BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia25_contig00031139
         (1019 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284797.2| PREDICTED: tRNA pseudouridine synthase A, mi...   320   6e-85
emb|CAN69118.1| hypothetical protein VITISV_031845 [Vitis vinifera]   309   1e-81
ref|XP_002510619.1| pseudouridylate synthase, putative [Ricinus ...   304   4e-80
ref|XP_004507720.1| PREDICTED: tRNA pseudouridine synthase A, mi...   303   1e-79
ref|XP_004507719.1| PREDICTED: tRNA pseudouridine synthase A, mi...   303   1e-79
ref|XP_003610360.1| tRNA pseudouridine synthase [Medicago trunca...   301   2e-79
gb|ACJ85562.1| unknown [Medicago truncatula] gi|388491044|gb|AFK...   301   2e-79
ref|XP_003610356.1| tRNA pseudouridine synthase [Medicago trunca...   301   2e-79
gb|ADN34131.1| tRNA pseudouridine synthase family protein [Cucum...   297   5e-78
ref|XP_006604957.1| PREDICTED: LOW QUALITY PROTEIN: tRNA pseudou...   296   9e-78
ref|XP_007154901.1| hypothetical protein PHAVU_003G157400g [Phas...   296   9e-78
ref|XP_007154900.1| hypothetical protein PHAVU_003G157400g [Phas...   296   9e-78
ref|XP_006435279.1| hypothetical protein CICLE_v10000838mg [Citr...   296   1e-77
ref|XP_006575306.1| PREDICTED: tRNA pseudouridine synthase A, mi...   295   2e-77
ref|XP_003519139.1| PREDICTED: tRNA pseudouridine synthase A, mi...   295   2e-77
ref|XP_002307759.2| hypothetical protein POPTR_0005s26830g [Popu...   294   4e-77
ref|XP_004157082.1| PREDICTED: LOW QUALITY PROTEIN: tRNA pseudou...   293   8e-77
ref|XP_004145528.1| PREDICTED: tRNA pseudouridine synthase A, mi...   293   8e-77
ref|XP_006473737.1| PREDICTED: tRNA pseudouridine synthase A, mi...   292   1e-76
ref|XP_004292926.1| PREDICTED: tRNA pseudouridine synthase A, mi...   291   2e-76

>ref|XP_002284797.2| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like [Vitis
           vinifera]
          Length = 503

 Score =  320 bits (820), Expect = 6e-85
 Identities = 169/258 (65%), Positives = 193/258 (74%), Gaps = 14/258 (5%)
 Frame = -3

Query: 828 FFAYCGVGYQGMQKNPGAKTIEADLEEALFLSGAVPEQERGNSKRYDWARSARTDKGVSA 649
           FFAYCGVGYQGMQKNPGAKTIE DLEEALF SGAVPEQ+RG+ KR+DWARSARTDKGVSA
Sbjct: 44  FFAYCGVGYQGMQKNPGAKTIEGDLEEALFFSGAVPEQDRGHPKRFDWARSARTDKGVSA 103

Query: 648 VGQVVSGRFYVDPPGLVDRLNSNLASQIRIFGFKRVTPAFSAKKFCDRRRYVYLIPAFAL 469
           VGQVVSGRFY+DPPGLV+RLNSNL  QIRIFGFKRVT +F+AKKFCDRRRYVYLIP FAL
Sbjct: 104 VGQVVSGRFYIDPPGLVERLNSNLPPQIRIFGFKRVTASFNAKKFCDRRRYVYLIPVFAL 163

Query: 468 DPCSHPDRETVLASVGSENELVKCLECSDRGRKVVGVMGKRSFEFR-ALNSETVVDXXXX 292
           DP SHPDRE+VLASVGSENELVKCLECS+RGRKVVG+MGKRSFE + +++    V+    
Sbjct: 164 DPSSHPDRESVLASVGSENELVKCLECSERGRKVVGIMGKRSFESKVSVDDREDVEGESK 223

Query: 291 XXXXXXXXXSEVKAEVVVSLDNDHDDNS--------KSVQNQDTILSSDPMEVSS----- 151
                    SE K E + S DN HD NS        +  Q+ +T  S+     S+     
Sbjct: 224 NIVGAAILKSEAKEESMASSDNRHDGNSISQPIKEGRCFQDNETSESTPDSRASAQNEPG 283

Query: 150 VTIEDEEANAEEKLAKGS 97
           V+  ++    E KL KGS
Sbjct: 284 VSHSEQSDKGENKLEKGS 301


>emb|CAN69118.1| hypothetical protein VITISV_031845 [Vitis vinifera]
          Length = 559

 Score =  309 bits (792), Expect = 1e-81
 Identities = 160/251 (63%), Positives = 190/251 (75%), Gaps = 9/251 (3%)
 Frame = -3

Query: 828 FFAYCGVGYQGMQKNPGAKTIEADLEEALFLSGAVPEQERGNSKRYDWARSARTDKGVSA 649
           FFAYCGVGYQGMQKNPGAKTIE DLEEALF SGAVPEQ+RG+ KR+DWARSARTDKGVSA
Sbjct: 32  FFAYCGVGYQGMQKNPGAKTIEGDLEEALFFSGAVPEQDRGHPKRFDWARSARTDKGVSA 91

Query: 648 VGQVVSGRFYVDPPGLVDRLNSNLASQIRIFGFKRVTPAFSAKKFCDRRRYVYLIPAFAL 469
           VGQVVSGRFY+DPPGLV+RLNSNL  QIRIFGFKRVT +F+AKKFCDRRRYVYLIP FAL
Sbjct: 92  VGQVVSGRFYIDPPGLVERLNSNLPPQIRIFGFKRVTASFNAKKFCDRRRYVYLIPVFAL 151

Query: 468 DPCSHPDRETVLASVGSENELVKCLECSDRGRKVVGVMGKRSFEFRAL---------NSE 316
           DP SHPDRE+VLASVGSENELVKCLECS+RGRKVVG+MGKRSFE +            S+
Sbjct: 152 DPSSHPDRESVLASVGSENELVKCLECSERGRKVVGIMGKRSFESKVSVDDREDVEGESK 211

Query: 315 TVVDXXXXXXXXXXXXXSEVKAEVVVSLDNDHDDNSKSVQNQDTILSSDPMEVSSVTIED 136
            +V              SEV+ E+  + +N++ D + S+      +  +  ++SS  ++ 
Sbjct: 212 NIVQLGIPSNDEAAIVNSEVQEEIKATSNNNNIDANNSISE---TIKEEAAKLSS-EVDA 267

Query: 135 EEANAEEKLAK 103
           E  N E  +++
Sbjct: 268 EIINGENSISE 278


>ref|XP_002510619.1| pseudouridylate synthase, putative [Ricinus communis]
           gi|223551320|gb|EEF52806.1| pseudouridylate synthase,
           putative [Ricinus communis]
          Length = 584

 Score =  304 bits (778), Expect = 4e-80
 Identities = 158/254 (62%), Positives = 192/254 (75%), Gaps = 2/254 (0%)
 Frame = -3

Query: 828 FFAYCGVGYQGMQKNPGAKTIEADLEEALFLSGAVPEQERGNSKRYDWARSARTDKGVSA 649
           FFAYCGVGYQGMQKNPGAKTIE DLEEALF SGAVPEQ+RG  KRYDWARSARTDKGVSA
Sbjct: 59  FFAYCGVGYQGMQKNPGAKTIEGDLEEALFHSGAVPEQDRGCPKRYDWARSARTDKGVSA 118

Query: 648 VGQVVSGRFYVDPPGLVDRLNSNLASQIRIFGFKRVTPAFSAKKFCDRRRYVYLIPAFAL 469
           VGQV+SGRFYVDPPGLVDRLNS L SQIRIFG+KRVT +F+AKKFCDRRRYVYLIP FAL
Sbjct: 119 VGQVISGRFYVDPPGLVDRLNSILPSQIRIFGYKRVTASFNAKKFCDRRRYVYLIPVFAL 178

Query: 468 DPCSHPDRETVLASVGSENELVKCLECSDRGRKVVGVMGKRSFEFRALNSETVVDXXXXX 289
           DP SH DRE+VLAS+GS +ELVKCLECS+RGRKV+G +GKRSFE ++   +T +      
Sbjct: 179 DPSSHRDRESVLASLGSGDELVKCLECSERGRKVIGAVGKRSFESKSEAFQTDI----LL 234

Query: 288 XXXXXXXXSEVKAEVVVSLDNDHD--DNSKSVQNQDTILSSDPMEVSSVTIEDEEANAEE 115
                    E+K ++ +S+DN H    +S+ V+  +   + D    S++   D  +N+E+
Sbjct: 235 NGGCAIANCEIKEDISMSMDNAHGVRMHSEFVEQTNVSHNEDSETESAMPRTDILSNSED 294

Query: 114 KLAKGSSSSEKIVM 73
              K  S  E++++
Sbjct: 295 GNVKSDSKQEEVMV 308


>ref|XP_004507720.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like
           isoform X2 [Cicer arietinum]
          Length = 475

 Score =  303 bits (775), Expect = 1e-79
 Identities = 162/251 (64%), Positives = 186/251 (74%), Gaps = 8/251 (3%)
 Frame = -3

Query: 825 FAYCGVGYQGMQKNPGAKTIEADLEEALFLSGAVPEQERGNSKRYDWARSARTDKGVSAV 646
           FAYCGVGYQGMQKNPGAKTIE ++EEAL++SGAVPEQ+RG SKRYDWARSARTDKGVSAV
Sbjct: 30  FAYCGVGYQGMQKNPGAKTIEGEIEEALYVSGAVPEQDRGMSKRYDWARSARTDKGVSAV 89

Query: 645 GQVVSGRFYVDPPGLVDRLNSNLASQIRIFGFKRVTPAFSAKKFCDRRRYVYLIPAFALD 466
           GQVVSGRFY+DPPG VDRLNSNL SQIRIFG+KRVT +FSAKKFCDRRRYVYLIP FALD
Sbjct: 90  GQVVSGRFYIDPPGFVDRLNSNLPSQIRIFGYKRVTASFSAKKFCDRRRYVYLIPVFALD 149

Query: 465 PCSHPDRETVLASVGSENELVKCLECSDRGRKVVGVMG--KRSFEFRALNSETVVDXXXX 292
           PC H DRETVLAS+GSENELVKCLECS+RGRKV G++G  KR+ E  A++ ET       
Sbjct: 150 PCCHRDRETVLASLGSENELVKCLECSERGRKVEGLVGNSKRNLELEAMDVETTDKGDDN 209

Query: 291 XXXXXXXXXSEVKAEVVVSLDNDHDDNSKS-----VQNQDTILS-SDPMEVSSVTIEDEE 130
                    +E K  V        D NSK+     V  QD +   +   E +S  +E+E+
Sbjct: 210 RSNKESINDNEGKVSV-------EDVNSKTSFETVVSGQDEVSPLNGGSENNSAVLEEEK 262

Query: 129 ANAEEKLAKGS 97
            N E+  AK S
Sbjct: 263 VNGEDTPAKRS 273


>ref|XP_004507719.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like
           isoform X1 [Cicer arietinum]
          Length = 505

 Score =  303 bits (775), Expect = 1e-79
 Identities = 162/251 (64%), Positives = 186/251 (74%), Gaps = 8/251 (3%)
 Frame = -3

Query: 825 FAYCGVGYQGMQKNPGAKTIEADLEEALFLSGAVPEQERGNSKRYDWARSARTDKGVSAV 646
           FAYCGVGYQGMQKNPGAKTIE ++EEAL++SGAVPEQ+RG SKRYDWARSARTDKGVSAV
Sbjct: 60  FAYCGVGYQGMQKNPGAKTIEGEIEEALYVSGAVPEQDRGMSKRYDWARSARTDKGVSAV 119

Query: 645 GQVVSGRFYVDPPGLVDRLNSNLASQIRIFGFKRVTPAFSAKKFCDRRRYVYLIPAFALD 466
           GQVVSGRFY+DPPG VDRLNSNL SQIRIFG+KRVT +FSAKKFCDRRRYVYLIP FALD
Sbjct: 120 GQVVSGRFYIDPPGFVDRLNSNLPSQIRIFGYKRVTASFSAKKFCDRRRYVYLIPVFALD 179

Query: 465 PCSHPDRETVLASVGSENELVKCLECSDRGRKVVGVMG--KRSFEFRALNSETVVDXXXX 292
           PC H DRETVLAS+GSENELVKCLECS+RGRKV G++G  KR+ E  A++ ET       
Sbjct: 180 PCCHRDRETVLASLGSENELVKCLECSERGRKVEGLVGNSKRNLELEAMDVETTDKGDDN 239

Query: 291 XXXXXXXXXSEVKAEVVVSLDNDHDDNSKS-----VQNQDTILS-SDPMEVSSVTIEDEE 130
                    +E K  V        D NSK+     V  QD +   +   E +S  +E+E+
Sbjct: 240 RSNKESINDNEGKVSV-------EDVNSKTSFETVVSGQDEVSPLNGGSENNSAVLEEEK 292

Query: 129 ANAEEKLAKGS 97
            N E+  AK S
Sbjct: 293 VNGEDTPAKRS 303


>ref|XP_003610360.1| tRNA pseudouridine synthase [Medicago truncatula]
           gi|355511415|gb|AES92557.1| tRNA pseudouridine synthase
           [Medicago truncatula] gi|388510220|gb|AFK43176.1|
           unknown [Medicago truncatula]
          Length = 530

 Score =  301 bits (772), Expect = 2e-79
 Identities = 163/265 (61%), Positives = 190/265 (71%), Gaps = 21/265 (7%)
 Frame = -3

Query: 828 FFAYCGVGYQGMQKNPGAKTIEADLEEALFLSGAVPEQERGNSKRYDWARSARTDKGVSA 649
           FFAYCGVGYQGMQKNPGAKTIE +LEEAL++SGAVPEQ+RG SKRYDWARSARTDKGVSA
Sbjct: 59  FFAYCGVGYQGMQKNPGAKTIEGELEEALYVSGAVPEQDRGLSKRYDWARSARTDKGVSA 118

Query: 648 VGQVVSGRFYVDPPGLVDRLNSNLASQIRIFGFKRVTPAFSAKKFCDRRRYVYLIPAFAL 469
           VGQVVSGRFY+DPPG VDRLNSNL SQIRIFGFKRVT +FSAKKFCDRRRYVYLIP FAL
Sbjct: 119 VGQVVSGRFYIDPPGFVDRLNSNLPSQIRIFGFKRVTASFSAKKFCDRRRYVYLIPVFAL 178

Query: 468 DPCSHPDRETVLASVGSENELVKCLECSDRGRKVVGVMG--KRSFEFRALNSETVVDXXX 295
           DPC H DRETVLAS+GSENELVKCL CS+RGRKV GV+G  KR+ E  A++    V+   
Sbjct: 179 DPCCHRDRETVLASLGSENELVKCLPCSERGRKVEGVVGNSKRNLELEAVD----VENGS 234

Query: 294 XXXXXXXXXXSEVKAEVVVSLDNDHDDNSKSVQNQDTILS----------SDPMEVSSVT 145
                          EV +S  +D+  N +S+ + +  +S          SD  EV+ + 
Sbjct: 235 SNKNDVVDSGVTKDVEVSLSKGDDNHLNKESINDNEGKVSVEEVNSKTVVSDQDEVAPIN 294

Query: 144 ---------IEDEEANAEEKLAKGS 97
                    +E+E+ N E+  A GS
Sbjct: 295 GGSENNLGILEEEKVNREDTAANGS 319


>gb|ACJ85562.1| unknown [Medicago truncatula] gi|388491044|gb|AFK33588.1| unknown
           [Medicago truncatula]
          Length = 530

 Score =  301 bits (772), Expect = 2e-79
 Identities = 163/265 (61%), Positives = 190/265 (71%), Gaps = 21/265 (7%)
 Frame = -3

Query: 828 FFAYCGVGYQGMQKNPGAKTIEADLEEALFLSGAVPEQERGNSKRYDWARSARTDKGVSA 649
           FFAYCGVGYQGMQKNPGAKTIE +LEEAL++SGAVPEQ+RG SKRYDWARSARTDKGVSA
Sbjct: 59  FFAYCGVGYQGMQKNPGAKTIEGELEEALYVSGAVPEQDRGLSKRYDWARSARTDKGVSA 118

Query: 648 VGQVVSGRFYVDPPGLVDRLNSNLASQIRIFGFKRVTPAFSAKKFCDRRRYVYLIPAFAL 469
           VGQVVSGRFY+DPPG VDRLNSNL SQIRIFGFKRVT +FSAKKFCDRRRYVYLIP FAL
Sbjct: 119 VGQVVSGRFYIDPPGFVDRLNSNLPSQIRIFGFKRVTASFSAKKFCDRRRYVYLIPVFAL 178

Query: 468 DPCSHPDRETVLASVGSENELVKCLECSDRGRKVVGVMG--KRSFEFRALNSETVVDXXX 295
           DPC H DRETVLAS+GSENELVKCL CS+RGRKV GV+G  KR+ E  A++    V+   
Sbjct: 179 DPCCHRDRETVLASLGSENELVKCLPCSERGRKVEGVVGNSKRNLELEAVD----VENGS 234

Query: 294 XXXXXXXXXXSEVKAEVVVSLDNDHDDNSKSVQNQDTILS----------SDPMEVSSVT 145
                          EV +S  +D+  N +S+ + +  +S          SD  EV+ + 
Sbjct: 235 SNKNDVVDSGVTKDVEVSLSKGDDNHLNKESINDNEGKVSVEEVNSKTVVSDQDEVAPIN 294

Query: 144 ---------IEDEEANAEEKLAKGS 97
                    +E+E+ N E+  A GS
Sbjct: 295 GGSENNLGILEEEKVNREDTAANGS 319


>ref|XP_003610356.1| tRNA pseudouridine synthase [Medicago truncatula]
           gi|355511411|gb|AES92553.1| tRNA pseudouridine synthase
           [Medicago truncatula]
          Length = 530

 Score =  301 bits (772), Expect = 2e-79
 Identities = 163/265 (61%), Positives = 190/265 (71%), Gaps = 21/265 (7%)
 Frame = -3

Query: 828 FFAYCGVGYQGMQKNPGAKTIEADLEEALFLSGAVPEQERGNSKRYDWARSARTDKGVSA 649
           FFAYCGVGYQGMQKNPGAKTIE +LEEAL++SGAVPEQ+RG SKRYDWARSARTDKGVSA
Sbjct: 59  FFAYCGVGYQGMQKNPGAKTIEGELEEALYVSGAVPEQDRGLSKRYDWARSARTDKGVSA 118

Query: 648 VGQVVSGRFYVDPPGLVDRLNSNLASQIRIFGFKRVTPAFSAKKFCDRRRYVYLIPAFAL 469
           VGQVVSGRFY+DPPG VDRLNSNL SQIRIFGFKRVT +FSAKKFCDRRRYVYLIP FAL
Sbjct: 119 VGQVVSGRFYIDPPGFVDRLNSNLPSQIRIFGFKRVTASFSAKKFCDRRRYVYLIPVFAL 178

Query: 468 DPCSHPDRETVLASVGSENELVKCLECSDRGRKVVGVMG--KRSFEFRALNSETVVDXXX 295
           DPC H DRETVLAS+GSENELVKCL CS+RGRKV GV+G  KR+ E  A++    V+   
Sbjct: 179 DPCCHRDRETVLASLGSENELVKCLPCSERGRKVEGVVGNSKRNLELEAVD----VENGS 234

Query: 294 XXXXXXXXXXSEVKAEVVVSLDNDHDDNSKSVQNQDTILS----------SDPMEVSSVT 145
                          EV +S  +D+  N +S+ + +  +S          SD  EV+ + 
Sbjct: 235 SNKNDVVDSGVTKDVEVSLSKGDDNHLNKESINDNEGKVSVEEVNSKTVVSDEDEVAPIN 294

Query: 144 ---------IEDEEANAEEKLAKGS 97
                    +E+E+ N E+  A GS
Sbjct: 295 GGSENNLGILEEEKVNREDTAANGS 319


>gb|ADN34131.1| tRNA pseudouridine synthase family protein [Cucumis melo subsp.
           melo]
          Length = 519

 Score =  297 bits (760), Expect = 5e-78
 Identities = 156/249 (62%), Positives = 189/249 (75%), Gaps = 3/249 (1%)
 Frame = -3

Query: 828 FFAYCGVGYQGMQKNPGAKTIEADLEEALFLSGAVPEQERGNSKRYDWARSARTDKGVSA 649
           FFAYCGVGYQGMQKNPGAKTIEADLEEAL+L+GAVPEQ+RG SKRYDWARSARTDKGVSA
Sbjct: 60  FFAYCGVGYQGMQKNPGAKTIEADLEEALYLAGAVPEQDRGLSKRYDWARSARTDKGVSA 119

Query: 648 VGQVVSGRFYVDPPGLVDRLNSNLASQIRIFGFKRVTPAFSAKKFCDRRRYVYLIPAFAL 469
           VGQVVSGRFY+DPPG VDRLNSNL+ QIRIFG+KRVT +F+AKKFCDRRRYVYLIP FAL
Sbjct: 120 VGQVVSGRFYIDPPGFVDRLNSNLSPQIRIFGYKRVTASFNAKKFCDRRRYVYLIPVFAL 179

Query: 468 DPCSHPDRETVLASVGSENELVKCLECSDRGRKVVGVMGKRSFEFRALNSETVVDXXXXX 289
           DP  H DRE+V AS+GS+NELVKCLECS+RGRKV G+MGKR+FE +   +E+        
Sbjct: 180 DPNCHRDRESVKASLGSDNELVKCLECSERGRKVEGLMGKRNFEVKTAITES-------- 231

Query: 288 XXXXXXXXSEVKAEVVVSLDNDHDDNSKSVQNQDTILSSDPMEVSSVTIED---EEANAE 118
                    ++ + +V ++  +  D   +   +D+  +SD  + +SV +E+   E   A 
Sbjct: 232 ---------DISSNIVNAI--EVSDVQANGVLEDSATTSDSNKQTSVLVENTATELTVAS 280

Query: 117 EKLAKGSSS 91
           E +AK  SS
Sbjct: 281 EGIAKSESS 289


>ref|XP_006604957.1| PREDICTED: LOW QUALITY PROTEIN: tRNA pseudouridine synthase 1-like
           [Glycine max]
          Length = 471

 Score =  296 bits (758), Expect = 9e-78
 Identities = 161/268 (60%), Positives = 191/268 (71%), Gaps = 24/268 (8%)
 Frame = -3

Query: 828 FFAYCGVGYQGMQKNPGAKTIEADLEEALFLSGAVPEQERGNSKRYDWARSARTDKGVSA 649
           FFAYCGVGYQGMQKNPGAKTIE DLEE L++SGAVPEQ+RG  KRYDWARSARTDKGVSA
Sbjct: 59  FFAYCGVGYQGMQKNPGAKTIEGDLEEVLYVSGAVPEQDRGVPKRYDWARSARTDKGVSA 118

Query: 648 VGQVVSGRFYVDPPGLVDRLNSNLASQIRIFGFKRVTPAFSAKKFCDRRRYVYLIPAFAL 469
           VGQVVSGRFY+DPPGLVDRLNSNL SQIRIFG+KRVT +F+AKKFCDRRRYVYLIP FAL
Sbjct: 119 VGQVVSGRFYIDPPGLVDRLNSNLPSQIRIFGYKRVTASFNAKKFCDRRRYVYLIPVFAL 178

Query: 468 DPCSHPDRETVLASVGSENELVKCLECSDRGRKVVGVMG--KRSFEFRALNSETVVDXXX 295
           DP  H DRETV+AS+GS NELVKCLECS+RGRKV+G++G  K++ E  A++ E  +    
Sbjct: 179 DPSCHRDRETVMASLGSGNELVKCLECSERGRKVIGLVGNRKKNLELEAVDVEAGISSNR 238

Query: 294 XXXXXXXXXXSEVKAEVVVSL---DNDH------DDNSKS-------------VQNQDTI 181
                       V  +V VSL   D++H      +DN                VQ + T 
Sbjct: 239 DSG---------VTEDVEVSLSKGDDNHLNEEYGNDNKGGHELXKTGLETMVPVQEEGTP 289

Query: 180 LSSDPMEVSSVTIEDEEANAEEKLAKGS 97
            + + +  S + +EDE+ N E+KL  GS
Sbjct: 290 FNGESVNNSDI-LEDEKVNGEDKLTNGS 316


>ref|XP_007154901.1| hypothetical protein PHAVU_003G157400g [Phaseolus vulgaris]
           gi|561028255|gb|ESW26895.1| hypothetical protein
           PHAVU_003G157400g [Phaseolus vulgaris]
          Length = 556

 Score =  296 bits (758), Expect = 9e-78
 Identities = 160/266 (60%), Positives = 188/266 (70%), Gaps = 22/266 (8%)
 Frame = -3

Query: 828 FFAYCGVGYQGMQKNPGAKTIEADLEEALFLSGAVPEQERGNSKRYDWARSARTDKGVSA 649
           FFAYCGVGYQGMQKNPGAKTIE DLEEAL++SGAVPE +RG  KRYDWARSARTDKGVSA
Sbjct: 28  FFAYCGVGYQGMQKNPGAKTIEGDLEEALYVSGAVPEHDRGIPKRYDWARSARTDKGVSA 87

Query: 648 VGQVVSGRFYVDPPGLVDRLNSNLASQIRIFGFKRVTPAFSAKKFCDRRRYVYLIPAFAL 469
           VGQVVSGRFY+DPPGLVDRLNSNL SQIRIFG+KRVT +F+AKKFCDRRRYVYLIP FAL
Sbjct: 88  VGQVVSGRFYIDPPGLVDRLNSNLHSQIRIFGYKRVTGSFNAKKFCDRRRYVYLIPVFAL 147

Query: 468 DPCSHPDRETVLASVGSENELVKCLECSDRGRKVVGVMG--KRSFEFRAL--------NS 319
           DPC H DRETV+AS+GS NELVKCLECS+RGRKVVG++G  K + E  A+        N+
Sbjct: 148 DPCCHRDRETVMASLGSTNELVKCLECSERGRKVVGLVGNRKHNLELEAMDVEAGISSNT 207

Query: 318 ETVVD-----------XXXXXXXXXXXXXSEVKAEVVVSLDNDHDDNSKSVQNQDTILSS 172
           + V+D                         + K +V+V   N      K +  QD ++  
Sbjct: 208 DVVLDSVVTGDVEASLSKGDDNHLNGESGIDNKGKVLVDGTNLKTGIEKGIPVQDEVMPL 267

Query: 171 DPMEV-SSVTIEDEEANAEEKLAKGS 97
           +   V +S  IE+E+ N E+K   GS
Sbjct: 268 NGESVNNSDIIEEEKMNGEDKSTSGS 293


>ref|XP_007154900.1| hypothetical protein PHAVU_003G157400g [Phaseolus vulgaris]
           gi|593783723|ref|XP_007154902.1| hypothetical protein
           PHAVU_003G157400g [Phaseolus vulgaris]
           gi|561028254|gb|ESW26894.1| hypothetical protein
           PHAVU_003G157400g [Phaseolus vulgaris]
           gi|561028256|gb|ESW26896.1| hypothetical protein
           PHAVU_003G157400g [Phaseolus vulgaris]
          Length = 586

 Score =  296 bits (758), Expect = 9e-78
 Identities = 160/266 (60%), Positives = 188/266 (70%), Gaps = 22/266 (8%)
 Frame = -3

Query: 828 FFAYCGVGYQGMQKNPGAKTIEADLEEALFLSGAVPEQERGNSKRYDWARSARTDKGVSA 649
           FFAYCGVGYQGMQKNPGAKTIE DLEEAL++SGAVPE +RG  KRYDWARSARTDKGVSA
Sbjct: 58  FFAYCGVGYQGMQKNPGAKTIEGDLEEALYVSGAVPEHDRGIPKRYDWARSARTDKGVSA 117

Query: 648 VGQVVSGRFYVDPPGLVDRLNSNLASQIRIFGFKRVTPAFSAKKFCDRRRYVYLIPAFAL 469
           VGQVVSGRFY+DPPGLVDRLNSNL SQIRIFG+KRVT +F+AKKFCDRRRYVYLIP FAL
Sbjct: 118 VGQVVSGRFYIDPPGLVDRLNSNLHSQIRIFGYKRVTGSFNAKKFCDRRRYVYLIPVFAL 177

Query: 468 DPCSHPDRETVLASVGSENELVKCLECSDRGRKVVGVMG--KRSFEFRAL--------NS 319
           DPC H DRETV+AS+GS NELVKCLECS+RGRKVVG++G  K + E  A+        N+
Sbjct: 178 DPCCHRDRETVMASLGSTNELVKCLECSERGRKVVGLVGNRKHNLELEAMDVEAGISSNT 237

Query: 318 ETVVD-----------XXXXXXXXXXXXXSEVKAEVVVSLDNDHDDNSKSVQNQDTILSS 172
           + V+D                         + K +V+V   N      K +  QD ++  
Sbjct: 238 DVVLDSVVTGDVEASLSKGDDNHLNGESGIDNKGKVLVDGTNLKTGIEKGIPVQDEVMPL 297

Query: 171 DPMEV-SSVTIEDEEANAEEKLAKGS 97
           +   V +S  IE+E+ N E+K   GS
Sbjct: 298 NGESVNNSDIIEEEKMNGEDKSTSGS 323


>ref|XP_006435279.1| hypothetical protein CICLE_v10000838mg [Citrus clementina]
           gi|557537401|gb|ESR48519.1| hypothetical protein
           CICLE_v10000838mg [Citrus clementina]
          Length = 526

 Score =  296 bits (757), Expect = 1e-77
 Identities = 162/270 (60%), Positives = 189/270 (70%), Gaps = 26/270 (9%)
 Frame = -3

Query: 828 FFAYCGVGYQGMQKNPGAKTIEADLEEALFLSGAVPEQERGNSKRYDWARSARTDKGVSA 649
           FFAYCGVGYQGMQKNPGAKTIE DLEEALF SGAV E++RGN +RYDWARSARTDKGVSA
Sbjct: 65  FFAYCGVGYQGMQKNPGAKTIEGDLEEALFHSGAVSERDRGNPRRYDWARSARTDKGVSA 124

Query: 648 VGQVVSGRFYVDPPGLVDRLNSNLASQIRIFGFKRVTPAFSAKKFCDRRRYVYLIPAFAL 469
           VGQVVSGRF +DPPGLV+RLNSNL +QIRIFG+KRVT +F+AKKFCD+RRYVYL+P FAL
Sbjct: 125 VGQVVSGRFCIDPPGLVERLNSNLPTQIRIFGYKRVTASFNAKKFCDQRRYVYLLPVFAL 184

Query: 468 DPCSHPDRETVLASVGSENELVKCLECSDRGRKVVGVMGKRSF--------EFRALNSET 313
           D  SH DRE+V+AS+GS NELVKCLECS+RGRKV+GVMGKR++        E  +LNS+ 
Sbjct: 185 DSSSHRDRESVMASLGSGNELVKCLECSERGRKVIGVMGKRTYQLGLPSNDENASLNSQV 244

Query: 312 VVD--------XXXXXXXXXXXXXSEVKAEVVVSLDNDHDDN--------SKSVQNQDTI 181
            VD                       +   V+V   N    N        S++VQN++T 
Sbjct: 245 KVDTVVSTCNGDRHNTNLESVESNKTISESVMVENANSESVNETLVESRTSETVQNENTD 304

Query: 180 LS--SDPMEVSSVTIEDEEANAEEKLAKGS 97
           LS   D    S V  E+   N EEKL KGS
Sbjct: 305 LSLDLDSKNDSKVMAEERSVNGEEKLLKGS 334


>ref|XP_006575306.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like
           isoform X2 [Glycine max]
          Length = 518

 Score =  295 bits (756), Expect = 2e-77
 Identities = 159/265 (60%), Positives = 189/265 (71%), Gaps = 21/265 (7%)
 Frame = -3

Query: 828 FFAYCGVGYQGMQKNPGAKTIEADLEEALFLSGAVPEQERGNSKRYDWARSARTDKGVSA 649
           FFAYCGVGYQGMQKNPGAKTIE DLEEAL++SGAVPEQ+RG  KRYDWARSARTDKGVSA
Sbjct: 25  FFAYCGVGYQGMQKNPGAKTIEGDLEEALYVSGAVPEQDRGVPKRYDWARSARTDKGVSA 84

Query: 648 VGQVVSGRFYVDPPGLVDRLNSNLASQIRIFGFKRVTPAFSAKKFCDRRRYVYLIPAFAL 469
           VGQVVSGRFY+DPPGLVDRLNSNL SQIRIFG+KRVT +F+AKKFCDRRRYVYLIP FAL
Sbjct: 85  VGQVVSGRFYIDPPGLVDRLNSNLPSQIRIFGYKRVTASFNAKKFCDRRRYVYLIPVFAL 144

Query: 468 DPCSHPDRETVLASVGSENELVKCLECSDRGRKVVGVMG--KRSFEFRALNSETVVDXXX 295
           DP  H DRETV+AS+GS NELVKCLECS+RGRKVVG++G  K++ E  A++ E  +    
Sbjct: 145 DPSCHRDRETVMASLGSGNELVKCLECSERGRKVVGLVGNRKQNLELEAVDVEAGISSNR 204

Query: 294 XXXXXXXXXXSEVKAEVVVSLDNDHDDNSKS-------------------VQNQDTILSS 172
                          EV +S  +D+  N +S                   VQ + T L+ 
Sbjct: 205 DSGVTE-------DVEVSLSKGDDNHLNEESGNDNKGGMNCKTGLETVIPVQEEGTPLNG 257

Query: 171 DPMEVSSVTIEDEEANAEEKLAKGS 97
           + +  S + +E+E+ N E+K   GS
Sbjct: 258 ESVNNSDI-LEEEKVNGEDKPTNGS 281


>ref|XP_003519139.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like
           isoform X1 [Glycine max]
          Length = 548

 Score =  295 bits (756), Expect = 2e-77
 Identities = 159/265 (60%), Positives = 189/265 (71%), Gaps = 21/265 (7%)
 Frame = -3

Query: 828 FFAYCGVGYQGMQKNPGAKTIEADLEEALFLSGAVPEQERGNSKRYDWARSARTDKGVSA 649
           FFAYCGVGYQGMQKNPGAKTIE DLEEAL++SGAVPEQ+RG  KRYDWARSARTDKGVSA
Sbjct: 55  FFAYCGVGYQGMQKNPGAKTIEGDLEEALYVSGAVPEQDRGVPKRYDWARSARTDKGVSA 114

Query: 648 VGQVVSGRFYVDPPGLVDRLNSNLASQIRIFGFKRVTPAFSAKKFCDRRRYVYLIPAFAL 469
           VGQVVSGRFY+DPPGLVDRLNSNL SQIRIFG+KRVT +F+AKKFCDRRRYVYLIP FAL
Sbjct: 115 VGQVVSGRFYIDPPGLVDRLNSNLPSQIRIFGYKRVTASFNAKKFCDRRRYVYLIPVFAL 174

Query: 468 DPCSHPDRETVLASVGSENELVKCLECSDRGRKVVGVMG--KRSFEFRALNSETVVDXXX 295
           DP  H DRETV+AS+GS NELVKCLECS+RGRKVVG++G  K++ E  A++ E  +    
Sbjct: 175 DPSCHRDRETVMASLGSGNELVKCLECSERGRKVVGLVGNRKQNLELEAVDVEAGISSNR 234

Query: 294 XXXXXXXXXXSEVKAEVVVSLDNDHDDNSKS-------------------VQNQDTILSS 172
                          EV +S  +D+  N +S                   VQ + T L+ 
Sbjct: 235 DSGVTE-------DVEVSLSKGDDNHLNEESGNDNKGGMNCKTGLETVIPVQEEGTPLNG 287

Query: 171 DPMEVSSVTIEDEEANAEEKLAKGS 97
           + +  S + +E+E+ N E+K   GS
Sbjct: 288 ESVNNSDI-LEEEKVNGEDKPTNGS 311


>ref|XP_002307759.2| hypothetical protein POPTR_0005s26830g [Populus trichocarpa]
           gi|550339814|gb|EEE94755.2| hypothetical protein
           POPTR_0005s26830g [Populus trichocarpa]
          Length = 497

 Score =  294 bits (752), Expect = 4e-77
 Identities = 148/224 (66%), Positives = 173/224 (77%), Gaps = 15/224 (6%)
 Frame = -3

Query: 828 FFAYCGVGYQGMQKNPGAKTIEADLEEALFLSGAVPEQERGNSKRYDWARSARTDKGVSA 649
           F  YCGVGYQGMQKNPGAKTIE DLEEALF +GAVPE +RG  KRYDWARSARTDKGVSA
Sbjct: 59  FLTYCGVGYQGMQKNPGAKTIEGDLEEALFHAGAVPEHDRGIPKRYDWARSARTDKGVSA 118

Query: 648 VGQVVSGRFYVDPPGLVDRLNSNLASQIRIFGFKRVTPAFSAKKFCDRRRYVYLIPAFAL 469
           VGQVVSGRFY+DPPGLV+RL+SNL+ QIRIFG+KRVT +F+AKKFCDRRRYVYLIP FAL
Sbjct: 119 VGQVVSGRFYIDPPGLVERLHSNLSPQIRIFGYKRVTGSFNAKKFCDRRRYVYLIPVFAL 178

Query: 468 DPCSHPDRETVLASVGSENELVKCLECSDRGRKVVGVMGKRSFEFRA------------- 328
           +PCSH DRE+VLAS+GS +ELVKCL+CS+RGRKVVG +GKRSFE ++             
Sbjct: 179 NPCSHRDRESVLASLGSGSELVKCLQCSERGRKVVGAVGKRSFESKSDVSPTEIWSNDKD 238

Query: 327 --LNSETVVDXXXXXXXXXXXXXSEVKAEVVVSLDNDHDDNSKS 202
             L SE   +              E+K E++VS++N  D N+KS
Sbjct: 239 TTLKSEIKEEVSISSNSEDANANPEIKDEIMVSIENGDDKNTKS 282


>ref|XP_004157082.1| PREDICTED: LOW QUALITY PROTEIN: tRNA pseudouridine synthase A,
           mitochondrial-like [Cucumis sativus]
          Length = 519

 Score =  293 bits (750), Expect = 8e-77
 Identities = 153/253 (60%), Positives = 183/253 (72%), Gaps = 14/253 (5%)
 Frame = -3

Query: 828 FFAYCGVGYQGMQKNPGAKTIEADLEEALFLSGAVPEQERGNSKRYDWARSARTDKGVSA 649
           FFAYCGVGYQGMQKNPGAKTIEADLEEAL+L+GAVPEQ+RG SKRYDWARSARTDKGVSA
Sbjct: 60  FFAYCGVGYQGMQKNPGAKTIEADLEEALYLAGAVPEQDRGLSKRYDWARSARTDKGVSA 119

Query: 648 VGQVVSGRFYVDPPGLVDRLNSNLASQIRIFGFKRVTPAFSAKKFCDRRRYVYLIPAFAL 469
           VGQVVSGRFY+DPPG VDRLNSNL+ QIRIFG+KRVT +F+AKKFCDRRRYVYLIP FAL
Sbjct: 120 VGQVVSGRFYIDPPGFVDRLNSNLSPQIRIFGYKRVTASFNAKKFCDRRRYVYLIPVFAL 179

Query: 468 DPCSHPDRETVLASVGSENELVKCLECSDRGRKVVGVMGKRSFEFRALNSETVVDXXXXX 289
           DP  H DRE+V AS+GS+NELVKCLECS+RGRKV G++GKR+FE +   +E+ +      
Sbjct: 180 DPNCHRDRESVKASLGSDNELVKCLECSERGRKVEGLIGKRNFEVKTAITESDISSNTVN 239

Query: 288 XXXXXXXXSEVKAEVVVSLDNDHDDNSKSVQNQDTILS--------SDPMEV------SS 151
                   +    E   +  + +   S  V+N  T L+        S+  E+      S 
Sbjct: 240 AIEVSDVQANGVLEDSATTSDSNKQTSVLVENTATELNVGSEGTAKSESSEMSGLGSDSE 299

Query: 150 VTIEDEEANAEEK 112
           + +  E  N +EK
Sbjct: 300 IVVSKESVNGKEK 312


>ref|XP_004145528.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like
           [Cucumis sativus]
          Length = 519

 Score =  293 bits (750), Expect = 8e-77
 Identities = 153/253 (60%), Positives = 183/253 (72%), Gaps = 14/253 (5%)
 Frame = -3

Query: 828 FFAYCGVGYQGMQKNPGAKTIEADLEEALFLSGAVPEQERGNSKRYDWARSARTDKGVSA 649
           FFAYCGVGYQGMQKNPGAKTIEADLEEAL+L+GAVPEQ+RG SKRYDWARSARTDKGVSA
Sbjct: 60  FFAYCGVGYQGMQKNPGAKTIEADLEEALYLAGAVPEQDRGLSKRYDWARSARTDKGVSA 119

Query: 648 VGQVVSGRFYVDPPGLVDRLNSNLASQIRIFGFKRVTPAFSAKKFCDRRRYVYLIPAFAL 469
           VGQVVSGRFY+DPPG VDRLNSNL+ QIRIFG+KRVT +F+AKKFCDRRRYVYLIP FAL
Sbjct: 120 VGQVVSGRFYIDPPGFVDRLNSNLSPQIRIFGYKRVTASFNAKKFCDRRRYVYLIPVFAL 179

Query: 468 DPCSHPDRETVLASVGSENELVKCLECSDRGRKVVGVMGKRSFEFRALNSETVVDXXXXX 289
           DP  H DRE+V AS+GS+NELVKCLECS+RGRKV G++GKR+FE +   +E+ +      
Sbjct: 180 DPNCHRDRESVKASLGSDNELVKCLECSERGRKVEGLIGKRNFEVKTAITESDISSNTVN 239

Query: 288 XXXXXXXXSEVKAEVVVSLDNDHDDNSKSVQNQDTILS--------SDPMEV------SS 151
                   +    E   +  + +   S  V+N  T L+        S+  E+      S 
Sbjct: 240 AIEVSDVQANGVLEDSATTSDSNKQTSVLVENTATELNVGSEGTAKSESSEMSGLGSDSE 299

Query: 150 VTIEDEEANAEEK 112
           + +  E  N +EK
Sbjct: 300 IVVSKESVNGKEK 312


>ref|XP_006473737.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like
           [Citrus sinensis]
          Length = 526

 Score =  292 bits (748), Expect = 1e-76
 Identities = 160/270 (59%), Positives = 193/270 (71%), Gaps = 26/270 (9%)
 Frame = -3

Query: 828 FFAYCGVGYQGMQKNPGAKTIEADLEEALFLSGAVPEQERGNSKRYDWARSARTDKGVSA 649
           FFAYCGVGYQGMQKNPGAKTIE DLEEALF SGAV E++RGN +RYDWARSARTDKGVSA
Sbjct: 65  FFAYCGVGYQGMQKNPGAKTIEGDLEEALFHSGAVSERDRGNPRRYDWARSARTDKGVSA 124

Query: 648 VGQVVSGRFYVDPPGLVDRLNSNLASQIRIFGFKRVTPAFSAKKFCDRRRYVYLIPAFAL 469
           VGQVVSGRF +DPPGLV+RLN NL +QIRIFG+KRVT +F+AKKFCD+RRYVYL+P FAL
Sbjct: 125 VGQVVSGRFCIDPPGLVERLNYNLPTQIRIFGYKRVTASFNAKKFCDQRRYVYLLPVFAL 184

Query: 468 DPCSHPDRETVLASVGSENELVKCLECSDRGRKVVGVMGKRSF--------EFRALNSET 313
           D  SH DRE+V+AS+GS NELVKCLECS+RGRKV+GVMGKR++        E  +LNS+ 
Sbjct: 185 DSSSHRDRESVMASLGSGNELVKCLECSERGRKVIGVMGKRTYQLGLPSNDENASLNSQV 244

Query: 312 VVD--XXXXXXXXXXXXXSEVKAEVVVS----LDNDHDDN----------SKSVQNQDTI 181
            VD                 V++   +S    ++N + ++          S++VQN++T 
Sbjct: 245 KVDTVVSTCNGDRHNTNLESVESNKTISESAMVENANSESVNETLVESRTSETVQNENTD 304

Query: 180 LS--SDPMEVSSVTIEDEEANAEEKLAKGS 97
           LS   D    S V  E+   N EEKL KGS
Sbjct: 305 LSLDLDSKNDSKVMAEERSVNGEEKLLKGS 334


>ref|XP_004292926.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like
           [Fragaria vesca subsp. vesca]
          Length = 591

 Score =  291 bits (746), Expect = 2e-76
 Identities = 151/247 (61%), Positives = 182/247 (73%), Gaps = 3/247 (1%)
 Frame = -3

Query: 828 FFAYCGVGYQGMQKNPGAKTIEADLEEALFLSGAVPEQERGNSKRYDWARSARTDKGVSA 649
           FFAYCGVGYQGMQKNPGAKTIE DLEEAL+LSGAVPEQ+R N KRYDWARSARTDKGVSA
Sbjct: 56  FFAYCGVGYQGMQKNPGAKTIEGDLEEALYLSGAVPEQDRSNPKRYDWARSARTDKGVSA 115

Query: 648 VGQVVSGRFYVDPPGLVDRLNSNLASQIRIFGFKRVTPAFSAKKFCDRRRYVYLIPAFAL 469
           VGQVVSGRFYVDPPG VDRLNS+L+ QIRIFG+KRVT +F+AKKFCDRRRYVYLIP FAL
Sbjct: 116 VGQVVSGRFYVDPPGFVDRLNSHLSPQIRIFGYKRVTASFNAKKFCDRRRYVYLIPVFAL 175

Query: 468 DPCSHPDRETVLASVGSENELVKCLECSDRGRKVVGVMGKRSFEFR---ALNSETVVDXX 298
           DP +H DRE+V AS+GS+ E VKCLECSDRGRKV G+MGKR+++ R   + NSE+V    
Sbjct: 176 DPSAHRDRESVKASLGSDEEFVKCLECSDRGRKVGGLMGKRTYQLRGGNSYNSESVT--- 232

Query: 297 XXXXXXXXXXXSEVKAEVVVSLDNDHDDNSKSVQNQDTILSSDPMEVSSVTIEDEEANAE 118
                       E+     + +DND       ++ +D ++  +    + +   +E    E
Sbjct: 233 ------------EISTNDDMKIDND-------IEGEDNVVVGN----ADMNSAEEVNGGE 269

Query: 117 EKLAKGS 97
           +K  +GS
Sbjct: 270 KKAVEGS 276