BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia25_contig00033938
         (2280 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633738.1| PREDICTED: pentatricopeptide repeat-containi...   683   0.0  
emb|CAN82481.1| hypothetical protein VITISV_012747 [Vitis vinifera]   672   0.0  
ref|XP_002305195.1| pentatricopeptide repeat-containing family p...   660   0.0  
ref|XP_006482125.1| PREDICTED: pentatricopeptide repeat-containi...   660   0.0  
ref|XP_002531188.1| pentatricopeptide repeat-containing protein,...   642   0.0  
ref|XP_004171986.1| PREDICTED: pentatricopeptide repeat-containi...   605   e-170
ref|XP_007214531.1| hypothetical protein PRUPE_ppa014874mg, part...   604   e-170
ref|XP_004140361.1| PREDICTED: pentatricopeptide repeat-containi...   603   e-169
ref|XP_007022703.1| Pentatricopeptide repeat (PPR) superfamily p...   602   e-169
ref|XP_007022702.1| Pentatricopeptide repeat (PPR) superfamily p...   602   e-169
ref|XP_007022700.1| Pentatricopeptide repeat superfamily protein...   602   e-169
ref|XP_006430611.1| hypothetical protein CICLE_v10011485mg [Citr...   599   e-168
ref|XP_004301459.1| PREDICTED: pentatricopeptide repeat-containi...   598   e-168
gb|EXB56945.1| hypothetical protein L484_019990 [Morus notabilis]     576   e-161
ref|XP_007022701.1| Pentatricopeptide repeat superfamily protein...   546   e-152
ref|XP_007022704.1| Pentatricopeptide repeat (PPR) superfamily p...   546   e-152
ref|XP_004240257.1| PREDICTED: pentatricopeptide repeat-containi...   533   e-148
ref|XP_004486552.1| PREDICTED: pentatricopeptide repeat-containi...   521   e-145
gb|EYU26093.1| hypothetical protein MIMGU_mgv1a027076mg [Mimulus...   520   e-144
ref|XP_002887023.1| pentatricopeptide repeat-containing protein ...   506   e-140

>ref|XP_003633738.1| PREDICTED: pentatricopeptide repeat-containing protein At1g66345,
            mitochondrial-like [Vitis vinifera]
          Length = 547

 Score =  683 bits (1763), Expect = 0.0
 Identities = 341/547 (62%), Positives = 428/547 (78%), Gaps = 1/547 (0%)
 Frame = -2

Query: 2072 LSRIIPSLGSISVNN-LRYLHVSHPQFAVAKVIHTGIIPKGDAVVSTLCDSLRRGCNWDT 1896
            L R+IPSL SIS NN  R +H+  PQ  + +          ++ V+ LCDSLRRG NWD 
Sbjct: 4    LRRVIPSLISISTNNPTRTIHLHVPQLTLGET-------NSNSKVNMLCDSLRRGLNWDA 56

Query: 1895 LTRKFDTVELSDSIVDKVLLELKEPTDAKRALGFFHWSAQRNKKFEHGVRSYCITIQILV 1716
            L ++F ++EL++S V +VLLELK+P DAK+ALGFFHWSAQ  K  EHG+ SYCITI ILV
Sbjct: 57   LNQRFGSLELTESFVGRVLLELKKPIDAKQALGFFHWSAQC-KNLEHGLASYCITIHILV 115

Query: 1715 RAGLLVDARALLESVLKKNEGXXXXXXXXXXXSYKLTASDPFVFDLLVRTYAKLRMLHTA 1536
             A LL+DA++LLES LKKN G           SY +T S+P VFDLLV++Y+KLRM    
Sbjct: 116  GAQLLMDAQSLLESTLKKNAGSRFLVVDSLLSSYNITGSNPRVFDLLVQSYSKLRMFEIC 175

Query: 1535 FDVCRYLIKHGFSLKLITFNILFHVVQKSSHNLFVWEIYEFMIQNRTYPNEVTIRTMVSA 1356
            FDVC YL +HGFSL LI+FN L HVVQKS +   VW+IYE MI+ R YPNEV++  M+SA
Sbjct: 176  FDVCCYLEEHGFSLSLISFNTLLHVVQKSDNYPLVWKIYEHMIRVRKYPNEVSVSVMISA 235

Query: 1355 LCKEGKLQRFVDVLDRVHGKRCPPMVIVNTSLIFRIVEEGRIEEGMVLLKRMLQKNMIID 1176
            LCKEG LQ+FVD+LDR+HGKRC P+VIVNT +IFR++EEGR+E+GM++LKR+LQKNMI+D
Sbjct: 236  LCKEGALQKFVDMLDRIHGKRCSPIVIVNTCMIFRMLEEGRVEQGMLILKRLLQKNMILD 295

Query: 1175 TVAFSLVVHAKAKLGNIDSAWEVYEEMLKRGFHENSFVYTSFIGAYCREGRIEEASCLIQ 996
            T+++SL+ +AK K G +DSAWEVYEEML RGFH N+FVYT FIG++C EGRIEEA+ L+Q
Sbjct: 296  TISYSLIAYAKVKYGTLDSAWEVYEEMLNRGFHPNAFVYTLFIGSHCVEGRIEEANELMQ 355

Query: 995  EMEGKGLKPYGETYDTLIVGCAKGGKLEESLRFCEKMMEREIVPSCSAFNEMVANLCETD 816
            +ME  GL PY ET++ LI GC+K G+LEE LR CE+MM+R +VPSC AFN M   LCE+ 
Sbjct: 356  DMENAGLMPYDETFNLLIAGCSKAGRLEEGLRLCERMMQRGLVPSCWAFNLMAGKLCESG 415

Query: 815  DLKLANGMLTVLLDKGFIPDEITYSHFIAGYGKVGEVQEVLKLYFEMEYRSLSPGNSVFT 636
             +K A+ MLT+LLDKGF+PDEITYS+ IA YGK+GE+Q+VLKLY+EMEYRSLSPG   F 
Sbjct: 416  VVKRADEMLTLLLDKGFVPDEITYSNLIASYGKLGEIQQVLKLYYEMEYRSLSPGLLAFE 475

Query: 635  LLIGSLCQCGKLEEAEKYLKIMKDRSIAPSSCIYEALIASHYEKGDKKRALQLYKDMISD 456
             LI SLCQC KLE+AEKYL+IMKDRSIA S+C+YE LI+S++EKGD+ RA QL+ +M+S 
Sbjct: 476  SLIRSLCQCRKLEKAEKYLRIMKDRSIAISTCVYETLISSYFEKGDELRASQLHNEMVSR 535

Query: 455  GLKPSWS 435
            GLKPS S
Sbjct: 536  GLKPSCS 542


>emb|CAN82481.1| hypothetical protein VITISV_012747 [Vitis vinifera]
          Length = 642

 Score =  672 bits (1734), Expect = 0.0
 Identities = 334/539 (61%), Positives = 422/539 (78%), Gaps = 1/539 (0%)
 Frame = -2

Query: 2072 LSRIIPSLGSISVNN-LRYLHVSHPQFAVAKVIHTGIIPKGDAVVSTLCDSLRRGCNWDT 1896
            L R+IPSL SIS NN  R +H+  PQ  + +          ++ V+ LCDSLRRG NWD 
Sbjct: 4    LRRVIPSLISISTNNPTRTIHLHVPQLTLGET-------NSNSKVNMLCDSLRRGLNWDA 56

Query: 1895 LTRKFDTVELSDSIVDKVLLELKEPTDAKRALGFFHWSAQRNKKFEHGVRSYCITIQILV 1716
            L ++F ++EL++S V +VLLELK+P DAK+ALGFFHWSAQ  K  EHGV SYCITI ILV
Sbjct: 57   LNQRFGSLELTESFVGRVLLELKKPIDAKQALGFFHWSAQC-KNLEHGVASYCITIHILV 115

Query: 1715 RAGLLVDARALLESVLKKNEGXXXXXXXXXXXSYKLTASDPFVFDLLVRTYAKLRMLHTA 1536
             A LL+DA++LLES LKKN G           SY +T S+P VFDLLV++Y+KLRM    
Sbjct: 116  GAHLLMDAQSLLESTLKKNAGSRFLVVDSLLSSYNITGSNPRVFDLLVQSYSKLRMFEIC 175

Query: 1535 FDVCRYLIKHGFSLKLITFNILFHVVQKSSHNLFVWEIYEFMIQNRTYPNEVTIRTMVSA 1356
            FDVC YL +HGFSL LI+FN L HVVQKS +   VW+IYE MI+ R YPNEV++  M+SA
Sbjct: 176  FDVCCYLEEHGFSLSLISFNXLLHVVQKSDNYPLVWKIYEHMIRVRKYPNEVSVSVMISA 235

Query: 1355 LCKEGKLQRFVDVLDRVHGKRCPPMVIVNTSLIFRIVEEGRIEEGMVLLKRMLQKNMIID 1176
            LCKEG LQ+FVD+LDR+HGKRC P+VIVNT +IFR++EEGR+E+GM++LKR+LQKNMI+D
Sbjct: 236  LCKEGALQKFVDMLDRIHGKRCSPIVIVNTCMIFRMLEEGRVEQGMLILKRLLQKNMILD 295

Query: 1175 TVAFSLVVHAKAKLGNIDSAWEVYEEMLKRGFHENSFVYTSFIGAYCREGRIEEASCLIQ 996
            T+++SL+ +AK K G +DSAWEVYEEML RGFH N+FVYT FIG++C EGRIEEA+ L+Q
Sbjct: 296  TISYSLIAYAKVKYGTLDSAWEVYEEMLNRGFHPNAFVYTLFIGSHCVEGRIEEANELMQ 355

Query: 995  EMEGKGLKPYGETYDTLIVGCAKGGKLEESLRFCEKMMEREIVPSCSAFNEMVANLCETD 816
            +ME  GL PY ET++ LI GC+K G+LEE LR CE+MM+R +VPSC AFN M   LCE+ 
Sbjct: 356  DMENAGLMPYDETFNLLIAGCSKAGRLEEGLRLCERMMQRGLVPSCWAFNLMAGKLCESG 415

Query: 815  DLKLANGMLTVLLDKGFIPDEITYSHFIAGYGKVGEVQEVLKLYFEMEYRSLSPGNSVFT 636
             +K A+ MLT+LLDKGF+PDEITYS+ IA YGK+GE+Q+VLKLY+EMEYRSLSPG  VF 
Sbjct: 416  VVKRADEMLTLLLDKGFVPDEITYSNLIASYGKLGEIQQVLKLYYEMEYRSLSPGLLVFE 475

Query: 635  LLIGSLCQCGKLEEAEKYLKIMKDRSIAPSSCIYEALIASHYEKGDKKRALQLYKDMIS 459
             +I SLCQC KLE+AEKYL+IMKDRSIA S+C+YE LI+ ++EKGD+ RA QL+ +M++
Sbjct: 476  SIIRSLCQCRKLEKAEKYLRIMKDRSIAISTCVYETLISGYFEKGDELRASQLHNEMLT 534



 Score =  104 bits (260), Expect = 2e-19
 Identities = 65/281 (23%), Positives = 123/281 (43%), Gaps = 35/281 (12%)
 Frame = -2

Query: 1181 IDTVAFSLVVHAKAKLGNIDSAWEVYEEMLKRGFHENSFVYTSFIGAYCREGRIEEASCL 1002
            +  ++F+ ++H   K  N    W++YE M++   + N    +  I A C+EG +++   +
Sbjct: 189  LSLISFNXLLHVVQKSDNYPLVWKIYEHMIRVRKYPNEVSVSVMISALCKEGALQKFVDM 248

Query: 1001 IQEMEGKGLKPY-----------------------------------GETYDTLIVGCAK 927
            +  + GK   P                                      +Y  +     K
Sbjct: 249  LDRIHGKRCSPIVIVNTCMIFRMLEEGRVEQGMLILKRLLQKNMILDTISYSLIAYAKVK 308

Query: 926  GGKLEESLRFCEKMMEREIVPSCSAFNEMVANLCETDDLKLANGMLTVLLDKGFIPDEIT 747
             G L+ +    E+M+ R   P+   +   + + C    ++ AN ++  + + G +P + T
Sbjct: 309  YGTLDSAWEVYEEMLNRGFHPNAFVYTLFIGSHCVEGRIEEANELMQDMENAGLMPYDET 368

Query: 746  YSHFIAGYGKVGEVQEVLKLYFEMEYRSLSPGNSVFTLLIGSLCQCGKLEEAEKYLKIMK 567
            ++  IAG  K G ++E L+L   M  R L P    F L+ G LC+ G ++ A++ L ++ 
Sbjct: 369  FNLLIAGCSKAGRLEEGLRLCERMMQRGLVPSCWAFNLMAGKLCESGVVKRADEMLTLLL 428

Query: 566  DRSIAPSSCIYEALIASHYEKGDKKRALQLYKDMISDGLKP 444
            D+   P    Y  LIAS+ + G+ ++ L+LY +M    L P
Sbjct: 429  DKGFVPDEITYSNLIASYGKLGEIQQVLKLYYEMEYRSLSP 469


>ref|XP_002305195.1| pentatricopeptide repeat-containing family protein [Populus
            trichocarpa] gi|222848159|gb|EEE85706.1|
            pentatricopeptide repeat-containing family protein
            [Populus trichocarpa]
          Length = 556

 Score =  660 bits (1703), Expect = 0.0
 Identities = 335/553 (60%), Positives = 418/553 (75%), Gaps = 2/553 (0%)
 Frame = -2

Query: 2072 LSRIIPSLGSISVNNLRYLHVSHPQFAVAKVIHTGIIPKGDAVVSTLCDSLRRGCNWDTL 1893
            L R  PSL S  +    +  V    F VA+ +H G   + D VVS++CDSLRRG NWDTL
Sbjct: 4    LRRTFPSLISTPLKYSIHPRVCSSWFEVARFLHDGTKTESDTVVSSICDSLRRGYNWDTL 63

Query: 1892 TRKFDTVELSDSIVDKVLLELKEPTDAKRALGFFHWSAQRNKKFEHGVRSYCITIQILVR 1713
             RKF++++L++ +V  VLLELKEPTDAKRALGFFHWSA+RN  F HGV+SYC+ I IL++
Sbjct: 64   NRKFESLQLNNLLVKNVLLELKEPTDAKRALGFFHWSARRN--FVHGVQSYCLMIHILIQ 121

Query: 1712 AGLLVDARALLESVLKKNEGXXXXXXXXXXXS--YKLTASDPFVFDLLVRTYAKLRMLHT 1539
            A L++DA+ALLES+LKK+ G              YK+  S P VFDLLV+ YAK RM   
Sbjct: 122  ARLIMDAQALLESLLKKSVGDPTKFLVLDSLLSSYKIIISSPLVFDLLVQAYAKQRMFEI 181

Query: 1538 AFDVCRYLIKHGFSLKLITFNILFHVVQKSSHNLFVWEIYEFMIQNRTYPNEVTIRTMVS 1359
             FDVC  L +H F+L LI+FN L HVVQKS  +   W+IYE M+  RTYPNE TI +M+S
Sbjct: 182  GFDVCCRLEEHRFTLSLISFNTLIHVVQKSDKSPLAWKIYEHMLHRRTYPNEATIESMIS 241

Query: 1358 ALCKEGKLQRFVDVLDRVHGKRCPPMVIVNTSLIFRIVEEGRIEEGMVLLKRMLQKNMII 1179
            ALCKEGKLQ  V++LD++HGKRC P+VIVNT L+FRI+EEGR+E G+ LLK ML+KNMI+
Sbjct: 242  ALCKEGKLQTIVNMLDKIHGKRCSPVVIVNTCLVFRILEEGRVEPGLALLKMMLRKNMIL 301

Query: 1178 DTVAFSLVVHAKAKLGNIDSAWEVYEEMLKRGFHENSFVYTSFIGAYCREGRIEEASCLI 999
            DTVA+SL+V+AK KLGN++SA +VYEEMLKRGF+ NSFVYTSFIGAYC+E RIEEA+ L+
Sbjct: 302  DTVAYSLIVYAKVKLGNLNSAMQVYEEMLKRGFNANSFVYTSFIGAYCKEERIEEANQLL 361

Query: 998  QEMEGKGLKPYGETYDTLIVGCAKGGKLEESLRFCEKMMEREIVPSCSAFNEMVANLCET 819
            QEME  GLKPYG+T++ L+ GCAK G++EE+L +C+KMME   VPS SAFNEMV  LC  
Sbjct: 362  QEMENMGLKPYGDTFNFLLEGCAKAGRVEETLSYCKKMMEMGHVPSLSAFNEMVGKLCRI 421

Query: 818  DDLKLANGMLTVLLDKGFIPDEITYSHFIAGYGKVGEVQEVLKLYFEMEYRSLSPGNSVF 639
            +D+  AN MLT LLD+GF+ DEITYS+ I+GY K  ++QE+LKLY+EMEYRSLSPG   F
Sbjct: 422  EDVTRANEMLTNLLDEGFLADEITYSNLISGYAKNNQIQEMLKLYYEMEYRSLSPGLMGF 481

Query: 638  TLLIGSLCQCGKLEEAEKYLKIMKDRSIAPSSCIYEALIASHYEKGDKKRALQLYKDMIS 459
            T LI  LC CGKLEEAEKYL+IM  RS+ P   +YEALI  ++EKGDK+RAL LY +M+S
Sbjct: 482  TSLIKGLCNCGKLEEAEKYLRIMIGRSLNPREDVYEALIKVYFEKGDKRRALNLYNEMVS 541

Query: 458  DGLKPSWSNSGGA 420
             GLK   S+  GA
Sbjct: 542  KGLKLCCSHYLGA 554


>ref|XP_006482125.1| PREDICTED: pentatricopeptide repeat-containing protein At1g66345,
            mitochondrial-like isoform X1 [Citrus sinensis]
          Length = 553

 Score =  660 bits (1702), Expect = 0.0
 Identities = 324/519 (62%), Positives = 406/519 (78%), Gaps = 2/519 (0%)
 Frame = -2

Query: 1985 KVIHTGIIPKGDAVVSTLCDSLRRGCNWDTLTRKFDTVELSDSIVDKVLLELKEPTDAKR 1806
            K IH+   PK +++V+ +CD  RRG NWDTL+++F+++ L+DS+V+ VLLELKEP DAKR
Sbjct: 26   KFIHSTRKPKSNSLVTAICDCFRRGWNWDTLSKQFNSIHLNDSLVENVLLELKEPVDAKR 85

Query: 1805 ALGFFHWSAQRNKKFEHGVRSYCITIQILVRAGLLVDARALLESVLKKNEGXXXXXXXXX 1626
            ALGFFHWSA  +K ++H + SY +TI ILV+A LLVDARAL+ESVL+K+ G         
Sbjct: 86   ALGFFHWSAH-HKSYQHNLCSYSVTIHILVQARLLVDARALIESVLEKHIGDDSRFSVVD 144

Query: 1625 XXS--YKLTASDPFVFDLLVRTYAKLRMLHTAFDVCRYLIKHGFSLKLITFNILFHVVQK 1452
                 Y +  S P VFDLLV+TY+K+R+   AFDVC YL + GFSL LI+FN L HVV K
Sbjct: 145  SLLDTYNVADSIPLVFDLLVQTYSKMRLFEVAFDVCCYLEQRGFSLSLISFNTLIHVVTK 204

Query: 1451 SSHNLFVWEIYEFMIQNRTYPNEVTIRTMVSALCKEGKLQRFVDVLDRVHGKRCPPMVIV 1272
            S  N  VW IY+ M++N  YPNE TIRT++SALCK G+LQ +VD+LDR+HGKRC PMVIV
Sbjct: 205  SDRNDLVWRIYQHMLENIRYPNEATIRTLISALCKGGQLQTYVDMLDRIHGKRCSPMVIV 264

Query: 1271 NTSLIFRIVEEGRIEEGMVLLKRMLQKNMIIDTVAFSLVVHAKAKLGNIDSAWEVYEEML 1092
            NTSLI RI++E RIEEGMVLLKRML+KNMI DT+A+SL+V+AK K+GN++SA  VYEEML
Sbjct: 265  NTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMGNLESALVVYEEML 324

Query: 1091 KRGFHENSFVYTSFIGAYCREGRIEEASCLIQEMEGKGLKPYGETYDTLIVGCAKGGKLE 912
            KRGF  NSFVYT+FIGAYC  G+IEEA+CL+QEME  GLKPY ET++ LI GCAK  ++E
Sbjct: 325  KRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIE 384

Query: 911  ESLRFCEKMMEREIVPSCSAFNEMVANLCETDDLKLANGMLTVLLDKGFIPDEITYSHFI 732
            ESL +CE+MM R+++PSCSAFNEM+  LCE  + K ANGMLT+ LDKGF P+EITYSH I
Sbjct: 385  ESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNAKQANGMLTLALDKGFSPNEITYSHLI 444

Query: 731  AGYGKVGEVQEVLKLYFEMEYRSLSPGNSVFTLLIGSLCQCGKLEEAEKYLKIMKDRSIA 552
             GY K GE+QEVLKLY+EMEY+S+SP    +T LI SLCQCGKLEEA+KY KIMK  S+ 
Sbjct: 445  GGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLV 504

Query: 551  PSSCIYEALIASHYEKGDKKRALQLYKDMISDGLKPSWS 435
            P   IYE+L+  H EKG+K +AL L ++M+S+GLKPS S
Sbjct: 505  PGVDIYESLVGIHLEKGNKAKALHLCEEMVSEGLKPSTS 543


>ref|XP_002531188.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223529229|gb|EEF31203.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 619

 Score =  642 bits (1655), Expect = 0.0
 Identities = 332/553 (60%), Positives = 404/553 (73%), Gaps = 2/553 (0%)
 Frame = -2

Query: 2072 LSRIIPSLGSISVNNLRYLHVSHPQFAVAKVIHTGIIPKGDAVVSTLCDSLRRGCNWDTL 1893
            L RIIPSL S  V N     +   Q  V + +H    P GDA+V  +CDSLRRG NW +L
Sbjct: 4    LHRIIPSLLSRQVKNPSDSCLCSHQILVTRFVHNDAKPDGDAIVYAICDSLRRGHNWVSL 63

Query: 1892 TRKFDTVELSDSIVDKVLLELKEPTDAKRALGFFHWSAQRNKKFEHGVRSYCITIQILVR 1713
            + KF  VEL+  +V+KVLLELKEP DAKRALGFFHWSAQR K F HGV SYC+ + ILVR
Sbjct: 64   SGKFQYVELNHLLVEKVLLELKEPIDAKRALGFFHWSAQR-KNFVHGVWSYCLMVNILVR 122

Query: 1712 AGLLVDARALLESVLKKN--EGXXXXXXXXXXXSYKLTASDPFVFDLLVRTYAKLRMLHT 1539
            A LL DA+ALLES+LKKN  +            SYK+  S P VF+LLV+ YAKLR+   
Sbjct: 123  AQLLNDAQALLESILKKNVEDSSEFLIVDSLLDSYKIIVSSPLVFNLLVQAYAKLRLFEI 182

Query: 1538 AFDVCRYLIKHGFSLKLITFNILFHVVQKSSHNLFVWEIYEFMIQNRTYPNEVTIRTMVS 1359
             F +C YL +HGF L L++FN L HVVQKS     VW+IYE MI  R YPNE TIRTM++
Sbjct: 183  GFKICFYLEEHGFFLSLLSFNTLIHVVQKSDQYPLVWKIYEHMIHKRIYPNEATIRTMIN 242

Query: 1358 ALCKEGKLQRFVDVLDRVHGKRCPPMVIVNTSLIFRIVEEGRIEEGMVLLKRMLQKNMII 1179
            ALCKEGKLQ FVD+LDR+HGKRC P+VI+N  ++FRI++EGR++ G+ +LK MLQKNMI+
Sbjct: 243  ALCKEGKLQMFVDILDRIHGKRCRPLVIINACMVFRILQEGRVDVGIGILKGMLQKNMIL 302

Query: 1178 DTVAFSLVVHAKAKLGNIDSAWEVYEEMLKRGFHENSFVYTSFIGAYCREGRIEEASCLI 999
            DTVA+SL+V AK +LGN+DSA EVYE MLKRGF+ NSFV+T  IGAYC  G+IE+A+ L 
Sbjct: 303  DTVAYSLIVFAKVRLGNLDSALEVYEAMLKRGFNANSFVHTVLIGAYCNGGKIEKANQLF 362

Query: 998  QEMEGKGLKPYGETYDTLIVGCAKGGKLEESLRFCEKMMEREIVPSCSAFNEMVANLCET 819
             EM   GL+PY ET++ LI GCAK G++EE L + EKM+ER +VPS  AFN+M+A LCET
Sbjct: 363  GEMGTMGLEPYDETFNFLIEGCAKAGRVEECLSYFEKMIERGLVPSLLAFNKMIAKLCET 422

Query: 818  DDLKLANGMLTVLLDKGFIPDEITYSHFIAGYGKVGEVQEVLKLYFEMEYRSLSPGNSVF 639
             ++  AN  LT LLDKGF PDE TYS+ + GY +  ++QEVLKLY+EMEYR LSPG  VF
Sbjct: 423  GEVNQANTFLTRLLDKGFSPDETTYSYLMTGYERDNQIQEVLKLYYEMEYRPLSPGLLVF 482

Query: 638  TLLIGSLCQCGKLEEAEKYLKIMKDRSIAPSSCIYEALIASHYEKGDKKRALQLYKDMIS 459
            T LI SLC CGKLE+AEKYL+IMK RS+ PS  +YEALIA H EK D  RALQLY +MIS
Sbjct: 483  TPLIRSLCHCGKLEQAEKYLRIMKGRSLNPSQQVYEALIAGHLEKSDTARALQLYNEMIS 542

Query: 458  DGLKPSWSNSGGA 420
             G  P  S + GA
Sbjct: 543  KGFTPCCSYNFGA 555


>ref|XP_004171986.1| PREDICTED: pentatricopeptide repeat-containing protein At1g66345,
            mitochondrial-like [Cucumis sativus]
          Length = 539

 Score =  605 bits (1560), Expect = e-170
 Identities = 298/502 (59%), Positives = 382/502 (76%), Gaps = 2/502 (0%)
 Frame = -2

Query: 1952 DAVVSTLCDSLRRGCNWDTLTRKFDTVELSDSIVDKVLLELKEPTDAKRALGFFHWSAQR 1773
            DA V+++CDSL R  +WDTL+RKF  +EL+D +V KVLL+ ++P DAKRALGFFHWSA+R
Sbjct: 39   DATVNSICDSLTRRQSWDTLSRKFQFLELNDFLVQKVLLKFQQPVDAKRALGFFHWSAKR 98

Query: 1772 NKKFEHGVRSYCITIQILVRAGLLVDARALLESVLKKNEGXXXXXXXXXXXS--YKLTAS 1599
             K F HG +S+ I I ILV+A L++DARALLES+LKKNEG              Y++T S
Sbjct: 99   -KNFNHGPQSFGIMIHILVKARLVLDARALLESILKKNEGNSFDYSVVDSLMDSYEVTGS 157

Query: 1598 DPFVFDLLVRTYAKLRMLHTAFDVCRYLIKHGFSLKLITFNILFHVVQKSSHNLFVWEIY 1419
             PFVFDLLV+T AKLR++  A  VC +L + GFSL LI+FN L HVV+KS  NL VW+IY
Sbjct: 158  SPFVFDLLVQTCAKLRLIDFALCVCSHLEERGFSLSLISFNTLIHVVEKSDQNLKVWKIY 217

Query: 1418 EFMIQNRTYPNEVTIRTMVSALCKEGKLQRFVDVLDRVHGKRCPPMVIVNTSLIFRIVEE 1239
            E MI+ R YPN +T+R M+++LCKEGKLQ   D+L+R+HG RC   +IVN  LI+RI+EE
Sbjct: 218  EQMIRKRVYPNAITVRIMINSLCKEGKLQETSDMLNRIHGSRCSASLIVNACLIYRILEE 277

Query: 1238 GRIEEGMVLLKRMLQKNMIIDTVAFSLVVHAKAKLGNIDSAWEVYEEMLKRGFHENSFVY 1059
            GR+E+G+ LLKRMLQKNM++D +A+SL+V+AK K G+I S WEV+EEM +RGF  NSF+Y
Sbjct: 278  GRVEDGITLLKRMLQKNMVLDDIAYSLIVYAKVKTGSITSTWEVFEEMSERGFQANSFIY 337

Query: 1058 TSFIGAYCREGRIEEASCLIQEMEGKGLKPYGETYDTLIVGCAKGGKLEESLRFCEKMME 879
            T FIG +CR G++EEA CL+QEME  GLKPY ET++ LI GCA  G  EE L  CEKM+E
Sbjct: 338  TLFIGVHCRGGKVEEAHCLMQEMENMGLKPYPETFNLLIEGCAISGHSEEILSMCEKMLE 397

Query: 878  REIVPSCSAFNEMVANLCETDDLKLANGMLTVLLDKGFIPDEITYSHFIAGYGKVGEVQE 699
            R  +PSCS FN  +A +CE  D+K AN +LT+LLDKGF+PDE TY++ I GY K GE+QE
Sbjct: 398  RGFLPSCSVFNVAIAKICEKGDVKKANALLTILLDKGFLPDETTYTNLIIGYRKSGEIQE 457

Query: 698  VLKLYFEMEYRSLSPGNSVFTLLIGSLCQCGKLEEAEKYLKIMKDRSIAPSSCIYEALIA 519
            +LKLY+EM  R LSPG SVF  LIGSLCQ G+LEEAEKYLKI+KD S+ P   IY+ALI 
Sbjct: 458  ILKLYYEMGARLLSPGVSVFFALIGSLCQSGRLEEAEKYLKIVKDSSLTPCLSIYQALIL 517

Query: 518  SHYEKGDKKRALQLYKDMISDG 453
             + +KG++ +AL+LY +M+ DG
Sbjct: 518  FYLKKGNRAKALELYNEMMFDG 539


>ref|XP_007214531.1| hypothetical protein PRUPE_ppa014874mg, partial [Prunus persica]
            gi|462410396|gb|EMJ15730.1| hypothetical protein
            PRUPE_ppa014874mg, partial [Prunus persica]
          Length = 499

 Score =  604 bits (1557), Expect = e-170
 Identities = 310/514 (60%), Positives = 377/514 (73%), Gaps = 2/514 (0%)
 Frame = -2

Query: 2084 MSFFLSRIIPSLGSISVNNLRYLHVSHPQFAVAKVIHTGIIPKGDAVVSTLCDSLRRGCN 1905
            M+F+L RI  SL  I +N               ++I+T   PK   V   + DS R   N
Sbjct: 1    MAFWLRRISKSLIPIPINQ------------ETRLINTDSAPKD--VAKAIRDSFRSSWN 46

Query: 1904 WDTLTRKFDTVELSDSIVDKVLLELKEPTDAKRALGFFHWSAQRNKKFEHGVRSYCITIQ 1725
            WDTLT KF++V+L   +VD VLLELKEP DAKRALGFFHW+A R K FEHGV SY ITI 
Sbjct: 47   WDTLTTKFESVKLDGGLVDSVLLELKEPIDAKRALGFFHWAAHR-KSFEHGVWSYSITIH 105

Query: 1724 ILVRAGLLVDARALLESVLKKN--EGXXXXXXXXXXXSYKLTASDPFVFDLLVRTYAKLR 1551
            IL RA LL+DARALLESVLKK    G           SY++TAS+PFVFDLL++ YAKLR
Sbjct: 106  ILARARLLMDARALLESVLKKTAENGSKFSVVDSLLSSYEVTASNPFVFDLLLQAYAKLR 165

Query: 1550 MLHTAFDVCRYLIKHGFSLKLITFNILFHVVQKSSHNLFVWEIYEFMIQNRTYPNEVTIR 1371
            M  T FDVC YL +HG  L LIT+N L HVVQKS     VW+IYE M+  R YPNE TI+
Sbjct: 166  MFETGFDVCCYLGEHGLPLSLITYNTLLHVVQKSDQTALVWKIYEHMVGKRNYPNEETIK 225

Query: 1370 TMVSALCKEGKLQRFVDVLDRVHGKRCPPMVIVNTSLIFRIVEEGRIEEGMVLLKRMLQK 1191
             ++ ALCKEGKL++ VD+LDR+HGKRC P VIVNTSL+F I+E GR+EEG++LL+RMLQK
Sbjct: 226  ILIDALCKEGKLKKCVDMLDRIHGKRCSPSVIVNTSLVFSILEGGRVEEGLMLLRRMLQK 285

Query: 1190 NMIIDTVAFSLVVHAKAKLGNIDSAWEVYEEMLKRGFHENSFVYTSFIGAYCREGRIEEA 1011
            NM++DT+A+SL+V+AK KLG++ SAWEVYEEMLKRGF  NSFVYT F+GA+C EGR+EEA
Sbjct: 286  NMVLDTIAYSLIVYAKVKLGDVCSAWEVYEEMLKRGFRANSFVYTLFMGAHCEEGRMEEA 345

Query: 1010 SCLIQEMEGKGLKPYGETYDTLIVGCAKGGKLEESLRFCEKMMEREIVPSCSAFNEMVAN 831
              ++ EME   LKP+ E+Y+ LI GCAK G++E SL + +KM+E   +P  SAFNEMV  
Sbjct: 346  QGMMNEMENMDLKPFDESYNLLIEGCAKAGRVEASLSYLKKMVESGFIPCRSAFNEMVGK 405

Query: 830  LCETDDLKLANGMLTVLLDKGFIPDEITYSHFIAGYGKVGEVQEVLKLYFEMEYRSLSPG 651
            LCET D + AN M T+LLDKGF+PD  TY H I GYG+ GE+QEV+KLY+EME RSLSPG
Sbjct: 406  LCETGDAEQANTMFTILLDKGFLPDSTTYGHLIDGYGRKGEIQEVVKLYYEMESRSLSPG 465

Query: 650  NSVFTLLIGSLCQCGKLEEAEKYLKIMKDRSIAP 549
              VFT +I S CQCGK+EEAE+Y  IMKDRSIAP
Sbjct: 466  ALVFTSVIKSFCQCGKVEEAERYFGIMKDRSIAP 499



 Score =  102 bits (253), Expect = 1e-18
 Identities = 56/252 (22%), Positives = 118/252 (46%)
 Frame = -2

Query: 1181 IDTVAFSLVVHAKAKLGNIDSAWEVYEEMLKRGFHENSFVYTSFIGAYCREGRIEEASCL 1002
            +  + ++ ++H   K       W++YE M+ +  + N       I A C+EG++++   +
Sbjct: 184  LSLITYNTLLHVVQKSDQTALVWKIYEHMVGKRNYPNEETIKILIDALCKEGKLKKCVDM 243

Query: 1001 IQEMEGKGLKPYGETYDTLIVGCAKGGKLEESLRFCEKMMEREIVPSCSAFNEMVANLCE 822
            +  + GK   P      +L+    +GG++EE L    +M+++ +V    A++ +V    +
Sbjct: 244  LDRIHGKRCSPSVIVNTSLVFSILEGGRVEEGLMLLRRMLQKNMVLDTIAYSLIVYAKVK 303

Query: 821  TDDLKLANGMLTVLLDKGFIPDEITYSHFIAGYGKVGEVQEVLKLYFEMEYRSLSPGNSV 642
              D+  A  +   +L +GF  +   Y+ F+  + + G ++E   +  EME   L P +  
Sbjct: 304  LGDVCSAWEVYEEMLKRGFRANSFVYTLFMGAHCEEGRMEEAQGMMNEMENMDLKPFDES 363

Query: 641  FTLLIGSLCQCGKLEEAEKYLKIMKDRSIAPSSCIYEALIASHYEKGDKKRALQLYKDMI 462
            + LLI    + G++E +  YLK M +    P    +  ++    E GD ++A  ++  ++
Sbjct: 364  YNLLIEGCAKAGRVEASLSYLKKMVESGFIPCRSAFNEMVGKLCETGDAEQANTMFTILL 423

Query: 461  SDGLKPSWSNSG 426
              G  P  +  G
Sbjct: 424  DKGFLPDSTTYG 435


>ref|XP_004140361.1| PREDICTED: pentatricopeptide repeat-containing protein At1g66345,
            mitochondrial-like [Cucumis sativus]
          Length = 517

 Score =  603 bits (1554), Expect = e-169
 Identities = 297/502 (59%), Positives = 381/502 (75%), Gaps = 2/502 (0%)
 Frame = -2

Query: 1952 DAVVSTLCDSLRRGCNWDTLTRKFDTVELSDSIVDKVLLELKEPTDAKRALGFFHWSAQR 1773
            DA V+++CDSL R  +WDTL+RKF  +EL+D +V KVLL+ ++P DAKRALGFFHWSA+R
Sbjct: 17   DATVNSICDSLTRRQSWDTLSRKFQFLELNDFLVQKVLLKFQQPVDAKRALGFFHWSAKR 76

Query: 1772 NKKFEHGVRSYCITIQILVRAGLLVDARALLESVLKKNEGXXXXXXXXXXXS--YKLTAS 1599
             K F HG +S+ I I ILV+A L++DARALLES+LKKNEG              Y++T S
Sbjct: 77   -KNFNHGPQSFGIMIHILVKARLVLDARALLESILKKNEGNSFDYSVVDSLMDSYEVTGS 135

Query: 1598 DPFVFDLLVRTYAKLRMLHTAFDVCRYLIKHGFSLKLITFNILFHVVQKSSHNLFVWEIY 1419
             PFVFDLLV+T AKLR++  A  VC +L + GFSL LI+FN L HVV+KS  NL VW+IY
Sbjct: 136  SPFVFDLLVQTCAKLRLIDFALCVCSHLEERGFSLSLISFNTLIHVVEKSDENLKVWKIY 195

Query: 1418 EFMIQNRTYPNEVTIRTMVSALCKEGKLQRFVDVLDRVHGKRCPPMVIVNTSLIFRIVEE 1239
            E MI+ R YPN +T+R M+++LCKEGKLQ   D+L+R+HG RC   +IVN  LI+RI+EE
Sbjct: 196  EQMIRKRVYPNAITVRIMINSLCKEGKLQETSDMLNRIHGSRCSASLIVNACLIYRILEE 255

Query: 1238 GRIEEGMVLLKRMLQKNMIIDTVAFSLVVHAKAKLGNIDSAWEVYEEMLKRGFHENSFVY 1059
            GR+E+G+ LLKRMLQKNM++D +A+SL+V+AK K G+I S WEV+EEM +RGF  NSF+Y
Sbjct: 256  GRVEDGITLLKRMLQKNMVLDDIAYSLIVYAKVKTGSITSTWEVFEEMSERGFQANSFIY 315

Query: 1058 TSFIGAYCREGRIEEASCLIQEMEGKGLKPYGETYDTLIVGCAKGGKLEESLRFCEKMME 879
            T FIG +CR G++EEA CL+QEME  GLKPY ET++ LI GCA  G  EE L  CEKM+E
Sbjct: 316  TLFIGVHCRGGKVEEAHCLMQEMENMGLKPYPETFNLLIEGCAISGHSEEILSMCEKMLE 375

Query: 878  REIVPSCSAFNEMVANLCETDDLKLANGMLTVLLDKGFIPDEITYSHFIAGYGKVGEVQE 699
            R  +PSCS FN  +  +CE  D+K AN +LT+LLDKGF+PDE TY++ I GY K GE+QE
Sbjct: 376  RGFLPSCSVFNVAIDKICEKGDVKKANALLTILLDKGFLPDETTYTNLIIGYRKSGEIQE 435

Query: 698  VLKLYFEMEYRSLSPGNSVFTLLIGSLCQCGKLEEAEKYLKIMKDRSIAPSSCIYEALIA 519
            +LKLY+EM  R LSPG SVF  LIGSLCQ G+LEEAEKYLKI+KD S+ P   IY+ALI 
Sbjct: 436  ILKLYYEMGARLLSPGVSVFFALIGSLCQSGRLEEAEKYLKIVKDSSLTPCLSIYQALIL 495

Query: 518  SHYEKGDKKRALQLYKDMISDG 453
             + +KG++ +AL+LY +M+ DG
Sbjct: 496  LYLKKGNRAKALELYNEMMFDG 517


>ref|XP_007022703.1| Pentatricopeptide repeat (PPR) superfamily protein, putative isoform
            4 [Theobroma cacao] gi|508722331|gb|EOY14228.1|
            Pentatricopeptide repeat (PPR) superfamily protein,
            putative isoform 4 [Theobroma cacao]
          Length = 569

 Score =  602 bits (1551), Expect = e-169
 Identities = 304/548 (55%), Positives = 402/548 (73%), Gaps = 8/548 (1%)
 Frame = -2

Query: 2051 LGSISVNNLRYLHVSHPQFAVAK--VIHTGIIPK---GDAVVSTLCDSLRRGCNWDTLTR 1887
            LGS+ V+   +    +P FA+ K  +IH+  + +    D++V+++ DS ++  NW TLT+
Sbjct: 8    LGSLLVSTSIH---HNPCFALPKSIIIHSHSLSQLNNNDSIVNSISDSFKKTHNWGTLTK 64

Query: 1886 KFDTVELSDSIVDKVLLELKEPTDAKRALGFFHWSAQRNKKFEHGVRSYCITIQILVRAG 1707
             F +V+L+ S+V +VLL+LK+P  A+ AL FF+WSA +++ F+H + SYCI I ILV A 
Sbjct: 65   TFSSVQLTHSLVQQVLLQLKQPEHARSALNFFYWSA-KSQNFKHQIYSYCIAIHILVHAK 123

Query: 1706 LLVDARALLESVLKKN--EGXXXXXXXXXXXSYKLTASDPFVFDLLVRTYAKLRMLHTAF 1533
             L +A+ LL S LK +  +            SY +  S   VFDLLV+ YAKLRML  AF
Sbjct: 124  QLPEAKILLHSALKTSAPDSTRSCILESLLGSYNVVGSSTLVFDLLVQAYAKLRMLEDAF 183

Query: 1532 DVCRYLIKHGFSLKLITFNILFHVVQKSSHNLFVWEIYEFMIQNRTYPNEVTIRTMVSAL 1353
            +VC YL  HGFSL L++FN L H + KS  N+ VW++YE MI+ R YPNE+TIRTM+SAL
Sbjct: 184  EVCCYLENHGFSLTLLSFNALLHGILKSGENVMVWKVYEHMIEKRKYPNEITIRTMISAL 243

Query: 1352 CKEGKLQRFVDVLDRVHGKRCPPMVIVNTSLIFRIVEEGRIEEGMVLLKRMLQKNMIIDT 1173
            CKEGKLQ  VD+LD++ GKRC P+VIVNT L+F+++EEGRIE+GM LLKRMLQKN+I+D+
Sbjct: 244  CKEGKLQVVVDLLDKILGKRCSPIVIVNTHLVFKVIEEGRIEDGMELLKRMLQKNLILDS 303

Query: 1172 VAFSLVVHAKAKLGNIDSAWEVYEEMLKRGFHENSFVYTSFIGAYCREGRIEEASCLIQE 993
            +A+S VVH K KLGN++ AWEV+EEMLKRGF  NSF+++SFI AY   GRI EA  +++E
Sbjct: 304  IAYSFVVHTKLKLGNLELAWEVHEEMLKRGFIANSFLFSSFIRAYSESGRIHEAENVLRE 363

Query: 992  MEGKGLKPYGETYDTLIVGCAKGGKLEESLRFCEKMMEREIVPSCSAFNEMVANLCETDD 813
            ME  GLKPY ET++ LI GCAK G+++ S+R CE+M+ R +VPSCS FNEMV  LCE  D
Sbjct: 364  MENMGLKPYDETFNYLIEGCAKAGEMKASVRHCEEMIRRGLVPSCSTFNEMVRGLCEIGD 423

Query: 812  LKLANGMLTVLLDKGFIPDEITYSHFIAGYGKVGEVQEVLKLYFEMEYRSLSPGNSVFTL 633
             + AN +LT++LDKGF+P+E TYSH IAGYGK G +Q+V KLY+EMEY+SLSPG  VFT 
Sbjct: 424  SENANALLTLVLDKGFLPNETTYSHLIAGYGKEGNIQQVFKLYYEMEYKSLSPGLPVFTS 483

Query: 632  LIGSLCQCGKLEEAEKYLKIMKDRSIAPSSCIYEALIASHYEKGDKKRALQLYKDMISDG 453
            LI  LC CGKLEEAE+YL+IMKDRS+  S  IYEALI  H+EKGDK  A  +Y +M++ G
Sbjct: 484  LIRCLCHCGKLEEAERYLRIMKDRSVVLSEDIYEALITGHFEKGDKTGAGIIYNEMVARG 543

Query: 452  LKP-SWSN 432
            +KP  W N
Sbjct: 544  MKPHKWGN 551


>ref|XP_007022702.1| Pentatricopeptide repeat (PPR) superfamily protein, putative isoform
            3 [Theobroma cacao] gi|508722330|gb|EOY14227.1|
            Pentatricopeptide repeat (PPR) superfamily protein,
            putative isoform 3 [Theobroma cacao]
          Length = 563

 Score =  602 bits (1551), Expect = e-169
 Identities = 304/548 (55%), Positives = 402/548 (73%), Gaps = 8/548 (1%)
 Frame = -2

Query: 2051 LGSISVNNLRYLHVSHPQFAVAK--VIHTGIIPK---GDAVVSTLCDSLRRGCNWDTLTR 1887
            LGS+ V+   +    +P FA+ K  +IH+  + +    D++V+++ DS ++  NW TLT+
Sbjct: 8    LGSLLVSTSIH---HNPCFALPKSIIIHSHSLSQLNNNDSIVNSISDSFKKTHNWGTLTK 64

Query: 1886 KFDTVELSDSIVDKVLLELKEPTDAKRALGFFHWSAQRNKKFEHGVRSYCITIQILVRAG 1707
             F +V+L+ S+V +VLL+LK+P  A+ AL FF+WSA +++ F+H + SYCI I ILV A 
Sbjct: 65   TFSSVQLTHSLVQQVLLQLKQPEHARSALNFFYWSA-KSQNFKHQIYSYCIAIHILVHAK 123

Query: 1706 LLVDARALLESVLKKN--EGXXXXXXXXXXXSYKLTASDPFVFDLLVRTYAKLRMLHTAF 1533
             L +A+ LL S LK +  +            SY +  S   VFDLLV+ YAKLRML  AF
Sbjct: 124  QLPEAKILLHSALKTSAPDSTRSCILESLLGSYNVVGSSTLVFDLLVQAYAKLRMLEDAF 183

Query: 1532 DVCRYLIKHGFSLKLITFNILFHVVQKSSHNLFVWEIYEFMIQNRTYPNEVTIRTMVSAL 1353
            +VC YL  HGFSL L++FN L H + KS  N+ VW++YE MI+ R YPNE+TIRTM+SAL
Sbjct: 184  EVCCYLENHGFSLTLLSFNALLHGILKSGENVMVWKVYEHMIEKRKYPNEITIRTMISAL 243

Query: 1352 CKEGKLQRFVDVLDRVHGKRCPPMVIVNTSLIFRIVEEGRIEEGMVLLKRMLQKNMIIDT 1173
            CKEGKLQ  VD+LD++ GKRC P+VIVNT L+F+++EEGRIE+GM LLKRMLQKN+I+D+
Sbjct: 244  CKEGKLQVVVDLLDKILGKRCSPIVIVNTHLVFKVIEEGRIEDGMELLKRMLQKNLILDS 303

Query: 1172 VAFSLVVHAKAKLGNIDSAWEVYEEMLKRGFHENSFVYTSFIGAYCREGRIEEASCLIQE 993
            +A+S VVH K KLGN++ AWEV+EEMLKRGF  NSF+++SFI AY   GRI EA  +++E
Sbjct: 304  IAYSFVVHTKLKLGNLELAWEVHEEMLKRGFIANSFLFSSFIRAYSESGRIHEAENVLRE 363

Query: 992  MEGKGLKPYGETYDTLIVGCAKGGKLEESLRFCEKMMEREIVPSCSAFNEMVANLCETDD 813
            ME  GLKPY ET++ LI GCAK G+++ S+R CE+M+ R +VPSCS FNEMV  LCE  D
Sbjct: 364  MENMGLKPYDETFNYLIEGCAKAGEMKASVRHCEEMIRRGLVPSCSTFNEMVRGLCEIGD 423

Query: 812  LKLANGMLTVLLDKGFIPDEITYSHFIAGYGKVGEVQEVLKLYFEMEYRSLSPGNSVFTL 633
             + AN +LT++LDKGF+P+E TYSH IAGYGK G +Q+V KLY+EMEY+SLSPG  VFT 
Sbjct: 424  SENANALLTLVLDKGFLPNETTYSHLIAGYGKEGNIQQVFKLYYEMEYKSLSPGLPVFTS 483

Query: 632  LIGSLCQCGKLEEAEKYLKIMKDRSIAPSSCIYEALIASHYEKGDKKRALQLYKDMISDG 453
            LI  LC CGKLEEAE+YL+IMKDRS+  S  IYEALI  H+EKGDK  A  +Y +M++ G
Sbjct: 484  LIRCLCHCGKLEEAERYLRIMKDRSVVLSEDIYEALITGHFEKGDKTGAGIIYNEMVARG 543

Query: 452  LKP-SWSN 432
            +KP  W N
Sbjct: 544  MKPHKWGN 551


>ref|XP_007022700.1| Pentatricopeptide repeat superfamily protein, putative isoform 1
            [Theobroma cacao] gi|508722328|gb|EOY14225.1|
            Pentatricopeptide repeat superfamily protein, putative
            isoform 1 [Theobroma cacao]
          Length = 596

 Score =  602 bits (1551), Expect = e-169
 Identities = 304/548 (55%), Positives = 402/548 (73%), Gaps = 8/548 (1%)
 Frame = -2

Query: 2051 LGSISVNNLRYLHVSHPQFAVAK--VIHTGIIPK---GDAVVSTLCDSLRRGCNWDTLTR 1887
            LGS+ V+   +    +P FA+ K  +IH+  + +    D++V+++ DS ++  NW TLT+
Sbjct: 8    LGSLLVSTSIH---HNPCFALPKSIIIHSHSLSQLNNNDSIVNSISDSFKKTHNWGTLTK 64

Query: 1886 KFDTVELSDSIVDKVLLELKEPTDAKRALGFFHWSAQRNKKFEHGVRSYCITIQILVRAG 1707
             F +V+L+ S+V +VLL+LK+P  A+ AL FF+WSA +++ F+H + SYCI I ILV A 
Sbjct: 65   TFSSVQLTHSLVQQVLLQLKQPEHARSALNFFYWSA-KSQNFKHQIYSYCIAIHILVHAK 123

Query: 1706 LLVDARALLESVLKKN--EGXXXXXXXXXXXSYKLTASDPFVFDLLVRTYAKLRMLHTAF 1533
             L +A+ LL S LK +  +            SY +  S   VFDLLV+ YAKLRML  AF
Sbjct: 124  QLPEAKILLHSALKTSAPDSTRSCILESLLGSYNVVGSSTLVFDLLVQAYAKLRMLEDAF 183

Query: 1532 DVCRYLIKHGFSLKLITFNILFHVVQKSSHNLFVWEIYEFMIQNRTYPNEVTIRTMVSAL 1353
            +VC YL  HGFSL L++FN L H + KS  N+ VW++YE MI+ R YPNE+TIRTM+SAL
Sbjct: 184  EVCCYLENHGFSLTLLSFNALLHGILKSGENVMVWKVYEHMIEKRKYPNEITIRTMISAL 243

Query: 1352 CKEGKLQRFVDVLDRVHGKRCPPMVIVNTSLIFRIVEEGRIEEGMVLLKRMLQKNMIIDT 1173
            CKEGKLQ  VD+LD++ GKRC P+VIVNT L+F+++EEGRIE+GM LLKRMLQKN+I+D+
Sbjct: 244  CKEGKLQVVVDLLDKILGKRCSPIVIVNTHLVFKVIEEGRIEDGMELLKRMLQKNLILDS 303

Query: 1172 VAFSLVVHAKAKLGNIDSAWEVYEEMLKRGFHENSFVYTSFIGAYCREGRIEEASCLIQE 993
            +A+S VVH K KLGN++ AWEV+EEMLKRGF  NSF+++SFI AY   GRI EA  +++E
Sbjct: 304  IAYSFVVHTKLKLGNLELAWEVHEEMLKRGFIANSFLFSSFIRAYSESGRIHEAENVLRE 363

Query: 992  MEGKGLKPYGETYDTLIVGCAKGGKLEESLRFCEKMMEREIVPSCSAFNEMVANLCETDD 813
            ME  GLKPY ET++ LI GCAK G+++ S+R CE+M+ R +VPSCS FNEMV  LCE  D
Sbjct: 364  MENMGLKPYDETFNYLIEGCAKAGEMKASVRHCEEMIRRGLVPSCSTFNEMVRGLCEIGD 423

Query: 812  LKLANGMLTVLLDKGFIPDEITYSHFIAGYGKVGEVQEVLKLYFEMEYRSLSPGNSVFTL 633
             + AN +LT++LDKGF+P+E TYSH IAGYGK G +Q+V KLY+EMEY+SLSPG  VFT 
Sbjct: 424  SENANALLTLVLDKGFLPNETTYSHLIAGYGKEGNIQQVFKLYYEMEYKSLSPGLPVFTS 483

Query: 632  LIGSLCQCGKLEEAEKYLKIMKDRSIAPSSCIYEALIASHYEKGDKKRALQLYKDMISDG 453
            LI  LC CGKLEEAE+YL+IMKDRS+  S  IYEALI  H+EKGDK  A  +Y +M++ G
Sbjct: 484  LIRCLCHCGKLEEAERYLRIMKDRSVVLSEDIYEALITGHFEKGDKTGAGIIYNEMVARG 543

Query: 452  LKP-SWSN 432
            +KP  W N
Sbjct: 544  MKPHKWGN 551


>ref|XP_006430611.1| hypothetical protein CICLE_v10011485mg [Citrus clementina]
            gi|557532668|gb|ESR43851.1| hypothetical protein
            CICLE_v10011485mg [Citrus clementina]
          Length = 521

 Score =  599 bits (1544), Expect = e-168
 Identities = 304/519 (58%), Positives = 381/519 (73%), Gaps = 2/519 (0%)
 Frame = -2

Query: 1985 KVIHTGIIPKGDAVVSTLCDSLRRGCNWDTLTRKFDTVELSDSIVDKVLLELKEPTDAKR 1806
            K IH+   PK +++V+ +CD  RRG NWDTL+++F+++ L+DS+V+ VLLELKEP DAKR
Sbjct: 26   KFIHSTRKPKSNSLVTAICDCFRRGWNWDTLSKQFNSIHLNDSLVENVLLELKEPVDAKR 85

Query: 1805 ALGFFHWSAQRNKKFEHGVRSYCITIQILVRAGLLVDARALLESVLKKNEGXXXXXXXXX 1626
            ALGFFHWSA  +K ++H + SY +TI ILVRA LLVDARAL+ESVL+K+ G         
Sbjct: 86   ALGFFHWSAH-HKSYQHNLCSYSVTIHILVRARLLVDARALIESVLEKHIGDDSRFSVVD 144

Query: 1625 XXS--YKLTASDPFVFDLLVRTYAKLRMLHTAFDVCRYLIKHGFSLKLITFNILFHVVQK 1452
                 Y +  S P VFDLLV+TY+K+R+   AFDVCRYL + GFSL LI+FN L HVV K
Sbjct: 145  SLLDTYNVADSIPLVFDLLVQTYSKMRLFEVAFDVCRYLEQRGFSLSLISFNTLIHVVTK 204

Query: 1451 SSHNLFVWEIYEFMIQNRTYPNEVTIRTMVSALCKEGKLQRFVDVLDRVHGKRCPPMVIV 1272
            S  N                                  LQ +VD+LDR+HGKRC PMVIV
Sbjct: 205  SDRN--------------------------------DLLQTYVDMLDRIHGKRCSPMVIV 232

Query: 1271 NTSLIFRIVEEGRIEEGMVLLKRMLQKNMIIDTVAFSLVVHAKAKLGNIDSAWEVYEEML 1092
            NTSLI RI++E RIEEGMVLLKRML+KNMI DT+A+SL+V+AK K+ N++SA  VYEEML
Sbjct: 233  NTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAYSLIVYAKVKMRNLESALVVYEEML 292

Query: 1091 KRGFHENSFVYTSFIGAYCREGRIEEASCLIQEMEGKGLKPYGETYDTLIVGCAKGGKLE 912
            KRGF  NSFVYT+FIGAYC  G+IEEA+CL+QEME  GLKPY ET++ LI GCAK  ++E
Sbjct: 293  KRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMENAGLKPYDETFNLLIEGCAKAKRIE 352

Query: 911  ESLRFCEKMMEREIVPSCSAFNEMVANLCETDDLKLANGMLTVLLDKGFIPDEITYSHFI 732
            ESL +CE+MM R+++PSCSAFNEM+  LCE  ++K ANGMLT+ LDKGF P+E+TYSH I
Sbjct: 353  ESLSYCEQMMSRKLLPSCSAFNEMIRRLCECGNVKQANGMLTLALDKGFSPNEMTYSHLI 412

Query: 731  AGYGKVGEVQEVLKLYFEMEYRSLSPGNSVFTLLIGSLCQCGKLEEAEKYLKIMKDRSIA 552
             GY K GE+QEVLKLY+EMEY+S+SP    +T LI SLCQCGKLEEA+KY KIMK  S+ 
Sbjct: 413  GGYAKEGEIQEVLKLYYEMEYKSISPTLPAYTSLISSLCQCGKLEEADKYFKIMKSHSLV 472

Query: 551  PSSCIYEALIASHYEKGDKKRALQLYKDMISDGLKPSWS 435
            P   IYE+L+  H EKG+K +AL L ++M+S+GLKPS S
Sbjct: 473  PGVDIYESLVGIHLEKGNKVKALHLCEEMVSEGLKPSTS 511


>ref|XP_004301459.1| PREDICTED: pentatricopeptide repeat-containing protein At1g66345,
            mitochondrial-like [Fragaria vesca subsp. vesca]
          Length = 530

 Score =  598 bits (1542), Expect = e-168
 Identities = 307/535 (57%), Positives = 385/535 (71%), Gaps = 2/535 (0%)
 Frame = -2

Query: 2084 MSFFLSRIIPSLGSISVNNLRYLHVSHPQFAVAKVIHTGIIPKGDAVVSTLCDSLRRGCN 1905
            M   L RI  SL S+  N               ++IHT   P    VV  +CDS + G +
Sbjct: 1    MGSLLRRITHSLNSLKPNT--------------QLIHTNSTPNN--VVRAICDSFKSGWS 44

Query: 1904 WDTLTRKFDTVELSDSIVDKVLLELKEPTDAKRALGFFHWSAQRNKKFEHGVRSYCITIQ 1725
            WD LT KF  V+L   +V+ VLLELK+P DAKRALGFFHW ++R K F+HGV SY ITI 
Sbjct: 45   WDALTSKFACVKLDAKLVENVLLELKDPNDAKRALGFFHWVSKR-KDFDHGVWSYSITIH 103

Query: 1724 ILVRAGLLVDARALLESVLKKNEGXXXXXXXXXXXS--YKLTASDPFVFDLLVRTYAKLR 1551
            ILVRA + +DARAL+ESVLKKN G              Y++TAS+PFVFDLLV+TYAK+R
Sbjct: 104  ILVRAKMAMDARALMESVLKKNVGDSLKFSVVDSLLSSYEVTASNPFVFDLLVQTYAKMR 163

Query: 1550 MLHTAFDVCRYLIKHGFSLKLITFNILFHVVQKSSHNLFVWEIYEFMIQNRTYPNEVTIR 1371
            M  T FDVC YL + G  L LI++N L  VV++S  N  VW+IYE M+  R+YPNE T+R
Sbjct: 164  MFETGFDVCCYLRERGLPLSLISYNTLLRVVERSERNALVWKIYEHMVGRRSYPNEETVR 223

Query: 1370 TMVSALCKEGKLQRFVDVLDRVHGKRCPPMVIVNTSLIFRIVEEGRIEEGMVLLKRMLQK 1191
             ++ ALCKEG+L+++ D+LDR+HGKRC P VIVNTSL+FRI+EEGR+EEGMVLLKRMLQK
Sbjct: 224  ILIDALCKEGELRKYADMLDRIHGKRCSPSVIVNTSLVFRILEEGRVEEGMVLLKRMLQK 283

Query: 1190 NMIIDTVAFSLVVHAKAKLGNIDSAWEVYEEMLKRGFHENSFVYTSFIGAYCREGRIEEA 1011
            NM++DT+A+SL+V+AK KL ++ SA +VYEEMLKRGF  NSFVYT FI A+C+ GRI+EA
Sbjct: 284  NMVLDTIAYSLIVYAKVKLEDLGSAQQVYEEMLKRGFRANSFVYTLFIEAHCKAGRIDEA 343

Query: 1010 SCLIQEMEGKGLKPYGETYDTLIVGCAKGGKLEESLRFCEKMMEREIVPSCSAFNEMVAN 831
              ++ EM    LKPY E+Y+ LI GCAK G++EES+ + ++MME   +PS  AFNEMV  
Sbjct: 344  QSMMNEMGNMDLKPYDESYNFLIEGCAKAGRVEESVNYMKQMMEIRFIPSLGAFNEMVGK 403

Query: 830  LCETDDLKLANGMLTVLLDKGFIPDEITYSHFIAGYGKVGEVQEVLKLYFEMEYRSLSPG 651
            LCE  D   AN MLT+LLDKGF P+EITYS  I GY + G+  EVLKL++EME RSLSPG
Sbjct: 404  LCEIGDADQANVMLTILLDKGFSPNEITYSLLIDGYARKGKSDEVLKLFYEMESRSLSPG 463

Query: 650  NSVFTLLIGSLCQCGKLEEAEKYLKIMKDRSIAPSSCIYEALIASHYEKGDKKRA 486
              VFT LI S CQCGK EEA+KY +IMKDRSIAPS   YE  +A+H+E+G+ +RA
Sbjct: 464  MLVFTSLIKSFCQCGKSEEAKKYFRIMKDRSIAPSISTYEIFLANHFEQGNTERA 518



 Score = 97.4 bits (241), Expect = 2e-17
 Identities = 56/263 (21%), Positives = 121/263 (46%)
 Frame = -2

Query: 1229 EEGMVLLKRMLQKNMIIDTVAFSLVVHAKAKLGNIDSAWEVYEEMLKRGFHENSFVYTSF 1050
            E G  +   + ++ + +  ++++ ++    +       W++YE M+ R  + N       
Sbjct: 166  ETGFDVCCYLRERGLPLSLISYNTLLRVVERSERNALVWKIYEHMVGRRSYPNEETVRIL 225

Query: 1049 IGAYCREGRIEEASCLIQEMEGKGLKPYGETYDTLIVGCAKGGKLEESLRFCEKMMEREI 870
            I A C+EG + + + ++  + GK   P      +L+    + G++EE +   ++M+++ +
Sbjct: 226  IDALCKEGELRKYADMLDRIHGKRCSPSVIVNTSLVFRILEEGRVEEGMVLLKRMLQKNM 285

Query: 869  VPSCSAFNEMVANLCETDDLKLANGMLTVLLDKGFIPDEITYSHFIAGYGKVGEVQEVLK 690
            V    A++ +V    + +DL  A  +   +L +GF  +   Y+ FI  + K G + E   
Sbjct: 286  VLDTIAYSLIVYAKVKLEDLGSAQQVYEEMLKRGFRANSFVYTLFIEAHCKAGRIDEAQS 345

Query: 689  LYFEMEYRSLSPGNSVFTLLIGSLCQCGKLEEAEKYLKIMKDRSIAPSSCIYEALIASHY 510
            +  EM    L P +  +  LI    + G++EE+  Y+K M +    PS   +  ++    
Sbjct: 346  MMNEMGNMDLKPYDESYNFLIEGCAKAGRVEESVNYMKQMMEIRFIPSLGAFNEMVGKLC 405

Query: 509  EKGDKKRALQLYKDMISDGLKPS 441
            E GD  +A  +   ++  G  P+
Sbjct: 406  EIGDADQANVMLTILLDKGFSPN 428



 Score = 92.0 bits (227), Expect = 1e-15
 Identities = 59/240 (24%), Positives = 110/240 (45%)
 Frame = -2

Query: 1517 LIKHGFSLKLITFNILFHVVQKSSHNLFVWEIYEFMIQNRTYPNEVTIRTMVSALCKEGK 1338
            +++    L  I ++++ +   K        ++YE M++     N       + A CK G+
Sbjct: 280  MLQKNMVLDTIAYSLIVYAKVKLEDLGSAQQVYEEMLKRGFRANSFVYTLFIEAHCKAGR 339

Query: 1337 LQRFVDVLDRVHGKRCPPMVIVNTSLIFRIVEEGRIEEGMVLLKRMLQKNMIIDTVAFSL 1158
            +     +++ +      P       LI    + GR+EE +  +K+M++   I    AF+ 
Sbjct: 340  IDEAQSMMNEMGNMDLKPYDESYNFLIEGCAKAGRVEESVNYMKQMMEIRFIPSLGAFNE 399

Query: 1157 VVHAKAKLGNIDSAWEVYEEMLKRGFHENSFVYTSFIGAYCREGRIEEASCLIQEMEGKG 978
            +V    ++G+ D A  +   +L +GF  N   Y+  I  Y R+G+ +E   L  EME + 
Sbjct: 400  MVGKLCEIGDADQANVMLTILLDKGFSPNEITYSLLIDGYARKGKSDEVLKLFYEMESRS 459

Query: 977  LKPYGETYDTLIVGCAKGGKLEESLRFCEKMMEREIVPSCSAFNEMVANLCETDDLKLAN 798
            L P    + +LI    + GK EE+ ++   M +R I PS S +   +AN  E  + + A+
Sbjct: 460  LSPGMLVFTSLIKSFCQCGKSEEAKKYFRIMKDRSIAPSISTYEIFLANHFEQGNTERAD 519


>gb|EXB56945.1| hypothetical protein L484_019990 [Morus notabilis]
          Length = 829

 Score =  576 bits (1485), Expect = e-161
 Identities = 292/510 (57%), Positives = 380/510 (74%), Gaps = 3/510 (0%)
 Frame = -2

Query: 2105 ITNHDIVMSFFLSRIIPSLGSISVNNLRYLHVSHPQFAVAKVIHTGIIPKG-DAVVSTLC 1929
            +  HD  MS  L +I+PSL   S+ +   L   +P+   + +IHT   P   + VV  +C
Sbjct: 160  LLQHDADMSL-LRQIVPSLIFKSLKSPWQLCCFNPRSEPSHLIHTVTKPIAPNNVVKAIC 218

Query: 1928 DSLRRGCNWDTLTRKFDTVELSDSIVDKVLLELKEPTDAKRALGFFHWSAQRNKKFEHGV 1749
            ++ R G  WDTL+R+F  +E ++ +++K+LLELK+P DAK ALGFFHW+A R   F+H +
Sbjct: 219  NAFRSGWTWDTLSREFHHIEFNEQLIEKILLELKQPIDAKWALGFFHWAAHR-VNFQHCL 277

Query: 1748 RSYCITIQILVRAGLLVDARALLESVLKKNEGXXXXXXXXXXXS--YKLTASDPFVFDLL 1575
            RSYC+ I ILVRA L +DARAL+E+VLKKN G              YK+T S PFVFDLL
Sbjct: 278  RSYCLAIHILVRARLNLDARALIETVLKKNAGDSSKFLVVDSLLSCYKITDSTPFVFDLL 337

Query: 1574 VRTYAKLRMLHTAFDVCRYLIKHGFSLKLITFNILFHVVQKSSHNLFVWEIYEFMIQNRT 1395
            V++Y++LRM  + FDVC YL +HGFSL L++FN   HVV+KS  N  VW IYE MI  R 
Sbjct: 338  VQSYSRLRMFDSGFDVCCYLEEHGFSLNLVSFNTFIHVVEKSDENTMVWRIYEHMIWRRI 397

Query: 1394 YPNEVTIRTMVSALCKEGKLQRFVDVLDRVHGKRCPPMVIVNTSLIFRIVEEGRIEEGMV 1215
            YPN+ TIRT++S+LCKEGKLQ++V++LDR+HG+RC P VIVNTSL+F+I EEGR+EEG+V
Sbjct: 398  YPNQSTIRTLISSLCKEGKLQKYVEMLDRIHGRRCSPSVIVNTSLVFKIFEEGRVEEGVV 457

Query: 1214 LLKRMLQKNMIIDTVAFSLVVHAKAKLGNIDSAWEVYEEMLKRGFHENSFVYTSFIGAYC 1035
            LLKRMLQ+NM+ DT+A+SL+V+AK KLGNI SA +VYEEMLKRGF  N FVYT FI AYC
Sbjct: 458  LLKRMLQRNMLFDTIAYSLIVYAKLKLGNIVSAQDVYEEMLKRGFRANPFVYTLFIRAYC 517

Query: 1034 REGRIEEASCLIQEMEGKGLKPYGETYDTLIVGCAKGGKLEESLRFCEKMMEREIVPSCS 855
            +EGRI+E  C++++ME  GLKPY ETY++L+   AK G+LEESLR CE MME+  VPSC+
Sbjct: 518  KEGRIDETHCMMKDMEDMGLKPYEETYNSLVECYAKAGRLEESLRNCEVMMEKGFVPSCA 577

Query: 854  AFNEMVANLCETDDLKLANGMLTVLLDKGFIPDEITYSHFIAGYGKVGEVQEVLKLYFEM 675
            AFNEMV  LCE  + + AN MLT LL+KGF P++ITY+  I GY K G+V+EVLKL++EM
Sbjct: 578  AFNEMVHKLCENGEAEKANAMLTRLLEKGFSPNDITYASLIVGYEKKGDVEEVLKLFYEM 637

Query: 674  EYRSLSPGNSVFTLLIGSLCQCGKLEEAEK 585
              +S+SPG+ VFT LI SLC+ GKLE+AEK
Sbjct: 638  VSKSISPGSLVFTTLIKSLCRSGKLEQAEK 667


>ref|XP_007022701.1| Pentatricopeptide repeat superfamily protein, putative isoform 2
            [Theobroma cacao] gi|508722329|gb|EOY14226.1|
            Pentatricopeptide repeat superfamily protein, putative
            isoform 2 [Theobroma cacao]
          Length = 549

 Score =  546 bits (1408), Expect = e-152
 Identities = 276/499 (55%), Positives = 366/499 (73%), Gaps = 7/499 (1%)
 Frame = -2

Query: 2051 LGSISVNNLRYLHVSHPQFAVAK--VIHTGIIPK---GDAVVSTLCDSLRRGCNWDTLTR 1887
            LGS+ V+   +    +P FA+ K  +IH+  + +    D++V+++ DS ++  NW TLT+
Sbjct: 8    LGSLLVSTSIH---HNPCFALPKSIIIHSHSLSQLNNNDSIVNSISDSFKKTHNWGTLTK 64

Query: 1886 KFDTVELSDSIVDKVLLELKEPTDAKRALGFFHWSAQRNKKFEHGVRSYCITIQILVRAG 1707
             F +V+L+ S+V +VLL+LK+P  A+ AL FF+WSA +++ F+H + SYCI I ILV A 
Sbjct: 65   TFSSVQLTHSLVQQVLLQLKQPEHARSALNFFYWSA-KSQNFKHQIYSYCIAIHILVHAK 123

Query: 1706 LLVDARALLESVLKKN--EGXXXXXXXXXXXSYKLTASDPFVFDLLVRTYAKLRMLHTAF 1533
             L +A+ LL S LK +  +            SY +  S   VFDLLV+ YAKLRML  AF
Sbjct: 124  QLPEAKILLHSALKTSAPDSTRSCILESLLGSYNVVGSSTLVFDLLVQAYAKLRMLEDAF 183

Query: 1532 DVCRYLIKHGFSLKLITFNILFHVVQKSSHNLFVWEIYEFMIQNRTYPNEVTIRTMVSAL 1353
            +VC YL  HGFSL L++FN L H + KS  N+ VW++YE MI+ R YPNE+TIRTM+SAL
Sbjct: 184  EVCCYLENHGFSLTLLSFNALLHGILKSGENVMVWKVYEHMIEKRKYPNEITIRTMISAL 243

Query: 1352 CKEGKLQRFVDVLDRVHGKRCPPMVIVNTSLIFRIVEEGRIEEGMVLLKRMLQKNMIIDT 1173
            CKEGKLQ  VD+LD++ GKRC P+VIVNT L+F+++EEGRIE+GM LLKRMLQKN+I+D+
Sbjct: 244  CKEGKLQVVVDLLDKILGKRCSPIVIVNTHLVFKVIEEGRIEDGMELLKRMLQKNLILDS 303

Query: 1172 VAFSLVVHAKAKLGNIDSAWEVYEEMLKRGFHENSFVYTSFIGAYCREGRIEEASCLIQE 993
            +A+S VVH K KLGN++ AWEV+EEMLKRGF  NSF+++SFI AY   GRI EA  +++E
Sbjct: 304  IAYSFVVHTKLKLGNLELAWEVHEEMLKRGFIANSFLFSSFIRAYSESGRIHEAENVLRE 363

Query: 992  MEGKGLKPYGETYDTLIVGCAKGGKLEESLRFCEKMMEREIVPSCSAFNEMVANLCETDD 813
            ME  GLKPY ET++ LI GCAK G+++ S+R CE+M+ R +VPSCS FNEMV  LCE  D
Sbjct: 364  MENMGLKPYDETFNYLIEGCAKAGEMKASVRHCEEMIRRGLVPSCSTFNEMVRGLCEIGD 423

Query: 812  LKLANGMLTVLLDKGFIPDEITYSHFIAGYGKVGEVQEVLKLYFEMEYRSLSPGNSVFTL 633
             + AN +LT++LDKGF+P+E TYSH IAGYGK G +Q+V KLY+EMEY+SLSPG  VFT 
Sbjct: 424  SENANALLTLVLDKGFLPNETTYSHLIAGYGKEGNIQQVFKLYYEMEYKSLSPGLPVFTS 483

Query: 632  LIGSLCQCGKLEEAEKYLK 576
            LI  LC CGKLEEAE+  K
Sbjct: 484  LIRCLCHCGKLEEAERVTK 502



 Score =  107 bits (267), Expect = 2e-20
 Identities = 62/285 (21%), Positives = 137/285 (48%), Gaps = 5/285 (1%)
 Frame = -2

Query: 1280 VIVNTSLIFRIVEEG-----RIEEGMVLLKRMLQKNMIIDTVAFSLVVHAKAKLGNIDSA 1116
            V+ +++L+F ++ +       +E+   +   +      +  ++F+ ++H   K G     
Sbjct: 158  VVGSSTLVFDLLVQAYAKLRMLEDAFEVCCYLENHGFSLTLLSFNALLHGILKSGENVMV 217

Query: 1115 WEVYEEMLKRGFHENSFVYTSFIGAYCREGRIEEASCLIQEMEGKGLKPYGETYDTLIVG 936
            W+VYE M+++  + N     + I A C+EG+++    L+ ++ GK   P       L+  
Sbjct: 218  WKVYEHMIEKRKYPNEITIRTMISALCKEGKLQVVVDLLDKILGKRCSPIVIVNTHLVFK 277

Query: 935  CAKGGKLEESLRFCEKMMEREIVPSCSAFNEMVANLCETDDLKLANGMLTVLLDKGFIPD 756
              + G++E+ +   ++M+++ ++    A++ +V    +  +L+LA  +   +L +GFI +
Sbjct: 278  VIEEGRIEDGMELLKRMLQKNLILDSIAYSFVVHTKLKLGNLELAWEVHEEMLKRGFIAN 337

Query: 755  EITYSHFIAGYGKVGEVQEVLKLYFEMEYRSLSPGNSVFTLLIGSLCQCGKLEEAEKYLK 576
               +S FI  Y + G + E   +  EME   L P +  F  LI    + G+++ + ++ +
Sbjct: 338  SFLFSSFIRAYSESGRIHEAENVLREMENMGLKPYDETFNYLIEGCAKAGEMKASVRHCE 397

Query: 575  IMKDRSIAPSSCIYEALIASHYEKGDKKRALQLYKDMISDGLKPS 441
             M  R + PS   +  ++    E GD + A  L   ++  G  P+
Sbjct: 398  EMIRRGLVPSCSTFNEMVRGLCEIGDSENANALLTLVLDKGFLPN 442



 Score = 75.1 bits (183), Expect = 1e-10
 Identities = 48/225 (21%), Positives = 101/225 (44%)
 Frame = -2

Query: 1547 LHTAFDVCRYLIKHGFSLKLITFNILFHVVQKSSHNLFVWEIYEFMIQNRTYPNEVTIRT 1368
            +    ++ + +++    L  I ++ + H   K  +    WE++E M++     N     +
Sbjct: 284  IEDGMELLKRMLQKNLILDSIAYSFVVHTKLKLGNLELAWEVHEEMLKRGFIANSFLFSS 343

Query: 1367 MVSALCKEGKLQRFVDVLDRVHGKRCPPMVIVNTSLIFRIVEEGRIEEGMVLLKRMLQKN 1188
             + A  + G++    +VL  +      P       LI    + G ++  +   + M+++ 
Sbjct: 344  FIRAYSESGRIHEAENVLREMENMGLKPYDETFNYLIEGCAKAGEMKASVRHCEEMIRRG 403

Query: 1187 MIIDTVAFSLVVHAKAKLGNIDSAWEVYEEMLKRGFHENSFVYTSFIGAYCREGRIEEAS 1008
            ++     F+ +V    ++G+ ++A  +   +L +GF  N   Y+  I  Y +EG I++  
Sbjct: 404  LVPSCSTFNEMVRGLCEIGDSENANALLTLVLDKGFLPNETTYSHLIAGYGKEGNIQQVF 463

Query: 1007 CLIQEMEGKGLKPYGETYDTLIVGCAKGGKLEESLRFCEKMMERE 873
             L  EME K L P    + +LI      GKLEE+ R  ++ + R+
Sbjct: 464  KLYYEMEYKSLSPGLPVFTSLIRCLCHCGKLEEAERVTKQGLVRD 508


>ref|XP_007022704.1| Pentatricopeptide repeat (PPR) superfamily protein, putative isoform
            5 [Theobroma cacao] gi|508722332|gb|EOY14229.1|
            Pentatricopeptide repeat (PPR) superfamily protein,
            putative isoform 5 [Theobroma cacao]
          Length = 504

 Score =  546 bits (1407), Expect = e-152
 Identities = 275/499 (55%), Positives = 367/499 (73%), Gaps = 7/499 (1%)
 Frame = -2

Query: 2051 LGSISVNNLRYLHVSHPQFAVAK--VIHTGIIPK---GDAVVSTLCDSLRRGCNWDTLTR 1887
            LGS+ V+   +    +P FA+ K  +IH+  + +    D++V+++ DS ++  NW TLT+
Sbjct: 8    LGSLLVSTSIH---HNPCFALPKSIIIHSHSLSQLNNNDSIVNSISDSFKKTHNWGTLTK 64

Query: 1886 KFDTVELSDSIVDKVLLELKEPTDAKRALGFFHWSAQRNKKFEHGVRSYCITIQILVRAG 1707
             F +V+L+ S+V +VLL+LK+P  A+ AL FF+WSA +++ F+H + SYCI I ILV A 
Sbjct: 65   TFSSVQLTHSLVQQVLLQLKQPEHARSALNFFYWSA-KSQNFKHQIYSYCIAIHILVHAK 123

Query: 1706 LLVDARALLESVLKKN--EGXXXXXXXXXXXSYKLTASDPFVFDLLVRTYAKLRMLHTAF 1533
             L +A+ LL S LK +  +            SY +  S   VFDLLV+ YAKLRML  AF
Sbjct: 124  QLPEAKILLHSALKTSAPDSTRSCILESLLGSYNVVGSSTLVFDLLVQAYAKLRMLEDAF 183

Query: 1532 DVCRYLIKHGFSLKLITFNILFHVVQKSSHNLFVWEIYEFMIQNRTYPNEVTIRTMVSAL 1353
            +VC YL  HGFSL L++FN L H + KS  N+ VW++YE MI+ R YPNE+TIRTM+SAL
Sbjct: 184  EVCCYLENHGFSLTLLSFNALLHGILKSGENVMVWKVYEHMIEKRKYPNEITIRTMISAL 243

Query: 1352 CKEGKLQRFVDVLDRVHGKRCPPMVIVNTSLIFRIVEEGRIEEGMVLLKRMLQKNMIIDT 1173
            CKEGKLQ  VD+LD++ GKRC P+VIVNT L+F+++EEGRIE+GM LLKRMLQKN+I+D+
Sbjct: 244  CKEGKLQVVVDLLDKILGKRCSPIVIVNTHLVFKVIEEGRIEDGMELLKRMLQKNLILDS 303

Query: 1172 VAFSLVVHAKAKLGNIDSAWEVYEEMLKRGFHENSFVYTSFIGAYCREGRIEEASCLIQE 993
            +A+S VVH K KLGN++ AWEV+EEMLKRGF  NSF+++SFI AY   GRI EA  +++E
Sbjct: 304  IAYSFVVHTKLKLGNLELAWEVHEEMLKRGFIANSFLFSSFIRAYSESGRIHEAENVLRE 363

Query: 992  MEGKGLKPYGETYDTLIVGCAKGGKLEESLRFCEKMMEREIVPSCSAFNEMVANLCETDD 813
            ME  GLKPY ET++ LI GCAK G+++ S+R CE+M+ R +VPSCS FNEMV  LCE  D
Sbjct: 364  MENMGLKPYDETFNYLIEGCAKAGEMKASVRHCEEMIRRGLVPSCSTFNEMVRGLCEIGD 423

Query: 812  LKLANGMLTVLLDKGFIPDEITYSHFIAGYGKVGEVQEVLKLYFEMEYRSLSPGNSVFTL 633
             + AN +LT++LDKGF+P+E TYSH IAGYGK G +Q+V KLY+EMEY+SLSPG  VFT 
Sbjct: 424  SENANALLTLVLDKGFLPNETTYSHLIAGYGKEGNIQQVFKLYYEMEYKSLSPGLPVFTS 483

Query: 632  LIGSLCQCGKLEEAEKYLK 576
            LI  LC CGKLEEAE+ ++
Sbjct: 484  LIRCLCHCGKLEEAERVMQ 502



 Score =  107 bits (267), Expect = 2e-20
 Identities = 62/285 (21%), Positives = 137/285 (48%), Gaps = 5/285 (1%)
 Frame = -2

Query: 1280 VIVNTSLIFRIVEEG-----RIEEGMVLLKRMLQKNMIIDTVAFSLVVHAKAKLGNIDSA 1116
            V+ +++L+F ++ +       +E+   +   +      +  ++F+ ++H   K G     
Sbjct: 158  VVGSSTLVFDLLVQAYAKLRMLEDAFEVCCYLENHGFSLTLLSFNALLHGILKSGENVMV 217

Query: 1115 WEVYEEMLKRGFHENSFVYTSFIGAYCREGRIEEASCLIQEMEGKGLKPYGETYDTLIVG 936
            W+VYE M+++  + N     + I A C+EG+++    L+ ++ GK   P       L+  
Sbjct: 218  WKVYEHMIEKRKYPNEITIRTMISALCKEGKLQVVVDLLDKILGKRCSPIVIVNTHLVFK 277

Query: 935  CAKGGKLEESLRFCEKMMEREIVPSCSAFNEMVANLCETDDLKLANGMLTVLLDKGFIPD 756
              + G++E+ +   ++M+++ ++    A++ +V    +  +L+LA  +   +L +GFI +
Sbjct: 278  VIEEGRIEDGMELLKRMLQKNLILDSIAYSFVVHTKLKLGNLELAWEVHEEMLKRGFIAN 337

Query: 755  EITYSHFIAGYGKVGEVQEVLKLYFEMEYRSLSPGNSVFTLLIGSLCQCGKLEEAEKYLK 576
               +S FI  Y + G + E   +  EME   L P +  F  LI    + G+++ + ++ +
Sbjct: 338  SFLFSSFIRAYSESGRIHEAENVLREMENMGLKPYDETFNYLIEGCAKAGEMKASVRHCE 397

Query: 575  IMKDRSIAPSSCIYEALIASHYEKGDKKRALQLYKDMISDGLKPS 441
             M  R + PS   +  ++    E GD + A  L   ++  G  P+
Sbjct: 398  EMIRRGLVPSCSTFNEMVRGLCEIGDSENANALLTLVLDKGFLPN 442



 Score = 74.7 bits (182), Expect = 2e-10
 Identities = 49/224 (21%), Positives = 101/224 (45%)
 Frame = -2

Query: 1547 LHTAFDVCRYLIKHGFSLKLITFNILFHVVQKSSHNLFVWEIYEFMIQNRTYPNEVTIRT 1368
            +    ++ + +++    L  I ++ + H   K  +    WE++E M++     N     +
Sbjct: 284  IEDGMELLKRMLQKNLILDSIAYSFVVHTKLKLGNLELAWEVHEEMLKRGFIANSFLFSS 343

Query: 1367 MVSALCKEGKLQRFVDVLDRVHGKRCPPMVIVNTSLIFRIVEEGRIEEGMVLLKRMLQKN 1188
             + A  + G++    +VL  +      P       LI    + G ++  +   + M+++ 
Sbjct: 344  FIRAYSESGRIHEAENVLREMENMGLKPYDETFNYLIEGCAKAGEMKASVRHCEEMIRRG 403

Query: 1187 MIIDTVAFSLVVHAKAKLGNIDSAWEVYEEMLKRGFHENSFVYTSFIGAYCREGRIEEAS 1008
            ++     F+ +V    ++G+ ++A  +   +L +GF  N   Y+  I  Y +EG I++  
Sbjct: 404  LVPSCSTFNEMVRGLCEIGDSENANALLTLVLDKGFLPNETTYSHLIAGYGKEGNIQQVF 463

Query: 1007 CLIQEMEGKGLKPYGETYDTLIVGCAKGGKLEESLRFCEKMMER 876
             L  EME K L P    + +LI      GKLEE+    E++M+R
Sbjct: 464  KLYYEMEYKSLSPGLPVFTSLIRCLCHCGKLEEA----ERVMQR 503


>ref|XP_004240257.1| PREDICTED: pentatricopeptide repeat-containing protein At1g66345,
            mitochondrial-like [Solanum lycopersicum]
          Length = 552

 Score =  533 bits (1373), Expect = e-148
 Identities = 264/497 (53%), Positives = 360/497 (72%), Gaps = 3/497 (0%)
 Frame = -2

Query: 1952 DAVVSTLCDSLRRGCNWDTLTRKFDTVELSDSIVDKVLLELKEPTDAKRALGFFHWSAQR 1773
            +++++++C+SLRRG NW  LT+KF +   +D IV +VLL+LKEP DAK AL FFHWSA +
Sbjct: 47   NSIITSMCNSLRRGENWQVLTKKFQSFHFTDPIVQEVLLQLKEPHDAKNALSFFHWSA-K 105

Query: 1772 NKKFEHGVRSYCITIQILVRAGLLVDARALLESVLKKN---EGXXXXXXXXXXXSYKLTA 1602
            +    HGV  YCI I IL ++ L+  A AL+ESVL+K    +G           SYKL  
Sbjct: 106  SFNSRHGVFIYCIIIHILAKSKLVRHANALIESVLRKESGVDGHVFSVLACLIGSYKLAD 165

Query: 1601 SDPFVFDLLVRTYAKLRMLHTAFDVCRYLIKHGFSLKLITFNILFHVVQKSSHNLFVWEI 1422
            S  FVFDL V+  AKLRM+    DVC+ L  +GF L LI++N L HVVQKS     VW I
Sbjct: 166  SCSFVFDLFVQCCAKLRMIDKGLDVCKLLDGNGFMLSLISYNTLLHVVQKSEKTSMVWGI 225

Query: 1421 YEFMIQNRTYPNEVTIRTMVSALCKEGKLQRFVDVLDRVHGKRCPPMVIVNTSLIFRIVE 1242
            YE+MI+ R YPNE+T R M+SALCK+G+LQRF+DVL++ HGKRC P V+VNT LI+ ++E
Sbjct: 226  YEYMIEKRIYPNEMTTRIMISALCKQGRLQRFLDVLEKSHGKRCRPGVVVNTCLIYGMIE 285

Query: 1241 EGRIEEGMVLLKRMLQKNMIIDTVAFSLVVHAKAKLGNIDSAWEVYEEMLKRGFHENSFV 1062
            EGRIE+G+ L++RMLQKNMI+DT++ SL+V AK K+ +++SAW VY+EML+RGF  N+ V
Sbjct: 286  EGRIEDGLRLMRRMLQKNMILDTISCSLIVLAKVKMRDLESAWGVYDEMLRRGFEGNALV 345

Query: 1061 YTSFIGAYCREGRIEEASCLIQEMEGKGLKPYGETYDTLIVGCAKGGKLEESLRFCEKMM 882
            Y SFIGAYC E RI+EA  L+ EME   +KP+ ET++ LI  C++ G+LEESL+ C+KM+
Sbjct: 346  YDSFIGAYCEEKRIDEAIKLMDEMECLNMKPFSETFNHLIKVCSEVGRLEESLKICDKMI 405

Query: 881  EREIVPSCSAFNEMVANLCETDDLKLANGMLTVLLDKGFIPDEITYSHFIAGYGKVGEVQ 702
               ++PSC +FN +VA L E    K AN +LT L+DKGFIPD+  YS+ I GY  VG+V+
Sbjct: 406  GNGLLPSCLSFNALVAKLSENGSAKCANKLLTTLMDKGFIPDQSIYSYLIVGYANVGDVE 465

Query: 701  EVLKLYFEMEYRSLSPGNSVFTLLIGSLCQCGKLEEAEKYLKIMKDRSIAPSSCIYEALI 522
              LKLY+EM+YRS+SP  S+F  LI +LC+CG+L+EA+++L +M  +S+ PS  +Y+ LI
Sbjct: 466  GALKLYYEMQYRSISPNTSIFDYLIIALCECGRLKEADEFLSLMIGQSLRPSIHVYKKLI 525

Query: 521  ASHYEKGDKKRALQLYK 471
            A H E+GD+ RA  LY+
Sbjct: 526  ARHLERGDETRANHLYR 542



 Score =  116 bits (290), Expect = 5e-23
 Identities = 67/266 (25%), Positives = 129/266 (48%)
 Frame = -2

Query: 1232 IEEGMVLLKRMLQKNMIIDTVAFSLVVHAKAKLGNIDSAWEVYEEMLKRGFHENSFVYTS 1053
            I++G+ + K +     ++  ++++ ++H   K       W +YE M+++  + N      
Sbjct: 184  IDKGLDVCKLLDGNGFMLSLISYNTLLHVVQKSEKTSMVWGIYEYMIEKRIYPNEMTTRI 243

Query: 1052 FIGAYCREGRIEEASCLIQEMEGKGLKPYGETYDTLIVGCAKGGKLEESLRFCEKMMERE 873
             I A C++GR++    ++++  GK  +P       LI G  + G++E+ LR   +M+++ 
Sbjct: 244  MISALCKQGRLQRFLDVLEKSHGKRCRPGVVVNTCLIYGMIEEGRIEDGLRLMRRMLQKN 303

Query: 872  IVPSCSAFNEMVANLCETDDLKLANGMLTVLLDKGFIPDEITYSHFIAGYGKVGEVQEVL 693
            ++    + + +V    +  DL+ A G+   +L +GF  + + Y  FI  Y +   + E +
Sbjct: 304  MILDTISCSLIVLAKVKMRDLESAWGVYDEMLRRGFEGNALVYDSFIGAYCEEKRIDEAI 363

Query: 692  KLYFEMEYRSLSPGNSVFTLLIGSLCQCGKLEEAEKYLKIMKDRSIAPSSCIYEALIASH 513
            KL  EME  ++ P +  F  LI    + G+LEE+ K    M    + PS   + AL+A  
Sbjct: 364  KLMDEMECLNMKPFSETFNHLIKVCSEVGRLEESLKICDKMIGNGLLPSCLSFNALVAKL 423

Query: 512  YEKGDKKRALQLYKDMISDGLKPSWS 435
             E G  K A +L   ++  G  P  S
Sbjct: 424  SENGSAKCANKLLTTLMDKGFIPDQS 449


>ref|XP_004486552.1| PREDICTED: pentatricopeptide repeat-containing protein At1g66345,
            mitochondrial-like [Cicer arietinum]
            gi|502183720|ref|XP_004517198.1| PREDICTED:
            pentatricopeptide repeat-containing protein At1g66345,
            mitochondrial-like [Cicer arietinum]
          Length = 551

 Score =  521 bits (1343), Expect = e-145
 Identities = 272/510 (53%), Positives = 366/510 (71%), Gaps = 14/510 (2%)
 Frame = -2

Query: 1946 VVSTLCDSLRRGCNWDTLTRKFDTVELSDSIVDKVLLELKEPTDAKRALGFFHWSAQRNK 1767
            +V+ LC+S R   NWDTLT KF +++L+ S+V++VLLELK PTDAK AL FFHWS++ + 
Sbjct: 37   IVTLLCNSFRMKQNWDTLTHKFSSIKLNHSLVEQVLLELKHPTDAKNALSFFHWSSKTHS 96

Query: 1766 KFEHGVRSYCITIQILVRAGLLVDARALLESVLKKN---EGXXXXXXXXXXXSYKLTASD 1596
             F+HG+RSY ITI +L++AGL+ DA ALLES++ K+                S  ++ S 
Sbjct: 97   -FQHGLRSYSITIHLLLQAGLITDANALLESLVNKHTKTHTVRAIIDSFINTSESVSGSH 155

Query: 1595 PFVFDLLVRTYAKLRMLHTAFDVCRYLIKHGFSLKLITFNILFHVVQKSSHNLFVWEIYE 1416
              VFDLLV+ YAK R+   AF VCR + + GF + L +FN L +V QK +    VW++Y 
Sbjct: 156  LPVFDLLVKAYAKARLTDVAFAVCRCVEECGFCVSLSSFNALLYVAQKGNRFSTVWDVYG 215

Query: 1415 FMIQNRTYPNEVTIRTMVSALCKEGKLQRFVDVLDRVHGKRCP--PMVIVNTSLIFRIVE 1242
            +MI  R YPN VT+R M+ ALCKEG LQR VD LD++ GKR    P VIVN SLI R++E
Sbjct: 216  YMIGKRIYPNVVTLRIMIDALCKEGLLQRNVDALDQIIGKRNSHSPSVIVNLSLILRMLE 275

Query: 1241 EGRIEEGMV---------LLKRMLQKNMIIDTVAFSLVVHAKAKLGNIDSAWEVYEEMLK 1089
            +G +EE  V         LLKR+LQKN+I D+VA+SL+VH K +LGN+DSA E+YEEM++
Sbjct: 276  KGNVEEEDVDNELVKLVTLLKRLLQKNLIGDSVAYSLIVHVKIRLGNLDSALEIYEEMVR 335

Query: 1088 RGFHENSFVYTSFIGAYCREGRIEEASCLIQEMEGKGLKPYGETYDTLIVGCAKGGKLEE 909
            RGF+ENSFV+TSFI  +C +GRI++A  L++EME KGL+PYGET++ +IVGCA  G+L++
Sbjct: 336  RGFNENSFVHTSFIRVFCGKGRIDKAIELMKEMEAKGLRPYGETFECVIVGCADSGRLKD 395

Query: 908  SLRFCEKMMEREIVPSCSAFNEMVANLCETDDLKLANGMLTVLLDKGFIPDEITYSHFIA 729
               + E+M+    VPSCS+F++MVA LCE  D++ AN  LTVLLDKGF+P + TYSH I 
Sbjct: 396  CSSYFEEMLCAGFVPSCSSFDKMVAKLCENGDVEKANDFLTVLLDKGFLPSDETYSHLIY 455

Query: 728  GYGKVGEVQEVLKLYFEMEYRSLSPGNSVFTLLIGSLCQCGKLEEAEKYLKIMKDRSIAP 549
            GY    EVQEVLK+Y+EMEY+S+ PG SV++ +I  LC+ GKLE++EKYL+IMK RS+ P
Sbjct: 456  GYAIKDEVQEVLKIYYEMEYKSMCPGLSVYSSMIKCLCRFGKLEDSEKYLRIMKGRSLVP 515

Query: 548  SSCIYEALIASHYEKGDKKRALQLYKDMIS 459
            +  IYE LIA H +KG+  RALQL  +M S
Sbjct: 516  NVNIYETLIACHVQKGNNDRALQLRNEMAS 545



 Score = 79.7 bits (195), Expect = 5e-12
 Identities = 67/368 (18%), Positives = 154/368 (41%), Gaps = 12/368 (3%)
 Frame = -2

Query: 1508 HGFSLKLITFNILFHVVQKSSHNLFVWEIYEFMIQNRTYPNEVTIRTMVSALCKEGKLQR 1329
            H F   L +++I  H++ ++        + E ++   T  +  T+R ++ +         
Sbjct: 95   HSFQHGLRSYSITIHLLLQAGLITDANALLESLVNKHTKTH--TVRAIIDS--------- 143

Query: 1328 FVDVLDRVHGKRCPPMVIVNTSLIFRIVEEGRIEEGMVLLKRMLQK-NMIIDTVAFSLVV 1152
            F++  + V G   P        L+ +   + R+ +    + R +++    +   +F+ ++
Sbjct: 144  FINTSESVSGSHLPVF-----DLLVKAYAKARLTDVAFAVCRCVEECGFCVSLSSFNALL 198

Query: 1151 HAKAKLGNIDSAWEVYEEMLKRGFHENSFVYTSFIGAYCREGRIEEASCLIQEMEGK--G 978
            +   K     + W+VY  M+ +  + N       I A C+EG ++     + ++ GK   
Sbjct: 199  YVAQKGNRFSTVWDVYGYMIGKRIYPNVVTLRIMIDALCKEGLLQRNVDALDQIIGKRNS 258

Query: 977  LKPYGETYDTLIVGCAKGGKLEES---------LRFCEKMMEREIVPSCSAFNEMVANLC 825
              P      +LI+   + G +EE          +   ++++++ ++    A++ +V    
Sbjct: 259  HSPSVIVNLSLILRMLEKGNVEEEDVDNELVKLVTLLKRLLQKNLIGDSVAYSLIVHVKI 318

Query: 824  ETDDLKLANGMLTVLLDKGFIPDEITYSHFIAGYGKVGEVQEVLKLYFEMEYRSLSPGNS 645
               +L  A  +   ++ +GF  +   ++ FI  +   G + + ++L  EME + L P   
Sbjct: 319  RLGNLDSALEIYEEMVRRGFNENSFVHTSFIRVFCGKGRIDKAIELMKEMEAKGLRPYGE 378

Query: 644  VFTLLIGSLCQCGKLEEAEKYLKIMKDRSIAPSSCIYEALIASHYEKGDKKRALQLYKDM 465
             F  +I      G+L++   Y + M      PS   ++ ++A   E GD ++A      +
Sbjct: 379  TFECVIVGCADSGRLKDCSSYFEEMLCAGFVPSCSSFDKMVAKLCENGDVEKANDFLTVL 438

Query: 464  ISDGLKPS 441
            +  G  PS
Sbjct: 439  LDKGFLPS 446



 Score = 62.8 bits (151), Expect = 7e-07
 Identities = 47/242 (19%), Positives = 96/242 (39%)
 Frame = -2

Query: 1598 DPFVFDLLVRTYAKLRMLHTAFDVCRYLIKHGFSLKLITFNILFHVVQKSSHNLFVWEIY 1419
            D   + L+V    +L  L +A ++   +++ GF+           V           E+ 
Sbjct: 306  DSVAYSLIVHVKIRLGNLDSALEIYEEMVRRGFNENSFVHTSFIRVFCGKGRIDKAIELM 365

Query: 1418 EFMIQNRTYPNEVTIRTMVSALCKEGKLQRFVDVLDRVHGKRCPPMVIVNTSLIFRIVEE 1239
            + M      P   T   ++      G+L+      + +      P       ++ ++ E 
Sbjct: 366  KEMEAKGLRPYGETFECVIVGCADSGRLKDCSSYFEEMLCAGFVPSCSSFDKMVAKLCEN 425

Query: 1238 GRIEEGMVLLKRMLQKNMIIDTVAFSLVVHAKAKLGNIDSAWEVYEEMLKRGFHENSFVY 1059
            G +E+    L  +L K  +     +S +++  A    +    ++Y EM  +       VY
Sbjct: 426  GDVEKANDFLTVLLDKGFLPSDETYSHLIYGYAIKDEVQEVLKIYYEMEYKSMCPGLSVY 485

Query: 1058 TSFIGAYCREGRIEEASCLIQEMEGKGLKPYGETYDTLIVGCAKGGKLEESLRFCEKMME 879
            +S I   CR G++E++   ++ M+G+ L P    Y+TLI    + G  + +L+   +M  
Sbjct: 486  SSMIKCLCRFGKLEDSEKYLRIMKGRSLVPNVNIYETLIACHVQKGNNDRALQLRNEMAS 545

Query: 878  RE 873
             E
Sbjct: 546  LE 547


>gb|EYU26093.1| hypothetical protein MIMGU_mgv1a027076mg [Mimulus guttatus]
          Length = 541

 Score =  520 bits (1339), Expect = e-144
 Identities = 260/503 (51%), Positives = 357/503 (70%), Gaps = 6/503 (1%)
 Frame = -2

Query: 1943 VSTLCDSLRRGCNWDTLTRKFDTVELSDSIVDKVLLELKEPTDAKRALGFFHWSAQRNKK 1764
            +++L DSL    +W TL+ KF +++ ++ IV  +LL+LKEP ++++AL FFHWS ++   
Sbjct: 40   ITSLIDSLHERRSWKTLSEKFSSLKFTNQIVQNILLQLKEPINSRKALNFFHWS-RKEMN 98

Query: 1763 FEHGVRSYCITIQILVRAGLLVDARALLESVLKKN----EGXXXXXXXXXXXSYKLTASD 1596
            FEHG+ +YC+TI ILV+A L+ DA+AL+ESVL K+    +            SY +  S 
Sbjct: 99   FEHGLSTYCLTIHILVKARLIKDAKALIESVLIKDFSDGDSRMLDVLESLIDSYAIVESV 158

Query: 1595 PFVFDLLVRTYAKLRMLHTAFDVCRYLIKHGFSLKLITFNILFHVVQKSSHNLFVWEIYE 1416
            PFVFDL ++T AKLRM+    D C+ L +H F L +I+FN + HV+ KS  +  VW +YE
Sbjct: 159  PFVFDLFIQTCAKLRMVDDILDACKLLSRHDFPLSVISFNTILHVMIKSEKSRLVWSVYE 218

Query: 1415 FMIQNRTYPNEVTIRTMVSALCKEGKLQRFVDVLDRVHGKRCP-PMVIVNTSLIFRIVEE 1239
             MI  R  PNE+T R MVSALCKEGKL+RF+ ++DR+HGKRC  P +IVNT L++ ++EE
Sbjct: 219  HMISERMCPNEMTTRIMVSALCKEGKLERFLRIVDRMHGKRCSIPRLIVNTCLVYGMIEE 278

Query: 1238 GRIEEGMVLLKRMLQKNMIIDTVAFSLVVHAKAKLGNIDSAWEVYEEMLKRGFHENSFVY 1059
             +IEEG+VLLKR+LQK MI+DT+++SLV+ AK K+GN+D+A E+YEEMLKRGF EN FV 
Sbjct: 279  DKIEEGLVLLKRILQKAMILDTISYSLVIFAKVKMGNLDNAKEIYEEMLKRGFEENVFVC 338

Query: 1058 TSFIGAYCREGRIEEASCLIQEMEGKGLKPYGETYDTLIVGCAKG-GKLEESLRFCEKMM 882
            + FIGAYC EGRI+EA  L +EME  GLKP+ ET++ LI GC+   G+ E+ + FC+KMM
Sbjct: 339  SLFIGAYCEEGRIDEAVGLFEEMESLGLKPFDETFNHLIKGCSSSYGRFEDGVVFCKKMM 398

Query: 881  EREIVPSCSAFNEMVANLCETDDLKLANGMLTVLLDKGFIPDEITYSHFIAGYGKVGEVQ 702
               +VPSCS+ NEM   LCE    K A+ +LT+LLDKGF+ DE TYSH + GYGK  +V+
Sbjct: 399  SMGLVPSCSSVNEMFGKLCENAKTKEADEILTILLDKGFVADENTYSHLVCGYGKEDDVE 458

Query: 701  EVLKLYFEMEYRSLSPGNSVFTLLIGSLCQCGKLEEAEKYLKIMKDRSIAPSSCIYEALI 522
             + KL FEMEYRS+SP    F+ +I S C  G+L++AEKYL +MK RS  PS  +YE LI
Sbjct: 459  GLTKLLFEMEYRSISPNALGFSSVIVSFCNHGRLKDAEKYLGLMKSRSFIPSPNVYERLI 518

Query: 521  ASHYEKGDKKRALQLYKDMISDG 453
            + H + G++ RA QLY +M+  G
Sbjct: 519  SGHLQNGNETRARQLYGEMVGIG 541


>ref|XP_002887023.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata] gi|297332864|gb|EFH63282.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 539

 Score =  506 bits (1302), Expect = e-140
 Identities = 251/495 (50%), Positives = 341/495 (68%)
 Frame = -2

Query: 1946 VVSTLCDSLRRGCNWDTLTRKFDTVELSDSIVDKVLLELKEPTDAKRALGFFHWSAQRNK 1767
            ++ ++  SL+   NW+TL+ KF +++LSDS+++ +LL    P  AKRAL FFHWSA   +
Sbjct: 45   LIDSISKSLQSNDNWETLSTKFSSIDLSDSLIETILLRFNSPETAKRALTFFHWSAH-TR 103

Query: 1766 KFEHGVRSYCITIQILVRAGLLVDARALLESVLKKNEGXXXXXXXXXXXSYKLTASDPFV 1587
               HG+RSY +TI ILV+A LL+DARAL+ES L  +              Y  ++S P V
Sbjct: 104  NLRHGIRSYAVTIHILVKARLLIDARALIESSLLNSSSDLVDSLLDT---YVNSSSTPLV 160

Query: 1586 FDLLVRTYAKLRMLHTAFDVCRYLIKHGFSLKLITFNILFHVVQKSSHNLFVWEIYEFMI 1407
            FDLLV+ YAK+R L   F+V + L   GFSL +IT N L H   KS+    VW IYEF I
Sbjct: 161  FDLLVQCYAKIRYLELGFEVFKRLCDCGFSLSVITLNTLIHFAAKSNRVDLVWRIYEFAI 220

Query: 1406 QNRTYPNEVTIRTMVSALCKEGKLQRFVDVLDRVHGKRCPPMVIVNTSLIFRIVEEGRIE 1227
              R YPNE TIR M+S LCKEG+L+  VD+LDR++GKRC P VIVNTSL+FR++EE R+E
Sbjct: 221  DKRIYPNETTIRIMISVLCKEGRLKEVVDLLDRIYGKRCLPSVIVNTSLVFRVLEEKRVE 280

Query: 1226 EGMVLLKRMLQKNMIIDTVAFSLVVHAKAKLGNIDSAWEVYEEMLKRGFHENSFVYTSFI 1047
            E M LLKR+L KNM++D + +S+VV+AK K G+++ A  V++EM++RGF  N+FVYT+F+
Sbjct: 281  ESMSLLKRLLMKNMVVDVIGYSIVVYAKTKKGDLECARNVFDEMIRRGFSANAFVYTAFV 340

Query: 1046 GAYCREGRIEEASCLIQEMEGKGLKPYGETYDTLIVGCAKGGKLEESLRFCEKMMEREIV 867
               C  G +EEA  L+ EME  G+ PY ET++ LIVGCA+ G+ E+ L +CE M+ R ++
Sbjct: 341  RVCCERGDVEEAERLMSEMEDSGVNPYEETFNFLIVGCARFGREEKGLEYCEIMVARGLM 400

Query: 866  PSCSAFNEMVANLCETDDLKLANGMLTVLLDKGFIPDEITYSHFIAGYGKVGEVQEVLKL 687
            PSCSAFN MV  L E D++  AN +LT  +DKGF+PDE TYSH I G+ +   + + LKL
Sbjct: 401  PSCSAFNGMVKRLSEIDNVNRANEILTKSIDKGFVPDEHTYSHLIRGFVEGNSIDQALKL 460

Query: 686  YFEMEYRSLSPGNSVFTLLIGSLCQCGKLEEAEKYLKIMKDRSIAPSSCIYEALIASHYE 507
            ++EMEYR +SPG  VF  LI  LC CGK+E  EKYL+IMK R I P++ IYEA+I +  +
Sbjct: 461  FYEMEYRKISPGFEVFRSLIVGLCACGKVEAGEKYLRIMKRRLIEPNADIYEAMINAFQK 520

Query: 506  KGDKKRALQLYKDMI 462
             GDK  A ++Y +MI
Sbjct: 521  IGDKTNADKVYNEMI 535



 Score = 84.7 bits (208), Expect = 2e-13
 Identities = 59/250 (23%), Positives = 114/250 (45%)
 Frame = -2

Query: 1172 VAFSLVVHAKAKLGNIDSAWEVYEEMLKRGFHENSFVYTSFIGAYCREGRIEEASCLIQE 993
            + F L+V   AK+  ++  +EV++ +   GF  +     + I    +  R++    + + 
Sbjct: 159  LVFDLLVQCYAKIRYLELGFEVFKRLCDCGFSLSVITLNTLIHFAAKSNRVDLVWRIYEF 218

Query: 992  MEGKGLKPYGETYDTLIVGCAKGGKLEESLRFCEKMMEREIVPSCSAFNEMVANLCETDD 813
               K + P   T   +I    K G+L+E +   +++  +  +PS      +V  + E   
Sbjct: 219  AIDKRIYPNETTIRIMISVLCKEGRLKEVVDLLDRIYGKRCLPSVIVNTSLVFRVLEEKR 278

Query: 812  LKLANGMLTVLLDKGFIPDEITYSHFIAGYGKVGEVQEVLKLYFEMEYRSLSPGNSVFTL 633
            ++ +  +L  LL K  + D I YS  +    K G+++    ++ EM  R  S    V+T 
Sbjct: 279  VEESMSLLKRLLMKNMVVDVIGYSIVVYAKTKKGDLECARNVFDEMIRRGFSANAFVYTA 338

Query: 632  LIGSLCQCGKLEEAEKYLKIMKDRSIAPSSCIYEALIASHYEKGDKKRALQLYKDMISDG 453
             +   C+ G +EEAE+ +  M+D  + P    +  LI      G +++ L+  + M++ G
Sbjct: 339  FVRVCCERGDVEEAERLMSEMEDSGVNPYEETFNFLIVGCARFGREEKGLEYCEIMVARG 398

Query: 452  LKPSWSNSGG 423
            L PS S   G
Sbjct: 399  LMPSCSAFNG 408