BLASTX nr result
ID: Paeonia25_contig00034568
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Paeonia25_contig00034568
(789 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI27412.3| unnamed protein product [Vitis vinifera] 398 e-108
ref|XP_002267464.1| PREDICTED: DNA-directed RNA polymerase 1, mi... 398 e-108
ref|XP_007225383.1| hypothetical protein PRUPE_ppa000780mg [Prun... 390 e-106
ref|XP_002311418.2| hypothetical protein POPTR_0008s11200g [Popu... 389 e-106
ref|XP_004239009.1| PREDICTED: DNA-directed RNA polymerase 1, mi... 384 e-104
ref|XP_006348633.1| PREDICTED: DNA-directed RNA polymerase 1, mi... 383 e-104
ref|XP_002315996.2| DNA-directed RNA polymerase family protein [... 382 e-104
emb|CAC95019.1| mitochondrial RNA polymerase [Nicotiana sylvestris] 381 e-103
sp|Q8L6J5.2|RPO1B_TOBAC RecName: Full=DNA-directed RNA polymeras... 381 e-103
dbj|BAB69063.1| T7 bacteriophage-type single subunit RNA polymer... 380 e-103
sp|Q93Y94.1|RPOT1_NICSY RecName: Full=DNA-directed RNA polymeras... 380 e-103
emb|CAC82574.2| phage-type RNA polymerase [Nicotiana tabacum] 379 e-103
ref|XP_007045723.1| DNA-directed RNA polymerase isoform 3 [Theob... 379 e-103
ref|XP_007045721.1| DNA-directed RNA polymerase isoform 1 [Theob... 379 e-103
ref|XP_002514571.1| DNA-directed RNA polymerase 2, chloroplast/m... 378 e-102
gb|EYU28900.1| hypothetical protein MIMGU_mgv1a000798mg [Mimulus... 376 e-102
ref|XP_004297187.1| PREDICTED: DNA-directed RNA polymerase 1, mi... 369 e-100
ref|XP_006484275.1| PREDICTED: DNA-directed RNA polymerase 1B, m... 364 2e-98
ref|XP_006437832.1| hypothetical protein CICLE_v10030633mg [Citr... 364 2e-98
ref|XP_002278535.1| PREDICTED: DNA-directed RNA polymerase 2, ch... 363 3e-98
>emb|CBI27412.3| unnamed protein product [Vitis vinifera]
Length = 810
Score = 398 bits (1023), Expect = e-108
Identities = 197/248 (79%), Positives = 219/248 (88%), Gaps = 3/248 (1%)
Frame = +1
Query: 55 SARVVQAASQIGEALEHEVRIHSFLEKTKKKSIAKD-PKSESDPVIKEEGKLRKKVTTLI 231
SARVVQAA IGEA+EHEVRI F+EKTKKKS + + P S+PV KE+ KLRKKV+ L+
Sbjct: 76 SARVVQAACHIGEAIEHEVRIQRFMEKTKKKSASSNNPDGGSNPVTKEQEKLRKKVSMLM 135
Query: 232 KKQKLQQVREIVKGRDDSKPWGQDTQVKVGCRLIQLLMETAYIQPPVDQLGDGPPDIRPA 411
KKQKLQQVR+IVK +DDSKPWGQD VKVG RLI+LL+ETAYIQPP DQLGDGPPDIRPA
Sbjct: 136 KKQKLQQVRQIVKRQDDSKPWGQDANVKVGSRLIELLIETAYIQPPADQLGDGPPDIRPA 195
Query: 412 FVHTLKTVVKETH--SRRYGVIECDPLVRKGLEKSARHMVIPYMPMLVPPLNWIGYDRGA 585
FVHTLKTV+KET +RRYGVIECDPLVRKGLEK+ARHMVIPYMPMLVPPLNW GYD+GA
Sbjct: 196 FVHTLKTVIKETQKGTRRYGVIECDPLVRKGLEKTARHMVIPYMPMLVPPLNWTGYDKGA 255
Query: 586 YLFLPSYVMRTHGAKQQREAVKRTSRKQLEPVFEALDTLGNAKWRINKRVLSIIDRIWSS 765
YLFLPSYVMR HGA+QQREA+KR RK LEP FEAL+TLGN KWRINKRVL +IDRIW+S
Sbjct: 256 YLFLPSYVMRIHGARQQREAIKRAPRKALEPAFEALNTLGNTKWRINKRVLGVIDRIWAS 315
Query: 766 GGQLADLV 789
GG+LADLV
Sbjct: 316 GGRLADLV 323
>ref|XP_002267464.1| PREDICTED: DNA-directed RNA polymerase 1, mitochondrial [Vitis
vinifera]
Length = 978
Score = 398 bits (1023), Expect = e-108
Identities = 197/248 (79%), Positives = 219/248 (88%), Gaps = 3/248 (1%)
Frame = +1
Query: 55 SARVVQAASQIGEALEHEVRIHSFLEKTKKKSIAKD-PKSESDPVIKEEGKLRKKVTTLI 231
SARVVQAA IGEA+EHEVRI F+EKTKKKS + + P S+PV KE+ KLRKKV+ L+
Sbjct: 244 SARVVQAACHIGEAIEHEVRIQRFMEKTKKKSASSNNPDGGSNPVTKEQEKLRKKVSMLM 303
Query: 232 KKQKLQQVREIVKGRDDSKPWGQDTQVKVGCRLIQLLMETAYIQPPVDQLGDGPPDIRPA 411
KKQKLQQVR+IVK +DDSKPWGQD VKVG RLI+LL+ETAYIQPP DQLGDGPPDIRPA
Sbjct: 304 KKQKLQQVRQIVKRQDDSKPWGQDANVKVGSRLIELLIETAYIQPPADQLGDGPPDIRPA 363
Query: 412 FVHTLKTVVKETH--SRRYGVIECDPLVRKGLEKSARHMVIPYMPMLVPPLNWIGYDRGA 585
FVHTLKTV+KET +RRYGVIECDPLVRKGLEK+ARHMVIPYMPMLVPPLNW GYD+GA
Sbjct: 364 FVHTLKTVIKETQKGTRRYGVIECDPLVRKGLEKTARHMVIPYMPMLVPPLNWTGYDKGA 423
Query: 586 YLFLPSYVMRTHGAKQQREAVKRTSRKQLEPVFEALDTLGNAKWRINKRVLSIIDRIWSS 765
YLFLPSYVMR HGA+QQREA+KR RK LEP FEAL+TLGN KWRINKRVL +IDRIW+S
Sbjct: 424 YLFLPSYVMRIHGARQQREAIKRAPRKALEPAFEALNTLGNTKWRINKRVLGVIDRIWAS 483
Query: 766 GGQLADLV 789
GG+LADLV
Sbjct: 484 GGRLADLV 491
>ref|XP_007225383.1| hypothetical protein PRUPE_ppa000780mg [Prunus persica]
gi|462422319|gb|EMJ26582.1| hypothetical protein
PRUPE_ppa000780mg [Prunus persica]
Length = 1006
Score = 390 bits (1002), Expect = e-106
Identities = 193/263 (73%), Positives = 218/263 (82%), Gaps = 18/263 (6%)
Frame = +1
Query: 55 SARVVQAASQIGEALEHEVRIHSFLEKTKKKSIAKDPKSESDPV---------------- 186
S RVVQAA IGEA+EHEVRIH FLEKTKKK D K+E+D V
Sbjct: 257 SVRVVQAACAIGEAIEHEVRIHRFLEKTKKKKNTIDKKAEADSVPVTIEQEKLADEQEKL 316
Query: 187 IKEEGKLRKKVTTLIKKQKLQQVREIVKGRDDSKPWGQDTQVKVGCRLIQLLMETAYIQP 366
KE+ +LRKKV LIK+QK+QQVR IVK ++D KPWGQ+ VKVGCRLIQLLM+TAYIQP
Sbjct: 317 TKEQERLRKKVNKLIKRQKMQQVRGIVKEQEDLKPWGQEAHVKVGCRLIQLLMDTAYIQP 376
Query: 367 PVDQLGDGPPDIRPAFVHTLKTVVKETH--SRRYGVIECDPLVRKGLEKSARHMVIPYMP 540
PVDQ+GDGPPDIRPAFVH LKT+ ++T SRRYGVIECDP+VRKG+EK+ARHMV+PYMP
Sbjct: 377 PVDQIGDGPPDIRPAFVHNLKTITRDTQKTSRRYGVIECDPIVRKGMEKTARHMVMPYMP 436
Query: 541 MLVPPLNWIGYDRGAYLFLPSYVMRTHGAKQQREAVKRTSRKQLEPVFEALDTLGNAKWR 720
MLVPP+NW GYDRGAYLFLPSYVMRTHGAKQQRE VKRT RKQLEPVFEALDTLG+ KWR
Sbjct: 437 MLVPPINWTGYDRGAYLFLPSYVMRTHGAKQQREVVKRTPRKQLEPVFEALDTLGSTKWR 496
Query: 721 INKRVLSIIDRIWSSGGQLADLV 789
+NKRVL +IDRIW+SGG+LADLV
Sbjct: 497 VNKRVLGVIDRIWASGGRLADLV 519
>ref|XP_002311418.2| hypothetical protein POPTR_0008s11200g [Populus trichocarpa]
gi|550332836|gb|EEE88785.2| hypothetical protein
POPTR_0008s11200g [Populus trichocarpa]
Length = 988
Score = 389 bits (999), Expect = e-106
Identities = 196/256 (76%), Positives = 218/256 (85%), Gaps = 11/256 (4%)
Frame = +1
Query: 55 SARVVQAASQIGEALEHEVRIHSFLEKTKKKSI--AKDPKSESDPVI-------KEEGKL 207
S RVVQAAS +GEA+EHE RIH FLEKTKK+ AK + ESD I KE+ KL
Sbjct: 246 SIRVVQAASVVGEAIEHEGRIHKFLEKTKKRKNVEAKISEGESDAAIEEGEKLSKEQEKL 305
Query: 208 RKKVTTLIKKQKLQQVREIVKGRDDSKPWGQDTQVKVGCRLIQLLMETAYIQPPVDQLGD 387
RKKVTTLIKKQK+QQVR IVKG DDS+PWGQ+ VKVG RLIQL++ETAYIQPP+DQ+GD
Sbjct: 306 RKKVTTLIKKQKVQQVRRIVKGHDDSRPWGQEEHVKVGSRLIQLMIETAYIQPPIDQIGD 365
Query: 388 GPPDIRPAFVHTLKTVVKETH--SRRYGVIECDPLVRKGLEKSARHMVIPYMPMLVPPLN 561
GPPDIRPAFVHTLKT+ K+T SRRYGVIECDPLVRKGLEKSARHMVIPYMPMLVPPLN
Sbjct: 366 GPPDIRPAFVHTLKTITKDTQKSSRRYGVIECDPLVRKGLEKSARHMVIPYMPMLVPPLN 425
Query: 562 WIGYDRGAYLFLPSYVMRTHGAKQQREAVKRTSRKQLEPVFEALDTLGNAKWRINKRVLS 741
W GYD+GA+LFLPSYVMR HG+KQQR+AVKR SR QLEPVF+ALDTLGN KWRINKRVL
Sbjct: 426 WTGYDQGAHLFLPSYVMRIHGSKQQRDAVKRASRNQLEPVFKALDTLGNTKWRINKRVLV 485
Query: 742 IIDRIWSSGGQLADLV 789
++DRIW+SGG LA LV
Sbjct: 486 VVDRIWASGGHLAGLV 501
>ref|XP_004239009.1| PREDICTED: DNA-directed RNA polymerase 1, mitochondrial-like
[Solanum lycopersicum]
Length = 993
Score = 384 bits (985), Expect = e-104
Identities = 187/245 (76%), Positives = 211/245 (86%)
Frame = +1
Query: 55 SARVVQAASQIGEALEHEVRIHSFLEKTKKKSIAKDPKSESDPVIKEEGKLRKKVTTLIK 234
SARVVQAAS IGEA+EHE RIH FLEKTKK ++ + + ++KE +LRKKV L+K
Sbjct: 262 SARVVQAASHIGEAIEHEARIHRFLEKTKKNALDGSLEETAGDIMKERERLRKKVKILMK 321
Query: 235 KQKLQQVREIVKGRDDSKPWGQDTQVKVGCRLIQLLMETAYIQPPVDQLGDGPPDIRPAF 414
KQKLQQVR+IVK +DD KPWGQD VKVGCRLIQ+L+ETAYIQPP DQL D PPDIRPAF
Sbjct: 322 KQKLQQVRKIVKQQDDEKPWGQDNLVKVGCRLIQILIETAYIQPPNDQLEDCPPDIRPAF 381
Query: 415 VHTLKTVVKETHSRRYGVIECDPLVRKGLEKSARHMVIPYMPMLVPPLNWIGYDRGAYLF 594
+HTLKTV SRRYGVI+CDPLVRKGL+K+ARHMVIPYMPMLVPP NW GYDRGAYLF
Sbjct: 382 MHTLKTVDTVKGSRRYGVIQCDPLVRKGLDKTARHMVIPYMPMLVPPQNWSGYDRGAYLF 441
Query: 595 LPSYVMRTHGAKQQREAVKRTSRKQLEPVFEALDTLGNAKWRINKRVLSIIDRIWSSGGQ 774
LPSY+MRTHGAKQQREAVKR +KQLEPVF+ALDTLGN KWR+NKRVL I+DRIW+SGG+
Sbjct: 442 LPSYIMRTHGAKQQREAVKRVPKKQLEPVFQALDTLGNTKWRVNKRVLGILDRIWASGGR 501
Query: 775 LADLV 789
LADLV
Sbjct: 502 LADLV 506
>ref|XP_006348633.1| PREDICTED: DNA-directed RNA polymerase 1, mitochondrial-like
[Solanum tuberosum]
Length = 993
Score = 383 bits (984), Expect = e-104
Identities = 186/245 (75%), Positives = 211/245 (86%)
Frame = +1
Query: 55 SARVVQAASQIGEALEHEVRIHSFLEKTKKKSIAKDPKSESDPVIKEEGKLRKKVTTLIK 234
SARVVQAAS IGEA+EHE RIH FLEKTKK ++ + + ++KE +LRKKV L+K
Sbjct: 262 SARVVQAASHIGEAIEHEARIHRFLEKTKKNALDGSLEETAGDIMKERERLRKKVKILMK 321
Query: 235 KQKLQQVREIVKGRDDSKPWGQDTQVKVGCRLIQLLMETAYIQPPVDQLGDGPPDIRPAF 414
KQKLQQVR+IVK +DD KPWGQD VKVGC+LIQ+L+ETAYIQPP DQL D PPDIRPAF
Sbjct: 322 KQKLQQVRKIVKQQDDEKPWGQDNLVKVGCKLIQILIETAYIQPPNDQLDDCPPDIRPAF 381
Query: 415 VHTLKTVVKETHSRRYGVIECDPLVRKGLEKSARHMVIPYMPMLVPPLNWIGYDRGAYLF 594
+HTLKTV SRRYGVI+CDPLVRKGL+K+ARHMVIPYMPMLVPP NW GYDRGAYLF
Sbjct: 382 MHTLKTVETVKGSRRYGVIQCDPLVRKGLDKTARHMVIPYMPMLVPPQNWSGYDRGAYLF 441
Query: 595 LPSYVMRTHGAKQQREAVKRTSRKQLEPVFEALDTLGNAKWRINKRVLSIIDRIWSSGGQ 774
LPSY+MRTHGAKQQREAVKR +KQLEPVF+ALDTLGN KWR+NKRVL I+DRIW+SGG+
Sbjct: 442 LPSYIMRTHGAKQQREAVKRVPKKQLEPVFQALDTLGNTKWRVNKRVLGILDRIWASGGR 501
Query: 775 LADLV 789
LADLV
Sbjct: 502 LADLV 506
>ref|XP_002315996.2| DNA-directed RNA polymerase family protein [Populus trichocarpa]
gi|550329816|gb|EEF02167.2| DNA-directed RNA polymerase
family protein [Populus trichocarpa]
Length = 862
Score = 382 bits (981), Expect = e-104
Identities = 188/256 (73%), Positives = 213/256 (83%), Gaps = 11/256 (4%)
Frame = +1
Query: 55 SARVVQAASQIGEALEHEVRIHSFLEKTKKKSIAKDPKSESDPVI---------KEEGKL 207
S RVVQAAS +GEA+E+E +IH FLEKTKK+ K+ SE + V KE+ KL
Sbjct: 120 SIRVVQAASVVGEAIENEAKIHKFLEKTKKRKNLKEKISEGESVAAIYEGEKLTKEQEKL 179
Query: 208 RKKVTTLIKKQKLQQVREIVKGRDDSKPWGQDTQVKVGCRLIQLLMETAYIQPPVDQLGD 387
RKKVTTL+KKQK+ QVR IVKG DDS PWGQ+ +KVG RLIQL++ETAYIQPP+DQ+GD
Sbjct: 180 RKKVTTLMKKQKVHQVRRIVKGHDDSMPWGQEAHLKVGSRLIQLMIETAYIQPPIDQIGD 239
Query: 388 GPPDIRPAFVHTLKTVVKETH--SRRYGVIECDPLVRKGLEKSARHMVIPYMPMLVPPLN 561
GPPDIRPAFVHTLKT+ K+T SRRYGVIECDPLVRKGLEKSARHMVIPYMPMLVPPLN
Sbjct: 240 GPPDIRPAFVHTLKTITKDTQKSSRRYGVIECDPLVRKGLEKSARHMVIPYMPMLVPPLN 299
Query: 562 WIGYDRGAYLFLPSYVMRTHGAKQQREAVKRTSRKQLEPVFEALDTLGNAKWRINKRVLS 741
W GYD+GAY FLPSYVMR HGAKQQR A+KR SR QLEPVF+ALDTLGN KWR+NKR+L
Sbjct: 300 WTGYDQGAYFFLPSYVMRIHGAKQQRVAIKRASRNQLEPVFKALDTLGNTKWRVNKRILG 359
Query: 742 IIDRIWSSGGQLADLV 789
+IDRIW+SGG LA LV
Sbjct: 360 VIDRIWASGGHLAGLV 375
>emb|CAC95019.1| mitochondrial RNA polymerase [Nicotiana sylvestris]
Length = 1002
Score = 381 bits (979), Expect = e-103
Identities = 186/246 (75%), Positives = 213/246 (86%), Gaps = 1/246 (0%)
Frame = +1
Query: 55 SARVVQAASQIGEALEHEVRIHSFLEKTKKKS-IAKDPKSESDPVIKEEGKLRKKVTTLI 231
SARVVQAAS IGEA+EHE RIH FLEKTKK + ++ D + ++KE +LRKKV L+
Sbjct: 270 SARVVQAASHIGEAIEHEARIHRFLEKTKKSNALSGDLEDTPGDIMKERERLRKKVKILM 329
Query: 232 KKQKLQQVREIVKGRDDSKPWGQDTQVKVGCRLIQLLMETAYIQPPVDQLGDGPPDIRPA 411
KKQKLQQVR+IVK +DD KPWGQD VKVGCRLIQ+LMETAYIQPP DQL D PPDIRPA
Sbjct: 330 KKQKLQQVRKIVKQQDDEKPWGQDNLVKVGCRLIQILMETAYIQPPNDQLDDCPPDIRPA 389
Query: 412 FVHTLKTVVKETHSRRYGVIECDPLVRKGLEKSARHMVIPYMPMLVPPLNWIGYDRGAYL 591
FVHTLKTV SRRYGVI+CDPLVRKGL+K+ARHMVIPYMPMLVPP +W+GYD+GAYL
Sbjct: 390 FVHTLKTVETMKGSRRYGVIQCDPLVRKGLDKTARHMVIPYMPMLVPPQSWLGYDKGAYL 449
Query: 592 FLPSYVMRTHGAKQQREAVKRTSRKQLEPVFEALDTLGNAKWRINKRVLSIIDRIWSSGG 771
FLPSY+MRTHGAKQQREAVKR +KQLEPVF+ALDTLGN KWR+N++VL I+DRIW+SGG
Sbjct: 450 FLPSYIMRTHGAKQQREAVKRVPKKQLEPVFQALDTLGNTKWRLNRKVLGIVDRIWASGG 509
Query: 772 QLADLV 789
+LADLV
Sbjct: 510 RLADLV 515
>sp|Q8L6J5.2|RPO1B_TOBAC RecName: Full=DNA-directed RNA polymerase 1B, mitochondrial; AltName:
Full=NictaRpoT1-tom; AltName: Full=T7 bacteriophage-type
single subunit RNA polymerase 1B; Flags: Precursor
Length = 1002
Score = 381 bits (978), Expect = e-103
Identities = 185/246 (75%), Positives = 213/246 (86%), Gaps = 1/246 (0%)
Frame = +1
Query: 55 SARVVQAASQIGEALEHEVRIHSFLEKTKKKS-IAKDPKSESDPVIKEEGKLRKKVTTLI 231
SARVVQAAS IGEA+EHE RIH FLEKTKK + ++ D + ++KE +LRKKV L+
Sbjct: 270 SARVVQAASYIGEAIEHEARIHRFLEKTKKSNALSGDLEETPGDMMKERERLRKKVKILM 329
Query: 232 KKQKLQQVREIVKGRDDSKPWGQDTQVKVGCRLIQLLMETAYIQPPVDQLGDGPPDIRPA 411
KKQKL+QVR+IVK +DD KPWGQD VKVGCRLIQ+LMETAYIQPP DQL DGPPDIRPA
Sbjct: 330 KKQKLRQVRKIVKQQDDEKPWGQDNLVKVGCRLIQILMETAYIQPPNDQLDDGPPDIRPA 389
Query: 412 FVHTLKTVVKETHSRRYGVIECDPLVRKGLEKSARHMVIPYMPMLVPPLNWIGYDRGAYL 591
FVHTLKTV SRRYGVI+CDPLVRKGL+K+ARHMVIPYMPMLVPP +W+GYD+G YL
Sbjct: 390 FVHTLKTVETMKGSRRYGVIQCDPLVRKGLDKTARHMVIPYMPMLVPPQSWLGYDKGGYL 449
Query: 592 FLPSYVMRTHGAKQQREAVKRTSRKQLEPVFEALDTLGNAKWRINKRVLSIIDRIWSSGG 771
FLPSY+MRTHGAKQQREAVKR +KQLEPVF+ALDTLGN KWR+N++VL I+DRIW+SGG
Sbjct: 450 FLPSYIMRTHGAKQQREAVKRVPKKQLEPVFQALDTLGNTKWRVNRKVLGIVDRIWASGG 509
Query: 772 QLADLV 789
+LADLV
Sbjct: 510 RLADLV 515
>dbj|BAB69063.1| T7 bacteriophage-type single subunit RNA polymerase [Nicotiana
sylvestris]
Length = 1002
Score = 380 bits (976), Expect = e-103
Identities = 185/246 (75%), Positives = 213/246 (86%), Gaps = 1/246 (0%)
Frame = +1
Query: 55 SARVVQAASQIGEALEHEVRIHSFLEKTKKKS-IAKDPKSESDPVIKEEGKLRKKVTTLI 231
SARVVQAAS IGEA+EHE RIH FLEKTKK + ++ D + ++KE ++RKKV L+
Sbjct: 270 SARVVQAASHIGEAIEHEARIHRFLEKTKKSNALSGDLEDTPGDIMKERERVRKKVKILM 329
Query: 232 KKQKLQQVREIVKGRDDSKPWGQDTQVKVGCRLIQLLMETAYIQPPVDQLGDGPPDIRPA 411
KKQKLQQVR+IVK +DD KPWGQD VKVGCRLIQ+LMETAYIQPP DQL D PPDIRPA
Sbjct: 330 KKQKLQQVRKIVKQQDDEKPWGQDNLVKVGCRLIQILMETAYIQPPNDQLDDCPPDIRPA 389
Query: 412 FVHTLKTVVKETHSRRYGVIECDPLVRKGLEKSARHMVIPYMPMLVPPLNWIGYDRGAYL 591
FVHTLKTV SRRYGVI+CDPLVRKGL+K+ARHMVIPYMPMLVPP +W+GYD+GAYL
Sbjct: 390 FVHTLKTVETMKGSRRYGVIQCDPLVRKGLDKTARHMVIPYMPMLVPPQSWLGYDKGAYL 449
Query: 592 FLPSYVMRTHGAKQQREAVKRTSRKQLEPVFEALDTLGNAKWRINKRVLSIIDRIWSSGG 771
FLPSY+MRTHGAKQQREAVKR +KQLEPVF+ALDTLGN KWR+N++VL I+DRIW+SGG
Sbjct: 450 FLPSYIMRTHGAKQQREAVKRVPKKQLEPVFQALDTLGNTKWRLNRKVLGIVDRIWASGG 509
Query: 772 QLADLV 789
+LADLV
Sbjct: 510 RLADLV 515
>sp|Q93Y94.1|RPOT1_NICSY RecName: Full=DNA-directed RNA polymerase 1, mitochondrial; AltName:
Full=NsRpoT-A; AltName: Full=T7 bacteriophage-type single
subunit RNA polymerase 1; Flags: Precursor
gi|15824083|dbj|BAB69431.1| T7 bacteriophage-type single
subunit RNA polymerase [Nicotiana sylvestris]
Length = 1002
Score = 380 bits (976), Expect = e-103
Identities = 185/246 (75%), Positives = 213/246 (86%), Gaps = 1/246 (0%)
Frame = +1
Query: 55 SARVVQAASQIGEALEHEVRIHSFLEKTKKKS-IAKDPKSESDPVIKEEGKLRKKVTTLI 231
SARVVQAAS IGEA+EHE RIH FLEKTKK + ++ D + ++KE ++RKKV L+
Sbjct: 270 SARVVQAASHIGEAIEHEARIHRFLEKTKKSNALSGDLEDTPGDIMKERERVRKKVKILM 329
Query: 232 KKQKLQQVREIVKGRDDSKPWGQDTQVKVGCRLIQLLMETAYIQPPVDQLGDGPPDIRPA 411
KKQKLQQVR+IVK +DD KPWGQD VKVGCRLIQ+LMETAYIQPP DQL D PPDIRPA
Sbjct: 330 KKQKLQQVRKIVKQQDDEKPWGQDNLVKVGCRLIQILMETAYIQPPNDQLDDCPPDIRPA 389
Query: 412 FVHTLKTVVKETHSRRYGVIECDPLVRKGLEKSARHMVIPYMPMLVPPLNWIGYDRGAYL 591
FVHTLKTV SRRYGVI+CDPLVRKGL+K+ARHMVIPYMPMLVPP +W+GYD+GAYL
Sbjct: 390 FVHTLKTVETMKGSRRYGVIQCDPLVRKGLDKTARHMVIPYMPMLVPPQSWLGYDKGAYL 449
Query: 592 FLPSYVMRTHGAKQQREAVKRTSRKQLEPVFEALDTLGNAKWRINKRVLSIIDRIWSSGG 771
FLPSY+MRTHGAKQQREAVKR +KQLEPVF+ALDTLGN KWR+N++VL I+DRIW+SGG
Sbjct: 450 FLPSYIMRTHGAKQQREAVKRVPKKQLEPVFQALDTLGNTKWRLNRKVLGIVDRIWASGG 509
Query: 772 QLADLV 789
+LADLV
Sbjct: 510 RLADLV 515
>emb|CAC82574.2| phage-type RNA polymerase [Nicotiana tabacum]
Length = 1002
Score = 379 bits (973), Expect = e-103
Identities = 184/246 (74%), Positives = 213/246 (86%), Gaps = 1/246 (0%)
Frame = +1
Query: 55 SARVVQAASQIGEALEHEVRIHSFLEKTKKKS-IAKDPKSESDPVIKEEGKLRKKVTTLI 231
SARVVQAAS IGEA+EHE RIH FLEKTKK + ++ D + ++KE +LRKKV L+
Sbjct: 270 SARVVQAASYIGEAIEHEARIHRFLEKTKKSNALSGDLEETPGDMMKERERLRKKVKILM 329
Query: 232 KKQKLQQVREIVKGRDDSKPWGQDTQVKVGCRLIQLLMETAYIQPPVDQLGDGPPDIRPA 411
KKQKL+QVR+IVK +DD KPWGQD VKVGCRLIQ+LMETAYIQPP DQL DGPPDIRPA
Sbjct: 330 KKQKLRQVRKIVKQQDDEKPWGQDNLVKVGCRLIQILMETAYIQPPNDQLDDGPPDIRPA 389
Query: 412 FVHTLKTVVKETHSRRYGVIECDPLVRKGLEKSARHMVIPYMPMLVPPLNWIGYDRGAYL 591
FVHTLKTV SRRYGVI+CDPLVRKGL+K+ARHMVIPYMPMLVPP +W+GYD+G YL
Sbjct: 390 FVHTLKTVETMKGSRRYGVIQCDPLVRKGLDKTARHMVIPYMPMLVPPQSWLGYDKGGYL 449
Query: 592 FLPSYVMRTHGAKQQREAVKRTSRKQLEPVFEALDTLGNAKWRINKRVLSIIDRIWSSGG 771
FLPSY+MRTHGAKQQREAVKR +KQLEPVF+ALDTLGN KWR+N++VL I++RIW+SGG
Sbjct: 450 FLPSYIMRTHGAKQQREAVKRVPKKQLEPVFQALDTLGNTKWRVNRKVLGIVNRIWASGG 509
Query: 772 QLADLV 789
+LADLV
Sbjct: 510 RLADLV 515
>ref|XP_007045723.1| DNA-directed RNA polymerase isoform 3 [Theobroma cacao]
gi|508709658|gb|EOY01555.1| DNA-directed RNA polymerase
isoform 3 [Theobroma cacao]
Length = 932
Score = 379 bits (972), Expect = e-103
Identities = 189/253 (74%), Positives = 213/253 (84%), Gaps = 10/253 (3%)
Frame = +1
Query: 61 RVVQAASQIGEALEHEVRIHSFLEKTKKKSIA-KDPKSESDPV-------IKEEGKLRKK 216
RVVQAA QIGEA+EHE +I SFL KTKKK K P ES+PV +K++ KLRKK
Sbjct: 257 RVVQAACQIGEAIEHEAKIQSFLGKTKKKKTTDKKPDGESEPVTNKQEKLVKDQEKLRKK 316
Query: 217 VTTLIKKQKLQQVREIVKGRDDSKPWGQDTQVKVGCRLIQLLMETAYIQPPVDQLGDGPP 396
VT L+KKQK+ QVR+IVKG D SK WGQ+ VKVGCRLIQLL+E AYIQPPVDQLGD PP
Sbjct: 317 VTQLLKKQKVHQVRKIVKGHDTSKSWGQEAHVKVGCRLIQLLIENAYIQPPVDQLGDCPP 376
Query: 397 DIRPAFVHTLKTVVKETH--SRRYGVIECDPLVRKGLEKSARHMVIPYMPMLVPPLNWIG 570
DIRPAFVH+LKT+ K+ + SRRYGVIECD LVRKGLEK+ARHMVIPYMPMLVPP NW G
Sbjct: 377 DIRPAFVHSLKTITKDGNKGSRRYGVIECDLLVRKGLEKTARHMVIPYMPMLVPPQNWTG 436
Query: 571 YDRGAYLFLPSYVMRTHGAKQQREAVKRTSRKQLEPVFEALDTLGNAKWRINKRVLSIID 750
YDRGAYLFLPSYVMRTHGAKQQRE VKRT RKQLEP+FEALDTLGN KWRINKRVL ++D
Sbjct: 437 YDRGAYLFLPSYVMRTHGAKQQRETVKRTPRKQLEPIFEALDTLGNTKWRINKRVLGVVD 496
Query: 751 RIWSSGGQLADLV 789
R+W++GG++A LV
Sbjct: 497 RLWANGGRVASLV 509
>ref|XP_007045721.1| DNA-directed RNA polymerase isoform 1 [Theobroma cacao]
gi|590698457|ref|XP_007045722.1| DNA-directed RNA
polymerase isoform 1 [Theobroma cacao]
gi|508709656|gb|EOY01553.1| DNA-directed RNA polymerase
isoform 1 [Theobroma cacao] gi|508709657|gb|EOY01554.1|
DNA-directed RNA polymerase isoform 1 [Theobroma cacao]
Length = 996
Score = 379 bits (972), Expect = e-103
Identities = 189/253 (74%), Positives = 213/253 (84%), Gaps = 10/253 (3%)
Frame = +1
Query: 61 RVVQAASQIGEALEHEVRIHSFLEKTKKKSIA-KDPKSESDPV-------IKEEGKLRKK 216
RVVQAA QIGEA+EHE +I SFL KTKKK K P ES+PV +K++ KLRKK
Sbjct: 257 RVVQAACQIGEAIEHEAKIQSFLGKTKKKKTTDKKPDGESEPVTNKQEKLVKDQEKLRKK 316
Query: 217 VTTLIKKQKLQQVREIVKGRDDSKPWGQDTQVKVGCRLIQLLMETAYIQPPVDQLGDGPP 396
VT L+KKQK+ QVR+IVKG D SK WGQ+ VKVGCRLIQLL+E AYIQPPVDQLGD PP
Sbjct: 317 VTQLLKKQKVHQVRKIVKGHDTSKSWGQEAHVKVGCRLIQLLIENAYIQPPVDQLGDCPP 376
Query: 397 DIRPAFVHTLKTVVKETH--SRRYGVIECDPLVRKGLEKSARHMVIPYMPMLVPPLNWIG 570
DIRPAFVH+LKT+ K+ + SRRYGVIECD LVRKGLEK+ARHMVIPYMPMLVPP NW G
Sbjct: 377 DIRPAFVHSLKTITKDGNKGSRRYGVIECDLLVRKGLEKTARHMVIPYMPMLVPPQNWTG 436
Query: 571 YDRGAYLFLPSYVMRTHGAKQQREAVKRTSRKQLEPVFEALDTLGNAKWRINKRVLSIID 750
YDRGAYLFLPSYVMRTHGAKQQRE VKRT RKQLEP+FEALDTLGN KWRINKRVL ++D
Sbjct: 437 YDRGAYLFLPSYVMRTHGAKQQRETVKRTPRKQLEPIFEALDTLGNTKWRINKRVLGVVD 496
Query: 751 RIWSSGGQLADLV 789
R+W++GG++A LV
Sbjct: 497 RLWANGGRVASLV 509
>ref|XP_002514571.1| DNA-directed RNA polymerase 2, chloroplast/mitochondrial precursor,
putative [Ricinus communis] gi|223546175|gb|EEF47677.1|
DNA-directed RNA polymerase 2, chloroplast/mitochondrial
precursor, putative [Ricinus communis]
Length = 997
Score = 378 bits (971), Expect = e-102
Identities = 187/257 (72%), Positives = 218/257 (84%), Gaps = 12/257 (4%)
Frame = +1
Query: 55 SARVVQAASQIGEALEHEVRIHSFLEKTKKKSIA---KDPKSESDPVI-------KEEGK 204
S RVVQAA +GEA+EHE RIH FLEKTKKK + ++P+ + +PV KE+ K
Sbjct: 254 SVRVVQAACAVGEAIEHEARIHRFLEKTKKKKKSTKNEEPEGKLEPVTSDAEKLAKEQEK 313
Query: 205 LRKKVTTLIKKQKLQQVREIVKGRDDSKPWGQDTQVKVGCRLIQLLMETAYIQPPVDQLG 384
LRKKVT L+KKQK+QQVR + KG DDS PWGQ+ QVKVGCRLIQLL+ETAYIQPPV+QLG
Sbjct: 314 LRKKVTELMKKQKVQQVRGLTKGHDDSMPWGQEAQVKVGCRLIQLLIETAYIQPPVNQLG 373
Query: 385 DGPPDIRPAFVHTLKTVVKETH--SRRYGVIECDPLVRKGLEKSARHMVIPYMPMLVPPL 558
DG PDIRPAF+HTLK V+K+T SRRYGVIECDP+VR GLEKSARHMVIPYMPMLVPPL
Sbjct: 374 DGLPDIRPAFMHTLKNVMKDTQKTSRRYGVIECDPIVRNGLEKSARHMVIPYMPMLVPPL 433
Query: 559 NWIGYDRGAYLFLPSYVMRTHGAKQQREAVKRTSRKQLEPVFEALDTLGNAKWRINKRVL 738
NW GYD+GAYLFLPSYVMRTHGAKQQR AVKRT KQLEPV+EAL+TLGN KWRINK++L
Sbjct: 434 NWEGYDQGAYLFLPSYVMRTHGAKQQRNAVKRTPWKQLEPVYEALNTLGNTKWRINKKIL 493
Query: 739 SIIDRIWSSGGQLADLV 789
+++DRIW++GG+LA L+
Sbjct: 494 TVVDRIWANGGRLAGLI 510
>gb|EYU28900.1| hypothetical protein MIMGU_mgv1a000798mg [Mimulus guttatus]
Length = 983
Score = 376 bits (966), Expect = e-102
Identities = 181/246 (73%), Positives = 210/246 (85%), Gaps = 1/246 (0%)
Frame = +1
Query: 55 SARVVQAASQIGEALEHEVRIHSFLEKTKKKSIAKDPKSES-DPVIKEEGKLRKKVTTLI 231
SARVVQAA IGEA+EHEVRIH FL+ K+K+ E DP KE+ +LRKKV L+
Sbjct: 251 SARVVQAACHIGEAIEHEVRIHKFLDNCKRKNALNRTSEEGPDPEAKEQDRLRKKVKILM 310
Query: 232 KKQKLQQVREIVKGRDDSKPWGQDTQVKVGCRLIQLLMETAYIQPPVDQLGDGPPDIRPA 411
KKQK+QQVR IV+ +DD KPWGQD QVKVGCRLIQ+L +TAYIQPPVDQ DG PDIRPA
Sbjct: 311 KKQKVQQVRNIVRHQDDLKPWGQDAQVKVGCRLIQILTQTAYIQPPVDQRDDGAPDIRPA 370
Query: 412 FVHTLKTVVKETHSRRYGVIECDPLVRKGLEKSARHMVIPYMPMLVPPLNWIGYDRGAYL 591
FVHTLK V SRRYGVIECDPLVRKG+EK+ARHMVIPYMPMLVPPLNW GY+RGAYL
Sbjct: 371 FVHTLKCVETLKGSRRYGVIECDPLVRKGMEKTARHMVIPYMPMLVPPLNWTGYERGAYL 430
Query: 592 FLPSYVMRTHGAKQQREAVKRTSRKQLEPVFEALDTLGNAKWRINKRVLSIIDRIWSSGG 771
FLPSY+MRTHGAKQQREAVKRT +++LEP+F+AL+TLGN KWR+NKR+LS++DRIW++GG
Sbjct: 431 FLPSYMMRTHGAKQQREAVKRTPKQELEPIFQALNTLGNTKWRVNKRILSVVDRIWANGG 490
Query: 772 QLADLV 789
+LADLV
Sbjct: 491 RLADLV 496
>ref|XP_004297187.1| PREDICTED: DNA-directed RNA polymerase 1, mitochondrial-like
[Fragaria vesca subsp. vesca]
Length = 997
Score = 369 bits (946), Expect = e-100
Identities = 189/272 (69%), Positives = 214/272 (78%), Gaps = 27/272 (9%)
Frame = +1
Query: 55 SARVVQAASQIGEALEHEVRIHSFLEKTKKKSIA-KDPKSESDPVIKE------------ 195
+ +VVQAA IGEA+E+EVRI FLEKTKKKSIA K PK+ESD V E
Sbjct: 239 AVKVVQAACAIGEAIENEVRILRFLEKTKKKSIATKKPKAESDTVTSEHENLMNGLEQEQ 298
Query: 196 ------------EGKLRKKVTTLIKKQKLQQVREIVKGRDDSKPWGQDTQVKVGCRLIQL 339
E +LRKKVT L+K +KLQQV+EIVK +DD KPW Q+ VKVGCRLIQL
Sbjct: 299 LTKEQEQEKLTKEQRLRKKVTKLLKMKKLQQVKEIVKEQDDLKPWNQEAHVKVGCRLIQL 358
Query: 340 LMETAYIQPPVDQLGDGPPDIRPAFVHTLKTVVKETH--SRRYGVIECDPLVRKGLEKSA 513
+ ETAYIQP VDQLGD PPD RPAF+HTLKT+ KE +RRYGVIECDPLVRKG+EK+A
Sbjct: 359 MTETAYIQPAVDQLGDSPPDFRPAFMHTLKTITKEAQKTNRRYGVIECDPLVRKGMEKTA 418
Query: 514 RHMVIPYMPMLVPPLNWIGYDRGAYLFLPSYVMRTHGAKQQREAVKRTSRKQLEPVFEAL 693
RHMVIPYMPMLVPPLNW GYD+GA+LFLPSYVMRTHGAKQQR+ +K T RKQLEPVFEAL
Sbjct: 419 RHMVIPYMPMLVPPLNWTGYDKGAHLFLPSYVMRTHGAKQQRQVLKSTPRKQLEPVFEAL 478
Query: 694 DTLGNAKWRINKRVLSIIDRIWSSGGQLADLV 789
DTLG+ KWRINKRVL ++DRIW+SGG LADLV
Sbjct: 479 DTLGSTKWRINKRVLGVVDRIWASGGGLADLV 510
>ref|XP_006484275.1| PREDICTED: DNA-directed RNA polymerase 1B, mitochondrial-like
[Citrus sinensis]
Length = 980
Score = 364 bits (935), Expect = 2e-98
Identities = 182/252 (72%), Positives = 208/252 (82%), Gaps = 9/252 (3%)
Frame = +1
Query: 61 RVVQAASQIGEALEHEVRIHSFLEKTKKKSIAKDP-KSESDPV-------IKEEGKLRKK 216
RVVQAA QIGEA+E+E RI SF E TKKK+ + + +S+PV IKE+ KL+K+
Sbjct: 242 RVVQAACQIGEAIENEARIRSFFESTKKKNATDNNLEGDSEPVTNDPEKLIKEQDKLKKR 301
Query: 217 VTTLIKKQKLQQVREIVKGRDDSKPWGQDTQVKVGCRLIQLLMETAYIQPPVDQLGDGPP 396
VT+LIKKQKL+QVR IVKG D KPWGQD VKVGCRLIQLLMETAYIQPPVDQLGD PP
Sbjct: 302 VTSLIKKQKLRQVRGIVKGHVDLKPWGQDALVKVGCRLIQLLMETAYIQPPVDQLGDSPP 361
Query: 397 DIRPAFVHTLKTVVKET-HSRRYGVIECDPLVRKGLEKSARHMVIPYMPMLVPPLNWIGY 573
DIRPAFVHTLK+ KE RRYGVIECDPLVRKGLEK+ RHM+IPYMPMLVPPLNW GY
Sbjct: 362 DIRPAFVHTLKSFTKEALKGRRYGVIECDPLVRKGLEKTGRHMIIPYMPMLVPPLNWRGY 421
Query: 574 DRGAYLFLPSYVMRTHGAKQQREAVKRTSRKQLEPVFEALDTLGNAKWRINKRVLSIIDR 753
+RG + FLPSYVMRTHGA+QQRE +K T R QLEPVF+ALDTLG+ KWR+NKR+L +IDR
Sbjct: 422 NRGGHFFLPSYVMRTHGARQQRETIKMTPRSQLEPVFQALDTLGSTKWRVNKRILGVIDR 481
Query: 754 IWSSGGQLADLV 789
+W+SGG LA LV
Sbjct: 482 MWASGGCLAGLV 493
>ref|XP_006437832.1| hypothetical protein CICLE_v10030633mg [Citrus clementina]
gi|557540028|gb|ESR51072.1| hypothetical protein
CICLE_v10030633mg [Citrus clementina]
Length = 980
Score = 364 bits (934), Expect = 2e-98
Identities = 182/252 (72%), Positives = 208/252 (82%), Gaps = 9/252 (3%)
Frame = +1
Query: 61 RVVQAASQIGEALEHEVRIHSFLEKTKKKSIAKDP-KSESDPV-------IKEEGKLRKK 216
RVVQAA QIGEA+E+E RI SF E TKKK+ + + +S+PV IKE+ KL+K+
Sbjct: 242 RVVQAACQIGEAIENEARIRSFFESTKKKNATDNNLEGDSEPVTNDPEKLIKEQEKLKKR 301
Query: 217 VTTLIKKQKLQQVREIVKGRDDSKPWGQDTQVKVGCRLIQLLMETAYIQPPVDQLGDGPP 396
VT+LIKKQKL+QVR IVKG D KPWGQD VKVGCRLIQLLMETAYIQPPVDQLGD PP
Sbjct: 302 VTSLIKKQKLRQVRGIVKGHVDLKPWGQDALVKVGCRLIQLLMETAYIQPPVDQLGDSPP 361
Query: 397 DIRPAFVHTLKTVVKET-HSRRYGVIECDPLVRKGLEKSARHMVIPYMPMLVPPLNWIGY 573
DIRPAFVHTLK+ KE RRYGVIECDPLVRKGLEK+ RHM+IPYMPMLVPPLNW GY
Sbjct: 362 DIRPAFVHTLKSFTKEALKGRRYGVIECDPLVRKGLEKTGRHMIIPYMPMLVPPLNWRGY 421
Query: 574 DRGAYLFLPSYVMRTHGAKQQREAVKRTSRKQLEPVFEALDTLGNAKWRINKRVLSIIDR 753
+RG + FLPSYVMRTHGA+QQRE +K T R QLEPVF+ALDTLG+ KWR+NKR+L +IDR
Sbjct: 422 NRGGHFFLPSYVMRTHGARQQRETIKMTPRSQLEPVFQALDTLGSTKWRVNKRILGVIDR 481
Query: 754 IWSSGGQLADLV 789
+W+SGG LA LV
Sbjct: 482 MWASGGCLAGLV 493
>ref|XP_002278535.1| PREDICTED: DNA-directed RNA polymerase 2, chloroplastic/mitochondrial
[Vitis vinifera] gi|298204431|emb|CBI16911.3| unnamed
protein product [Vitis vinifera]
Length = 1035
Score = 363 bits (933), Expect = 3e-98
Identities = 180/251 (71%), Positives = 208/251 (82%), Gaps = 6/251 (2%)
Frame = +1
Query: 55 SARVVQAASQIGEALEHEVRIHSFLEKTKKKSIAKDPKSES---DPVIKEEGKLRKKVTT 225
S RVVQAA IG+A+E EVRIH+FLEKTK+K + KD E DPVI E+ KLRKKVT
Sbjct: 298 STRVVQAACVIGDAIEQEVRIHNFLEKTKRKKVGKDKNVEGGGFDPVIHEQEKLRKKVTN 357
Query: 226 LIKKQKLQQVREIVKGRDDSKPWGQDTQVKVGCRLIQLLMETAYIQPPVD-QLGDGPPDI 402
L+KKQKL R+IVKG D+SKPWG + + KVG RLI+LLM+TAYIQPPVD QL D PPDI
Sbjct: 358 LMKKQKLHAARQIVKGHDNSKPWGPEAKAKVGSRLIELLMQTAYIQPPVDNQLADTPPDI 417
Query: 403 RPAFVHTLKTVVKETHS--RRYGVIECDPLVRKGLEKSARHMVIPYMPMLVPPLNWIGYD 576
RPAFVHT KTV++E RR+GVIECDPLV+KGLE++ARHMVIPY+PMLVPPL W GYD
Sbjct: 418 RPAFVHTFKTVMREAKKIGRRFGVIECDPLVKKGLERTARHMVIPYVPMLVPPLKWTGYD 477
Query: 577 RGAYLFLPSYVMRTHGAKQQREAVKRTSRKQLEPVFEALDTLGNAKWRINKRVLSIIDRI 756
+GA+LFLPSYVMRTHGA+QQREAVKR R QLEPVFEAL+TLGN KWRINKR+ ++DRI
Sbjct: 478 KGAHLFLPSYVMRTHGARQQREAVKRAPRNQLEPVFEALNTLGNTKWRINKRLFDVVDRI 537
Query: 757 WSSGGQLADLV 789
W+ GG LADLV
Sbjct: 538 WAGGGCLADLV 548