHFGDIHVLNATYVKAM-SDFVGNAKYAIFFPIKGRRSLADEMANSDLDGDMYFV 21
YKHPGLHFGDIHVL ATY++ + ++VG AKYAI FPI G RSLADEMANSD DGD+Y+V
Sbjct: 887 YKHPGLHFGDIHVLKATYIRDLEKEYVGYAKYAILFPISGPRSLADEMANSDFDGDIYWV 946
Query: 20 SRNPQL 3
S+NP+L
Sbjct: 947 SKNPKL 952
>gb|EEC70113.1| hypothetical protein OsI_00772 [Oryza sativa Indica Group]
Length = 1155
Score = 185 bits (470), Expect = 5e-45
Identities = 84/126 (66%), Positives = 104/126 (82%), Gaps = 1/126 (0%)
Frame = -2
Query: 377 FLQHRLSILKNEERKGLKGGRLPVSECYYLMGTADPTGLLESDQVCIILDNGQISGKVLV 198
+LQHRL + +ERKG+K G++P+ ECYYLM T DPTG L ++VC+IL+NGQ SG VLV
Sbjct: 766 YLQHRLDFMAQQERKGIKQGKIPIDECYYLMDTTDPTGTLRPNEVCVILENGQFSGDVLV 825
Query: 197 YKHPGLHFGDIHVLNATYVKAM-SDFVGNAKYAIFFPIKGRRSLADEMANSDLDGDMYFV 21
YKHPGLHFGDIHVL ATY++ + ++VG AKYAI FPI G RSLADEMANSD DGD+Y+V
Sbjct: 826 YKHPGLHFGDIHVLKATYIRDLEKEYVGYAKYAILFPISGPRSLADEMANSDFDGDIYWV 885
Query: 20 SRNPQL 3
S+NP+L
Sbjct: 886 SKNPKL 891
>ref|NP_179583.3| probable RNA-dependent RNA polymerase 5 [Arabidopsis thaliana]
gi|322967572|sp|O82188.2|RDR5_ARATH RecName:
Full=Probable RNA-dependent RNA polymerase 5;
Short=AtRDRP5; AltName: Full=RNA-directed RNA polymerase
5 gi|330251850|gb|AEC06944.1| probable RNA-dependent RNA
polymerase 5 [Arabidopsis thaliana]
Length = 977
Score = 184 bits (468), Expect = 9e-45
Identities = 83/126 (65%), Positives = 106/126 (84%)
Frame = -2
Query: 380 PFLQHRLSILKNEERKGLKGGRLPVSECYYLMGTADPTGLLESDQVCIILDNGQISGKVL 201
P L++ LSIL E+ LK G+LPV+E YYLMGT DPTG L+ D+VC+IL++GQISG+VL
Sbjct: 571 PHLKNYLSILLKTEKNDLKAGKLPVTESYYLMGTVDPTGALKEDEVCVILESGQISGEVL 630
Query: 200 VYKHPGLHFGDIHVLNATYVKAMSDFVGNAKYAIFFPIKGRRSLADEMANSDLDGDMYFV 21
VY++PGLHFGDIH+L ATYVKA+ ++VGN+K+A+FFP KG RSL DE+A D DGDMYF+
Sbjct: 631 VYRNPGLHFGDIHILKATYVKALEEYVGNSKFAVFFPQKGPRSLGDEIAGGDFDGDMYFI 690
Query: 20 SRNPQL 3
SRNP+L
Sbjct: 691 SRNPEL 696
>gb|AAC62123.1| hypothetical protein [Arabidopsis thaliana]
Length = 929
Score = 184 bits (468), Expect = 9e-45
Identities = 83/126 (65%), Positives = 106/126 (84%)
Frame = -2
Query: 380 PFLQHRLSILKNEERKGLKGGRLPVSECYYLMGTADPTGLLESDQVCIILDNGQISGKVL 201
P L++ LSIL E+ LK G+LPV+E YYLMGT DPTG L+ D+VC+IL++GQISG+VL
Sbjct: 491 PHLKNYLSILLKTEKNDLKAGKLPVTESYYLMGTVDPTGALKEDEVCVILESGQISGEVL 550
Query: 200 VYKHPGLHFGDIHVLNATYVKAMSDFVGNAKYAIFFPIKGRRSLADEMANSDLDGDMYFV 21
VY++PGLHFGDIH+L ATYVKA+ ++VGN+K+A+FFP KG RSL DE+A D DGDMYF+
Sbjct: 551 VYRNPGLHFGDIHILKATYVKALEEYVGNSKFAVFFPQKGPRSLGDEIAGGDFDGDMYFI 610
Query: 20 SRNPQL 3
SRNP+L
Sbjct: 611 SRNPEL 616
>ref|NP_179581.2| probable RNA-dependent RNA polymerase 3 [Arabidopsis thaliana]
gi|322967566|sp|O82190.2|RDR3_ARATH RecName:
Full=Probable RNA-dependent RNA polymerase 3;
Short=AtRDRP3; AltName: Full=RNA-directed RNA polymerase
3 gi|330251848|gb|AEC06942.1| probable RNA-dependent RNA
polymerase 3 [Arabidopsis thaliana]
Length = 992
Score = 183 bits (465), Expect = 2e-44
Identities = 83/126 (65%), Positives = 102/126 (80%)
Frame = -2
Query: 380 PFLQHRLSILKNEERKGLKGGRLPVSECYYLMGTADPTGLLESDQVCIILDNGQISGKVL 201
P+L+ RLS L ER LK GR P+ E YY+MGT DPTG L+ +++C+IL +GQISG VL
Sbjct: 582 PYLKDRLSYLLKTERNALKAGRFPIDESYYIMGTVDPTGELKENEICVILHSGQISGDVL 641
Query: 200 VYKHPGLHFGDIHVLNATYVKAMSDFVGNAKYAIFFPIKGRRSLADEMANSDLDGDMYFV 21
VY++PGLHFGDIHVL ATYVKA+ D+VGNAK+A+FFP KG RSL DE+A D DGDMYF+
Sbjct: 642 VYRNPGLHFGDIHVLKATYVKALEDYVGNAKFAVFFPQKGPRSLGDEIAGGDFDGDMYFI 701
Query: 20 SRNPQL 3
SRNP+L
Sbjct: 702 SRNPKL 707