BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia25_contig00031459
         (427 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAC02672.1| polyprotein [Arabidopsis arenosa]                       56   1e-10
gb|AAC02666.1| polyprotein [Arabidopsis thaliana]                      56   2e-10
gb|AAC02664.1| polyprotein [Arabidopsis thaliana]                      56   2e-10
gb|AAC02669.1| polyprotein [Arabidopsis thaliana]                      56   2e-10
gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subc...    52   1e-09
gb|ABA98286.2| retrotransposon protein, putative, Ty1-copia subc...    52   3e-09
emb|CAN74695.1| hypothetical protein VITISV_024648 [Vitis vinifera]    57   3e-09
emb|CAN66863.1| hypothetical protein VITISV_013500 [Vitis vinifera]    49   2e-08
emb|CAC37623.1| copia-like polyprotein [Arabidopsis thaliana]          51   2e-08
gb|AAK43485.1|AC084807_10 polyprotein, putative [Arabidopsis tha...    52   2e-08
gb|AAD43604.1|AC005698_3 T3P18.3 [Arabidopsis thaliana]                51   2e-08
gb|AAF02855.1|AC009324_4 Similar to retrotransposon proteins [Ar...    62   6e-08
gb|ABA97652.1| retrotransposon protein, putative, Ty1-copia subc...    49   9e-08
emb|CAB46043.1| retrotransposon like protein [Arabidopsis thalia...    49   1e-07
emb|CAN79884.1| hypothetical protein VITISV_002539 [Vitis vinifera]    49   2e-07
ref|XP_004967136.1| PREDICTED: uncharacterized protein LOC101762...    60   2e-07
dbj|BAB90546.1| putative rice retrotransposon retrofit gag/pol p...    46   3e-07
gb|ACV42639.1| gag/pol [Oryza sativa Japonica Group]                   46   3e-07
pir||S27768 RNA-directed DNA polymerase (EC 2.7.7.49) - maize tr...    59   7e-07
gb|AAA33448.1| reverse transcriptase, partial [Zea mays]               59   7e-07

>gb|AAC02672.1| polyprotein [Arabidopsis arenosa]
          Length = 1390

 Score = 55.8 bits (133), Expect(2) = 1e-10
 Identities = 27/58 (46%), Positives = 36/58 (62%)
 Frame = +3

Query: 231 RLYGQTPSYLALQVFGRASYPRLGAYLSSILLSRTIECVFLGYSLQHKAYRCLGHKFG 404
           +L+GQ P+YL L+VFG   +P L  Y +  L +R++ CV LGYSL   AY CL    G
Sbjct: 679 KLFGQPPNYLKLRVFGCLCFPWLRPYTAHKLDNRSMPCVLLGYSLSQSAYLCLDRATG 736



 Score = 35.4 bits (80), Expect(2) = 1e-10
 Identities = 26/71 (36%), Positives = 32/71 (45%), Gaps = 16/71 (22%)
 Frame = +2

Query: 38  KSFCASLGIHHFSTP-HTP*HQQNGLVEHKF---------------VSLG*WGMVVSIVV 169
           +SF AS GI H +TP HTP  + NG+ E K                +S   W    +  V
Sbjct: 603 RSFLASHGISHMTTPPHTP--ELNGISERKHRHIVETGLTLLSTASMSKEYWSYAFTTAV 660

Query: 170 YLTNRPATPTL 202
           YL NR  TP L
Sbjct: 661 YLINRMLTPVL 671


>gb|AAC02666.1| polyprotein [Arabidopsis thaliana]
          Length = 1451

 Score = 56.2 bits (134), Expect(2) = 2e-10
 Identities = 26/58 (44%), Positives = 36/58 (62%)
 Frame = +3

Query: 231 RLYGQTPSYLALQVFGRASYPRLGAYLSSILLSRTIECVFLGYSLQHKAYRCLGHKFG 404
           +L+GQ P+YL L++FG   +P L  Y +  L +R++ CV LGYSL   AY CL    G
Sbjct: 679 KLFGQPPNYLKLRIFGCLCFPWLRPYTAHKLDNRSVPCVLLGYSLSQSAYLCLDRATG 736



 Score = 34.7 bits (78), Expect(2) = 2e-10
 Identities = 27/71 (38%), Positives = 32/71 (45%), Gaps = 16/71 (22%)
 Frame = +2

Query: 38  KSFCASLGIHHFSTP-HTP*HQQNGLVEHK---FVSLG*------------WGMVVSIVV 169
           +SF AS GI H +TP HTP  + NG+ E K    V  G             W    +  V
Sbjct: 603 RSFLASHGISHMTTPPHTP--ELNGISERKHRHIVETGLTLLSTASMPKEYWSYAFATAV 660

Query: 170 YLTNRPATPTL 202
           YL NR  TP L
Sbjct: 661 YLINRMLTPVL 671


>gb|AAC02664.1| polyprotein [Arabidopsis thaliana]
          Length = 1451

 Score = 56.2 bits (134), Expect(2) = 2e-10
 Identities = 26/58 (44%), Positives = 36/58 (62%)
 Frame = +3

Query: 231 RLYGQTPSYLALQVFGRASYPRLGAYLSSILLSRTIECVFLGYSLQHKAYRCLGHKFG 404
           +L+GQ P+YL L++FG   +P L  Y +  L +R++ CV LGYSL   AY CL    G
Sbjct: 679 KLFGQPPNYLKLRIFGCLCFPWLRPYTAHKLDNRSVPCVLLGYSLSQSAYLCLDRATG 736



 Score = 34.7 bits (78), Expect(2) = 2e-10
 Identities = 27/71 (38%), Positives = 32/71 (45%), Gaps = 16/71 (22%)
 Frame = +2

Query: 38  KSFCASLGIHHFSTP-HTP*HQQNGLVEHK---FVSLG*------------WGMVVSIVV 169
           +SF AS GI H +TP HTP  + NG+ E K    V  G             W    +  V
Sbjct: 603 RSFLASHGISHMTTPPHTP--ELNGISERKHRHIVETGLTLLSTASMPKEYWSYAFATAV 660

Query: 170 YLTNRPATPTL 202
           YL NR  TP L
Sbjct: 661 YLINRMLTPVL 671


>gb|AAC02669.1| polyprotein [Arabidopsis thaliana]
          Length = 1451

 Score = 56.2 bits (134), Expect(2) = 2e-10
 Identities = 26/58 (44%), Positives = 36/58 (62%)
 Frame = +3

Query: 231 RLYGQTPSYLALQVFGRASYPRLGAYLSSILLSRTIECVFLGYSLQHKAYRCLGHKFG 404
           +L+GQ P+YL L++FG   +P L  Y +  L +R++ CV LGYSL   AY CL    G
Sbjct: 679 KLFGQPPNYLKLRIFGCLCFPWLRPYTAHKLDNRSVPCVLLGYSLSQSAYLCLDRATG 736



 Score = 34.7 bits (78), Expect(2) = 2e-10
 Identities = 27/71 (38%), Positives = 32/71 (45%), Gaps = 16/71 (22%)
 Frame = +2

Query: 38  KSFCASLGIHHFSTP-HTP*HQQNGLVEHK---FVSLG*------------WGMVVSIVV 169
           +SF AS GI H +TP HTP  + NG+ E K    V  G             W    +  V
Sbjct: 603 RSFLASHGISHMTTPPHTP--ELNGISERKHRHIVETGLTLLSTASMPKEYWSYAFATAV 660

Query: 170 YLTNRPATPTL 202
           YL NR  TP L
Sbjct: 661 YLINRMLTPVL 671


>gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1460

 Score = 52.4 bits (124), Expect(2) = 1e-09
 Identities = 23/53 (43%), Positives = 34/53 (64%)
 Frame = +3

Query: 231 RLYGQTPSYLALQVFGRASYPRLGAYLSSILLSRTIECVFLGYSLQHKAYRCL 389
           +L+ Q P Y +L++FG A +P L  Y +  L  R+  CVFLG+S  HK ++CL
Sbjct: 662 KLFKQKPDYSSLRIFGCACWPNLRPYNNHKLQFRSKRCVFLGFSTMHKGFKCL 714



 Score = 35.8 bits (81), Expect(2) = 1e-09
 Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 16/68 (23%)
 Frame = +2

Query: 29  ESSKSFCASLGI-HHFSTPHTP*HQQNG---------------LVEHKFVSLG*WGMVVS 160
           +S  SF + +GI HH S PHT  HQQNG               L+ H  + L  W     
Sbjct: 583 QSLNSFFSKIGIVHHVSCPHT--HQQNGSAERKHRHIVEIGLSLLSHASMPLKFWDEAFQ 640

Query: 161 IVVYLTNR 184
           +  YL NR
Sbjct: 641 VATYLINR 648


>gb|ABA98286.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1478

 Score = 52.4 bits (124), Expect(2) = 3e-09
 Identities = 23/53 (43%), Positives = 34/53 (64%)
 Frame = +3

Query: 231 RLYGQTPSYLALQVFGRASYPRLGAYLSSILLSRTIECVFLGYSLQHKAYRCL 389
           +L+ Q P Y +L++FG A +P L  Y +  L  R+  CVFLG+S  HK ++CL
Sbjct: 695 KLFKQKPDYSSLRIFGCACWPNLRPYNNHKLQFRSKRCVFLGFSTMHKGFKCL 747



 Score = 34.3 bits (77), Expect(2) = 3e-09
 Identities = 24/68 (35%), Positives = 29/68 (42%), Gaps = 16/68 (23%)
 Frame = +2

Query: 29  ESSKSFCASLGI-HHFSTPHTP*HQQNG---------------LVEHKFVSLG*WGMVVS 160
           +S  SF + +GI HH S PHT  HQQNG               L+ H  + L  W     
Sbjct: 616 QSLNSFFSKIGIVHHVSCPHT--HQQNGSAERKHRHIVEIGLSLLSHASMPLKFWDEAFQ 673

Query: 161 IVVYLTNR 184
              YL NR
Sbjct: 674 AATYLINR 681


>emb|CAN74695.1| hypothetical protein VITISV_024648 [Vitis vinifera]
          Length = 1424

 Score = 57.0 bits (136), Expect(2) = 3e-09
 Identities = 29/63 (46%), Positives = 38/63 (60%), Gaps = 5/63 (7%)
 Frame = +3

Query: 216 PILESR-----LYGQTPSYLALQVFGRASYPRLGAYLSSILLSRTIECVFLGYSLQHKAY 380
           P+L+++     L+ Q PSY  L+VFG   YP L  +    L  R+I C FLGYSL HK Y
Sbjct: 707 PVLKNKSPLEVLFHQKPSYSXLKVFGCMCYPNLRPFNHHKLQFRSIPCTFLGYSLNHKGY 766

Query: 381 RCL 389
           +CL
Sbjct: 767 KCL 769



 Score = 29.6 bits (65), Expect(2) = 3e-09
 Identities = 21/63 (33%), Positives = 25/63 (39%), Gaps = 15/63 (23%)
 Frame = +2

Query: 62  IHHFSTPHTP*HQQNGLVEHKF---------------VSLG*WGMVVSIVVYLTNRPATP 196
           IH  S P+T  H+QNGL E K                +    W       VYL NR  TP
Sbjct: 650 IHRISCPYT--HEQNGLAERKHRHIVEHGIALLAQASLPFKYWDEAFRTSVYLINRLPTP 707

Query: 197 TLE 205
            L+
Sbjct: 708 VLK 710


>emb|CAN66863.1| hypothetical protein VITISV_013500 [Vitis vinifera]
          Length = 1112

 Score = 48.5 bits (114), Expect(2) = 2e-08
 Identities = 24/53 (45%), Positives = 31/53 (58%)
 Frame = +3

Query: 231 RLYGQTPSYLALQVFGRASYPRLGAYLSSILLSRTIECVFLGYSLQHKAYRCL 389
           +L+G  P+Y  L+ FG   YP L  Y S  L SR+  C+F+GYS    AY CL
Sbjct: 434 KLFGTFPNYSKLRSFGCLCYPWLRPYTSPKLESRSSPCIFVGYSPTQSAYLCL 486



 Score = 35.8 bits (81), Expect(2) = 2e-08
 Identities = 28/81 (34%), Positives = 35/81 (43%), Gaps = 14/81 (17%)
 Frame = +2

Query: 2   SDGNRKYNNESSKSFCASLGIHHF-STPHTP*HQ-----------QNGL--VEHKFVSLG 139
           SD   +Y  ++  SF    G+ H  S PHTP H            + GL  + H  + L 
Sbjct: 348 SDNGGEY--QALSSFLTINGVSHLTSPPHTPEHNGYSERRHRHIVETGLSLLTHASMPLS 405

Query: 140 *WGMVVSIVVYLTNRPATPTL 202
            W    S  VYL NR  TPTL
Sbjct: 406 YWPFAFSTTVYLINRLPTPTL 426


>emb|CAC37623.1| copia-like polyprotein [Arabidopsis thaliana]
          Length = 1466

 Score = 51.2 bits (121), Expect(2) = 2e-08
 Identities = 32/84 (38%), Positives = 44/84 (52%), Gaps = 7/84 (8%)
 Frame = +3

Query: 159 PLSFILPTAQPPLHLNGLLP--ILES-----RLYGQTPSYLALQVFGRASYPRLGAYLSS 317
           PL F +       +L+ LLP  +L+       L+ Q   Y  L+VFG A YP L     +
Sbjct: 639 PLKFWVEAFFTANYLSNLLPSSVLKEISPYETLFQQKVDYTPLRVFGTACYPCLRPLAKN 698

Query: 318 ILLSRTIECVFLGYSLQHKAYRCL 389
               R+++CVFLGY  Q+K YRCL
Sbjct: 699 KFDPRSLQCVFLGYHNQYKGYRCL 722



 Score = 32.7 bits (73), Expect(2) = 2e-08
 Identities = 18/42 (42%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
 Frame = +2

Query: 2   SDGNRKYNNESSKSFCASLGIHH-FSTPHTP*HQQNGLVEHK 124
           SDG  ++ +   K      GIHH  S P+TP  QQNG+ E K
Sbjct: 582 SDGGGEFTSNKLKEHFREHGIHHRISCPYTP--QQNGVAERK 621


>gb|AAK43485.1|AC084807_10 polyprotein, putative [Arabidopsis thaliana]
           gi|225898008|dbj|BAH30336.1| hypothetical protein
           [Arabidopsis thaliana]
          Length = 1459

 Score = 52.0 bits (123), Expect(2) = 2e-08
 Identities = 25/53 (47%), Positives = 33/53 (62%)
 Frame = +3

Query: 231 RLYGQTPSYLALQVFGRASYPRLGAYLSSILLSRTIECVFLGYSLQHKAYRCL 389
           +L+G +P+Y  L+VFG   +P L  Y  + L  R+  CVFLGYSL   AY CL
Sbjct: 683 KLFGSSPNYQRLRVFGCLCFPWLRPYTRNKLEERSKRCVFLGYSLTQTAYLCL 735



 Score = 32.0 bits (71), Expect(2) = 2e-08
 Identities = 26/71 (36%), Positives = 28/71 (39%), Gaps = 16/71 (22%)
 Frame = +2

Query: 38  KSFCASLGIHHF-STPHTP*HQQNGLVEHKF---------------VSLG*WGMVVSIVV 169
           + F  S GI H  S PHTP H  NGL E K                V    W    +  V
Sbjct: 607 RDFLVSNGISHLTSPPHTPEH--NGLSERKHRHIVETGLTLLTQASVPREYWTYAFATAV 664

Query: 170 YLTNRPATPTL 202
           YL NR  TP L
Sbjct: 665 YLINRMPTPVL 675


>gb|AAD43604.1|AC005698_3 T3P18.3 [Arabidopsis thaliana]
          Length = 1309

 Score = 51.2 bits (121), Expect(2) = 2e-08
 Identities = 32/84 (38%), Positives = 44/84 (52%), Gaps = 7/84 (8%)
 Frame = +3

Query: 159 PLSFILPTAQPPLHLNGLLP--ILES-----RLYGQTPSYLALQVFGRASYPRLGAYLSS 317
           PL F +       +L+ LLP  +L+       L+ Q   Y  L+VFG A YP L     +
Sbjct: 482 PLKFWVEAFFTANYLSNLLPSSVLKEISPYETLFQQKVDYTPLRVFGTACYPCLRPLAKN 541

Query: 318 ILLSRTIECVFLGYSLQHKAYRCL 389
               R+++CVFLGY  Q+K YRCL
Sbjct: 542 KFDPRSLQCVFLGYHNQYKGYRCL 565



 Score = 32.7 bits (73), Expect(2) = 2e-08
 Identities = 18/42 (42%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
 Frame = +2

Query: 2   SDGNRKYNNESSKSFCASLGIHH-FSTPHTP*HQQNGLVEHK 124
           SDG  ++ +   K      GIHH  S P+TP  QQNG+ E K
Sbjct: 425 SDGGGEFTSNKLKEHFREHGIHHRISCPYTP--QQNGVAERK 464


>gb|AAF02855.1|AC009324_4 Similar to retrotransposon proteins [Arabidopsis thaliana]
          Length = 1522

 Score = 62.0 bits (149), Expect(2) = 6e-08
 Identities = 28/53 (52%), Positives = 38/53 (71%)
 Frame = +3

Query: 231 RLYGQTPSYLALQVFGRASYPRLGAYLSSILLSRTIECVFLGYSLQHKAYRCL 389
           +LYG+ P Y AL+VFG A YP L  Y S+    R+++CVFLGY+ ++K YRCL
Sbjct: 673 KLYGKAPEYSALRVFGCACYPTLRDYASTKFDPRSLKCVFLGYNEKYKGYRCL 725



 Score = 20.4 bits (41), Expect(2) = 6e-08
 Identities = 8/8 (100%), Positives = 8/8 (100%)
 Frame = +2

Query: 404 RIYISRHV 427
           RIYISRHV
Sbjct: 731 RIYISRHV 738


>gb|ABA97652.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1145

 Score = 48.5 bits (114), Expect(2) = 9e-08
 Identities = 22/53 (41%), Positives = 31/53 (58%)
 Frame = +3

Query: 231 RLYGQTPSYLALQVFGRASYPRLGAYLSSILLSRTIECVFLGYSLQHKAYRCL 389
           + + Q P Y +L+VFG A +P L  Y    L  R+  C FLG+S  HK ++CL
Sbjct: 538 KFFHQKPDYSSLRVFGCACWPNLRPYNKHKLQFRSKRCAFLGFSNMHKGFKCL 590



 Score = 33.1 bits (74), Expect(2) = 9e-08
 Identities = 23/64 (35%), Positives = 27/64 (42%), Gaps = 16/64 (25%)
 Frame = +2

Query: 41  SFCASLGI-HHFSTPHTP*HQQNG---------------LVEHKFVSLG*WGMVVSIVVY 172
           SF + +GI HH S PHT  HQQNG               L+ H  + L  W        Y
Sbjct: 463 SFFSKIGIVHHVSCPHT--HQQNGSAERKHRHIVEVGLSLLSHAHMPLKFWDEAFQAATY 520

Query: 173 LTNR 184
           L NR
Sbjct: 521 LINR 524


>emb|CAB46043.1| retrotransposon like protein [Arabidopsis thaliana]
           gi|7268438|emb|CAB80958.1| retrotransposon like protein
           [Arabidopsis thaliana]
          Length = 1474

 Score = 49.3 bits (116), Expect(2) = 1e-07
 Identities = 24/52 (46%), Positives = 31/52 (59%)
 Frame = +3

Query: 231 RLYGQTPSYLALQVFGRASYPRLGAYLSSILLSRTIECVFLGYSLQHKAYRC 386
           +L+G  P+Y  L+VFG   +P L  Y  + L  R+  CVFLGYSL   AY C
Sbjct: 678 KLFGSKPNYERLRVFGCLCFPWLRPYTHNKLEERSRRCVFLGYSLTQTAYLC 729



 Score = 32.0 bits (71), Expect(2) = 1e-07
 Identities = 26/71 (36%), Positives = 28/71 (39%), Gaps = 16/71 (22%)
 Frame = +2

Query: 38  KSFCASLGIHHF-STPHTP*HQQNGLVEHKF---------------VSLG*WGMVVSIVV 169
           + F  S GI H  S PHTP H  NGL E K                V    W    +  V
Sbjct: 602 REFLVSNGISHLTSPPHTPEH--NGLSERKHRHIVETGLTLLTQASVPREYWPYAFAAAV 659

Query: 170 YLTNRPATPTL 202
           YL NR  TP L
Sbjct: 660 YLINRMPTPVL 670


>emb|CAN79884.1| hypothetical protein VITISV_002539 [Vitis vinifera]
          Length = 1453

 Score = 48.9 bits (115), Expect(2) = 2e-07
 Identities = 25/62 (40%), Positives = 33/62 (53%)
 Frame = +3

Query: 201 LNGLLPILESRLYGQTPSYLALQVFGRASYPRLGAYLSSILLSRTIECVFLGYSLQHKAY 380
           L GL P     L+G++P+Y     FG   YP L  Y       R++ C+FLGYS  HK +
Sbjct: 617 LGGLSPF--EVLFGKSPNYENFHPFGCRVYPCLRDYAPHKFSPRSLPCIFLGYSSSHKGF 674

Query: 381 RC 386
           RC
Sbjct: 675 RC 676



 Score = 32.0 bits (71), Expect(2) = 2e-07
 Identities = 25/83 (30%), Positives = 31/83 (37%), Gaps = 16/83 (19%)
 Frame = +2

Query: 2   SDGNRKYNNESSKSFCASLGIHH-FSTPHTP*HQQNGLVE---------------HKFVS 133
           SDG  ++ +   +S     GIHH  S P+TP   QNG  E               H  V 
Sbjct: 537 SDGGAEFTSNRFQSHLQQFGIHHQMSCPYTP--SQNGRAERKHRHVTETGLALLFHSHVP 594

Query: 134 LG*WGMVVSIVVYLTNRPATPTL 202
              W    S   Y+ NR   P L
Sbjct: 595 PRYWVDAFSTATYIINRLPLPVL 617


>ref|XP_004967136.1| PREDICTED: uncharacterized protein LOC101762311 [Setaria italica]
          Length = 866

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 41/116 (35%), Positives = 54/116 (46%), Gaps = 12/116 (10%)
 Frame = +3

Query: 78  PHTHPNTNRMV-----LLNTNSFLLANGAWLCPLSFILPTAQPPLHLNGLLP-------I 221
           PHTH            ++     LLAN +   PL F         +L  LLP       I
Sbjct: 519 PHTHQQNGAAERKHRHIIEVGLALLANASM--PLKFWDQAFLTATYLINLLPSKVINFEI 576

Query: 222 LESRLYGQTPSYLALQVFGRASYPRLGAYLSSILLSRTIECVFLGYSLQHKAYRCL 389
             +RL+G T  Y  L+VFG A +P L  Y S  L  R+ +C F+GYS  HK ++CL
Sbjct: 577 PATRLFGDTSDYSNLRVFGCACWPNLRPYNSHKLSFRSTQCAFIGYSSMHKGFKCL 632


>dbj|BAB90546.1| putative rice retrotransposon retrofit gag/pol polyprotein [Oryza
           sativa Japonica Group]
          Length = 1448

 Score = 46.2 bits (108), Expect(2) = 3e-07
 Identities = 21/53 (39%), Positives = 32/53 (60%)
 Frame = +3

Query: 231 RLYGQTPSYLALQVFGRASYPRLGAYLSSILLSRTIECVFLGYSLQHKAYRCL 389
           +L+ Q P Y +L+VF    +P L  Y +  L  R+ +CVFLG+S  HK ++ L
Sbjct: 671 KLFNQKPDYSSLRVFSCTCWPHLHPYNTHKLQFRSKQCVFLGFSTHHKGFKFL 723



 Score = 33.9 bits (76), Expect(2) = 3e-07
 Identities = 25/71 (35%), Positives = 30/71 (42%), Gaps = 16/71 (22%)
 Frame = +2

Query: 41  SFCASLGI-HHFSTPHTP*HQQNGLVEHKF---------------VSLG*WGMVVSIVVY 172
           SF A +GI HH S PHT  HQQNG  E K                + L  W        Y
Sbjct: 596 SFFAQIGIDHHVSCPHT--HQQNGSAERKHKHIIEVGLSLLSYASMPLKFWDEAFVAATY 653

Query: 173 LTNRPATPTLE 205
           L NR  + T++
Sbjct: 654 LINRIPSKTIQ 664


>gb|ACV42639.1| gag/pol [Oryza sativa Japonica Group]
          Length = 1448

 Score = 46.2 bits (108), Expect(2) = 3e-07
 Identities = 21/53 (39%), Positives = 32/53 (60%)
 Frame = +3

Query: 231 RLYGQTPSYLALQVFGRASYPRLGAYLSSILLSRTIECVFLGYSLQHKAYRCL 389
           +L+ Q P Y +L+VF    +P L  Y +  L  R+ +CVFLG+S  HK ++ L
Sbjct: 671 KLFNQKPDYSSLRVFSCTCWPHLHPYNTHKLQFRSKQCVFLGFSTHHKGFKFL 723



 Score = 33.9 bits (76), Expect(2) = 3e-07
 Identities = 25/71 (35%), Positives = 30/71 (42%), Gaps = 16/71 (22%)
 Frame = +2

Query: 41  SFCASLGI-HHFSTPHTP*HQQNGLVEHKF---------------VSLG*WGMVVSIVVY 172
           SF A +GI HH S PHT  HQQNG  E K                + L  W        Y
Sbjct: 596 SFFAQIGIDHHVSCPHT--HQQNGSAERKHKHIIEVGLSLLSYASMPLKFWDEAFVAATY 653

Query: 173 LTNRPATPTLE 205
           L NR  + T++
Sbjct: 654 LINRIPSKTIQ 664


>pir||S27768 RNA-directed DNA polymerase (EC 2.7.7.49) - maize transposon
           (fragment)
          Length = 699

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 29/52 (55%), Positives = 32/52 (61%)
 Frame = +3

Query: 234 LYGQTPSYLALQVFGRASYPRLGAYLSSILLSRTIECVFLGYSLQHKAYRCL 389
           LYG TPSY  L+VFG A YP   A     L  R+  C+FLGYS  HK YRCL
Sbjct: 89  LYGTTPSYDHLRVFGCACYPNTSATAPHKLSPRSTRCLFLGYSPDHKGYRCL 140


>gb|AAA33448.1| reverse transcriptase, partial [Zea mays]
          Length = 700

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 29/52 (55%), Positives = 32/52 (61%)
 Frame = +3

Query: 234 LYGQTPSYLALQVFGRASYPRLGAYLSSILLSRTIECVFLGYSLQHKAYRCL 389
           LYG TPSY  L+VFG A YP   A     L  R+  C+FLGYS  HK YRCL
Sbjct: 89  LYGTTPSYDHLRVFGCACYPNTSATAPHKLSPRSTRCLFLGYSPDHKGYRCL 140