BLASTX nr result

ID: Paeonia25_contig00034879 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia25_contig00034879
         (432 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vu...    66   6e-09
gb|AAR13295.1| retrovirus-related pol polyprotein [Phaseolus vul...    65   1e-08

>gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vulgaris]
          Length = 867

 Score = 65.9 bits (159), Expect = 6e-09
 Identities = 35/94 (37%), Positives = 48/94 (51%), Gaps = 2/94 (2%)
 Frame = +1

Query: 16  FDHLVTTLLHGKETITLDEVSNSLLKP*F--QEWKSSSSQKKNEAMMTRGKAEXXXXXXX 189
           F+HL TTLLHGKE ++LD V ++L       Q+   + S    EA++ RG+ +       
Sbjct: 97  FEHLETTLLHGKENVSLDVVCSALYSHELRKQDKMKTKSTTSEEALVARGRQQSQTKERR 156

Query: 190 XXXXXXXXXXXXXWINKDECRYCHEKGHWAIDCP 291
                         + KDEC +CHEKGHW  DCP
Sbjct: 157 GMSKSKGRA-----VAKDECAFCHEKGHWKKDCP 185


>gb|AAR13295.1| retrovirus-related pol polyprotein [Phaseolus vulgaris]
          Length = 324

 Score = 65.1 bits (157), Expect = 1e-08
 Identities = 35/94 (37%), Positives = 48/94 (51%), Gaps = 2/94 (2%)
 Frame = +1

Query: 16  FDHLVTTLLHGKETITLDEVSNSLLKP*F--QEWKSSSSQKKNEAMMTRGKAEXXXXXXX 189
           F+HL TTLLHGK+ ++LD V ++L       Q+   + S    EA++TRG  +       
Sbjct: 136 FEHLETTLLHGKDNVSLDVVCSALYSHELRKQDKMKTKSTTSEEALVTRGGQQSQTKERR 195

Query: 190 XXXXXXXXXXXXXWINKDECRYCHEKGHWAIDCP 291
                         + KDEC +CHEKGHW  DCP
Sbjct: 196 GMCKSKGRV-----VAKDECAFCHEKGHWKKDCP 224


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