BLASTX nr result
ID: Paeonia25_contig00034679
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Paeonia25_contig00034679
(237 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004491901.1| PREDICTED: DNA-directed RNA polymerase III s... 68 2e-09
ref|XP_003621614.1| DNA-directed RNA polymerase III subunit RPC6... 67 2e-09
ref|XP_003533851.1| PREDICTED: probable DNA-directed RNA polymer... 67 3e-09
ref|XP_003625992.1| DNA-directed RNA polymerase III subunit rpc6... 66 6e-09
ref|XP_004245997.1| PREDICTED: DNA-directed RNA polymerase III s... 65 8e-09
ref|XP_006366884.1| PREDICTED: DNA-directed RNA polymerase III s... 65 1e-08
ref|XP_007139345.1| hypothetical protein PHAVU_008G021700g [Phas... 64 3e-08
ref|XP_003529842.1| PREDICTED: DNA-directed RNA polymerase III s... 64 3e-08
ref|XP_002509507.1| DNA-directed RNA polymerase III subunit F, p... 63 4e-08
ref|XP_007135413.1| hypothetical protein PHAVU_010G127200g [Phas... 63 5e-08
gb|AFK40562.1| unknown [Lotus japonicus] 63 5e-08
ref|XP_002297621.2| hypothetical protein POPTR_0001s04090g [Popu... 62 8e-08
dbj|BAJ53222.1| JHL06P13.1 [Jatropha curcas] 61 1e-07
emb|CBI33284.3| unnamed protein product [Vitis vinifera] 61 1e-07
ref|XP_003635557.1| PREDICTED: DNA-directed RNA polymerase III s... 61 1e-07
ref|XP_004977282.1| PREDICTED: DNA-directed RNA polymerase III s... 61 2e-07
ref|XP_004148278.1| PREDICTED: DNA-directed RNA polymerase III s... 61 2e-07
ref|XP_002324707.1| hypothetical protein POPTR_0018s04220g [Popu... 61 2e-07
ref|XP_007023168.1| DNA-directed RNA polymerase III subunit rpc6... 60 2e-07
emb|CBI36309.3| unnamed protein product [Vitis vinifera] 60 2e-07
>ref|XP_004491901.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
isoform X1 [Cicer arietinum]
gi|502101892|ref|XP_004491902.1| PREDICTED: DNA-directed
RNA polymerase III subunit RPC6-like isoform X2 [Cicer
arietinum]
Length = 235
Score = 67.8 bits (164), Expect = 2e-09
Identities = 35/64 (54%), Positives = 45/64 (70%), Gaps = 3/64 (4%)
Frame = -3
Query: 208 TLLNK--RKRLDKGMIKKFSNI-NKTLKTYIATGFEPSDELTGGDWYADGKLDTEFIDAL 38
T+ NK ++ + K MIK+ + I NK K Y+A FEPS E+TGG+WY DGKLDT+FI AL
Sbjct: 53 TVFNKTLKELMSKSMIKEVTTIQNKGRKHYMAIEFEPSKEITGGNWYTDGKLDTDFIAAL 112
Query: 37 KRTC 26
K C
Sbjct: 113 KDVC 116
>ref|XP_003621614.1| DNA-directed RNA polymerase III subunit RPC6 [Medicago truncatula]
gi|355496629|gb|AES77832.1| DNA-directed RNA polymerase
III subunit RPC6 [Medicago truncatula]
Length = 456
Score = 67.4 bits (163), Expect = 2e-09
Identities = 34/66 (51%), Positives = 48/66 (72%), Gaps = 3/66 (4%)
Frame = -3
Query: 202 LNKRKR--LDKGMIKKFSNI-NKTLKTYIATGFEPSDELTGGDWYADGKLDTEFIDALKR 32
LNK + ++K M+K+ +I NK +K Y+ T FEPS ++TGG +Y++G LDT FIDALK+
Sbjct: 57 LNKHMKALMNKSMVKELPSIKNKGIKIYMGTEFEPSKDITGGHFYSEGSLDTVFIDALKQ 116
Query: 31 TCLMGI 14
TCL I
Sbjct: 117 TCLQCI 122
>ref|XP_003533851.1| PREDICTED: probable DNA-directed RNA polymerase III subunit
RPC6-like [Glycine max]
Length = 237
Score = 66.6 bits (161), Expect = 3e-09
Identities = 31/59 (52%), Positives = 41/59 (69%), Gaps = 1/59 (1%)
Frame = -3
Query: 184 LDKGMIKKFSNI-NKTLKTYIATGFEPSDELTGGDWYADGKLDTEFIDALKRTCLMGIK 11
+ K +IK+ N+ NK+ K +AT FEPS E++GG+WY DGK DTEFI AL CL I+
Sbjct: 67 ITKNLIKEVVNVHNKSKKLLMATDFEPSKEISGGEWYTDGKFDTEFIGALSDACLSNIR 125
>ref|XP_003625992.1| DNA-directed RNA polymerase III subunit rpc6 [Medicago truncatula]
gi|355501007|gb|AES82210.1| DNA-directed RNA polymerase
III subunit rpc6 [Medicago truncatula]
Length = 338
Score = 65.9 bits (159), Expect = 6e-09
Identities = 37/78 (47%), Positives = 56/78 (71%), Gaps = 7/78 (8%)
Frame = -3
Query: 235 EIEMSRA---QSTLLNKRKR--LDK-GMIKKFSNI-NKTLKTYIATGFEPSDELTGGDWY 77
+I+M+R +T+LNK + ++K M+K+ NI N+ +K Y+A EPS+++TGG +Y
Sbjct: 50 QIDMNREINLPTTVLNKSLKALVEKYSMVKEVPNIQNEDIKHYMAAELEPSEDITGGHFY 109
Query: 76 ADGKLDTEFIDALKRTCL 23
+DGKLDT FIDALK+ CL
Sbjct: 110 SDGKLDTGFIDALKKVCL 127
>ref|XP_004245997.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc6-like
isoform 1 [Solanum lycopersicum]
gi|460400960|ref|XP_004245998.1| PREDICTED: DNA-directed
RNA polymerase III subunit rpc6-like isoform 2 [Solanum
lycopersicum]
Length = 237
Score = 65.5 bits (158), Expect = 8e-09
Identities = 31/53 (58%), Positives = 39/53 (73%), Gaps = 1/53 (1%)
Frame = -3
Query: 178 KGMIKKFSNI-NKTLKTYIATGFEPSDELTGGDWYADGKLDTEFIDALKRTCL 23
K +IKK +I NK K Y+A +EPS+ELTGG WY++GKLD EFI L+ TCL
Sbjct: 67 KNLIKKVPSIQNKAKKYYMAVEYEPSEELTGGAWYSEGKLDKEFITVLRETCL 119
>ref|XP_006366884.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc6-like
[Solanum tuberosum]
Length = 237
Score = 65.1 bits (157), Expect = 1e-08
Identities = 31/53 (58%), Positives = 38/53 (71%), Gaps = 1/53 (1%)
Frame = -3
Query: 178 KGMIKKFSNI-NKTLKTYIATGFEPSDELTGGDWYADGKLDTEFIDALKRTCL 23
K +IKK I NK K Y+A +EPS+ELTGG WY++GKLD EFI L+ TCL
Sbjct: 67 KNLIKKVPTIQNKAKKHYMAVEYEPSEELTGGAWYSEGKLDKEFITVLRETCL 119
>ref|XP_007139345.1| hypothetical protein PHAVU_008G021700g [Phaseolus vulgaris]
gi|561012478|gb|ESW11339.1| hypothetical protein
PHAVU_008G021700g [Phaseolus vulgaris]
Length = 239
Score = 63.5 bits (153), Expect = 3e-08
Identities = 30/53 (56%), Positives = 37/53 (69%), Gaps = 1/53 (1%)
Frame = -3
Query: 178 KGMIKKFSNI-NKTLKTYIATGFEPSDELTGGDWYADGKLDTEFIDALKRTCL 23
K +IK+ NI NK K Y+A FEPS E+TGGDWY G LDT+FI+ +K CL
Sbjct: 69 KNLIKEVVNIQNKGRKHYMAAEFEPSKEITGGDWYTQGSLDTDFINLVKEVCL 121
>ref|XP_003529842.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
[Glycine max]
Length = 229
Score = 63.5 bits (153), Expect = 3e-08
Identities = 27/59 (45%), Positives = 42/59 (71%), Gaps = 1/59 (1%)
Frame = -3
Query: 184 LDKGMIKKFSNI-NKTLKTYIATGFEPSDELTGGDWYADGKLDTEFIDALKRTCLMGIK 11
+ K ++K+ N+ N++ K +A+ FEPS+E++GG+WY +GKLDTEFID L C I+
Sbjct: 65 ITKKLVKEVVNVQNRSKKLLMASDFEPSNEISGGEWYTEGKLDTEFIDKLSEACFSSIR 123
>ref|XP_002509507.1| DNA-directed RNA polymerase III subunit F, putative [Ricinus
communis] gi|223549406|gb|EEF50894.1| DNA-directed RNA
polymerase III subunit F, putative [Ricinus communis]
Length = 236
Score = 63.2 bits (152), Expect = 4e-08
Identities = 31/52 (59%), Positives = 36/52 (69%), Gaps = 1/52 (1%)
Frame = -3
Query: 178 KGMIKKFSNI-NKTLKTYIATGFEPSDELTGGDWYADGKLDTEFIDALKRTC 26
K +IK+ NI NK K Y+AT FEPS E+TGG WY +G LDTEFI LK C
Sbjct: 66 KNLIKEVVNIQNKGRKHYMATEFEPSKEITGGAWYVEGNLDTEFIKLLKEVC 117
>ref|XP_007135413.1| hypothetical protein PHAVU_010G127200g [Phaseolus vulgaris]
gi|561008458|gb|ESW07407.1| hypothetical protein
PHAVU_010G127200g [Phaseolus vulgaris]
Length = 236
Score = 62.8 bits (151), Expect = 5e-08
Identities = 31/61 (50%), Positives = 41/61 (67%), Gaps = 1/61 (1%)
Frame = -3
Query: 184 LDKGMIKKFSNI-NKTLKTYIATGFEPSDELTGGDWYADGKLDTEFIDALKRTCLMGIKD 8
+ K +IK+ NI NK+ K +A FEPS E+TGG+WY +G+LDT+ IDAL CL I
Sbjct: 64 ISKTLIKEVVNIQNKSKKVLMAMEFEPSKEITGGEWYTEGRLDTQLIDALSDVCLKLISR 123
Query: 7 K 5
K
Sbjct: 124 K 124
>gb|AFK40562.1| unknown [Lotus japonicus]
Length = 232
Score = 62.8 bits (151), Expect = 5e-08
Identities = 29/50 (58%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Frame = -3
Query: 181 DKGMIKKFSNI-NKTLKTYIATGFEPSDELTGGDWYADGKLDTEFIDALK 35
DK ++K+ NI ++ K Y+A FEPS ELTGGDWY DGK DT+FI+A K
Sbjct: 61 DKNLVKEVVNIQSRGKKRYMAVDFEPSKELTGGDWYTDGKFDTDFINAAK 110
>ref|XP_002297621.2| hypothetical protein POPTR_0001s04090g [Populus trichocarpa]
gi|550346475|gb|EEE82426.2| hypothetical protein
POPTR_0001s04090g [Populus trichocarpa]
Length = 291
Score = 62.0 bits (149), Expect = 8e-08
Identities = 30/59 (50%), Positives = 42/59 (71%), Gaps = 1/59 (1%)
Frame = -3
Query: 178 KGMIKKFSNI-NKTLKTYIATGFEPSDELTGGDWYADGKLDTEFIDALKRTCLMGIKDK 5
K +IK+ NI NK K ++AT FEPS E++GG WY +G LDTEFI++L++ C I+ K
Sbjct: 121 KNLIKEVVNIQNKGRKHFMATEFEPSKEISGGAWYLEGSLDTEFIESLRQLCKRQIEKK 179
>dbj|BAJ53222.1| JHL06P13.1 [Jatropha curcas]
Length = 235
Score = 61.2 bits (147), Expect = 1e-07
Identities = 33/64 (51%), Positives = 42/64 (65%), Gaps = 3/64 (4%)
Frame = -3
Query: 208 TLLNKRKRL--DKGMIKKFSNI-NKTLKTYIATGFEPSDELTGGDWYADGKLDTEFIDAL 38
T++NK ++ K +IK+ NI NK K Y+AT FEPS E+TGG WY +G LDT FI L
Sbjct: 54 TVVNKSLKVLQAKNLIKEVVNIQNKGRKYYMATEFEPSKEITGGTWYVEGNLDTMFIGVL 113
Query: 37 KRTC 26
K C
Sbjct: 114 KDQC 117
>emb|CBI33284.3| unnamed protein product [Vitis vinifera]
Length = 300
Score = 61.2 bits (147), Expect = 1e-07
Identities = 30/53 (56%), Positives = 38/53 (71%), Gaps = 1/53 (1%)
Frame = -3
Query: 178 KGMIKKFSNI-NKTLKTYIATGFEPSDELTGGDWYADGKLDTEFIDALKRTCL 23
K +IK+ NI +K K Y+A FEPS ELTGG WY +G LDTE+I LK+TC+
Sbjct: 129 KKLIKEVVNIQSKGRKHYMAVEFEPSKELTGGAWYVEGNLDTEYIKILKKTCV 181
>ref|XP_003635557.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like [Vitis
vinifera]
Length = 239
Score = 61.2 bits (147), Expect = 1e-07
Identities = 30/53 (56%), Positives = 38/53 (71%), Gaps = 1/53 (1%)
Frame = -3
Query: 178 KGMIKKFSNI-NKTLKTYIATGFEPSDELTGGDWYADGKLDTEFIDALKRTCL 23
K +IK+ NI +K K Y+A FEPS ELTGG WY +G LDTE+I LK+TC+
Sbjct: 68 KKLIKEVVNIQSKGRKHYMAVEFEPSKELTGGAWYVEGNLDTEYIKILKKTCV 120
>ref|XP_004977282.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
[Setaria italica]
Length = 259
Score = 60.8 bits (146), Expect = 2e-07
Identities = 25/57 (43%), Positives = 43/57 (75%), Gaps = 1/57 (1%)
Frame = -3
Query: 193 RKRLDKGMIKKFSNI-NKTLKTYIATGFEPSDELTGGDWYADGKLDTEFIDALKRTC 26
R + G++K+ S++ +++ K ++AT F+PSDE+TGG WY DG+LDT+ + A++R C
Sbjct: 89 RTLVGHGLLKEVSDVRHRSRKIFMATDFQPSDEITGGTWYHDGRLDTDAVSAVRRRC 145
>ref|XP_004148278.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
[Cucumis sativus] gi|449506569|ref|XP_004162785.1|
PREDICTED: DNA-directed RNA polymerase III subunit
RPC6-like [Cucumis sativus]
Length = 243
Score = 60.8 bits (146), Expect = 2e-07
Identities = 33/77 (42%), Positives = 47/77 (61%), Gaps = 2/77 (2%)
Frame = -3
Query: 229 EMSRAQSTLLNKRKRLD-KGMIKKFSNI-NKTLKTYIATGFEPSDELTGGDWYADGKLDT 56
E A+S + K L KG+IK + NK K Y++ FEP+ ELTGG+WY DG+LD
Sbjct: 54 ETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKELTGGNWYRDGELDK 113
Query: 55 EFIDALKRTCLMGIKDK 5
++I+ LK+ C I+ K
Sbjct: 114 DYINTLKQVCARMIQRK 130
>ref|XP_002324707.1| hypothetical protein POPTR_0018s04220g [Populus trichocarpa]
gi|222866141|gb|EEF03272.1| hypothetical protein
POPTR_0018s04220g [Populus trichocarpa]
Length = 239
Score = 60.8 bits (146), Expect = 2e-07
Identities = 29/52 (55%), Positives = 39/52 (75%), Gaps = 1/52 (1%)
Frame = -3
Query: 178 KGMIKKFSNI-NKTLKTYIATGFEPSDELTGGDWYADGKLDTEFIDALKRTC 26
K +IK+ NI NK K ++AT FEPS E++GG WY +G LDTEFI++LK+ C
Sbjct: 69 KKLIKEVVNIQNKGRKHFMATEFEPSKEISGGAWYLEGSLDTEFIESLKQLC 120
>ref|XP_007023168.1| DNA-directed RNA polymerase III subunit rpc6, putative isoform 1
[Theobroma cacao] gi|590615245|ref|XP_007023169.1|
DNA-directed RNA polymerase III subunit rpc6, putative
isoform 1 [Theobroma cacao] gi|508778534|gb|EOY25790.1|
DNA-directed RNA polymerase III subunit rpc6, putative
isoform 1 [Theobroma cacao] gi|508778535|gb|EOY25791.1|
DNA-directed RNA polymerase III subunit rpc6, putative
isoform 1 [Theobroma cacao]
Length = 237
Score = 60.5 bits (145), Expect = 2e-07
Identities = 28/54 (51%), Positives = 38/54 (70%), Gaps = 1/54 (1%)
Frame = -3
Query: 184 LDKGMIKKFSNI-NKTLKTYIATGFEPSDELTGGDWYADGKLDTEFIDALKRTC 26
L K +IK+ NI N+ K +I+ FEPS+E+TGG WY +G LDTE+I+ LK C
Sbjct: 65 LAKNLIKEVKNIQNRGRKHFISAEFEPSNEITGGAWYVEGSLDTEYINVLKEQC 118
>emb|CBI36309.3| unnamed protein product [Vitis vinifera]
Length = 493
Score = 60.5 bits (145), Expect = 2e-07
Identities = 30/53 (56%), Positives = 37/53 (69%), Gaps = 1/53 (1%)
Frame = -3
Query: 178 KGMIKKFSNI-NKTLKTYIATGFEPSDELTGGDWYADGKLDTEFIDALKRTCL 23
K +IK+ NI +K K Y+A FEPS ELTGG WY +G LDTE+I LK TC+
Sbjct: 158 KKLIKEVVNIQSKGRKHYMAVEFEPSKELTGGAWYVEGNLDTEYIKILKETCV 210