BLASTX nr result
ID: Paeonia25_contig00029765
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Paeonia25_contig00029765
(227 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AEX94368.1| RNA polymerase beta subunit (chloroplast) [Dichel... 51 2e-09
gb|AEX94367.1| RNA polymerase beta subunit (chloroplast) [Dichel... 51 2e-09
gb|AEX94366.1| RNA polymerase beta subunit (chloroplast) [Dichel... 51 2e-09
gb|AEX94365.1| RNA polymerase beta subunit (chloroplast) [Brodia... 51 2e-09
gb|AFB18323.1| RNA polymerase beta subunit, partial [Asparagus o... 49 9e-09
gb|AEX94344.1| RNA polymerase beta subunit (chloroplast) [Hawort... 49 9e-09
gb|AEX94341.1| RNA polymerase beta subunit (chloroplast) [Hemiph... 49 9e-09
gb|AEX94339.1| RNA polymerase beta subunit (chloroplast) [Aspara... 49 9e-09
ref|NP_862746.2| RNA polymerase beta subunit [Calycanthus florid... 48 9e-09
sp|Q7YJX8.1|RPOB_CALFG RecName: Full=DNA-directed RNA polymerase... 48 9e-09
ref|YP_053147.1| RNA polymerase beta subunit [Nymphaea alba] gi|... 49 1e-08
ref|YP_008854586.1| RNA polymerase beta subunit [Curcuma roscoea... 47 2e-08
gb|AFB18327.1| RNA polymerase beta subunit, partial [Chamaedorea... 49 2e-08
ref|YP_007475696.1| RNA polymerase beta subunit [Zingiber specta... 47 2e-08
gb|AGE93362.1| RNA polymerase beta subunit [Alpinia zerumbet] 47 2e-08
ref|YP_007475867.1| RNA polymerase beta subunit [Calamus caryoto... 47 2e-08
ref|YP_784378.1| RNA polymerase beta subunit [Drimys granadensis... 49 2e-08
gb|AHH24325.1| RNA polymerase beta subunit (chloroplast) [Japono... 47 2e-08
gb|AEZ01419.1| RNA polymerase beta subunit (chloroplast) [Japono... 47 2e-08
gb|AGE93276.1| RNA polymerase beta subunit [Chamaedorea seifrizii] 49 2e-08
>gb|AEX94368.1| RNA polymerase beta subunit (chloroplast) [Dichelostemma ida-maia]
Length = 1070
Score = 50.8 bits (120), Expect(2) = 2e-09
Identities = 23/34 (67%), Positives = 27/34 (79%)
Frame = -1
Query: 203 QQHMNWILNLDITPNNTFLLLRDISAVVDHLIGM 102
+++MNW LNLDI NNTFLL RD+ A DHLIGM
Sbjct: 263 RRNMNWRLNLDIPQNNTFLLPRDLLAAADHLIGM 296
Score = 36.6 bits (83), Expect(2) = 2e-09
Identities = 19/33 (57%), Positives = 23/33 (69%), Gaps = 6/33 (18%)
Frame = -3
Query: 90 DINHLKNKCIHF------DQFGLALVRIQKAVR 10
D+NHLKNK I DQFGLALVR++ A+R
Sbjct: 305 DMNHLKNKRIRSVADLLQDQFGLALVRLENAIR 337
>gb|AEX94367.1| RNA polymerase beta subunit (chloroplast) [Dichelostemma congestum]
Length = 1070
Score = 50.8 bits (120), Expect(2) = 2e-09
Identities = 23/34 (67%), Positives = 27/34 (79%)
Frame = -1
Query: 203 QQHMNWILNLDITPNNTFLLLRDISAVVDHLIGM 102
+++MNW LNLDI NNTFLL RD+ A DHLIGM
Sbjct: 263 RRNMNWRLNLDIPQNNTFLLPRDLLAAADHLIGM 296
Score = 36.6 bits (83), Expect(2) = 2e-09
Identities = 19/33 (57%), Positives = 23/33 (69%), Gaps = 6/33 (18%)
Frame = -3
Query: 90 DINHLKNKCIHF------DQFGLALVRIQKAVR 10
D+NHLKNK I DQFGLALVR++ A+R
Sbjct: 305 DMNHLKNKRIRSVADLLQDQFGLALVRLENAIR 337
>gb|AEX94366.1| RNA polymerase beta subunit (chloroplast) [Dichelostemma capitatum]
Length = 1070
Score = 50.8 bits (120), Expect(2) = 2e-09
Identities = 23/34 (67%), Positives = 27/34 (79%)
Frame = -1
Query: 203 QQHMNWILNLDITPNNTFLLLRDISAVVDHLIGM 102
+++MNW LNLDI NNTFLL RD+ A DHLIGM
Sbjct: 263 RRNMNWRLNLDIPQNNTFLLPRDLLAAADHLIGM 296
Score = 36.6 bits (83), Expect(2) = 2e-09
Identities = 19/33 (57%), Positives = 23/33 (69%), Gaps = 6/33 (18%)
Frame = -3
Query: 90 DINHLKNKCIHF------DQFGLALVRIQKAVR 10
D+NHLKNK I DQFGLALVR++ A+R
Sbjct: 305 DMNHLKNKRIRSVADLLQDQFGLALVRLENAIR 337
>gb|AEX94365.1| RNA polymerase beta subunit (chloroplast) [Brodiaea californica]
Length = 1070
Score = 50.8 bits (120), Expect(2) = 2e-09
Identities = 23/34 (67%), Positives = 27/34 (79%)
Frame = -1
Query: 203 QQHMNWILNLDITPNNTFLLLRDISAVVDHLIGM 102
+++MNW LNLDI NNTFLL RD+ A DHLIGM
Sbjct: 263 RRNMNWRLNLDIPQNNTFLLPRDLLAAADHLIGM 296
Score = 36.6 bits (83), Expect(2) = 2e-09
Identities = 19/33 (57%), Positives = 23/33 (69%), Gaps = 6/33 (18%)
Frame = -3
Query: 90 DINHLKNKCIHF------DQFGLALVRIQKAVR 10
D+NHLKNK I DQFGLALVR++ A+R
Sbjct: 305 DMNHLKNKRIRSVADLLQDQFGLALVRLENAIR 337
>gb|AFB18323.1| RNA polymerase beta subunit, partial [Asparagus officinalis]
Length = 1072
Score = 48.5 bits (114), Expect(2) = 9e-09
Identities = 23/34 (67%), Positives = 27/34 (79%)
Frame = -1
Query: 203 QQHMNWILNLDITPNNTFLLLRDISAVVDHLIGM 102
+++MN LNLDI PNNTFLL RD+ A DHLIGM
Sbjct: 266 RRNMNRRLNLDIPPNNTFLLPRDLLAAADHLIGM 299
Score = 36.6 bits (83), Expect(2) = 9e-09
Identities = 19/33 (57%), Positives = 23/33 (69%), Gaps = 6/33 (18%)
Frame = -3
Query: 90 DINHLKNKCIHF------DQFGLALVRIQKAVR 10
D+NHLKNK I DQFGLALVR++ A+R
Sbjct: 308 DMNHLKNKRIRSVADLLQDQFGLALVRLENAIR 340
>gb|AEX94344.1| RNA polymerase beta subunit (chloroplast) [Haworthia cymbiformis]
Length = 1070
Score = 48.5 bits (114), Expect(2) = 9e-09
Identities = 23/34 (67%), Positives = 27/34 (79%)
Frame = -1
Query: 203 QQHMNWILNLDITPNNTFLLLRDISAVVDHLIGM 102
+++MN LNLDI PNNTFLL RD+ A DHLIGM
Sbjct: 263 RRNMNRRLNLDIPPNNTFLLPRDLLAAADHLIGM 296
Score = 36.6 bits (83), Expect(2) = 9e-09
Identities = 19/33 (57%), Positives = 23/33 (69%), Gaps = 6/33 (18%)
Frame = -3
Query: 90 DINHLKNKCIHF------DQFGLALVRIQKAVR 10
D+NHLKNK I DQFGLALVR++ A+R
Sbjct: 305 DMNHLKNKRIRSVADLLQDQFGLALVRLENAIR 337
>gb|AEX94341.1| RNA polymerase beta subunit (chloroplast) [Hemiphylacus
alatostylus]
Length = 1070
Score = 48.5 bits (114), Expect(2) = 9e-09
Identities = 23/34 (67%), Positives = 27/34 (79%)
Frame = -1
Query: 203 QQHMNWILNLDITPNNTFLLLRDISAVVDHLIGM 102
+++MN LNLDI PNNTFLL RD+ A DHLIGM
Sbjct: 263 RRNMNRRLNLDIPPNNTFLLPRDLLAAADHLIGM 296
Score = 36.6 bits (83), Expect(2) = 9e-09
Identities = 19/33 (57%), Positives = 23/33 (69%), Gaps = 6/33 (18%)
Frame = -3
Query: 90 DINHLKNKCIHF------DQFGLALVRIQKAVR 10
D+NHLKNK I DQFGLALVR++ A+R
Sbjct: 305 DMNHLKNKRIRSVADLLQDQFGLALVRLENAIR 337
>gb|AEX94339.1| RNA polymerase beta subunit (chloroplast) [Asparagus officinalis]
gi|372481330|gb|AEX94340.1| RNA polymerase beta subunit
(chloroplast) [Asparagus asparagoides]
Length = 1070
Score = 48.5 bits (114), Expect(2) = 9e-09
Identities = 23/34 (67%), Positives = 27/34 (79%)
Frame = -1
Query: 203 QQHMNWILNLDITPNNTFLLLRDISAVVDHLIGM 102
+++MN LNLDI PNNTFLL RD+ A DHLIGM
Sbjct: 263 RRNMNRRLNLDIPPNNTFLLPRDLLAAADHLIGM 296
Score = 36.6 bits (83), Expect(2) = 9e-09
Identities = 19/33 (57%), Positives = 23/33 (69%), Gaps = 6/33 (18%)
Frame = -3
Query: 90 DINHLKNKCIHF------DQFGLALVRIQKAVR 10
D+NHLKNK I DQFGLALVR++ A+R
Sbjct: 305 DMNHLKNKRIRSVADLLQDQFGLALVRLENAIR 337
>ref|NP_862746.2| RNA polymerase beta subunit [Calycanthus floridus var. glaucus]
Length = 1069
Score = 48.1 bits (113), Expect(2) = 9e-09
Identities = 23/34 (67%), Positives = 28/34 (82%)
Frame = -1
Query: 203 QQHMNWILNLDITPNNTFLLLRDISAVVDHLIGM 102
+++MN LN+DI NNTFLL RD+ AVVDHLIGM
Sbjct: 264 RRNMNRRLNIDIPQNNTFLLPRDVLAVVDHLIGM 297
Score = 37.0 bits (84), Expect(2) = 9e-09
Identities = 20/33 (60%), Positives = 23/33 (69%), Gaps = 6/33 (18%)
Frame = -3
Query: 90 DINHLKNKCIHF------DQFGLALVRIQKAVR 10
D+NHLKNK I DQFGLALVR++ AVR
Sbjct: 306 DMNHLKNKRIRSVADLLQDQFGLALVRLENAVR 338
>sp|Q7YJX8.1|RPOB_CALFG RecName: Full=DNA-directed RNA polymerase subunit beta; AltName:
Full=PEP; AltName: Full=Plastid-encoded RNA polymerase
subunit beta; Short=RNA polymerase subunit beta
gi|32399371|emb|CAD28713.1| RNA polymerase beta subunit
[Calycanthus floridus var. glaucus]
Length = 1060
Score = 48.1 bits (113), Expect(2) = 9e-09
Identities = 23/34 (67%), Positives = 28/34 (82%)
Frame = -1
Query: 203 QQHMNWILNLDITPNNTFLLLRDISAVVDHLIGM 102
+++MN LN+DI NNTFLL RD+ AVVDHLIGM
Sbjct: 255 RRNMNRRLNIDIPQNNTFLLPRDVLAVVDHLIGM 288
Score = 37.0 bits (84), Expect(2) = 9e-09
Identities = 20/33 (60%), Positives = 23/33 (69%), Gaps = 6/33 (18%)
Frame = -3
Query: 90 DINHLKNKCIHF------DQFGLALVRIQKAVR 10
D+NHLKNK I DQFGLALVR++ AVR
Sbjct: 297 DMNHLKNKRIRSVADLLQDQFGLALVRLENAVR 329
>ref|YP_053147.1| RNA polymerase beta subunit [Nymphaea alba]
gi|68053165|sp|Q6EW56.1|RPOB_NYMAL RecName:
Full=DNA-directed RNA polymerase subunit beta; AltName:
Full=PEP; AltName: Full=Plastid-encoded RNA polymerase
subunit beta; Short=RNA polymerase subunit beta
gi|50250319|emb|CAF28585.1| RNA polymerase beta subunit
[Nymphaea alba]
Length = 1071
Score = 49.3 bits (116), Expect(2) = 1e-08
Identities = 23/34 (67%), Positives = 27/34 (79%)
Frame = -1
Query: 203 QQHMNWILNLDITPNNTFLLLRDISAVVDHLIGM 102
+++MN LNLDI PNNTFLL RD+ A DHLIGM
Sbjct: 264 RRNMNQRLNLDIPPNNTFLLPRDVLAAADHLIGM 297
Score = 35.4 bits (80), Expect(2) = 1e-08
Identities = 19/33 (57%), Positives = 22/33 (66%), Gaps = 6/33 (18%)
Frame = -3
Query: 90 DINHLKNKCIHF------DQFGLALVRIQKAVR 10
D+NHLKNK I DQFGLALVR++ VR
Sbjct: 306 DMNHLKNKRIRSVADLLQDQFGLALVRLENVVR 338
>ref|YP_008854586.1| RNA polymerase beta subunit [Curcuma roscoeana]
gi|557637493|gb|AHA13088.1| RNA polymerase beta subunit
[Curcuma roscoeana]
Length = 1082
Score = 47.4 bits (111), Expect(2) = 2e-08
Identities = 23/34 (67%), Positives = 27/34 (79%)
Frame = -1
Query: 203 QQHMNWILNLDITPNNTFLLLRDISAVVDHLIGM 102
+++MN LNLDI NNTFLL RD+ A VDHLIGM
Sbjct: 266 RRNMNRRLNLDIPQNNTFLLPRDVLAAVDHLIGM 299
Score = 37.0 bits (84), Expect(2) = 2e-08
Identities = 20/33 (60%), Positives = 23/33 (69%), Gaps = 6/33 (18%)
Frame = -3
Query: 90 DINHLKNKCIHF------DQFGLALVRIQKAVR 10
D+NHLKNK I DQFGLALVR++ AVR
Sbjct: 308 DMNHLKNKRIRSIADLLQDQFGLALVRLENAVR 340
>gb|AFB18327.1| RNA polymerase beta subunit, partial [Chamaedorea seifrizii]
Length = 1079
Score = 48.9 bits (115), Expect(2) = 2e-08
Identities = 22/34 (64%), Positives = 26/34 (76%)
Frame = -1
Query: 203 QQHMNWILNLDITPNNTFLLLRDISAVVDHLIGM 102
+++MNW LNLDI NN FLL RD+ A DHLIGM
Sbjct: 272 RRNMNWRLNLDIPQNNKFLLPRDVLAAADHLIGM 305
Score = 35.4 bits (80), Expect(2) = 2e-08
Identities = 19/33 (57%), Positives = 23/33 (69%), Gaps = 6/33 (18%)
Frame = -3
Query: 90 DINHLKNKCIHF------DQFGLALVRIQKAVR 10
D+NHLKNK I DQFGLALVR++ AV+
Sbjct: 314 DMNHLKNKRIRSVADLLQDQFGLALVRLENAVQ 346
>ref|YP_007475696.1| RNA polymerase beta subunit [Zingiber spectabile]
gi|449326176|gb|AGE92761.1| RNA polymerase beta subunit
[Zingiber spectabile]
Length = 1075
Score = 47.4 bits (111), Expect(2) = 2e-08
Identities = 23/34 (67%), Positives = 27/34 (79%)
Frame = -1
Query: 203 QQHMNWILNLDITPNNTFLLLRDISAVVDHLIGM 102
+++MN LNLDI NNTFLL RD+ A VDHLIGM
Sbjct: 266 RRNMNRRLNLDIPQNNTFLLPRDVLAAVDHLIGM 299
Score = 37.0 bits (84), Expect(2) = 2e-08
Identities = 20/33 (60%), Positives = 23/33 (69%), Gaps = 6/33 (18%)
Frame = -3
Query: 90 DINHLKNKCIHF------DQFGLALVRIQKAVR 10
D+NHLKNK I DQFGLALVR++ AVR
Sbjct: 308 DMNHLKNKRIRSIADLLQDQFGLALVRLENAVR 340
>gb|AGE93362.1| RNA polymerase beta subunit [Alpinia zerumbet]
Length = 1073
Score = 47.4 bits (111), Expect(2) = 2e-08
Identities = 23/34 (67%), Positives = 27/34 (79%)
Frame = -1
Query: 203 QQHMNWILNLDITPNNTFLLLRDISAVVDHLIGM 102
+++MN LNLDI NNTFLL RD+ A VDHLIGM
Sbjct: 264 RRNMNRRLNLDIPQNNTFLLPRDVLAAVDHLIGM 297
Score = 37.0 bits (84), Expect(2) = 2e-08
Identities = 20/33 (60%), Positives = 23/33 (69%), Gaps = 6/33 (18%)
Frame = -3
Query: 90 DINHLKNKCIHF------DQFGLALVRIQKAVR 10
D+NHLKNK I DQFGLALVR++ AVR
Sbjct: 306 DMNHLKNKRIRSIADLLQDQFGLALVRLENAVR 338
>ref|YP_007475867.1| RNA polymerase beta subunit [Calamus caryotoides]
gi|449326349|gb|AGE92932.1| RNA polymerase beta subunit
[Calamus caryotoides]
Length = 1072
Score = 47.4 bits (111), Expect(2) = 2e-08
Identities = 23/34 (67%), Positives = 26/34 (76%)
Frame = -1
Query: 203 QQHMNWILNLDITPNNTFLLLRDISAVVDHLIGM 102
+Q+MN LNLDI NNTFLL RD+ A DHLIGM
Sbjct: 263 RQNMNRRLNLDIPQNNTFLLPRDVLAAADHLIGM 296
Score = 37.0 bits (84), Expect(2) = 2e-08
Identities = 20/33 (60%), Positives = 23/33 (69%), Gaps = 6/33 (18%)
Frame = -3
Query: 90 DINHLKNKCIHF------DQFGLALVRIQKAVR 10
D+NHLKNK I DQFGLALVR++ AVR
Sbjct: 305 DMNHLKNKRIRSVADLLQDQFGLALVRLENAVR 337
>ref|YP_784378.1| RNA polymerase beta subunit [Drimys granadensis]
gi|122164449|sp|Q06H05.1|RPOB_DRIGR RecName:
Full=DNA-directed RNA polymerase subunit beta; AltName:
Full=PEP; AltName: Full=Plastid-encoded RNA polymerase
subunit beta; Short=RNA polymerase subunit beta
gi|112032654|gb|ABH88289.1| RNA polymerase beta subunit
[Drimys granadensis]
Length = 1071
Score = 48.9 bits (115), Expect(2) = 2e-08
Identities = 22/34 (64%), Positives = 26/34 (76%)
Frame = -1
Query: 203 QQHMNWILNLDITPNNTFLLLRDISAVVDHLIGM 102
+++MNW LNLDI NN FLL RD+ A DHLIGM
Sbjct: 263 RRNMNWRLNLDIPQNNLFLLPRDVLAAADHLIGM 296
Score = 35.4 bits (80), Expect(2) = 2e-08
Identities = 19/33 (57%), Positives = 22/33 (66%), Gaps = 6/33 (18%)
Frame = -3
Query: 90 DINHLKNKCIHF------DQFGLALVRIQKAVR 10
D+NHLKNK I DQFGLALVR++ VR
Sbjct: 305 DMNHLKNKRIRSVADLLQDQFGLALVRLENVVR 337
>gb|AHH24325.1| RNA polymerase beta subunit (chloroplast) [Japonolirion osense]
Length = 1070
Score = 47.4 bits (111), Expect(2) = 2e-08
Identities = 23/34 (67%), Positives = 27/34 (79%)
Frame = -1
Query: 203 QQHMNWILNLDITPNNTFLLLRDISAVVDHLIGM 102
+++MN LNLDI NNTFLL RD+ A VDHLIGM
Sbjct: 263 RRNMNRRLNLDIPQNNTFLLPRDVLAAVDHLIGM 296
Score = 37.0 bits (84), Expect(2) = 2e-08
Identities = 20/33 (60%), Positives = 23/33 (69%), Gaps = 6/33 (18%)
Frame = -3
Query: 90 DINHLKNKCIHF------DQFGLALVRIQKAVR 10
D+NHLKNK I DQFGLALVR++ AVR
Sbjct: 305 DMNHLKNKRIRSVADLLQDQFGLALVRLENAVR 337
>gb|AEZ01419.1| RNA polymerase beta subunit (chloroplast) [Japonolirion osense]
Length = 1070
Score = 47.4 bits (111), Expect(2) = 2e-08
Identities = 23/34 (67%), Positives = 27/34 (79%)
Frame = -1
Query: 203 QQHMNWILNLDITPNNTFLLLRDISAVVDHLIGM 102
+++MN LNLDI NNTFLL RD+ A VDHLIGM
Sbjct: 263 RRNMNRRLNLDIPQNNTFLLPRDVLAAVDHLIGM 296
Score = 37.0 bits (84), Expect(2) = 2e-08
Identities = 20/33 (60%), Positives = 23/33 (69%), Gaps = 6/33 (18%)
Frame = -3
Query: 90 DINHLKNKCIHF------DQFGLALVRIQKAVR 10
D+NHLKNK I DQFGLALVR++ AVR
Sbjct: 305 DMNHLKNKRIRSVADLLQDQFGLALVRLENAVR 337
>gb|AGE93276.1| RNA polymerase beta subunit [Chamaedorea seifrizii]
Length = 1068
Score = 48.9 bits (115), Expect(2) = 2e-08
Identities = 22/34 (64%), Positives = 26/34 (76%)
Frame = -1
Query: 203 QQHMNWILNLDITPNNTFLLLRDISAVVDHLIGM 102
+++MNW LNLDI NN FLL RD+ A DHLIGM
Sbjct: 261 RRNMNWRLNLDIPQNNKFLLPRDVLAAADHLIGM 294
Score = 35.4 bits (80), Expect(2) = 2e-08
Identities = 19/33 (57%), Positives = 23/33 (69%), Gaps = 6/33 (18%)
Frame = -3
Query: 90 DINHLKNKCIHF------DQFGLALVRIQKAVR 10
D+NHLKNK I DQFGLALVR++ AV+
Sbjct: 303 DMNHLKNKRIRSVADLLQDQFGLALVRLENAVQ 335