BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia25_contig00038970
         (800 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006381426.1| RNA POLYMERASE SIGMA-70 FACTOR family protei...   357   4e-96
ref|XP_002519509.1| RNA polymerase sigma factor rpoD, putative [...   356   6e-96
ref|XP_007204994.1| hypothetical protein PRUPE_ppa003513mg [Prun...   353   3e-95
ref|XP_002276710.2| PREDICTED: RNA polymerase sigma factor rpoD ...   351   2e-94
emb|CBI32760.3| unnamed protein product [Vitis vinifera]              351   2e-94
ref|XP_004246643.1| PREDICTED: RNA polymerase sigma factor sigF,...   349   6e-94
ref|XP_006354351.1| PREDICTED: RNA polymerase sigma factor sigF,...   347   2e-93
ref|NP_565856.1| RNA polymerase sigma factor sigF [Arabidopsis t...   346   5e-93
emb|CAB60192.1| putative sigma-like transcription factor [Arabid...   346   5e-93
ref|XP_006604578.1| PREDICTED: RNA polymerase sigma factor sigF,...   344   2e-92
ref|XP_002881484.1| RNA polymerase sigma-70 factor [Arabidopsis ...   344   2e-92
ref|XP_006410875.1| hypothetical protein EUTSA_v10016472mg [Eutr...   343   3e-92
ref|XP_006410876.1| hypothetical protein EUTSA_v10016472mg [Eutr...   343   3e-92
ref|XP_006493036.1| PREDICTED: RNA polymerase sigma factor sigF,...   343   4e-92
ref|XP_006493035.1| PREDICTED: RNA polymerase sigma factor sigF,...   343   4e-92
ref|XP_006493034.1| PREDICTED: RNA polymerase sigma factor sigF,...   343   4e-92
ref|XP_006428732.1| hypothetical protein CICLE_v10011376mg [Citr...   343   4e-92
ref|XP_006428731.1| hypothetical protein CICLE_v10011376mg [Citr...   343   4e-92
ref|XP_006428730.1| hypothetical protein CICLE_v10011376mg [Citr...   343   4e-92
ref|XP_006577030.1| PREDICTED: RNA polymerase sigma factor sigF,...   342   1e-91

>ref|XP_006381426.1| RNA POLYMERASE SIGMA-70 FACTOR family protein [Populus trichocarpa]
            gi|550336129|gb|ERP59223.1| RNA POLYMERASE SIGMA-70
            FACTOR family protein [Populus trichocarpa]
          Length = 535

 Score =  357 bits (915), Expect = 4e-96
 Identities = 176/246 (71%), Positives = 206/246 (83%)
 Frame = +1

Query: 1    LHSGNRCREKLICANFRMVVHIAKHYQGRGLSLQDLMQEGSLGLMKSVAKFKTQAGCRFA 180
            LHSGNR REKLI AN RMVVHIAK YQ RGL LQDL+QEG++GLMKS+ KFK QAGCRFA
Sbjct: 289  LHSGNRSREKLINANLRMVVHIAKRYQNRGLGLQDLLQEGTVGLMKSIEKFKPQAGCRFA 348

Query: 181  TYAYWWIRQSVRKAVFQHSRTIRLPDNVYALLGKITEAKRSFFQEAQRRPTNEELAARVG 360
            TYAYWWIRQ++ KA+FQHSRTIRLP+NVY LLGK+ EAKRS+ QE   +PT EE+A RVG
Sbjct: 349  TYAYWWIRQTITKAIFQHSRTIRLPENVYGLLGKVMEAKRSYIQEGNHQPTAEEIARRVG 408

Query: 361  VTVERLDCLLSSARTPLSMQQPVWTDQATTFQEITADTRVETPEVMVTKQLMRQHVRNLL 540
            + +++L+ LL   RTPLSMQQ VW+DQ TTFQEITADT +E P++ V KQLMR+H+R LL
Sbjct: 409  IAIDKLEKLLCFTRTPLSMQQTVWSDQNTTFQEITADTEIEIPDMSVAKQLMRKHIRGLL 468

Query: 541  SILSPKERRIIRMRFGIEGFKQTSLADIGAGFGLSKERVRQLESRALYKLKQRLGDQGLE 720
            +ILS KERRIIR+RFGIE  KQ SL++IG  FGLSKERVRQLESRALYKLKQ +G  GL+
Sbjct: 469  NILSLKERRIIRLRFGIEDGKQKSLSEIGNVFGLSKERVRQLESRALYKLKQCVGSHGLD 528

Query: 721  DYSSLL 738
             Y+ LL
Sbjct: 529  AYADLL 534


>ref|XP_002519509.1| RNA polymerase sigma factor rpoD, putative [Ricinus communis]
            gi|223541372|gb|EEF42923.1| RNA polymerase sigma factor
            rpoD, putative [Ricinus communis]
          Length = 548

 Score =  356 bits (913), Expect = 6e-96
 Identities = 178/246 (72%), Positives = 204/246 (82%)
 Frame = +1

Query: 1    LHSGNRCREKLICANFRMVVHIAKHYQGRGLSLQDLMQEGSLGLMKSVAKFKTQAGCRFA 180
            LHSGNR REKLI AN RMVVHIAK YQGRGLSLQDL+QEGS+GLMKS+ KFK Q GCRFA
Sbjct: 302  LHSGNRSREKLINANLRMVVHIAKQYQGRGLSLQDLLQEGSMGLMKSIEKFKPQVGCRFA 361

Query: 181  TYAYWWIRQSVRKAVFQHSRTIRLPDNVYALLGKITEAKRSFFQEAQRRPTNEELAARVG 360
            TYAYWWIRQ+VRKA+FQHSRTIRLP+NVY  LGK++EAKRS+  E    PT EELA R+G
Sbjct: 362  TYAYWWIRQTVRKAIFQHSRTIRLPENVYHTLGKVSEAKRSYIMEGNHNPTKEELAKRIG 421

Query: 361  VTVERLDCLLSSARTPLSMQQPVWTDQATTFQEITADTRVETPEVMVTKQLMRQHVRNLL 540
            +T  RL+ LL  AR PLSMQQ VW DQ TTFQEITAD  VE PE+ V KQLMR+HV +LL
Sbjct: 422  ITTVRLERLLYMARMPLSMQQTVWADQETTFQEITADIEVEIPELCVAKQLMRKHVLSLL 481

Query: 541  SILSPKERRIIRMRFGIEGFKQTSLADIGAGFGLSKERVRQLESRALYKLKQRLGDQGLE 720
            +IL+P+ER+IIR+R+GIE  K+ SL++IG+ FGLSKERVRQLESRALYKLKQ L   GLE
Sbjct: 482  NILNPRERKIIRLRYGIEDGKKKSLSEIGSVFGLSKERVRQLESRALYKLKQCLASHGLE 541

Query: 721  DYSSLL 738
             Y+ LL
Sbjct: 542  AYADLL 547


>ref|XP_007204994.1| hypothetical protein PRUPE_ppa003513mg [Prunus persica]
            gi|462400636|gb|EMJ06193.1| hypothetical protein
            PRUPE_ppa003513mg [Prunus persica]
          Length = 568

 Score =  353 bits (907), Expect = 3e-95
 Identities = 180/246 (73%), Positives = 201/246 (81%)
 Frame = +1

Query: 1    LHSGNRCREKLICANFRMVVHIAKHYQGRGLSLQDLMQEGSLGLMKSVAKFKTQAGCRFA 180
            L SG   REKLI AN RMVVHIAK YQGRGL LQDLMQEGS+GLMKSV KFK QAGCRFA
Sbjct: 322  LRSGTSSREKLIYANLRMVVHIAKQYQGRGLGLQDLMQEGSMGLMKSVEKFKPQAGCRFA 381

Query: 181  TYAYWWIRQSVRKAVFQHSRTIRLPDNVYALLGKITEAKRSFFQEAQRRPTNEELAARVG 360
            TYAYWWIRQ+VRKA+FQHSRTIRLP+NVY+LLGK+ EAK+S  QE    P  EELA RVG
Sbjct: 382  TYAYWWIRQTVRKAIFQHSRTIRLPENVYSLLGKVLEAKKSCIQEGNHNPNKEELARRVG 441

Query: 361  VTVERLDCLLSSARTPLSMQQPVWTDQATTFQEITADTRVETPEVMVTKQLMRQHVRNLL 540
            +TVE+L+ LL + R PLSMQQPVW DQ TTFQE+TADT VE P+V V KQLMRQHVR+LL
Sbjct: 442  ITVEKLEKLLYATRMPLSMQQPVWADQDTTFQEVTADTGVEIPDVSVAKQLMRQHVRHLL 501

Query: 541  SILSPKERRIIRMRFGIEGFKQTSLADIGAGFGLSKERVRQLESRALYKLKQRLGDQGLE 720
            SIL+ +ER IIR+R+GIE  KQ SL++IG  FGLSKERVRQLESRA  KL+Q LG QGL 
Sbjct: 502  SILNLREREIIRLRYGIEDGKQRSLSEIGGMFGLSKERVRQLESRAFLKLRQSLGSQGLG 561

Query: 721  DYSSLL 738
             Y  LL
Sbjct: 562  AYGPLL 567


>ref|XP_002276710.2| PREDICTED: RNA polymerase sigma factor rpoD [Vitis vinifera]
          Length = 572

 Score =  351 bits (900), Expect = 2e-94
 Identities = 174/246 (70%), Positives = 200/246 (81%)
 Frame = +1

Query: 1    LHSGNRCREKLICANFRMVVHIAKHYQGRGLSLQDLMQEGSLGLMKSVAKFKTQAGCRFA 180
            LHSGNR R+KLI AN RMVVHIAK YQGRGL+LQDL+QEGS+GLM SV KFK  AGCRFA
Sbjct: 326  LHSGNRSRQKLIYANLRMVVHIAKQYQGRGLNLQDLLQEGSMGLMNSVEKFKPNAGCRFA 385

Query: 181  TYAYWWIRQSVRKAVFQHSRTIRLPDNVYALLGKITEAKRSFFQEAQRRPTNEELAARVG 360
            +YAYWWIRQ+VRKA+FQHSRTIRLP+N+Y+LLGK+ EAKR F QE    PT EE+A RVG
Sbjct: 386  SYAYWWIRQAVRKAIFQHSRTIRLPENMYSLLGKVKEAKRLFIQEGHHDPTKEEIAERVG 445

Query: 361  VTVERLDCLLSSARTPLSMQQPVWTDQATTFQEITADTRVETPEVMVTKQLMRQHVRNLL 540
            +T+E+L  LL   R PLSMQQPVW DQ TTFQE+TADT +E P+V V KQLMRQHVRNLL
Sbjct: 446  ITIEKLQRLLLHTRMPLSMQQPVWADQDTTFQEVTADTGIEIPDVSVAKQLMRQHVRNLL 505

Query: 541  SILSPKERRIIRMRFGIEGFKQTSLADIGAGFGLSKERVRQLESRALYKLKQRLGDQGLE 720
             +L+PKERRIIR+RFGI      +L++IG  FG SKERVRQLE RAL+KLKQ L   GLE
Sbjct: 506  HVLTPKERRIIRLRFGIGDGIPRTLSEIGLVFGFSKERVRQLEQRALHKLKQCLSSHGLE 565

Query: 721  DYSSLL 738
             Y+ LL
Sbjct: 566  SYTDLL 571


>emb|CBI32760.3| unnamed protein product [Vitis vinifera]
          Length = 561

 Score =  351 bits (900), Expect = 2e-94
 Identities = 174/246 (70%), Positives = 200/246 (81%)
 Frame = +1

Query: 1    LHSGNRCREKLICANFRMVVHIAKHYQGRGLSLQDLMQEGSLGLMKSVAKFKTQAGCRFA 180
            LHSGNR R+KLI AN RMVVHIAK YQGRGL+LQDL+QEGS+GLM SV KFK  AGCRFA
Sbjct: 315  LHSGNRSRQKLIYANLRMVVHIAKQYQGRGLNLQDLLQEGSMGLMNSVEKFKPNAGCRFA 374

Query: 181  TYAYWWIRQSVRKAVFQHSRTIRLPDNVYALLGKITEAKRSFFQEAQRRPTNEELAARVG 360
            +YAYWWIRQ+VRKA+FQHSRTIRLP+N+Y+LLGK+ EAKR F QE    PT EE+A RVG
Sbjct: 375  SYAYWWIRQAVRKAIFQHSRTIRLPENMYSLLGKVKEAKRLFIQEGHHDPTKEEIAERVG 434

Query: 361  VTVERLDCLLSSARTPLSMQQPVWTDQATTFQEITADTRVETPEVMVTKQLMRQHVRNLL 540
            +T+E+L  LL   R PLSMQQPVW DQ TTFQE+TADT +E P+V V KQLMRQHVRNLL
Sbjct: 435  ITIEKLQRLLLHTRMPLSMQQPVWADQDTTFQEVTADTGIEIPDVSVAKQLMRQHVRNLL 494

Query: 541  SILSPKERRIIRMRFGIEGFKQTSLADIGAGFGLSKERVRQLESRALYKLKQRLGDQGLE 720
             +L+PKERRIIR+RFGI      +L++IG  FG SKERVRQLE RAL+KLKQ L   GLE
Sbjct: 495  HVLTPKERRIIRLRFGIGDGIPRTLSEIGLVFGFSKERVRQLEQRALHKLKQCLSSHGLE 554

Query: 721  DYSSLL 738
             Y+ LL
Sbjct: 555  SYTDLL 560


>ref|XP_004246643.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
            [Solanum lycopersicum]
          Length = 563

 Score =  349 bits (896), Expect = 6e-94
 Identities = 175/247 (70%), Positives = 204/247 (82%)
 Frame = +1

Query: 1    LHSGNRCREKLICANFRMVVHIAKHYQGRGLSLQDLMQEGSLGLMKSVAKFKTQAGCRFA 180
            L SG   REKLI AN RMVVHIAK YQGRGL+LQDL+QEGS+GLMKSV KFK QAGCRF 
Sbjct: 317  LLSGKSSREKLINANLRMVVHIAKQYQGRGLNLQDLLQEGSMGLMKSVEKFKPQAGCRFP 376

Query: 181  TYAYWWIRQSVRKAVFQHSRTIRLPDNVYALLGKITEAKRSFFQEAQRRPTNEELAARVG 360
            TYAYWWIRQSVRKA+FQHSRTIRLP+NVYALL K+ +AKR   ++  R PT E++A+  G
Sbjct: 377  TYAYWWIRQSVRKAIFQHSRTIRLPENVYALLSKVKDAKRECIRQGNRHPTKEDIASCAG 436

Query: 361  VTVERLDCLLSSARTPLSMQQPVWTDQATTFQEITADTRVETPEVMVTKQLMRQHVRNLL 540
            ++VERL  LLS+ RTPLSMQQ VW+DQ TTFQEITAD  +E PE+ V+KQLMR+H+R LL
Sbjct: 437  MSVERLQNLLSNVRTPLSMQQSVWSDQDTTFQEITADNAIEAPELSVSKQLMRRHIRGLL 496

Query: 541  SILSPKERRIIRMRFGIEGFKQTSLADIGAGFGLSKERVRQLESRALYKLKQRLGDQGLE 720
            ++LSPKER+IIR+RFGI   K  SL++IGA FGLSKERVRQLE+RALYKLKQ L   GL+
Sbjct: 497  NVLSPKERKIIRLRFGIGDGKPKSLSEIGAVFGLSKERVRQLETRALYKLKQNLNKHGLD 556

Query: 721  DYSSLLF 741
             YS LLF
Sbjct: 557  AYSDLLF 563


>ref|XP_006354351.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
            [Solanum tuberosum]
          Length = 562

 Score =  347 bits (891), Expect = 2e-93
 Identities = 174/247 (70%), Positives = 203/247 (82%)
 Frame = +1

Query: 1    LHSGNRCREKLICANFRMVVHIAKHYQGRGLSLQDLMQEGSLGLMKSVAKFKTQAGCRFA 180
            L SG   REKLI AN RMVVHIAK YQGRGL+LQDL+QEGS+GLMKSV KFK QAGCRF 
Sbjct: 316  LLSGKSSREKLINANLRMVVHIAKQYQGRGLNLQDLLQEGSMGLMKSVEKFKPQAGCRFP 375

Query: 181  TYAYWWIRQSVRKAVFQHSRTIRLPDNVYALLGKITEAKRSFFQEAQRRPTNEELAARVG 360
            TYAYWWIRQSVRKA+FQHSRTIRLP+NVYALL K+ +AK+   Q+  R PT E++A+  G
Sbjct: 376  TYAYWWIRQSVRKAIFQHSRTIRLPENVYALLSKVKDAKKECIQQGNRYPTKEDIASCAG 435

Query: 361  VTVERLDCLLSSARTPLSMQQPVWTDQATTFQEITADTRVETPEVMVTKQLMRQHVRNLL 540
            ++VERL  LLS+ RTPLSMQQ VW+DQ TTFQEITAD  +E PE+ V+KQLMR+H+R LL
Sbjct: 436  MSVERLQNLLSNVRTPLSMQQSVWSDQDTTFQEITADNAIEAPELSVSKQLMRRHIRGLL 495

Query: 541  SILSPKERRIIRMRFGIEGFKQTSLADIGAGFGLSKERVRQLESRALYKLKQRLGDQGLE 720
            ++LSPKER+IIR+RFGI   K  SL++IG  FGLSKERVRQLE+RALYKLKQ L   GL+
Sbjct: 496  NVLSPKERKIIRLRFGIGDGKPKSLSEIGTVFGLSKERVRQLETRALYKLKQNLNKHGLD 555

Query: 721  DYSSLLF 741
             YS LLF
Sbjct: 556  AYSDLLF 562


>ref|NP_565856.1| RNA polymerase sigma factor sigF [Arabidopsis thaliana]
            gi|75173811|sp|Q9LD95.1|SIGF_ARATH RecName: Full=RNA
            polymerase sigma factor sigF, chloroplastic; Short=Sigma
            factor F; Short=Sigma-F; AltName: Full=Protein SINGLET
            OXYGEN-LINKED DEATH ACTIVATOR 8; AltName: Full=RNA
            polymerase sigma factor sig6; Short=Atsig6; Short=Sigma
            factor 6; Flags: Precursor gi|7209640|dbj|BAA92288.1|
            SigF [Arabidopsis thaliana] gi|7688083|emb|CAB89775.1|
            sigma factor-like protein [Arabidopsis thaliana]
            gi|16604647|gb|AAL24116.1| putative RNA polymerase
            sigma-70 factor [Arabidopsis thaliana]
            gi|20197948|gb|AAD31584.2| putative RNA polymerase
            sigma-70 factor [Arabidopsis thaliana]
            gi|20259557|gb|AAM14121.1| putative RNA polymerase
            sigma-70 factor protein [Arabidopsis thaliana]
            gi|330254238|gb|AEC09332.1| RNA polymerase sigma factor
            sigF [Arabidopsis thaliana]
          Length = 547

 Score =  346 bits (888), Expect = 5e-93
 Identities = 168/246 (68%), Positives = 204/246 (82%)
 Frame = +1

Query: 1    LHSGNRCREKLICANFRMVVHIAKHYQGRGLSLQDLMQEGSLGLMKSVAKFKTQAGCRFA 180
            +H G   REKLI AN R+VVHIAK YQ RGL+ QDL+QEGS+GLMKSV KFK Q+GCRFA
Sbjct: 301  IHRGRSSREKLITANLRLVVHIAKQYQNRGLNFQDLLQEGSMGLMKSVEKFKPQSGCRFA 360

Query: 181  TYAYWWIRQSVRKAVFQHSRTIRLPDNVYALLGKITEAKRSFFQEAQRRPTNEELAARVG 360
            TYAYWWIRQS+RK++FQ+SRTIRLP+NVY LLGK++EA+++  QE   RP+ EELA  VG
Sbjct: 361  TYAYWWIRQSIRKSIFQNSRTIRLPENVYMLLGKVSEARKTCVQEGNYRPSKEELAGHVG 420

Query: 361  VTVERLDCLLSSARTPLSMQQPVWTDQATTFQEITADTRVETPEVMVTKQLMRQHVRNLL 540
            V+ E+LD LL + RTPLSMQQP+W+DQ TTFQEIT D+ +ETP + V KQLMR HVRNLL
Sbjct: 421  VSTEKLDKLLYNTRTPLSMQQPIWSDQDTTFQEITPDSGIETPTMSVGKQLMRNHVRNLL 480

Query: 541  SILSPKERRIIRMRFGIEGFKQTSLADIGAGFGLSKERVRQLESRALYKLKQRLGDQGLE 720
            ++LSPKERRII++RFGI+G KQ SL++IG  +GLSKERVRQLESRALY+LKQ +   GL 
Sbjct: 481  NVLSPKERRIIKLRFGIDGGKQRSLSEIGEIYGLSKERVRQLESRALYRLKQNMNSHGLH 540

Query: 721  DYSSLL 738
             Y+ LL
Sbjct: 541  AYADLL 546


>emb|CAB60192.1| putative sigma-like transcription factor [Arabidopsis thaliana]
          Length = 487

 Score =  346 bits (888), Expect = 5e-93
 Identities = 168/246 (68%), Positives = 204/246 (82%)
 Frame = +1

Query: 1   LHSGNRCREKLICANFRMVVHIAKHYQGRGLSLQDLMQEGSLGLMKSVAKFKTQAGCRFA 180
           +H G   REKLI AN R+VVHIAK YQ RGL+ QDL+QEGS+GLMKSV KFK Q+GCRFA
Sbjct: 241 IHRGRSSREKLITANLRLVVHIAKQYQNRGLNFQDLLQEGSMGLMKSVEKFKPQSGCRFA 300

Query: 181 TYAYWWIRQSVRKAVFQHSRTIRLPDNVYALLGKITEAKRSFFQEAQRRPTNEELAARVG 360
           TYAYWWIRQS+RK++FQ+SRTIRLP+NVY LLGK++EA+++  QE   RP+ EELA  VG
Sbjct: 301 TYAYWWIRQSIRKSIFQNSRTIRLPENVYMLLGKVSEARKTCVQEGNYRPSKEELAGHVG 360

Query: 361 VTVERLDCLLSSARTPLSMQQPVWTDQATTFQEITADTRVETPEVMVTKQLMRQHVRNLL 540
           V+ E+LD LL + RTPLSMQQP+W+DQ TTFQEIT D+ +ETP + V KQLMR HVRNLL
Sbjct: 361 VSTEKLDKLLYNTRTPLSMQQPIWSDQDTTFQEITPDSGIETPTMSVGKQLMRNHVRNLL 420

Query: 541 SILSPKERRIIRMRFGIEGFKQTSLADIGAGFGLSKERVRQLESRALYKLKQRLGDQGLE 720
           ++LSPKERRII++RFGI+G KQ SL++IG  +GLSKERVRQLESRALY+LKQ +   GL 
Sbjct: 421 NVLSPKERRIIKLRFGIDGGKQRSLSEIGEIYGLSKERVRQLESRALYRLKQNMNSHGLH 480

Query: 721 DYSSLL 738
            Y+ LL
Sbjct: 481 AYADLL 486


>ref|XP_006604578.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
            [Glycine max]
          Length = 554

 Score =  344 bits (883), Expect = 2e-92
 Identities = 169/246 (68%), Positives = 201/246 (81%)
 Frame = +1

Query: 1    LHSGNRCREKLICANFRMVVHIAKHYQGRGLSLQDLMQEGSLGLMKSVAKFKTQAGCRFA 180
            LH  NR +EKL  AN RMVVHIAKHYQGRGLSLQDL QEGS GLMKS+ KFK +AGCRF 
Sbjct: 308  LHCANRSKEKLFHANLRMVVHIAKHYQGRGLSLQDLFQEGSTGLMKSIEKFKPEAGCRFG 367

Query: 181  TYAYWWIRQSVRKAVFQHSRTIRLPDNVYALLGKITEAKRSFFQEAQRRPTNEELAARVG 360
            TYAYWWIR +VRKA+F HSRTIRLP+N+Y LLGK+ EAK+S+ QE    PT EELA +VG
Sbjct: 368  TYAYWWIRHAVRKAIFLHSRTIRLPENLYTLLGKVIEAKKSYIQEGNLHPTKEELARKVG 427

Query: 361  VTVERLDCLLSSARTPLSMQQPVWTDQATTFQEITADTRVETPEVMVTKQLMRQHVRNLL 540
            +T+E++D LL ++R P+SMQQ VW DQ TTFQEITAD+ +E P+V V+KQLMR HV NLL
Sbjct: 428  ITIEKMDNLLFASRNPISMQQTVWADQDTTFQEITADSAIEIPDVTVSKQLMRMHVHNLL 487

Query: 541  SILSPKERRIIRMRFGIEGFKQTSLADIGAGFGLSKERVRQLESRALYKLKQRLGDQGLE 720
            +ILSPKER IIR+RFGIE  ++ +L+DIG  FGL+KERVRQLESRAL KL+Q L  QGL+
Sbjct: 488  NILSPKERGIIRLRFGIEDGEEKTLSDIGKVFGLTKERVRQLESRALLKLRQCLESQGLD 547

Query: 721  DYSSLL 738
             Y+ LL
Sbjct: 548  AYTDLL 553


>ref|XP_002881484.1| RNA polymerase sigma-70 factor [Arabidopsis lyrata subsp. lyrata]
            gi|297327323|gb|EFH57743.1| RNA polymerase sigma-70
            factor [Arabidopsis lyrata subsp. lyrata]
          Length = 546

 Score =  344 bits (883), Expect = 2e-92
 Identities = 166/246 (67%), Positives = 204/246 (82%)
 Frame = +1

Query: 1    LHSGNRCREKLICANFRMVVHIAKHYQGRGLSLQDLMQEGSLGLMKSVAKFKTQAGCRFA 180
            +H G   REKLI AN R+VVHIAK YQ RGL+ QDL+QEGS+GLMKSV KFK Q+GCRFA
Sbjct: 300  IHRGRSSREKLITANLRLVVHIAKQYQNRGLNFQDLLQEGSMGLMKSVEKFKPQSGCRFA 359

Query: 181  TYAYWWIRQSVRKAVFQHSRTIRLPDNVYALLGKITEAKRSFFQEAQRRPTNEELAARVG 360
            TYAYWWIRQS+RK++FQ+SRTIRLP+NVY LLGK++EA+++  QE   RP+ E+LA  VG
Sbjct: 360  TYAYWWIRQSIRKSIFQNSRTIRLPENVYMLLGKVSEARKTCVQEGNYRPSKEQLAGHVG 419

Query: 361  VTVERLDCLLSSARTPLSMQQPVWTDQATTFQEITADTRVETPEVMVTKQLMRQHVRNLL 540
            V+ E+LD LL + RTPLSMQQP+W+DQ TTFQEIT D+ +ETP + V KQ+MR HVRNLL
Sbjct: 420  VSTEKLDKLLYNTRTPLSMQQPIWSDQDTTFQEITPDSGIETPTMSVGKQMMRNHVRNLL 479

Query: 541  SILSPKERRIIRMRFGIEGFKQTSLADIGAGFGLSKERVRQLESRALYKLKQRLGDQGLE 720
            ++LSPKERRII++RFGI+G KQ SL++IG  +GLSKERVRQLESRALY+LKQ +   GL 
Sbjct: 480  NVLSPKERRIIKLRFGIDGGKQRSLSEIGEIYGLSKERVRQLESRALYRLKQHMNSHGLH 539

Query: 721  DYSSLL 738
             Y+ LL
Sbjct: 540  AYADLL 545


>ref|XP_006410875.1| hypothetical protein EUTSA_v10016472mg [Eutrema salsugineum]
            gi|557112044|gb|ESQ52328.1| hypothetical protein
            EUTSA_v10016472mg [Eutrema salsugineum]
          Length = 546

 Score =  343 bits (881), Expect = 3e-92
 Identities = 164/246 (66%), Positives = 205/246 (83%)
 Frame = +1

Query: 1    LHSGNRCREKLICANFRMVVHIAKHYQGRGLSLQDLMQEGSLGLMKSVAKFKTQAGCRFA 180
            +H G   REKLI AN R+VVHIAK YQ RGL+ QDL+QEGS+GLMKSV KFK Q+GCRFA
Sbjct: 300  IHRGRSSREKLITANLRLVVHIAKQYQNRGLNFQDLLQEGSMGLMKSVEKFKPQSGCRFA 359

Query: 181  TYAYWWIRQSVRKAVFQHSRTIRLPDNVYALLGKITEAKRSFFQEAQRRPTNEELAARVG 360
            TYAYWWIRQS+RK++FQ+SRTIRLP+NVY LLGK++EA+++  Q+   RP+ E+LA+ VG
Sbjct: 360  TYAYWWIRQSIRKSIFQNSRTIRLPENVYMLLGKVSEARKTCIQDGNYRPSKEQLASHVG 419

Query: 361  VTVERLDCLLSSARTPLSMQQPVWTDQATTFQEITADTRVETPEVMVTKQLMRQHVRNLL 540
            V+ E+LD LL + RTPLSMQQP+W+DQ TTFQE+T D+ +ETP + V KQLMR HVRNLL
Sbjct: 420  VSTEKLDKLLYNTRTPLSMQQPIWSDQDTTFQEVTPDSGIETPSMSVGKQLMRNHVRNLL 479

Query: 541  SILSPKERRIIRMRFGIEGFKQTSLADIGAGFGLSKERVRQLESRALYKLKQRLGDQGLE 720
            ++LSPKE+RII++RFGI+G KQ SL++IG  +GLSKERVRQLESRALY+LKQ +   GL 
Sbjct: 480  NVLSPKEKRIIKLRFGIDGGKQRSLSEIGEIYGLSKERVRQLESRALYRLKQNMSSHGLN 539

Query: 721  DYSSLL 738
             Y+ LL
Sbjct: 540  AYADLL 545


>ref|XP_006410876.1| hypothetical protein EUTSA_v10016472mg [Eutrema salsugineum]
            gi|312282671|dbj|BAJ34201.1| unnamed protein product
            [Thellungiella halophila] gi|557112045|gb|ESQ52329.1|
            hypothetical protein EUTSA_v10016472mg [Eutrema
            salsugineum]
          Length = 547

 Score =  343 bits (881), Expect = 3e-92
 Identities = 164/246 (66%), Positives = 205/246 (83%)
 Frame = +1

Query: 1    LHSGNRCREKLICANFRMVVHIAKHYQGRGLSLQDLMQEGSLGLMKSVAKFKTQAGCRFA 180
            +H G   REKLI AN R+VVHIAK YQ RGL+ QDL+QEGS+GLMKSV KFK Q+GCRFA
Sbjct: 301  IHRGRSSREKLITANLRLVVHIAKQYQNRGLNFQDLLQEGSMGLMKSVEKFKPQSGCRFA 360

Query: 181  TYAYWWIRQSVRKAVFQHSRTIRLPDNVYALLGKITEAKRSFFQEAQRRPTNEELAARVG 360
            TYAYWWIRQS+RK++FQ+SRTIRLP+NVY LLGK++EA+++  Q+   RP+ E+LA+ VG
Sbjct: 361  TYAYWWIRQSIRKSIFQNSRTIRLPENVYMLLGKVSEARKTCIQDGNYRPSKEQLASHVG 420

Query: 361  VTVERLDCLLSSARTPLSMQQPVWTDQATTFQEITADTRVETPEVMVTKQLMRQHVRNLL 540
            V+ E+LD LL + RTPLSMQQP+W+DQ TTFQE+T D+ +ETP + V KQLMR HVRNLL
Sbjct: 421  VSTEKLDKLLYNTRTPLSMQQPIWSDQDTTFQEVTPDSGIETPSMSVGKQLMRNHVRNLL 480

Query: 541  SILSPKERRIIRMRFGIEGFKQTSLADIGAGFGLSKERVRQLESRALYKLKQRLGDQGLE 720
            ++LSPKE+RII++RFGI+G KQ SL++IG  +GLSKERVRQLESRALY+LKQ +   GL 
Sbjct: 481  NVLSPKEKRIIKLRFGIDGGKQRSLSEIGEIYGLSKERVRQLESRALYRLKQNMSSHGLN 540

Query: 721  DYSSLL 738
             Y+ LL
Sbjct: 541  AYADLL 546


>ref|XP_006493036.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
            isoform X3 [Citrus sinensis]
          Length = 561

 Score =  343 bits (880), Expect = 4e-92
 Identities = 167/246 (67%), Positives = 200/246 (81%)
 Frame = +1

Query: 1    LHSGNRCREKLICANFRMVVHIAKHYQGRGLSLQDLMQEGSLGLMKSVAKFKTQAGCRFA 180
            LHSGN  REKLI AN R+VVH+AK YQGRG+ L DL+QEGS+GLMKSV KFK QAGCRFA
Sbjct: 315  LHSGNSSREKLINANLRLVVHVAKQYQGRGIGLHDLLQEGSMGLMKSVEKFKPQAGCRFA 374

Query: 181  TYAYWWIRQSVRKAVFQHSRTIRLPDNVYALLGKITEAKRSFFQEAQRRPTNEELAARVG 360
            +YAYWW+RQ++RKA+FQHSRTIRLP+N+Y LL ++ EAKR + QE    P  E+LA RVG
Sbjct: 375  SYAYWWVRQTIRKAIFQHSRTIRLPENIYTLLSRVLEAKRLYIQEGNHSPDKEDLARRVG 434

Query: 361  VTVERLDCLLSSARTPLSMQQPVWTDQATTFQEITADTRVETPEVMVTKQLMRQHVRNLL 540
            +TVE+L+ L+   R PLSMQQPVW DQ TTFQEITADT VE P++ V KQLMRQHVRNLL
Sbjct: 435  ITVEKLERLIFITRMPLSMQQPVWADQDTTFQEITADTGVEIPDISVQKQLMRQHVRNLL 494

Query: 541  SILSPKERRIIRMRFGIEGFKQTSLADIGAGFGLSKERVRQLESRALYKLKQRLGDQGLE 720
            ++L+PKER I+R+RFGIE  K  SL+++G  FGLSKERVRQLESRALY+LKQ LG +   
Sbjct: 495  TLLNPKERCIVRLRFGIEDGKPKSLSEVGNIFGLSKERVRQLESRALYRLKQSLGGKASY 554

Query: 721  DYSSLL 738
             Y+ LL
Sbjct: 555  GYADLL 560


>ref|XP_006493035.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
            isoform X2 [Citrus sinensis]
          Length = 569

 Score =  343 bits (880), Expect = 4e-92
 Identities = 167/246 (67%), Positives = 200/246 (81%)
 Frame = +1

Query: 1    LHSGNRCREKLICANFRMVVHIAKHYQGRGLSLQDLMQEGSLGLMKSVAKFKTQAGCRFA 180
            LHSGN  REKLI AN R+VVH+AK YQGRG+ L DL+QEGS+GLMKSV KFK QAGCRFA
Sbjct: 323  LHSGNSSREKLINANLRLVVHVAKQYQGRGIGLHDLLQEGSMGLMKSVEKFKPQAGCRFA 382

Query: 181  TYAYWWIRQSVRKAVFQHSRTIRLPDNVYALLGKITEAKRSFFQEAQRRPTNEELAARVG 360
            +YAYWW+RQ++RKA+FQHSRTIRLP+N+Y LL ++ EAKR + QE    P  E+LA RVG
Sbjct: 383  SYAYWWVRQTIRKAIFQHSRTIRLPENIYTLLSRVLEAKRLYIQEGNHSPDKEDLARRVG 442

Query: 361  VTVERLDCLLSSARTPLSMQQPVWTDQATTFQEITADTRVETPEVMVTKQLMRQHVRNLL 540
            +TVE+L+ L+   R PLSMQQPVW DQ TTFQEITADT VE P++ V KQLMRQHVRNLL
Sbjct: 443  ITVEKLERLIFITRMPLSMQQPVWADQDTTFQEITADTGVEIPDISVQKQLMRQHVRNLL 502

Query: 541  SILSPKERRIIRMRFGIEGFKQTSLADIGAGFGLSKERVRQLESRALYKLKQRLGDQGLE 720
            ++L+PKER I+R+RFGIE  K  SL+++G  FGLSKERVRQLESRALY+LKQ LG +   
Sbjct: 503  TLLNPKERCIVRLRFGIEDGKPKSLSEVGNIFGLSKERVRQLESRALYRLKQSLGGKASY 562

Query: 721  DYSSLL 738
             Y+ LL
Sbjct: 563  GYADLL 568


>ref|XP_006493034.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
            isoform X1 [Citrus sinensis]
          Length = 570

 Score =  343 bits (880), Expect = 4e-92
 Identities = 167/246 (67%), Positives = 200/246 (81%)
 Frame = +1

Query: 1    LHSGNRCREKLICANFRMVVHIAKHYQGRGLSLQDLMQEGSLGLMKSVAKFKTQAGCRFA 180
            LHSGN  REKLI AN R+VVH+AK YQGRG+ L DL+QEGS+GLMKSV KFK QAGCRFA
Sbjct: 324  LHSGNSSREKLINANLRLVVHVAKQYQGRGIGLHDLLQEGSMGLMKSVEKFKPQAGCRFA 383

Query: 181  TYAYWWIRQSVRKAVFQHSRTIRLPDNVYALLGKITEAKRSFFQEAQRRPTNEELAARVG 360
            +YAYWW+RQ++RKA+FQHSRTIRLP+N+Y LL ++ EAKR + QE    P  E+LA RVG
Sbjct: 384  SYAYWWVRQTIRKAIFQHSRTIRLPENIYTLLSRVLEAKRLYIQEGNHSPDKEDLARRVG 443

Query: 361  VTVERLDCLLSSARTPLSMQQPVWTDQATTFQEITADTRVETPEVMVTKQLMRQHVRNLL 540
            +TVE+L+ L+   R PLSMQQPVW DQ TTFQEITADT VE P++ V KQLMRQHVRNLL
Sbjct: 444  ITVEKLERLIFITRMPLSMQQPVWADQDTTFQEITADTGVEIPDISVQKQLMRQHVRNLL 503

Query: 541  SILSPKERRIIRMRFGIEGFKQTSLADIGAGFGLSKERVRQLESRALYKLKQRLGDQGLE 720
            ++L+PKER I+R+RFGIE  K  SL+++G  FGLSKERVRQLESRALY+LKQ LG +   
Sbjct: 504  TLLNPKERCIVRLRFGIEDGKPKSLSEVGNIFGLSKERVRQLESRALYRLKQSLGGKASY 563

Query: 721  DYSSLL 738
             Y+ LL
Sbjct: 564  GYADLL 569


>ref|XP_006428732.1| hypothetical protein CICLE_v10011376mg [Citrus clementina]
            gi|557530789|gb|ESR41972.1| hypothetical protein
            CICLE_v10011376mg [Citrus clementina]
          Length = 561

 Score =  343 bits (880), Expect = 4e-92
 Identities = 167/246 (67%), Positives = 200/246 (81%)
 Frame = +1

Query: 1    LHSGNRCREKLICANFRMVVHIAKHYQGRGLSLQDLMQEGSLGLMKSVAKFKTQAGCRFA 180
            LHSGN  REKLI AN R+VVH+AK YQGRG+ L DL+QEGS+GLMKSV KFK QAGCRFA
Sbjct: 315  LHSGNSSREKLINANLRLVVHVAKQYQGRGIGLHDLLQEGSMGLMKSVEKFKPQAGCRFA 374

Query: 181  TYAYWWIRQSVRKAVFQHSRTIRLPDNVYALLGKITEAKRSFFQEAQRRPTNEELAARVG 360
            +YAYWW+RQ++RKA+FQHSRTIRLP+N+Y LL ++ EAKR + QE    P  E+LA RVG
Sbjct: 375  SYAYWWVRQTIRKAIFQHSRTIRLPENIYTLLSRVLEAKRLYIQEGNHSPDKEDLARRVG 434

Query: 361  VTVERLDCLLSSARTPLSMQQPVWTDQATTFQEITADTRVETPEVMVTKQLMRQHVRNLL 540
            +TVE+L+ L+   R PLSMQQPVW DQ TTFQEITADT VE P++ V KQLMRQHVRNLL
Sbjct: 435  ITVEKLERLIFITRMPLSMQQPVWADQDTTFQEITADTGVEIPDISVQKQLMRQHVRNLL 494

Query: 541  SILSPKERRIIRMRFGIEGFKQTSLADIGAGFGLSKERVRQLESRALYKLKQRLGDQGLE 720
            ++L+PKER I+R+RFGIE  K  SL+++G  FGLSKERVRQLESRALY+LKQ LG +   
Sbjct: 495  TLLNPKERCIVRLRFGIEDGKPKSLSEVGNIFGLSKERVRQLESRALYRLKQSLGGKASY 554

Query: 721  DYSSLL 738
             Y+ LL
Sbjct: 555  GYADLL 560


>ref|XP_006428731.1| hypothetical protein CICLE_v10011376mg [Citrus clementina]
            gi|557530788|gb|ESR41971.1| hypothetical protein
            CICLE_v10011376mg [Citrus clementina]
          Length = 569

 Score =  343 bits (880), Expect = 4e-92
 Identities = 167/246 (67%), Positives = 200/246 (81%)
 Frame = +1

Query: 1    LHSGNRCREKLICANFRMVVHIAKHYQGRGLSLQDLMQEGSLGLMKSVAKFKTQAGCRFA 180
            LHSGN  REKLI AN R+VVH+AK YQGRG+ L DL+QEGS+GLMKSV KFK QAGCRFA
Sbjct: 323  LHSGNSSREKLINANLRLVVHVAKQYQGRGIGLHDLLQEGSMGLMKSVEKFKPQAGCRFA 382

Query: 181  TYAYWWIRQSVRKAVFQHSRTIRLPDNVYALLGKITEAKRSFFQEAQRRPTNEELAARVG 360
            +YAYWW+RQ++RKA+FQHSRTIRLP+N+Y LL ++ EAKR + QE    P  E+LA RVG
Sbjct: 383  SYAYWWVRQTIRKAIFQHSRTIRLPENIYTLLSRVLEAKRLYIQEGNHSPDKEDLARRVG 442

Query: 361  VTVERLDCLLSSARTPLSMQQPVWTDQATTFQEITADTRVETPEVMVTKQLMRQHVRNLL 540
            +TVE+L+ L+   R PLSMQQPVW DQ TTFQEITADT VE P++ V KQLMRQHVRNLL
Sbjct: 443  ITVEKLERLIFITRMPLSMQQPVWADQDTTFQEITADTGVEIPDISVQKQLMRQHVRNLL 502

Query: 541  SILSPKERRIIRMRFGIEGFKQTSLADIGAGFGLSKERVRQLESRALYKLKQRLGDQGLE 720
            ++L+PKER I+R+RFGIE  K  SL+++G  FGLSKERVRQLESRALY+LKQ LG +   
Sbjct: 503  TLLNPKERCIVRLRFGIEDGKPKSLSEVGNIFGLSKERVRQLESRALYRLKQSLGGKASY 562

Query: 721  DYSSLL 738
             Y+ LL
Sbjct: 563  GYADLL 568


>ref|XP_006428730.1| hypothetical protein CICLE_v10011376mg [Citrus clementina]
            gi|557530787|gb|ESR41970.1| hypothetical protein
            CICLE_v10011376mg [Citrus clementina]
          Length = 558

 Score =  343 bits (880), Expect = 4e-92
 Identities = 167/246 (67%), Positives = 200/246 (81%)
 Frame = +1

Query: 1    LHSGNRCREKLICANFRMVVHIAKHYQGRGLSLQDLMQEGSLGLMKSVAKFKTQAGCRFA 180
            LHSGN  REKLI AN R+VVH+AK YQGRG+ L DL+QEGS+GLMKSV KFK QAGCRFA
Sbjct: 312  LHSGNSSREKLINANLRLVVHVAKQYQGRGIGLHDLLQEGSMGLMKSVEKFKPQAGCRFA 371

Query: 181  TYAYWWIRQSVRKAVFQHSRTIRLPDNVYALLGKITEAKRSFFQEAQRRPTNEELAARVG 360
            +YAYWW+RQ++RKA+FQHSRTIRLP+N+Y LL ++ EAKR + QE    P  E+LA RVG
Sbjct: 372  SYAYWWVRQTIRKAIFQHSRTIRLPENIYTLLSRVLEAKRLYIQEGNHSPDKEDLARRVG 431

Query: 361  VTVERLDCLLSSARTPLSMQQPVWTDQATTFQEITADTRVETPEVMVTKQLMRQHVRNLL 540
            +TVE+L+ L+   R PLSMQQPVW DQ TTFQEITADT VE P++ V KQLMRQHVRNLL
Sbjct: 432  ITVEKLERLIFITRMPLSMQQPVWADQDTTFQEITADTGVEIPDISVQKQLMRQHVRNLL 491

Query: 541  SILSPKERRIIRMRFGIEGFKQTSLADIGAGFGLSKERVRQLESRALYKLKQRLGDQGLE 720
            ++L+PKER I+R+RFGIE  K  SL+++G  FGLSKERVRQLESRALY+LKQ LG +   
Sbjct: 492  TLLNPKERCIVRLRFGIEDGKPKSLSEVGNIFGLSKERVRQLESRALYRLKQSLGGKASY 551

Query: 721  DYSSLL 738
             Y+ LL
Sbjct: 552  GYADLL 557


>ref|XP_006577030.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
           isoform X2 [Glycine max]
          Length = 477

 Score =  342 bits (876), Expect = 1e-91
 Identities = 170/246 (69%), Positives = 199/246 (80%)
 Frame = +1

Query: 1   LHSGNRCREKLICANFRMVVHIAKHYQGRGLSLQDLMQEGSLGLMKSVAKFKTQAGCRFA 180
           LH  NR +EKL  AN RMVVHIAKHYQGRGLSLQDL QEGS GLMKS+ KFK +AGCRF 
Sbjct: 231 LHCANRSKEKLFHANLRMVVHIAKHYQGRGLSLQDLFQEGSTGLMKSIQKFKPEAGCRFG 290

Query: 181 TYAYWWIRQSVRKAVFQHSRTIRLPDNVYALLGKITEAKRSFFQEAQRRPTNEELAARVG 360
           TYAYWWIR ++RKA+F HSRTIRLP+N+Y LLGK+ EAK+S+ QE    PT EELA RVG
Sbjct: 291 TYAYWWIRHAIRKAIFLHSRTIRLPENLYTLLGKLIEAKKSYIQEGNLHPTKEELARRVG 350

Query: 361 VTVERLDCLLSSARTPLSMQQPVWTDQATTFQEITADTRVETPEVMVTKQLMRQHVRNLL 540
           +TVE+LD LL ++R P+SMQQ +W DQ TTFQEITAD+ +E P V V+KQLMR+HV NLL
Sbjct: 351 ITVEKLDNLLFASRNPISMQQTLWVDQDTTFQEITADSAIEIPGVTVSKQLMRRHVHNLL 410

Query: 541 SILSPKERRIIRMRFGIEGFKQTSLADIGAGFGLSKERVRQLESRALYKLKQRLGDQGLE 720
           +ILSPKE+ IIR+RFGIE  K+ +L+DIG  FGL+KERVRQLE RAL KLKQ L  QGL+
Sbjct: 411 NILSPKEKGIIRLRFGIEDGKEKTLSDIGKVFGLTKERVRQLECRALSKLKQCLESQGLD 470

Query: 721 DYSSLL 738
            Y  LL
Sbjct: 471 AYIDLL 476