BLASTX nr result

ID: Paeonia25_contig00028574 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia25_contig00028574
         (338 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD28730.1| Ribonuclease H [Medicago truncatula]                    58   1e-07
ref|XP_003621690.1| Cytochrome c biogenesis protein ccsA [Medica...    57   3e-06

>gb|ABD28730.1| Ribonuclease H [Medicago truncatula]
          Length = 409

 Score = 58.2 bits (139), Expect(2) = 1e-07
 Identities = 24/57 (42%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
 Frame = +1

Query: 163 SFLVWRLLYRRIVVDEELLKRGI-LVSICYGYCNREMETLEHLFLKCDPAAILWTWL 330
           +F+ WR L+ ++  D+ L KRG  +VSIC  +C ++ ET  H+FL+C     LW WL
Sbjct: 85  AFITWRFLHNKLPTDDNLRKRGCYIVSICCCFCRKQAETSSHIFLQCPVTLQLWDWL 141



 Score = 23.5 bits (49), Expect(2) = 1e-07
 Identities = 17/47 (36%), Positives = 21/47 (44%)
 Frame = +2

Query: 5   IDLPVDYHEDYLI*PKSKDGNPCFKDVNEFYRIHSPMQTNFQPLWNS 145
           I LP+D   D LI   S DG+   K    F   H P     + LWN+
Sbjct: 32  IALPLDETLDKLIWTDSVDGDLSNKLAFSFLPGHGPTVHWAKMLWNA 78


>ref|XP_003621690.1| Cytochrome c biogenesis protein ccsA [Medicago truncatula]
           gi|355496705|gb|AES77908.1| Cytochrome c biogenesis
           protein ccsA [Medicago truncatula]
          Length = 666

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 25/57 (43%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
 Frame = +1

Query: 163 SFLVWRLLYRRIVVDEELLKRG-ILVSICYGYCNREMETLEHLFLKCDPAAILWTWL 330
           SF+ WRLL+ ++  DE L KRG ++VSIC  +C +  E+ +H+F +C   + LW WL
Sbjct: 50  SFITWRLLHNKLPTDENLRKRGCLIVSICC-FCMKSAESSQHIFFECHVTSRLWDWL 105


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