BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia25_contig00032196
         (1410 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118...   547   e-153
gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subc...   521   e-145
emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group]           521   e-145
gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subc...   519   e-144
gb|ACS74199.1| putative gag-pol polyprotein [Fragaria x ananassa]     518   e-144
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-...   511   e-142
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]     505   e-140
gb|AAT44257.1| putative polyprotein [Oryza sativa Japonica Group]     505   e-140
gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group...   505   e-140
gb|AAT01387.1| putative polyprotein [Oryza sativa Japonica Group...   496   e-137
gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-...   496   e-137
emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis]        494   e-137
gb|AAW22873.1| putative polyprotein [Solanum lycopersicum]            494   e-137
emb|CAN79684.1| hypothetical protein VITISV_003855 [Vitis vinifera]   493   e-136
emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera]   491   e-136
sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol poly...   490   e-136
emb|CAN74702.1| hypothetical protein VITISV_023139 [Vitis vinifera]   487   e-135
dbj|BAB09923.1| copia-like retrotransposable element [Arabidopsi...   484   e-134
gb|ABG22121.1| polyprotein [Solanum melongena]                        483   e-134
emb|CAN62181.1| hypothetical protein VITISV_044399 [Vitis vinifera]   483   e-134

>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1|
            copia LTR rider [Solanum lycopersicum]
          Length = 1307

 Score =  547 bits (1409), Expect = e-153
 Identities = 270/415 (65%), Positives = 326/415 (78%)
 Frame = -2

Query: 1409 AQYDMELEQMDVKTAFLHGDLEEDIYMSQPDGFVVAGKEDHVCRLKKSLYGLKQSPRQWY 1230
            A  ++ELEQ+DVKTAFLHG+LEE+IYM+QPDGF V GKE+HVC+LKKSLYGLKQSPRQWY
Sbjct: 893  AHQNLELEQLDVKTAFLHGELEEEIYMTQPDGFQVPGKENHVCKLKKSLYGLKQSPRQWY 952

Query: 1229 LRFDRFMVKQRYKRSEYDHCVYYKKLNSGSYIYLLLYVDDMLIAAKSKHDIDLLKDQLSK 1050
             RFD +MVK  Y RS YD CVYY +LN  S+IYL+LYVDDMLIAAK K+DI  LK  LS 
Sbjct: 953  KRFDSYMVKLGYTRSSYDCCVYYNRLNDDSFIYLVLYVDDMLIAAKKKYDIQKLKGLLSA 1012

Query: 1049 EFEMKDLGAAKKILGMVISRDRKLGRLTVSQRDYVEKVLSRFGMSDSKPVTTPLGAQFRL 870
            EFEMKDLGAA+KILGM I RDR+  +L +SQR Y++KVL+RFGMS SKP+ TP  A   L
Sbjct: 1013 EFEMKDLGAARKILGMEIIRDRERRKLFLSQRSYIQKVLARFGMSSSKPIDTPSAANIHL 1072

Query: 869  TALQSPTTEVEKEYMANVPYASAVGSLMYAMVCTRPDIAHAVSMVSRYMSNPGKQHWLAV 690
            TA+ +P +E EKEYM+ VPYASAVGSLMYAMVCTRPD+AHAVS+VSR+M  PG++HW AV
Sbjct: 1073 TAMFAPQSEEEKEYMSRVPYASAVGSLMYAMVCTRPDLAHAVSVVSRFMGQPGREHWQAV 1132

Query: 689  KWVLRYLRGTVGKGLVYQRTTRPCIRGFVDADYAGDLDRRRSTTGFSFVLGDGPICWRSM 510
            K + RYLRGT   GL+Y   T+  + G+ D+DYAGD+D RRS TG+ F LG   + W++ 
Sbjct: 1133 KRIFRYLRGTSDVGLIYGGDTQCLVTGYSDSDYAGDVDTRRSMTGYVFTLGGSVVSWKAT 1192

Query: 509  LQSVVALSTTEAEYMAVTEAVKEAIWLQNLISELGVRQQVISVSCDNQSAIHLAKNQVHH 330
            LQ  V LSTTEAEYMA+TEA KE IWL+ L+S+LG+     +V CD+ SAI LAK+QVHH
Sbjct: 1193 LQPTVTLSTTEAEYMALTEAAKEGIWLKGLVSDLGLHHDQATVYCDSLSAICLAKDQVHH 1252

Query: 329  ARTKHIDVRYHFIRDEIEKKIVHLEKVDTAHNPADMLTKVVGGVKFEHCLNLLHI 165
             RTKHIDVRYHF+R E   K + ++KV TA NPADM TK V   KF+HCL+LL+I
Sbjct: 1253 ERTKHIDVRYHFLRSE---KRIKVKKVGTADNPADMFTKPVPQSKFQHCLDLLNI 1304


>gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1333

 Score =  521 bits (1343), Expect = e-145
 Identities = 258/413 (62%), Positives = 325/413 (78%)
 Frame = -2

Query: 1409 AQYDMELEQMDVKTAFLHGDLEEDIYMSQPDGFVVAGKEDHVCRLKKSLYGLKQSPRQWY 1230
            A +D+ELEQ+DVKTAFLHG+LEEDIYM QP+GF+V GKE +VC+LK+SLYGLKQSPRQW 
Sbjct: 919  ASHDLELEQLDVKTAFLHGELEEDIYMDQPEGFIVPGKEKYVCKLKRSLYGLKQSPRQWN 978

Query: 1229 LRFDRFMVKQRYKRSEYDHCVYYKKLNSGSYIYLLLYVDDMLIAAKSKHDIDLLKDQLSK 1050
             RFD FM+   +KRS+YD CVY K +N GS IYLLLYVDDMLIAAKSK +I  LK  LS 
Sbjct: 979  KRFDSFMLSHSFKRSKYDSCVYIKHVN-GSPIYLLLYVDDMLIAAKSKIEITKLKKLLSS 1037

Query: 1049 EFEMKDLGAAKKILGMVISRDRKLGRLTVSQRDYVEKVLSRFGMSDSKPVTTPLGAQFRL 870
            EF+MKDLG+AKKILGM ISRDRK G L +SQ +Y++KVL RF M ++K V+TP+   F+L
Sbjct: 1038 EFDMKDLGSAKKILGMEISRDRKSGLLFLSQHNYIKKVLQRFNMQNAKAVSTPIAPHFKL 1097

Query: 869  TALQSPTTEVEKEYMANVPYASAVGSLMYAMVCTRPDIAHAVSMVSRYMSNPGKQHWLAV 690
            +A Q P+ + E EYM+ VPY+SAVGSLMYAMVC+RPD+++A+S+VSRYMSNPGK+HW AV
Sbjct: 1098 SAAQCPSIDAEIEYMSRVPYSSAVGSLMYAMVCSRPDLSYAMSLVSRYMSNPGKEHWRAV 1157

Query: 689  KWVLRYLRGTVGKGLVYQRTTRPCIRGFVDADYAGDLDRRRSTTGFSFVLGDGPICWRSM 510
            +W+ RYLRGT    L + RT +  I G+VD+DYA DLDRRRS TG+ F +G   + WR+ 
Sbjct: 1158 QWIFRYLRGTTYSCLKFGRTDKGLI-GYVDSDYAADLDRRRSLTGYVFTIGSCAVSWRAT 1216

Query: 509  LQSVVALSTTEAEYMAVTEAVKEAIWLQNLISELGVRQQVISVSCDNQSAIHLAKNQVHH 330
            LQSVVALSTTEAEYMA+ EA KE IWL+ L +EL   +  IS+ CD+QSAI+L K+Q+ H
Sbjct: 1217 LQSVVALSTTEAEYMAICEACKELIWLKGLYAELSGVESCISLHCDSQSAIYLTKDQMFH 1276

Query: 329  ARTKHIDVRYHFIRDEIEKKIVHLEKVDTAHNPADMLTKVVGGVKFEHCLNLL 171
             RTKHID++YHF+RD IE+  + + K+ T  NPADM+TK +   KFE C +L+
Sbjct: 1277 ERTKHIDIKYHFVRDVIEEGKLKVCKISTHDNPADMMTKPIPVAKFELCSSLV 1329


>emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group]
          Length = 1335

 Score =  521 bits (1343), Expect = e-145
 Identities = 258/413 (62%), Positives = 326/413 (78%)
 Frame = -2

Query: 1409 AQYDMELEQMDVKTAFLHGDLEEDIYMSQPDGFVVAGKEDHVCRLKKSLYGLKQSPRQWY 1230
            A +D+ELEQ+DVKTAFLHG+LEEDIYM QP+GF+V GKE +VC+LK+SLYGLKQSPRQW 
Sbjct: 921  ASHDLELEQLDVKTAFLHGELEEDIYMDQPEGFIVPGKEKYVCKLKRSLYGLKQSPRQWN 980

Query: 1229 LRFDRFMVKQRYKRSEYDHCVYYKKLNSGSYIYLLLYVDDMLIAAKSKHDIDLLKDQLSK 1050
             RFD FM+   +KRS+YD CVY K +N GS IYLLLYVDDMLIAAKSK +I  LK  LS 
Sbjct: 981  KRFDSFMLSHSFKRSKYDSCVYIKHVN-GSPIYLLLYVDDMLIAAKSKIEITKLKKLLSS 1039

Query: 1049 EFEMKDLGAAKKILGMVISRDRKLGRLTVSQRDYVEKVLSRFGMSDSKPVTTPLGAQFRL 870
            EF+MKDLG+AKKILGM ISRDRK G L +SQ +Y++KVL RF M ++K V+TP+   F+L
Sbjct: 1040 EFDMKDLGSAKKILGMEISRDRKSGLLFLSQHNYIKKVLQRFNMQNAKAVSTPIAPHFKL 1099

Query: 869  TALQSPTTEVEKEYMANVPYASAVGSLMYAMVCTRPDIAHAVSMVSRYMSNPGKQHWLAV 690
            +A Q P+T+ E EYM+ VPY+SAVGSLMYAMVC+RPD+++A+S+VSRYMSNPGK+HW A+
Sbjct: 1100 SAAQCPSTDAEIEYMSRVPYSSAVGSLMYAMVCSRPDLSYAMSLVSRYMSNPGKEHWRAL 1159

Query: 689  KWVLRYLRGTVGKGLVYQRTTRPCIRGFVDADYAGDLDRRRSTTGFSFVLGDGPICWRSM 510
            +W+ RYLRGT    L + RT +  I G+VD+DYA DLDRRRS TG+ F +G   + WR+ 
Sbjct: 1160 QWIFRYLRGTTYSCLKFGRTDKGLI-GYVDSDYAADLDRRRSLTGYVFTIGSCAVSWRAT 1218

Query: 509  LQSVVALSTTEAEYMAVTEAVKEAIWLQNLISELGVRQQVISVSCDNQSAIHLAKNQVHH 330
            LQSVVALSTTEAEYMA+ EA KE IWL+ L +EL   +  IS+ CD+QSAI+L K+Q+ H
Sbjct: 1219 LQSVVALSTTEAEYMAICEACKELIWLKGLYAELSGVESCISLHCDSQSAIYLTKDQMFH 1278

Query: 329  ARTKHIDVRYHFIRDEIEKKIVHLEKVDTAHNPADMLTKVVGGVKFEHCLNLL 171
             RTKHID++YHF+RD IE+  + + K+ T  NPADM+TK +   KFE C +L+
Sbjct: 1279 ERTKHIDIKYHFVRDVIEEGKLKVCKICTHDNPADMMTKPIPVAKFELCSSLV 1331


>gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1333

 Score =  519 bits (1336), Expect = e-144
 Identities = 257/413 (62%), Positives = 324/413 (78%)
 Frame = -2

Query: 1409 AQYDMELEQMDVKTAFLHGDLEEDIYMSQPDGFVVAGKEDHVCRLKKSLYGLKQSPRQWY 1230
            A +D+ELEQ+DVKTAFLHG+LEEDIYM QP+GF+V GKE +VC+LK+SLYGLKQSPRQW 
Sbjct: 919  ASHDLELEQLDVKTAFLHGELEEDIYMDQPEGFIVPGKEKYVCKLKRSLYGLKQSPRQWN 978

Query: 1229 LRFDRFMVKQRYKRSEYDHCVYYKKLNSGSYIYLLLYVDDMLIAAKSKHDIDLLKDQLSK 1050
             RFD FM+   +KRS+YD CVY K +N GS IYLLLYVDDMLIAAKSK +I  LK  LS 
Sbjct: 979  KRFDSFMLSHSFKRSKYDSCVYIKHVN-GSPIYLLLYVDDMLIAAKSKIEITKLKKLLSS 1037

Query: 1049 EFEMKDLGAAKKILGMVISRDRKLGRLTVSQRDYVEKVLSRFGMSDSKPVTTPLGAQFRL 870
            EF+MKDLG+AKKIL M ISRDRK G L +SQ +Y++KVL RF M ++K V+TP+   F+L
Sbjct: 1038 EFDMKDLGSAKKILVMEISRDRKSGLLFLSQHNYIKKVLQRFNMQNAKAVSTPIAPHFKL 1097

Query: 869  TALQSPTTEVEKEYMANVPYASAVGSLMYAMVCTRPDIAHAVSMVSRYMSNPGKQHWLAV 690
            +A Q P+T+ E EYM+ VPY+SAVGSLMYAMVC+RPD+++A+S+VSRYMSNPGK+HW  V
Sbjct: 1098 SAAQCPSTDAEIEYMSRVPYSSAVGSLMYAMVCSRPDLSYAMSLVSRYMSNPGKEHWRVV 1157

Query: 689  KWVLRYLRGTVGKGLVYQRTTRPCIRGFVDADYAGDLDRRRSTTGFSFVLGDGPICWRSM 510
            +W+ RYLRGT    L + RT +  I G+VD+DYA DLDRRRS TG+ F +G   + WR+ 
Sbjct: 1158 QWIFRYLRGTTYSCLKFGRTDKGLI-GYVDSDYAADLDRRRSLTGYVFTIGSCAVSWRAT 1216

Query: 509  LQSVVALSTTEAEYMAVTEAVKEAIWLQNLISELGVRQQVISVSCDNQSAIHLAKNQVHH 330
            LQSVVALSTTEAEYMA+ EA KE IWL+ L +EL   +  IS+ CD+QSAI+L K+Q+ H
Sbjct: 1217 LQSVVALSTTEAEYMAICEACKELIWLKGLYAELSGVESCISLHCDSQSAIYLTKDQMFH 1276

Query: 329  ARTKHIDVRYHFIRDEIEKKIVHLEKVDTAHNPADMLTKVVGGVKFEHCLNLL 171
             RTKHID++YHF+RD IE+  + + K+ T  NPADM+TK +   KFE C +L+
Sbjct: 1277 ERTKHIDIKYHFVRDVIEEGKLKVCKISTHDNPADMMTKPIPVAKFELCSSLV 1329


>gb|ACS74199.1| putative gag-pol polyprotein [Fragaria x ananassa]
          Length = 1297

 Score =  518 bits (1333), Expect = e-144
 Identities = 255/407 (62%), Positives = 310/407 (76%), Gaps = 1/407 (0%)
 Frame = -2

Query: 1409 AQYDMELEQMDVKTAFLHGDLEEDIYMSQPDGFVVAGKEDHVCRLKKSLYGLKQSPRQWY 1230
            AQYDME+EQMDVKTAFLHGDLEEDIYMSQP+GFV  GKE+ VCRLKKSLYGLKQSPRQWY
Sbjct: 884  AQYDMEIEQMDVKTAFLHGDLEEDIYMSQPEGFVETGKENLVCRLKKSLYGLKQSPRQWY 943

Query: 1229 LRFDRFMVKQRYKRSEYDHCVYYKKLNSGSYIYLLLYVDDMLIAAKSKHDIDLLKDQLSK 1050
              FD +M+K  Y R +YD CVYY     G  I LLLYVDDMLIA +    I  LK +L  
Sbjct: 944  KPFDTYMLKIGYTRCQYDCCVYYHVFEDGKVILLLLYVDDMLIACRDMLQIQKLKKKLGA 1003

Query: 1049 EFEMKDLGAAKKILGMVISRDRKLGRLTVSQRDYVEKVLSRFGMSDSKPVTTPLGAQFRL 870
            EF+MKDLGAA+KILG+ I RDR  G++ +SQ  Y+ K+L RF M+++K V+ PL A FRL
Sbjct: 1004 EFDMKDLGAAQKILGIEIRRDRNAGKIWLSQEKYIMKILERFNMAEAKVVSIPLAAHFRL 1063

Query: 869  TALQSPTTEVEKEYMANVPYASAVGSLMYAMVCTRPDIAHAVSMVSRYMSNPGKQHWLAV 690
            +A Q P+ + E + M NVPYASAVG LMYAM+CTRPD+A A+S+VS+YMSNPGK+HW AV
Sbjct: 1064 SAEQRPSDQKEIDMMKNVPYASAVGCLMYAMICTRPDLAQAMSVVSKYMSNPGKRHWEAV 1123

Query: 689  KWVLRYLRGTVGKGLVYQRTT-RPCIRGFVDADYAGDLDRRRSTTGFSFVLGDGPICWRS 513
            KW+ +YL+ T   G++++R     C+ GFVD+D+AGDLDRRRST G+ F  G GP+ W++
Sbjct: 1124 KWIFKYLKNTRQLGIMFERRQGEACVAGFVDSDFAGDLDRRRSTAGYVFTCGGGPVSWKA 1183

Query: 512  MLQSVVALSTTEAEYMAVTEAVKEAIWLQNLISELGVRQQVISVSCDNQSAIHLAKNQVH 333
             LQ+V ALSTTEAEYMA+TEA KEAIWL  L  +LGV Q+ + V CD+QSAIHLAKNQV 
Sbjct: 1184 TLQAVTALSTTEAEYMALTEASKEAIWLNGLAGQLGVHQEGVVVKCDSQSAIHLAKNQVF 1243

Query: 332  HARTKHIDVRYHFIRDEIEKKIVHLEKVDTAHNPADMLTKVVGGVKF 192
            HARTKHID RYH IRD +E  ++ +EKV T  N AD LTK V   K+
Sbjct: 1244 HARTKHIDARYHRIRDWVEAGVIIVEKVHTDDNAADFLTKPVSVEKY 1290


>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group] gi|77548751|gb|ABA91548.1|
            retrotransposon protein, putative, Ty1-copia subclass
            [Oryza sativa Japonica Group]
          Length = 2340

 Score =  511 bits (1315), Expect = e-142
 Identities = 260/417 (62%), Positives = 321/417 (76%)
 Frame = -2

Query: 1409 AQYDMELEQMDVKTAFLHGDLEEDIYMSQPDGFVVAGKEDHVCRLKKSLYGLKQSPRQWY 1230
            A +D ELEQMDVKTAFLHG+LEEDIYM QP GFVV GKE+ VCRLKKSLYGLKQSPRQWY
Sbjct: 1125 AMHDYELEQMDVKTAFLHGELEEDIYMEQPKGFVVPGKENLVCRLKKSLYGLKQSPRQWY 1184

Query: 1229 LRFDRFMVKQRYKRSEYDHCVYYKKLNSGSYIYLLLYVDDMLIAAKSKHDIDLLKDQLSK 1050
             RFD FM+ Q+++RS YD CVY K ++ GS IYLLLYVDDMLIAAK K +I  LK QLS 
Sbjct: 1185 KRFDSFMLSQKFRRSNYDSCVYLKVVD-GSAIYLLLYVDDMLIAAKDKSEIAKLKAQLSS 1243

Query: 1049 EFEMKDLGAAKKILGMVISRDRKLGRLTVSQRDYVEKVLSRFGMSDSKPVTTPLGAQFRL 870
            EFEMKDLGAAKKILGM I+R R   +L +SQ+ Y+EKVL RF M D+KPV+TPL A FRL
Sbjct: 1244 EFEMKDLGAAKKILGMEITRKRHSFKLYLSQKGYIEKVLRRFNMHDAKPVSTPLAAHFRL 1303

Query: 869  TALQSPTTEVEKEYMANVPYASAVGSLMYAMVCTRPDIAHAVSMVSRYMSNPGKQHWLAV 690
            ++   P ++ + EYM+ VPY+SAVGSLMYAMVC+RPD++HA+S+VSRYM+NPGK+HW AV
Sbjct: 1304 SSDLCPQSDYDIEYMSRVPYSSAVGSLMYAMVCSRPDLSHALSVVSRYMANPGKEHWKAV 1363

Query: 689  KWVLRYLRGTVGKGLVYQRTTRPCIRGFVDADYAGDLDRRRSTTGFSFVLGDGPICWRSM 510
            +W+ RYLRGT    L + R +R  + G+VD+D+AGDLDR RS  G+ F +G   + W++ 
Sbjct: 1364 QWIFRYLRGTSSACLQFGR-SRDGLVGYVDSDFAGDLDRGRSLAGYVFTIGGCAVSWKAS 1422

Query: 509  LQSVVALSTTEAEYMAVTEAVKEAIWLQNLISELGVRQQVISVSCDNQSAIHLAKNQVHH 330
            LQ+ VALSTTEAEYMA++EA KEAIWL+ L + L      I++ CD+QSAI L K+Q+ H
Sbjct: 1423 LQATVALSTTEAEYMAISEACKEAIWLRGLYTVLCAVTSCINIFCDSQSAICLTKDQMFH 1482

Query: 329  ARTKHIDVRYHFIRDEIEKKIVHLEKVDTAHNPADMLTKVVGGVKFEHCLNLLHISD 159
             RTKHIDVRYHFIR  I +  V + K+    NPADM+TK V   KFE C +L+ +SD
Sbjct: 1483 ERTKHIDVRYHFIRGLIAEGDVKICKISIHDNPADMMTKPVPATKFELCSSLVILSD 1539


>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1241

 Score =  505 bits (1301), Expect = e-140
 Identities = 256/416 (61%), Positives = 321/416 (77%)
 Frame = -2

Query: 1409 AQYDMELEQMDVKTAFLHGDLEEDIYMSQPDGFVVAGKEDHVCRLKKSLYGLKQSPRQWY 1230
            A +D ELEQMDVKTAFLHG+LEEDIYM QP+GFVV GKE+ VCRLKKSLYGLKQSPRQWY
Sbjct: 827  AMHDYELEQMDVKTAFLHGELEEDIYMEQPEGFVVPGKENLVCRLKKSLYGLKQSPRQWY 886

Query: 1229 LRFDRFMVKQRYKRSEYDHCVYYKKLNSGSYIYLLLYVDDMLIAAKSKHDIDLLKDQLSK 1050
             RFD FM+ Q+++RS YD CVY K ++ GS IYLLLYVDDMLIAAK K +I  LK QLS 
Sbjct: 887  KRFDSFMLSQKFRRSNYDSCVYLKVVD-GSAIYLLLYVDDMLIAAKDKSEIAKLKAQLSS 945

Query: 1049 EFEMKDLGAAKKILGMVISRDRKLGRLTVSQRDYVEKVLSRFGMSDSKPVTTPLGAQFRL 870
            EFEMKDLGAAKKILGM I+R+R  G+L +SQ+ Y+EKVL RF M D+K V+T L A FRL
Sbjct: 946  EFEMKDLGAAKKILGMEITRERHSGKLYLSQKCYIEKVLHRFNMHDAKLVSTLLAAHFRL 1005

Query: 869  TALQSPTTEVEKEYMANVPYASAVGSLMYAMVCTRPDIAHAVSMVSRYMSNPGKQHWLAV 690
            ++   P +  + EYM+ VPY+SAV SLMYAMVC+RPD++HA+S+VSRYM+NPGK+HW AV
Sbjct: 1006 SSDLCPQSAYDIEYMSRVPYSSAVSSLMYAMVCSRPDLSHALSVVSRYMANPGKEHWKAV 1065

Query: 689  KWVLRYLRGTVGKGLVYQRTTRPCIRGFVDADYAGDLDRRRSTTGFSFVLGDGPICWRSM 510
            +W+ RYLRGT    L + R++   + G+VD+D+AGDLDRRRS TG+ F +G   + W++ 
Sbjct: 1066 QWIFRYLRGTSSACLQFGRSSDGLV-GYVDSDFAGDLDRRRSLTGYVFTVGGCAVSWKAS 1124

Query: 509  LQSVVALSTTEAEYMAVTEAVKEAIWLQNLISELGVRQQVISVSCDNQSAIHLAKNQVHH 330
            LQ+ VALSTTEAEYMA++EA KE IWL+ L +EL      I++ CD+QSAI L K+Q+ H
Sbjct: 1125 LQATVALSTTEAEYMAISEACKEVIWLRGLYTELCGVTSCINIFCDSQSAICLTKDQMFH 1184

Query: 329  ARTKHIDVRYHFIRDEIEKKIVHLEKVDTAHNPADMLTKVVGGVKFEHCLNLLHIS 162
             RTKHID+RYHFIR  I +  V + K+ T  NP DM+TK V   KFE C +L+ ++
Sbjct: 1185 ERTKHIDLRYHFIRGVIAEGDVKVCKISTHDNPVDMMTKPVPATKFELCSSLVGVT 1240


>gb|AAT44257.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1211

 Score =  505 bits (1301), Expect = e-140
 Identities = 256/416 (61%), Positives = 320/416 (76%)
 Frame = -2

Query: 1409 AQYDMELEQMDVKTAFLHGDLEEDIYMSQPDGFVVAGKEDHVCRLKKSLYGLKQSPRQWY 1230
            A +D ELEQMDVKTAFLHG+LEEDIYM QP+GFVV GKE+ V RLKKSLYGLKQSPRQWY
Sbjct: 797  AVHDYELEQMDVKTAFLHGELEEDIYMEQPEGFVVPGKENLVYRLKKSLYGLKQSPRQWY 856

Query: 1229 LRFDRFMVKQRYKRSEYDHCVYYKKLNSGSYIYLLLYVDDMLIAAKSKHDIDLLKDQLSK 1050
             RFD FM  Q+++RS YD CVY K ++ GS IYLLLYVDDMLIAAK K +I+ LK QLS 
Sbjct: 857  KRFDSFMFSQKFRRSNYDSCVYLKVVD-GSSIYLLLYVDDMLIAAKDKSEIEKLKAQLSS 915

Query: 1049 EFEMKDLGAAKKILGMVISRDRKLGRLTVSQRDYVEKVLSRFGMSDSKPVTTPLGAQFRL 870
            EFEMKDLGAAKKILGM I+R+R  G+L +SQ+ Y+EKVL RF M D+KPV+TPL A FRL
Sbjct: 916  EFEMKDLGAAKKILGMEITRERHSGKLYLSQKGYIEKVLRRFNMHDAKPVSTPLAAHFRL 975

Query: 869  TALQSPTTEVEKEYMANVPYASAVGSLMYAMVCTRPDIAHAVSMVSRYMSNPGKQHWLAV 690
            ++   P ++ + EYM+ VPY S VGSLMYAMVC+R D++HA+S+VSRYM+NPGK+HW  V
Sbjct: 976  SSDLCPQSDYDIEYMSRVPYLSVVGSLMYAMVCSRLDLSHALSVVSRYMANPGKEHWKVV 1035

Query: 689  KWVLRYLRGTVGKGLVYQRTTRPCIRGFVDADYAGDLDRRRSTTGFSFVLGDGPICWRSM 510
            +W+ +YLRGT    L + R +R  + G+VD+D+AGDLDRRRS TG+ F +G   + W++ 
Sbjct: 1036 QWIFKYLRGTSSACLQFGR-SRDGLVGYVDSDFAGDLDRRRSLTGYVFTIGGCAVSWKAS 1094

Query: 509  LQSVVALSTTEAEYMAVTEAVKEAIWLQNLISELGVRQQVISVSCDNQSAIHLAKNQVHH 330
            LQ+ VALSTTE EYMA++EA KEAIWL+ L +EL      I++ CD+QSAI   K+Q+ H
Sbjct: 1095 LQATVALSTTEVEYMAISEACKEAIWLRGLYTELCGVTSCINIFCDSQSAICFTKDQMFH 1154

Query: 329  ARTKHIDVRYHFIRDEIEKKIVHLEKVDTAHNPADMLTKVVGGVKFEHCLNLLHIS 162
             RTKHIDVRYHFIR  I +  V + K+ T  NPADM+TK V   KFE C +L+ ++
Sbjct: 1155 ERTKHIDVRYHFIRGVIAEGDVKVCKISTHDNPADMMTKPVPTTKFELCSSLVGVT 1210


>gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|53370655|gb|AAU89150.1| integrase core domain
            containing protein [Oryza sativa Japonica Group]
            gi|108710286|gb|ABF98081.1| retrotransposon protein,
            putative, Ty1-copia subclass [Oryza sativa Japonica
            Group]
          Length = 1322

 Score =  505 bits (1301), Expect = e-140
 Identities = 246/413 (59%), Positives = 320/413 (77%)
 Frame = -2

Query: 1403 YDMELEQMDVKTAFLHGDLEEDIYMSQPDGFVVAGKEDHVCRLKKSLYGLKQSPRQWYLR 1224
            +D+ELEQ+DVKT FLHG+LEE+IYM QP+GF+V GKED+VC+LK+SLYGLKQSPRQWY R
Sbjct: 910  HDLELEQLDVKTTFLHGELEEEIYMDQPEGFIVPGKEDYVCKLKRSLYGLKQSPRQWYKR 969

Query: 1223 FDRFMVKQRYKRSEYDHCVYYKKLNSGSYIYLLLYVDDMLIAAKSKHDIDLLKDQLSKEF 1044
            FD FM+   +KRSE+D CVY K +N GS IYLLLYVDDMLIAAKSK  I  LK QLS EF
Sbjct: 970  FDSFMLSHGFKRSEFDSCVYIKFVN-GSPIYLLLYVDDMLIAAKSKEQITTLKKQLSSEF 1028

Query: 1043 EMKDLGAAKKILGMVISRDRKLGRLTVSQRDYVEKVLSRFGMSDSKPVTTPLGAQFRLTA 864
            +MKDLGAAKKILGM I+RDR  G L +SQ+ Y++KVL RF M D+KPV+TP+   F+L+A
Sbjct: 1029 DMKDLGAAKKILGMEITRDRNSGLLFLSQQSYIKKVLQRFNMHDAKPVSTPIAPHFKLSA 1088

Query: 863  LQSPTTEVEKEYMANVPYASAVGSLMYAMVCTRPDIAHAVSMVSRYMSNPGKQHWLAVKW 684
            LQ  +T+ + EYM+ VPY+SAVGSLMYAMVC+ PD++HA+S+VSRYM+NPGK+HW AV+W
Sbjct: 1089 LQCASTDEDVEYMSRVPYSSAVGSLMYAMVCSWPDLSHAMSLVSRYMANPGKEHWKAVQW 1148

Query: 683  VLRYLRGTVGKGLVYQRTTRPCIRGFVDADYAGDLDRRRSTTGFSFVLGDGPICWRSMLQ 504
            + RYLRGT    L + R  +  + G+VD+D+A DLD+RRS TG+ F +G   + W++ LQ
Sbjct: 1149 IFRYLRGTADACLKFGRIDKGLV-GYVDSDFAADLDKRRSLTGYVFTIGSCAVSWKATLQ 1207

Query: 503  SVVALSTTEAEYMAVTEAVKEAIWLQNLISELGVRQQVISVSCDNQSAIHLAKNQVHHAR 324
             VVA STTEAEYMA+ EA KE++WL+ L +EL      I++ CD+QSAI L K+Q+ H R
Sbjct: 1208 PVVAQSTTEAEYMAIAEACKESVWLKGLFAELCGVDSCINLFCDSQSAICLTKDQMFHER 1267

Query: 323  TKHIDVRYHFIRDEIEKKIVHLEKVDTAHNPADMLTKVVGGVKFEHCLNLLHI 165
            TKHID++YH++RD + +  + + K+    NPADM+TK +   KFE C +L+ I
Sbjct: 1268 TKHIDIKYHYVRDIVAQGKLKVCKISIHDNPADMMTKPIPVAKFELCSSLVGI 1320


>gb|AAT01387.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|48475101|gb|AAT44170.1| putative polyprotein [Oryza
            sativa Japonica Group]
          Length = 1175

 Score =  496 bits (1277), Expect = e-137
 Identities = 244/415 (58%), Positives = 318/415 (76%)
 Frame = -2

Query: 1409 AQYDMELEQMDVKTAFLHGDLEEDIYMSQPDGFVVAGKEDHVCRLKKSLYGLKQSPRQWY 1230
            A +D+ELEQ+DVKTAFLHG+LEE+IYM QP+GF+V GKED+VC+LK+SLYGLKQSPRQWY
Sbjct: 761  AMHDLELEQLDVKTAFLHGELEEEIYMDQPEGFIVPGKEDYVCKLKRSLYGLKQSPRQWY 820

Query: 1229 LRFDRFMVKQRYKRSEYDHCVYYKKLNSGSYIYLLLYVDDMLIAAKSKHDIDLLKDQLSK 1050
             RFD FM+   +KRSE+D CVY K +N  S IYLLLYVDDMLIAAKSK  I  LK QLS 
Sbjct: 821  KRFDSFMLSHGFKRSEFDSCVYIKFVNV-SPIYLLLYVDDMLIAAKSKEQITTLKKQLSS 879

Query: 1049 EFEMKDLGAAKKILGMVISRDRKLGRLTVSQRDYVEKVLSRFGMSDSKPVTTPLGAQFRL 870
            EF+MKDL AAKKILGM I+RDR  G L +SQ+ Y++KVL RF M D+KPV+T +   F+L
Sbjct: 880  EFDMKDLDAAKKILGMEITRDRNSGWLFLSQQSYIKKVLQRFNMHDTKPVSTHIAPHFKL 939

Query: 869  TALQSPTTEVEKEYMANVPYASAVGSLMYAMVCTRPDIAHAVSMVSRYMSNPGKQHWLAV 690
            +ALQ  +T+ + EYM+ VPY+S VGSLMYAMVC+R D++HA+S+VSRYM+NPGK+HW A+
Sbjct: 940  SALQCASTDEDVEYMSRVPYSSVVGSLMYAMVCSRLDLSHAMSLVSRYMANPGKEHWKAI 999

Query: 689  KWVLRYLRGTVGKGLVYQRTTRPCIRGFVDADYAGDLDRRRSTTGFSFVLGDGPICWRSM 510
            +W+ RYLR T    L + RT +  I G+VD+D+A DLD+RRS TG+ F +G   + W++ 
Sbjct: 1000 QWIFRYLRDTANACLKFGRTNKGLI-GYVDSDFAADLDKRRSLTGYVFTIGSCAVSWKAT 1058

Query: 509  LQSVVALSTTEAEYMAVTEAVKEAIWLQNLISELGVRQQVISVSCDNQSAIHLAKNQVHH 330
            L+ VVA STTEAEYMA+ EA KE++WL+ L +EL      I++ CD+QSAI L K+Q+ H
Sbjct: 1059 LRHVVAQSTTEAEYMAIAEACKESVWLKGLFAELCGVYSCINLFCDSQSAICLTKDQMFH 1118

Query: 329  ARTKHIDVRYHFIRDEIEKKIVHLEKVDTAHNPADMLTKVVGGVKFEHCLNLLHI 165
             RTKHID++YH++RD + +  + + K+ T  NP DM+TK V   KFE C +L+ I
Sbjct: 1119 ERTKHIDIKYHYVRDVVAQGKLKVCKISTHDNPVDMMTKHVPVAKFELCSSLVGI 1173


>gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group] gi|77549942|gb|ABA92739.1|
            retrotransposon protein, putative, Ty1-copia subclass
            [Oryza sativa Japonica Group]
          Length = 1373

 Score =  496 bits (1276), Expect = e-137
 Identities = 243/379 (64%), Positives = 304/379 (80%)
 Frame = -2

Query: 1409 AQYDMELEQMDVKTAFLHGDLEEDIYMSQPDGFVVAGKEDHVCRLKKSLYGLKQSPRQWY 1230
            A +D+ELEQ+DVKTAFLHG+LEEDIYM QP+GF+V GKE +VC+LK+SLYGLKQSPRQW 
Sbjct: 919  ASHDLELEQLDVKTAFLHGELEEDIYMDQPEGFIVPGKEKYVCKLKRSLYGLKQSPRQWN 978

Query: 1229 LRFDRFMVKQRYKRSEYDHCVYYKKLNSGSYIYLLLYVDDMLIAAKSKHDIDLLKDQLSK 1050
             RFD FM+   +KRS+YD CVY K +N GS IYLLLYVDDMLIAAKSK +I  LK  LS 
Sbjct: 979  KRFDSFMLSHSFKRSKYDSCVYIKHVN-GSPIYLLLYVDDMLIAAKSKIEITKLKKLLSS 1037

Query: 1049 EFEMKDLGAAKKILGMVISRDRKLGRLTVSQRDYVEKVLSRFGMSDSKPVTTPLGAQFRL 870
            EF+MKDLG+AKKILGM ISRDRK G L +SQ +Y++KVL RF M ++K V+TP+   F+L
Sbjct: 1038 EFDMKDLGSAKKILGMEISRDRKSGLLFLSQHNYIKKVLQRFNMQNAKAVSTPIAPHFKL 1097

Query: 869  TALQSPTTEVEKEYMANVPYASAVGSLMYAMVCTRPDIAHAVSMVSRYMSNPGKQHWLAV 690
            +A Q P+ + E EYM+ VPY+SAVGSLMYAMVC+RPD+++A+S+VSRYMSNPGK+HW AV
Sbjct: 1098 SAAQCPSIDAEIEYMSRVPYSSAVGSLMYAMVCSRPDLSYAMSLVSRYMSNPGKEHWRAV 1157

Query: 689  KWVLRYLRGTVGKGLVYQRTTRPCIRGFVDADYAGDLDRRRSTTGFSFVLGDGPICWRSM 510
            +W+ RYLRGT    L + RT +  I G+VD+DYA DLDRRRS TG+ F +G   + WR+ 
Sbjct: 1158 QWIFRYLRGTTYSCLKFGRTDKGLI-GYVDSDYAADLDRRRSLTGYVFTIGSCAVSWRAT 1216

Query: 509  LQSVVALSTTEAEYMAVTEAVKEAIWLQNLISELGVRQQVISVSCDNQSAIHLAKNQVHH 330
            LQSVVALSTTEAEYMA+ EA KE IWL+ L +EL   +  IS+ CD++SAI+L K+Q+ H
Sbjct: 1217 LQSVVALSTTEAEYMAICEACKELIWLKGLYAELSGVESCISLHCDSESAIYLTKDQMFH 1276

Query: 329  ARTKHIDVRYHFIRDEIEK 273
             RTKHID++YHF+RD IE+
Sbjct: 1277 ERTKHIDIKYHFVRDVIEE 1295


>emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis]
          Length = 1334

 Score =  494 bits (1272), Expect = e-137
 Identities = 254/417 (60%), Positives = 312/417 (74%), Gaps = 2/417 (0%)
 Frame = -2

Query: 1409 AQYDMELEQMDVKTAFLHGDLEEDIYMSQPDGFVVAGKEDHVCRLKKSLYGLKQSPRQWY 1230
            A  D+ELEQMDVKTAFLHG+LEE I M+QP+GF    KED+VC L KSLYGLKQSPRQWY
Sbjct: 916  ALLDLELEQMDVKTAFLHGNLEEQILMAQPEGFECKDKEDYVCLLHKSLYGLKQSPRQWY 975

Query: 1229 LRFDRFMVKQRYKRSEYDHCVYYKKLNSGSYIYLLLYVDDMLIAAKSKHDIDLLKDQLSK 1050
             RFD FMV + Y+RS YD CVY+   + G   YLLLYVDDMLIA+K K +I+ LK+ L  
Sbjct: 976  RRFDDFMVSKGYRRSRYDSCVYFGGSDQGGVAYLLLYVDDMLIASKYKSEIERLKNLLKA 1035

Query: 1049 EFEMKDLGAAKKILGMVISRDRKLGRLTVSQRDYVEKVLSRFGMSDSKPVTTPLGAQFRL 870
            EFEMKDLG AK+ILGM I RDR  G L +SQ  Y++KVL RF M D KPV TPLG QF+L
Sbjct: 1036 EFEMKDLGNAKRILGMDIIRDRSAGTLFLSQGKYIKKVLERFEMQDCKPVQTPLGPQFKL 1095

Query: 869  TALQSPTTEVEKEYMANVPYASAVGSLMYAMVCTRPDIAHAVSMVSRYMSNPGKQHWLAV 690
            +A    TT  ++  M   PYA AVGSLMYAMVCTR DIA+AVS+VSRY+S PGK HW AV
Sbjct: 1096 SA---ATTSEDESQMNEFPYAQAVGSLMYAMVCTRSDIAYAVSVVSRYLSCPGKVHWNAV 1152

Query: 689  KWVLRYLRGTVGKGLVYQRTTRPCIR--GFVDADYAGDLDRRRSTTGFSFVLGDGPICWR 516
            KW++RYL+G+   GL+Y +T    I   GFVD+D+AGDLDRR+ST+ + FVL    I W+
Sbjct: 1153 KWIMRYLKGSSTCGLLYGKTKSDKIEVMGFVDSDFAGDLDRRKSTSRYMFVLNSCLISWK 1212

Query: 515  SMLQSVVALSTTEAEYMAVTEAVKEAIWLQNLISELGVRQQVISVSCDNQSAIHLAKNQV 336
            S LQS  ALS+TEAE++A TEAVKEA+WL+ L++EL + Q+++ V CDNQ+AIHL KNQ+
Sbjct: 1213 SSLQSGGALSSTEAEFIATTEAVKEAMWLRGLLNELWLNQKIVQVFCDNQNAIHLVKNQM 1272

Query: 335  HHARTKHIDVRYHFIRDEIEKKIVHLEKVDTAHNPADMLTKVVGGVKFEHCLNLLHI 165
            +H RTKHIDV+  FIRDE+ K  V + K+ T+ NPAD LTK +   KFE C+NL+ I
Sbjct: 1273 YHERTKHIDVKLQFIRDEVGKGTVVVSKIHTSVNPADALTKSLPTAKFEFCVNLMGI 1329


>gb|AAW22873.1| putative polyprotein [Solanum lycopersicum]
          Length = 687

 Score =  494 bits (1272), Expect = e-137
 Identities = 243/413 (58%), Positives = 308/413 (74%)
 Frame = -2

Query: 1400 DMELEQMDVKTAFLHGDLEEDIYMSQPDGFVVAGKEDHVCRLKKSLYGLKQSPRQWYLRF 1221
            ++ELEQ+DVKTAFLHGDL E+IYM QP+GF V GKE+ VC+LKKSLYGLKQ+PRQWY +F
Sbjct: 275  NLELEQLDVKTAFLHGDLHEEIYMEQPEGFEVKGKENFVCKLKKSLYGLKQAPRQWYHKF 334

Query: 1220 DRFMVKQRYKRSEYDHCVYYKKLNSGSYIYLLLYVDDMLIAAKSKHDIDLLKDQLSKEFE 1041
            D FM    YKR+  D CVY++K + G++I L LYVDDMLI  +    I  LK+ LSK F+
Sbjct: 335  DSFMSNNEYKRTTADPCVYFRKFSEGNFIILCLYVDDMLIVGQDVEMICRLKEDLSKSFD 394

Query: 1040 MKDLGAAKKILGMVISRDRKLGRLTVSQRDYVEKVLSRFGMSDSKPVTTPLGAQFRLTAL 861
            MKDLG AK+ILGM I+RDRK G+L +SQ +Y+E+VL RF M ++KPV TPL A F+L+  
Sbjct: 395  MKDLGPAKQILGMEIARDRKAGKLWLSQENYIERVLERFNMKNAKPVNTPLAAHFKLSKR 454

Query: 860  QSPTTEVEKEYMANVPYASAVGSLMYAMVCTRPDIAHAVSMVSRYMSNPGKQHWLAVKWV 681
              PTTE EKE M+++PY+S VGSLMYAMVCTRPDIAHAV +VSRY++NP K HW AVKW+
Sbjct: 455  CCPTTEKEKESMSHIPYSSVVGSLMYAMVCTRPDIAHAVGLVSRYLANPSKVHWEAVKWI 514

Query: 680  LRYLRGTVGKGLVYQRTTRPCIRGFVDADYAGDLDRRRSTTGFSFVLGDGPICWRSMLQS 501
            LRYLRGT    L +     P + GF DAD AGDLD R+ST+G+ F    G I W+S LQ 
Sbjct: 515  LRYLRGTSNLSLCF-GGGEPILEGFTDADMAGDLDNRKSTSGYLFKFARGAISWQSKLQK 573

Query: 500  VVALSTTEAEYMAVTEAVKEAIWLQNLISELGVRQQVISVSCDNQSAIHLAKNQVHHART 321
             VALSTTE EY+A  EA KE +WL+  + ELG++Q    V CD++SA+ L+KN ++HART
Sbjct: 574  CVALSTTEVEYIAAVEASKEMLWLKRFLQELGLKQSEYVVFCDSKSAMDLSKNIMYHART 633

Query: 320  KHIDVRYHFIRDEIEKKIVHLEKVDTAHNPADMLTKVVGGVKFEHCLNLLHIS 162
            KHIDVRYH++R  I+++++ L+K+ T  N ADMLTKVV G K E C  L  +S
Sbjct: 634  KHIDVRYHWLRVVIKERLMKLKKIHTNKNGADMLTKVVPGSKLEFCSKLAGMS 686


>emb|CAN79684.1| hypothetical protein VITISV_003855 [Vitis vinifera]
          Length = 406

 Score =  493 bits (1268), Expect = e-136
 Identities = 243/405 (60%), Positives = 309/405 (76%), Gaps = 2/405 (0%)
 Frame = -2

Query: 1382 MDVKTAFLHGDLEEDIYMSQPDGFVVAGKEDHVCRLKKSLYGLKQSPRQWYLRFDRFMVK 1203
            MDVKT FLHGDLEE +YM Q +GF+  G+E  V +LKKSLYGLKQSPRQWY RFD +M+K
Sbjct: 1    MDVKTTFLHGDLEELVYMVQLEGFIQLGQEHLVYKLKKSLYGLKQSPRQWYKRFDSYMIK 60

Query: 1202 QRYKRSEYDHCVYYKKLNS-GSYIYLLLYVDDMLIAAKSKHDIDLLKDQLSKEFEMKDLG 1026
              YKR EYD CVY K L+   S+I+LLLYVDDMLI  KS  +++ LK  LSKEF+MKDLG
Sbjct: 61   TSYKRCEYDCCVYVKSLDDDSSFIFLLLYVDDMLIVVKSMVEVNKLKSLLSKEFDMKDLG 120

Query: 1025 AAKKILGMVISRDRKLGRLTVSQRDYVEKVLSRFGMSDSKPVTTPLGAQFRLTALQSPTT 846
              KKI+G+ I RDR LGRL +SQ +YV+++L RF M ++KPV+TPL   FRL+  Q P T
Sbjct: 121  VTKKIIGIEIHRDRALGRLWLSQHNYVKRMLERFNMDNAKPVSTPLANHFRLSTSQCPKT 180

Query: 845  EVEKEYMANVPYASAVGSLMYAMVCTRPDIAHAVSMVSRYMSNPGKQHWLAVKWVLRYLR 666
            + E   M+ VPYASAVG LMYAMVCTR D+AHAVS+VS+++SNPG+ +W AVKW+ RYLR
Sbjct: 181  DGEVNDMSKVPYASAVGCLMYAMVCTRLDLAHAVSVVSKFLSNPGRMNWDAVKWIFRYLR 240

Query: 665  GTVGKGLVY-QRTTRPCIRGFVDADYAGDLDRRRSTTGFSFVLGDGPICWRSMLQSVVAL 489
            GT   G+ + ++ + P ++G+VDADYAGDLD RRST G+ F LG GPICW+SM+QS+VAL
Sbjct: 241  GTTDYGITFSKQQSDPSVKGYVDADYAGDLDERRSTIGYVFTLGGGPICWKSMIQSLVAL 300

Query: 488  STTEAEYMAVTEAVKEAIWLQNLISELGVRQQVISVSCDNQSAIHLAKNQVHHARTKHID 309
             TT++EYMA+ E  KE++WL  L+ ELG++Q  + +  DNQSAI+L KNQV+HARTKHID
Sbjct: 301  YTTKSEYMAIAETTKESLWLTGLVKELGIQQGGVQLYFDNQSAIYLEKNQVYHARTKHID 360

Query: 308  VRYHFIRDEIEKKIVHLEKVDTAHNPADMLTKVVGGVKFEHCLNL 174
            VR+H I + +    + L+KV T+ N ADMLTK V   KF+HCL L
Sbjct: 361  VRFHKISELVSSGELLLKKVHTSENAADMLTKPVTTEKFKHCLKL 405


>emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera]
          Length = 1643

 Score =  491 bits (1265), Expect = e-136
 Identities = 249/411 (60%), Positives = 305/411 (74%), Gaps = 1/411 (0%)
 Frame = -2

Query: 1403 YDMELEQMDVKTAFLHGDLEEDIYMSQPDGFVVAGKEDHVCRLKKSLYGLKQSPRQWYLR 1224
            +++EL+Q+DVKTAFLHG+LEE+IYM QP+GFV + K DHVC LKKSLYGLKQSPRQWY R
Sbjct: 1219 FNLELDQLDVKTAFLHGNLEEEIYMKQPEGFVDSEKSDHVCFLKKSLYGLKQSPRQWYKR 1278

Query: 1223 FDRFMVKQRYKRSEYDHCVYYKKLNSGSYIYLLLYVDDMLIAAKSKHDIDLLKDQLSKEF 1044
            FD FMV   + R++YD CVY+K L  GS+IYLLLYVDDMLIAAK++ +I+ LK  LS EF
Sbjct: 1279 FDAFMVSHEFMRNQYDSCVYFKTLPDGSFIYLLLYVDDMLIAAKNRAEINKLKQLLSSEF 1338

Query: 1043 EMKDLGAAKKILGMVISRDRKLGRLTVSQRDYVEKVLSRFGMSDSKPVTTPLGAQFRLTA 864
            EMKDLGAAKKILGM I RDR  G L VSQ+ Y+EK++  F M  SKPV+TPL   F+   
Sbjct: 1339 EMKDLGAAKKILGMEIWRDRDAGLLYVSQQKYIEKLMQAFHMDHSKPVSTPLAQHFKFDH 1398

Query: 863  LQSPTTEVEKEYMANVPYASAVGSLMYAMVCTRPDIAHAVSMVSRYMSNPGKQHWLAVKW 684
               P+T+ E EYM +VPY+S VGSLMYAMVCTRPD+A AVS+VSR+MSNPGK HW AVKW
Sbjct: 1399 STLPSTDEEVEYMKSVPYSSVVGSLMYAMVCTRPDLAFAVSVVSRFMSNPGKAHWEAVKW 1458

Query: 683  VLRYLRGTVGKGLVY-QRTTRPCIRGFVDADYAGDLDRRRSTTGFSFVLGDGPICWRSML 507
            ++RYL+G+    LVY        + GF D+D+ GDL +RRS T + F L    I WR+ L
Sbjct: 1459 IMRYLKGSSSVCLVYGNGDVSSGLVGFTDSDHGGDLMKRRSLTCYIFTLFGCAISWRASL 1518

Query: 506  QSVVALSTTEAEYMAVTEAVKEAIWLQNLISELGVRQQVISVSCDNQSAIHLAKNQVHHA 327
            Q  VALSTTEAEYM++TE VKE +WL   +  LG+      + CD+QSA+ LAKN V+H 
Sbjct: 1519 QPTVALSTTEAEYMSLTEGVKEGMWLNGFLGSLGLNLSKPVIYCDSQSALCLAKNPVYHE 1578

Query: 326  RTKHIDVRYHFIRDEIEKKIVHLEKVDTAHNPADMLTKVVGGVKFEHCLNL 174
            RTKHIDVR +FIRD IE+K+  +EKV T  NPADMLTK +   KF+H L L
Sbjct: 1579 RTKHIDVRLNFIRDVIEEKLFSIEKVATEVNPADMLTKPITTEKFKHSLGL 1629


>sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol polyprotein from transposon TNT
            1-94; Includes: RecName: Full=Protease; Includes:
            RecName: Full=Reverse transcriptase; Includes: RecName:
            Full=Endonuclease gi|20045|emb|CAA32025.1| unnamed
            protein product [Nicotiana tabacum]
          Length = 1328

 Score =  490 bits (1262), Expect = e-136
 Identities = 242/413 (58%), Positives = 306/413 (74%)
 Frame = -2

Query: 1409 AQYDMELEQMDVKTAFLHGDLEEDIYMSQPDGFVVAGKEDHVCRLKKSLYGLKQSPRQWY 1230
            A  D+E+EQ+DVKTAFLHGDLEE+IYM QP+GF VAGK+  VC+L KSLYGLKQ+PRQWY
Sbjct: 912  ASLDLEVEQLDVKTAFLHGDLEEEIYMEQPEGFEVAGKKHMVCKLNKSLYGLKQAPRQWY 971

Query: 1229 LRFDRFMVKQRYKRSEYDHCVYYKKLNSGSYIYLLLYVDDMLIAAKSKHDIDLLKDQLSK 1050
            ++FD FM  Q Y ++  D CVY+K+ +  ++I LLLYVDDMLI  K K  I  LK  LSK
Sbjct: 972  MKFDSFMKSQTYLKTYSDPCVYFKRFSENNFIILLLYVDDMLIVGKDKGLIAKLKGDLSK 1031

Query: 1049 EFEMKDLGAAKKILGMVISRDRKLGRLTVSQRDYVEKVLSRFGMSDSKPVTTPLGAQFRL 870
             F+MKDLG A++ILGM I R+R   +L +SQ  Y+E+VL RF M ++KPV+TPL    +L
Sbjct: 1032 SFDMKDLGPAQQILGMKIVRERTSRKLWLSQEKYIERVLERFNMKNAKPVSTPLAGHLKL 1091

Query: 869  TALQSPTTEVEKEYMANVPYASAVGSLMYAMVCTRPDIAHAVSMVSRYMSNPGKQHWLAV 690
            +    PTT  EK  MA VPY+SAVGSLMYAMVCTRPDIAHAV +VSR++ NPGK+HW AV
Sbjct: 1092 SKKMCPTTVEEKGNMAKVPYSSAVGSLMYAMVCTRPDIAHAVGVVSRFLENPGKEHWEAV 1151

Query: 689  KWVLRYLRGTVGKGLVYQRTTRPCIRGFVDADYAGDLDRRRSTTGFSFVLGDGPICWRSM 510
            KW+LRYLRGT G  L +  +  P ++G+ DAD AGD+D R+S+TG+ F    G I W+S 
Sbjct: 1152 KWILRYLRGTTGDCLCFGGSD-PILKGYTDADMAGDIDNRKSSTGYLFTFSGGAISWQSK 1210

Query: 509  LQSVVALSTTEAEYMAVTEAVKEAIWLQNLISELGVRQQVISVSCDNQSAIHLAKNQVHH 330
            LQ  VALSTTEAEY+A TE  KE IWL+  + ELG+ Q+   V CD+QSAI L+KN ++H
Sbjct: 1211 LQKCVALSTTEAEYIAATETGKEMIWLKRFLQELGLHQKEYVVYCDSQSAIDLSKNSMYH 1270

Query: 329  ARTKHIDVRYHFIRDEIEKKIVHLEKVDTAHNPADMLTKVVGGVKFEHCLNLL 171
            ARTKHIDVRYH+IR+ ++ + + + K+ T  NPADMLTKVV   KFE C  L+
Sbjct: 1271 ARTKHIDVRYHWIREMVDDESLKVLKISTNENPADMLTKVVPRNKFELCKELV 1323


>emb|CAN74702.1| hypothetical protein VITISV_023139 [Vitis vinifera]
          Length = 1222

 Score =  487 bits (1254), Expect = e-135
 Identities = 245/409 (59%), Positives = 311/409 (76%)
 Frame = -2

Query: 1409 AQYDMELEQMDVKTAFLHGDLEEDIYMSQPDGFVVAGKEDHVCRLKKSLYGLKQSPRQWY 1230
            A  ++ LEQ+DVKTAFLHGDLEED+YM QP+GF+V G+E+ VC+L+KSLYGLKQ+PRQWY
Sbjct: 808  AAENLHLEQLDVKTAFLHGDLEEDLYMIQPEGFIVQGQENLVCKLRKSLYGLKQAPRQWY 867

Query: 1229 LRFDRFMVKQRYKRSEYDHCVYYKKLNSGSYIYLLLYVDDMLIAAKSKHDIDLLKDQLSK 1050
             +FD FM +  +KR E DHC Y K  ++ SYI LLLYVDDMLI       I+ LK QLSK
Sbjct: 868  KKFDNFMHRIGFKRCEADHCCYVKSFDN-SYIILLLYVDDMLIVGSDIEKINNLKKQLSK 926

Query: 1049 EFEMKDLGAAKKILGMVISRDRKLGRLTVSQRDYVEKVLSRFGMSDSKPVTTPLGAQFRL 870
            +F MKDLGAAK+ILGM I RD+  G L +SQ +YV+KVLSRF M+++KPV+TPLG+ F+L
Sbjct: 927  QFAMKDLGAAKQILGMRIIRDKANGTLKLSQSEYVKKVLSRFNMNEAKPVSTPLGSHFKL 986

Query: 869  TALQSPTTEVEKEYMANVPYASAVGSLMYAMVCTRPDIAHAVSMVSRYMSNPGKQHWLAV 690
            +  QSP TE E+++M+ VPYASA+GSLMYAMVCTRPDIAHAV +VSR+MS PGKQHW AV
Sbjct: 987  SKEQSPKTEEERDHMSKVPYASAIGSLMYAMVCTRPDIAHAVGVVSRFMSRPGKQHWEAV 1046

Query: 689  KWVLRYLRGTVGKGLVYQRTTRPCIRGFVDADYAGDLDRRRSTTGFSFVLGDGPICWRSM 510
            KW+LRYL+G++   L +   +   ++G+VDAD+AGD+D R+STTGF F LG   I W S 
Sbjct: 1047 KWILRYLKGSLDTCLCFTGASLK-LQGYVDADFAGDIDSRKSTTGFVFTLGGTAISWTSN 1105

Query: 509  LQSVVALSTTEAEYMAVTEAVKEAIWLQNLISELGVRQQVISVSCDNQSAIHLAKNQVHH 330
            LQ +V LSTTEAEY+A TEA KE IWL   + ELG +Q++  +  D+QSAI LAKN   H
Sbjct: 1106 LQKIVTLSTTEAEYVAATEAGKEMIWLHGFLDELGKKQEMGILHSDSQSAIFLAKNSAFH 1165

Query: 329  ARTKHIDVRYHFIRDEIEKKIVHLEKVDTAHNPADMLTKVVGGVKFEHC 183
            +++KHI  +YHFIR  +E K+V LEK+  + NPADMLTK V   K + C
Sbjct: 1166 SKSKHIQTKYHFIRYLVEDKLVILEKICGSKNPADMLTKGVTIEKLKLC 1214


>dbj|BAB09923.1| copia-like retrotransposable element [Arabidopsis thaliana]
          Length = 1342

 Score =  484 bits (1247), Expect = e-134
 Identities = 242/415 (58%), Positives = 305/415 (73%)
 Frame = -2

Query: 1406 QYDMELEQMDVKTAFLHGDLEEDIYMSQPDGFVVAGKEDHVCRLKKSLYGLKQSPRQWYL 1227
            Q+DMELEQ+DVKTAFLHG+L+E I MSQP+G+      + VC LKKSLYGLKQSPRQW  
Sbjct: 926  QFDMELEQLDVKTAFLHGNLDEYILMSQPEGYEDEDSTEKVCLLKKSLYGLKQSPRQWNQ 985

Query: 1226 RFDRFMVKQRYKRSEYDHCVYYKKLNSGSYIYLLLYVDDMLIAAKSKHDIDLLKDQLSKE 1047
            RFD FM+   Y+RS+Y+ CVY ++LN GSYIYLLLYVDDMLIA+++K  I  LK+ L++E
Sbjct: 986  RFDSFMINSGYQRSKYNPCVYTQQLNDGSYIYLLLYVDDMLIASQNKDQIQKLKESLNRE 1045

Query: 1046 FEMKDLGAAKKILGMVISRDRKLGRLTVSQRDYVEKVLSRFGMSDSKPVTTPLGAQFRLT 867
            FEMKDLG A+KILGM I+R+R+ G L +SQ +YV  VL  FGM  SK   TPLGA F+L 
Sbjct: 1046 FEMKDLGPARKILGMEITRNREQGILDLSQSEYVAGVLRAFGMDQSKVSQTPLGAHFKLR 1105

Query: 866  ALQSPTTEVEKEYMANVPYASAVGSLMYAMVCTRPDIAHAVSMVSRYMSNPGKQHWLAVK 687
            A    T   + EYM  VPY +A+GS+MY+M+ +RPD+A+ V +VSR+MS P K+HW AVK
Sbjct: 1106 AANEKTLARDAEYMKLVPYPNAIGSIMYSMIGSRPDLAYPVGVVSRFMSKPSKEHWQAVK 1165

Query: 686  WVLRYLRGTVGKGLVYQRTTRPCIRGFVDADYAGDLDRRRSTTGFSFVLGDGPICWRSML 507
            WV+RY++GT    L +++  +  IRG+ D+DYA DLDRRRS TGF F  G   I W+S L
Sbjct: 1166 WVMRYMKGTQDTCLRFKKDDKFEIRGYCDSDYATDLDRRRSITGFVFTAGGNTISWKSGL 1225

Query: 506  QSVVALSTTEAEYMAVTEAVKEAIWLQNLISELGVRQQVISVSCDNQSAIHLAKNQVHHA 327
            Q VVALSTTEAEYMA+ EAVKEAIWL+ L +E+G  Q  + V CD+QSAI L+KN VHH 
Sbjct: 1226 QRVVALSTTEAEYMALAEAVKEAIWLRGLAAEMGFEQDAVEVMCDSQSAIALSKNSVHHE 1285

Query: 326  RTKHIDVRYHFIRDEIEKKIVHLEKVDTAHNPADMLTKVVGGVKFEHCLNLLHIS 162
            RTKHIDVRYHFIR++I    + + K+ T  NPAD+ TK V   K +  L LL +S
Sbjct: 1286 RTKHIDVRYHFIREKIADGEIQVVKISTTWNPADIFTKTVPVSKLQEALKLLRVS 1340


>gb|ABG22121.1| polyprotein [Solanum melongena]
          Length = 361

 Score =  483 bits (1244), Expect = e-134
 Identities = 241/362 (66%), Positives = 293/362 (80%), Gaps = 3/362 (0%)
 Frame = -2

Query: 1379 DVKTAFLHGDLEEDIYMSQPDGFVVAGKEDHVCRLKKSLYGLKQSPRQWYLRFDRFMVKQ 1200
            DVKTAF HGDL+E+IY     G  VA KE+ VC+L KSLY +KQS RQWY +FD+FM  Q
Sbjct: 1    DVKTAFFHGDLKEEIYYDFSQGIKVASKENWVCKLNKSLY-MKQSSRQWYKQFDKFMQDQ 59

Query: 1199 RYKRSEYDHCVYYKKLNSGSYIYLLLYVDDMLIAAKSKHDIDLLKDQLSKEFEMKDLGAA 1020
            RY RS+YDHCVY+ KL +GSY+YLLLYVDDMLIAAKS+ +ID LK QLSKEFEMKDLG A
Sbjct: 60   RYTRSKYDHCVYFHKLQNGSYVYLLLYVDDMLIAAKSQFEIDRLKAQLSKEFEMKDLGEA 119

Query: 1019 KKILGMVISRDRKLGRLTVSQRDYVEKVLSRFGMS-DSKPVTTPLGAQFRLTALQSPTTE 843
            KKILGM ISRDR+ G+L ++Q+ Y++KVL RFG++ DSKPV+TPL    +L++  SP T+
Sbjct: 120  KKILGMEISRDRQRGKLCLTQKQYLKKVLQRFGINDDSKPVSTPLAPHLKLSSQLSPKTD 179

Query: 842  VEKEYMANVPYASAVGSLMYAMVCTRPDIAHAVSMVSRYMSNPGKQHWLAVKWVLRYLRG 663
             E+EYMA VPYA+AVGSLMYAMVCTR DI+ AVS+VSRYM +PGK HW AVKW+LRY++ 
Sbjct: 180  EEREYMAKVPYANAVGSLMYAMVCTRSDISQAVSVVSRYMHDPGKGHWQAVKWILRYIKN 239

Query: 662  TVGKGLVYQ--RTTRPCIRGFVDADYAGDLDRRRSTTGFSFVLGDGPICWRSMLQSVVAL 489
            TV  GLV++  ++   C+ G+ D+DYAGDLD+RRSTTG+ F L  GP+ W+S LQ+ VAL
Sbjct: 240  TVDIGLVFEQDKSLGSCVVGYCDSDYAGDLDKRRSTTGYLFTLAKGPVSWKSTLQATVAL 299

Query: 488  STTEAEYMAVTEAVKEAIWLQNLISELGVRQQVISVSCDNQSAIHLAKNQVHHARTKHID 309
            STTEAEYMA+TEAVKEAIWL  L+ ELGV Q+ + V  D+QSAIHLAKNQV HARTKHID
Sbjct: 300  STTEAEYMAITEAVKEAIWLHGLLEELGVGQKHLMVHSDSQSAIHLAKNQVFHARTKHID 359

Query: 308  VR 303
            VR
Sbjct: 360  VR 361


>emb|CAN62181.1| hypothetical protein VITISV_044399 [Vitis vinifera]
          Length = 1264

 Score =  483 bits (1243), Expect = e-134
 Identities = 243/406 (59%), Positives = 310/406 (76%)
 Frame = -2

Query: 1400 DMELEQMDVKTAFLHGDLEEDIYMSQPDGFVVAGKEDHVCRLKKSLYGLKQSPRQWYLRF 1221
            ++ LEQ+DVKTAFLHGDLEED+YM QP+GF+V G+E+ VC+L+KSLYGLKQ+PRQWY +F
Sbjct: 853  NLHLEQLDVKTAFLHGDLEEDLYMIQPEGFIVQGQENLVCKLRKSLYGLKQAPRQWYKKF 912

Query: 1220 DRFMVKQRYKRSEYDHCVYYKKLNSGSYIYLLLYVDDMLIAAKSKHDIDLLKDQLSKEFE 1041
            D FM +  +KR E DHC Y K  ++ SYI LLLYVDDMLIA      I+ LK QLSK+F 
Sbjct: 913  DNFMHRIGFKRCEADHCCYVKSFDN-SYIILLLYVDDMLIAGSDIEKINNLKKQLSKQFA 971

Query: 1040 MKDLGAAKKILGMVISRDRKLGRLTVSQRDYVEKVLSRFGMSDSKPVTTPLGAQFRLTAL 861
            MKDLGAAK+ILGM I R++  G L +SQ +YV+KVLSRF M+++KPV+TPLG+ F+L+  
Sbjct: 972  MKDLGAAKQILGMRIIRBKANGTLKLSQSEYVKKVLSRFNMNEAKPVSTPLGSHFKLSKE 1031

Query: 860  QSPTTEVEKEYMANVPYASAVGSLMYAMVCTRPDIAHAVSMVSRYMSNPGKQHWLAVKWV 681
            QSP TE E+++M+ VPYASA+GSLMYAMVCTRPDIAHAV +VSR+MS PGKQH  AVKW+
Sbjct: 1032 QSPKTEEERDHMSKVPYASAIGSLMYAMVCTRPDIAHAVGVVSRFMSRPGKQHXEAVKWI 1091

Query: 680  LRYLRGTVGKGLVYQRTTRPCIRGFVDADYAGDLDRRRSTTGFSFVLGDGPICWRSMLQS 501
            LRYL+G++   L +   +   ++G+VDAD+AGD+D R+STTGF F LG   I W S LQ 
Sbjct: 1092 LRYLKGSLDTCLCFTGASLK-LQGYVDADFAGDIDSRKSTTGFVFTLGGTXISWXSNLQK 1150

Query: 500  VVALSTTEAEYMAVTEAVKEAIWLQNLISELGVRQQVISVSCDNQSAIHLAKNQVHHART 321
            +V LSTTEAEY+A TEA KE IWL   + ELG +Q++  +  D+QSAI LAKN   H+++
Sbjct: 1151 IVTLSTTEAEYVAATEAGKEMIWLHGFLDELGKKQEMGILHSDSQSAIFLAKNSAFHSKS 1210

Query: 320  KHIDVRYHFIRDEIEKKIVHLEKVDTAHNPADMLTKVVGGVKFEHC 183
            KHI  +YHFIR  +E K+V LEK+  + NPADMLTK V   K + C
Sbjct: 1211 KHIQTKYHFIRYLVEDKLVILEKICGSKNPADMLTKGVTIEKLKLC 1256