BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia25_contig00026325
         (251 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AGW97687.1| RNA polymerase beta (chloroplast) [Ipomoea pedice...    94   2e-20
ref|XP_006360368.1| PREDICTED: DNA-directed RNA polymerase subun...    99   6e-19
ref|YP_008963385.1| RNA polymerase beta (chloroplast) [Sedum sar...    97   2e-18
prf||1211235Q rpoC-like ORF 548                                        97   2e-18
ref|XP_003605607.1| DNA-directed RNA polymerase subunit beta, pa...    89   3e-18
ref|XP_003606033.1| DNA-directed RNA polymerase [Medicago trunca...    89   3e-18
ref|XP_003600568.1| DNA-directed RNA polymerase beta' subunit [M...    89   3e-18
ref|XP_004516189.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...    87   7e-18
ref|XP_004174097.1| PREDICTED: DNA-directed RNA polymerase subun...    94   3e-17
ref|YP_008592630.1| RNA polymerase beta (chloroplast) [Berberis ...    92   7e-17
dbj|BAM34114.1| DNA-directed RNA polymerase subunit gamma, parti...    92   7e-17
dbj|BAM34034.1| DNA-directed RNA polymerase subunit gamma, parti...    92   7e-17
ref|YP_009020211.1| RNA polymerase beta (chloroplast) [Castanops...    92   1e-16
ref|YP_008593102.1| DNA-directed RNA polymerase beta' subunit (c...    92   1e-16
ref|YP_008520130.1| DNA-directed RNA polymerase beta' subunit (c...    92   1e-16
ref|YP_008592924.1| DNA-directed RNA polymerase beta' subunit (c...    92   1e-16
ref|YP_008592837.1| DNA-directed RNA polymerase beta' subunit (c...    92   1e-16
ref|YP_008592748.1| DNA-directed RNA polymerase beta' subunit (c...    92   1e-16
ref|YP_008992455.1| RNA polymerase beta (chloroplast) [Gossypium...    92   1e-16
ref|YP_004285995.1| RNA polymerase beta [Gossypium thurberi] gi|...    92   1e-16

>gb|AGW97687.1| RNA polymerase beta (chloroplast) [Ipomoea pedicellaris]
          Length = 718

 Score = 94.0 bits (232), Expect(2) = 2e-20
 Identities = 43/48 (89%), Positives = 44/48 (91%)
 Frame = +2

Query: 107 GGDQIESYPNFSFARPVAKKPTFLRLRGSFEYEIQSWKYSIPLFFTTQ 250
           GG  IESYPNFSFARP+ KKPTFLRLRG FEYEIQSWKYSIPLFFTTQ
Sbjct: 173 GGAPIESYPNFSFARPITKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQ 220



 Score = 30.8 bits (68), Expect(2) = 2e-20
 Identities = 13/16 (81%), Positives = 14/16 (87%)
 Frame = +3

Query: 63  YLSRMRGNSHVRFWRG 110
           YLSRM+GN HVRF RG
Sbjct: 158 YLSRMKGNIHVRFRRG 173


>ref|XP_006360368.1| PREDICTED: DNA-directed RNA polymerase subunit beta'-like [Solanum
           tuberosum]
          Length = 581

 Score = 99.0 bits (245), Expect = 6e-19
 Identities = 46/55 (83%), Positives = 49/55 (89%)
 Frame = +2

Query: 86  LSCSILEGGDQIESYPNFSFARPVAKKPTFLRLRGSFEYEIQSWKYSIPLFFTTQ 250
           +S S  +GGD IESYPNFSFARP+ KKPTFLRLRG FEYEIQSWKYSIPLFFTTQ
Sbjct: 28  ISNSHAQGGDPIESYPNFSFARPITKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQ 82


>ref|YP_008963385.1| RNA polymerase beta (chloroplast) [Sedum sarmentosum]
           gi|402797520|gb|AFQ99052.1| RNA polymerase beta
           (chloroplast) [Sedum sarmentosum]
          Length = 552

 Score = 97.4 bits (241), Expect = 2e-18
 Identities = 45/51 (88%), Positives = 47/51 (92%)
 Frame = +2

Query: 98  ILEGGDQIESYPNFSFARPVAKKPTFLRLRGSFEYEIQSWKYSIPLFFTTQ 250
           IL+GGD   SYPNFSFARP+AKKPTFLRLRG FEYEIQSWKYSIPLFFTTQ
Sbjct: 2   ILKGGDPTGSYPNFSFARPIAKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQ 52


>prf||1211235Q rpoC-like ORF 548
          Length = 548

 Score = 97.1 bits (240), Expect = 2e-18
 Identities = 44/48 (91%), Positives = 45/48 (93%)
 Frame = +2

Query: 107 GGDQIESYPNFSFARPVAKKPTFLRLRGSFEYEIQSWKYSIPLFFTTQ 250
           GGD IESYPNFSFARP+ KKPTFLRLRG FEYEIQSWKYSIPLFFTTQ
Sbjct: 2   GGDPIESYPNFSFARPITKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQ 49


>ref|XP_003605607.1| DNA-directed RNA polymerase subunit beta, partial [Medicago
           truncatula] gi|355506662|gb|AES87804.1| DNA-directed RNA
           polymerase subunit beta, partial [Medicago truncatula]
          Length = 2049

 Score = 88.6 bits (218), Expect(2) = 3e-18
 Identities = 41/44 (93%), Positives = 41/44 (93%)
 Frame = +2

Query: 119 IESYPNFSFARPVAKKPTFLRLRGSFEYEIQSWKYSIPLFFTTQ 250
           I SYPNFSFARPV KKPTFLRLRGSFEYEIQSWKYSIPLFF TQ
Sbjct: 609 IGSYPNFSFARPVVKKPTFLRLRGSFEYEIQSWKYSIPLFFATQ 652



 Score = 28.9 bits (63), Expect(2) = 3e-18
 Identities = 12/15 (80%), Positives = 13/15 (86%)
 Frame = +3

Query: 72  RMRGNSHVRFWRGEI 116
           RMRGN HVRF +GEI
Sbjct: 592 RMRGNPHVRFSKGEI 606


>ref|XP_003606033.1| DNA-directed RNA polymerase [Medicago truncatula]
            gi|355507088|gb|AES88230.1| DNA-directed RNA polymerase
            [Medicago truncatula]
          Length = 1748

 Score = 88.6 bits (218), Expect(2) = 3e-18
 Identities = 41/44 (93%), Positives = 41/44 (93%)
 Frame = +2

Query: 119  IESYPNFSFARPVAKKPTFLRLRGSFEYEIQSWKYSIPLFFTTQ 250
            I SYPNFSFARPV KKPTFLRLRGSFEYEIQSWKYSIPLFF TQ
Sbjct: 1215 IGSYPNFSFARPVVKKPTFLRLRGSFEYEIQSWKYSIPLFFATQ 1258



 Score = 28.9 bits (63), Expect(2) = 3e-18
 Identities = 12/15 (80%), Positives = 13/15 (86%)
 Frame = +3

Query: 72   RMRGNSHVRFWRGEI 116
            RMRGN HVRF +GEI
Sbjct: 1198 RMRGNPHVRFSKGEI 1212


>ref|XP_003600568.1| DNA-directed RNA polymerase beta' subunit [Medicago truncatula]
           gi|357460575|ref|XP_003600569.1| DNA-directed RNA
           polymerase beta' subunit [Medicago truncatula]
           gi|355489616|gb|AES70819.1| DNA-directed RNA polymerase
           beta' subunit [Medicago truncatula]
           gi|355489617|gb|AES70820.1| DNA-directed RNA polymerase
           beta' subunit [Medicago truncatula]
          Length = 710

 Score = 88.6 bits (218), Expect(2) = 3e-18
 Identities = 41/44 (93%), Positives = 41/44 (93%)
 Frame = +2

Query: 119 IESYPNFSFARPVAKKPTFLRLRGSFEYEIQSWKYSIPLFFTTQ 250
           I SYPNFSFARPV KKPTFLRLRGSFEYEIQSWKYSIPLFF TQ
Sbjct: 163 IGSYPNFSFARPVVKKPTFLRLRGSFEYEIQSWKYSIPLFFATQ 206



 Score = 28.9 bits (63), Expect(2) = 3e-18
 Identities = 12/15 (80%), Positives = 13/15 (86%)
 Frame = +3

Query: 72  RMRGNSHVRFWRGEI 116
           RMRGN HVRF +GEI
Sbjct: 146 RMRGNPHVRFSKGEI 160


>ref|XP_004516189.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase subunit
            beta-like [Cicer arietinum]
          Length = 1747

 Score = 87.0 bits (214), Expect(2) = 7e-18
 Identities = 39/42 (92%), Positives = 40/42 (95%)
 Frame = +2

Query: 125  SYPNFSFARPVAKKPTFLRLRGSFEYEIQSWKYSIPLFFTTQ 250
            SYPNFSFARP+ KKPTFLRLRGSFEYEIQSWKYSIPLFF TQ
Sbjct: 1218 SYPNFSFARPIIKKPTFLRLRGSFEYEIQSWKYSIPLFFATQ 1259



 Score = 28.9 bits (63), Expect(2) = 7e-18
 Identities = 12/15 (80%), Positives = 13/15 (86%)
 Frame = +3

Query: 72   RMRGNSHVRFWRGEI 116
            RMRGN HVRF +GEI
Sbjct: 1198 RMRGNPHVRFSKGEI 1212


>ref|XP_004174097.1| PREDICTED: DNA-directed RNA polymerase subunit beta'-like, partial
           [Cucumis sativus]
          Length = 471

 Score = 93.6 bits (231), Expect = 3e-17
 Identities = 43/46 (93%), Positives = 44/46 (95%)
 Frame = +2

Query: 113 DQIESYPNFSFARPVAKKPTFLRLRGSFEYEIQSWKYSIPLFFTTQ 250
           D I SYPNFSFARP+AKKPTFLRLRGSFEYEIQSWKYSIPLFFTTQ
Sbjct: 3   DPIVSYPNFSFARPIAKKPTFLRLRGSFEYEIQSWKYSIPLFFTTQ 48


>ref|YP_008592630.1| RNA polymerase beta (chloroplast) [Berberis bealei]
           gi|536462671|gb|AGU37036.1| RNA polymerase beta
           (chloroplast) [Berberis bealei]
          Length = 684

 Score = 92.0 bits (227), Expect = 7e-17
 Identities = 44/50 (88%), Positives = 45/50 (90%)
 Frame = +2

Query: 101 LEGGDQIESYPNFSFARPVAKKPTFLRLRGSFEYEIQSWKYSIPLFFTTQ 250
           LEG    + YPNFSFARPVAKKPTFLRLRGSFEYEIQSWKYSIPLFFTTQ
Sbjct: 137 LEGLVYCDVYPNFSFARPVAKKPTFLRLRGSFEYEIQSWKYSIPLFFTTQ 186


>dbj|BAM34114.1| DNA-directed RNA polymerase subunit gamma, partial (chloroplast)
           [Zelkova serrata]
          Length = 156

 Score = 92.0 bits (227), Expect = 7e-17
 Identities = 44/50 (88%), Positives = 45/50 (90%)
 Frame = +2

Query: 101 LEGGDQIESYPNFSFARPVAKKPTFLRLRGSFEYEIQSWKYSIPLFFTTQ 250
           LEG    + YPNFSFARPVAKKPTFLRLRGSFEYEIQSWKYSIPLFFTTQ
Sbjct: 47  LEGLVYCDVYPNFSFARPVAKKPTFLRLRGSFEYEIQSWKYSIPLFFTTQ 96


>dbj|BAM34034.1| DNA-directed RNA polymerase subunit gamma, partial (chloroplast)
           [Zelkova serrata] gi|396940378|dbj|BAM34050.1|
           DNA-directed RNA polymerase subunit gamma, partial
           (chloroplast) [Zelkova serrata]
           gi|396940404|dbj|BAM34066.1| DNA-directed RNA polymerase
           subunit gamma, partial (chloroplast) [Zelkova serrata]
           gi|396940430|dbj|BAM34082.1| DNA-directed RNA polymerase
           subunit gamma, partial (chloroplast) [Zelkova serrata]
           gi|396940456|dbj|BAM34098.1| DNA-directed RNA polymerase
           subunit gamma, partial (chloroplast) [Zelkova serrata]
           gi|396940508|dbj|BAM34130.1| DNA-directed RNA polymerase
           subunit gamma, partial (chloroplast) [Zelkova serrata]
           gi|396940534|dbj|BAM34146.1| DNA-directed RNA polymerase
           subunit gamma, partial (chloroplast) [Zelkova serrata]
           gi|396940560|dbj|BAM34162.1| DNA-directed RNA polymerase
           subunit gamma, partial (chloroplast) [Zelkova serrata]
           gi|396940586|dbj|BAM34178.1| DNA-directed RNA polymerase
           subunit gamma, partial (chloroplast) [Zelkova serrata]
           gi|396940612|dbj|BAM34194.1| DNA-directed RNA polymerase
           subunit gamma, partial (chloroplast) [Zelkova serrata]
           gi|396940638|dbj|BAM34210.1| DNA-directed RNA polymerase
           subunit gamma, partial (chloroplast) [Zelkova serrata]
           gi|396940664|dbj|BAM34226.1| DNA-directed RNA polymerase
           subunit gamma, partial (chloroplast) [Zelkova serrata]
           gi|396940690|dbj|BAM34242.1| DNA-directed RNA polymerase
           subunit gamma, partial (chloroplast) [Zelkova serrata]
          Length = 156

 Score = 92.0 bits (227), Expect = 7e-17
 Identities = 44/50 (88%), Positives = 45/50 (90%)
 Frame = +2

Query: 101 LEGGDQIESYPNFSFARPVAKKPTFLRLRGSFEYEIQSWKYSIPLFFTTQ 250
           LEG    + YPNFSFARPVAKKPTFLRLRGSFEYEIQSWKYSIPLFFTTQ
Sbjct: 47  LEGLVYCDVYPNFSFARPVAKKPTFLRLRGSFEYEIQSWKYSIPLFFTTQ 96


>ref|YP_009020211.1| RNA polymerase beta (chloroplast) [Castanopsis echinocarpa]
           gi|589387942|gb|AHL16898.1| RNA polymerase beta
           (chloroplast) [Castanopsis echinocarpa]
          Length = 686

 Score = 91.7 bits (226), Expect = 1e-16
 Identities = 43/50 (86%), Positives = 45/50 (90%)
 Frame = +2

Query: 101 LEGGDQIESYPNFSFARPVAKKPTFLRLRGSFEYEIQSWKYSIPLFFTTQ 250
           LEG    + YPNFSFARP+AKKPTFLRLRGSFEYEIQSWKYSIPLFFTTQ
Sbjct: 137 LEGLVYCDVYPNFSFARPIAKKPTFLRLRGSFEYEIQSWKYSIPLFFTTQ 186


>ref|YP_008593102.1| DNA-directed RNA polymerase beta' subunit (chloroplast) [Camellia
           yunnanensis] gi|537362855|gb|AGU44658.1| DNA-directed
           RNA polymerase beta' subunit (chloroplast) [Camellia
           yunnanensis]
          Length = 686

 Score = 91.7 bits (226), Expect = 1e-16
 Identities = 43/50 (86%), Positives = 45/50 (90%)
 Frame = +2

Query: 101 LEGGDQIESYPNFSFARPVAKKPTFLRLRGSFEYEIQSWKYSIPLFFTTQ 250
           LEG    + YPNFSFARP+AKKPTFLRLRGSFEYEIQSWKYSIPLFFTTQ
Sbjct: 137 LEGLVYCDVYPNFSFARPIAKKPTFLRLRGSFEYEIQSWKYSIPLFFTTQ 186


>ref|YP_008520130.1| DNA-directed RNA polymerase beta' subunit (chloroplast) [Camellia
           taliensis] gi|537362675|gb|AGU44480.1| DNA-directed RNA
           polymerase beta' subunit (chloroplast) [Camellia
           taliensis] gi|537362945|gb|AGU44747.1| DNA-directed RNA
           polymerase beta' subunit (chloroplast) [Camellia
           taliensis]
          Length = 686

 Score = 91.7 bits (226), Expect = 1e-16
 Identities = 43/50 (86%), Positives = 45/50 (90%)
 Frame = +2

Query: 101 LEGGDQIESYPNFSFARPVAKKPTFLRLRGSFEYEIQSWKYSIPLFFTTQ 250
           LEG    + YPNFSFARP+AKKPTFLRLRGSFEYEIQSWKYSIPLFFTTQ
Sbjct: 137 LEGLVYCDVYPNFSFARPIAKKPTFLRLRGSFEYEIQSWKYSIPLFFTTQ 186


>ref|YP_008592924.1| DNA-directed RNA polymerase beta' subunit (chloroplast) [Camellia
           impressinervis] gi|537362585|gb|AGU44391.1| DNA-directed
           RNA polymerase beta' subunit (chloroplast) [Camellia
           impressinervis]
          Length = 686

 Score = 91.7 bits (226), Expect = 1e-16
 Identities = 43/50 (86%), Positives = 45/50 (90%)
 Frame = +2

Query: 101 LEGGDQIESYPNFSFARPVAKKPTFLRLRGSFEYEIQSWKYSIPLFFTTQ 250
           LEG    + YPNFSFARP+AKKPTFLRLRGSFEYEIQSWKYSIPLFFTTQ
Sbjct: 137 LEGLVYCDVYPNFSFARPIAKKPTFLRLRGSFEYEIQSWKYSIPLFFTTQ 186


>ref|YP_008592837.1| DNA-directed RNA polymerase beta' subunit (chloroplast) [Camellia
           danzaiensis] gi|552546184|ref|YP_008593013.1|
           DNA-directed RNA polymerase beta' subunit (chloroplast)
           [Camellia pitardii] gi|537362497|gb|AGU44304.1|
           DNA-directed RNA polymerase beta' subunit (chloroplast)
           [Camellia danzaiensis] gi|537362765|gb|AGU44569.1|
           DNA-directed RNA polymerase beta' subunit (chloroplast)
           [Camellia pitardii]
          Length = 686

 Score = 91.7 bits (226), Expect = 1e-16
 Identities = 43/50 (86%), Positives = 45/50 (90%)
 Frame = +2

Query: 101 LEGGDQIESYPNFSFARPVAKKPTFLRLRGSFEYEIQSWKYSIPLFFTTQ 250
           LEG    + YPNFSFARP+AKKPTFLRLRGSFEYEIQSWKYSIPLFFTTQ
Sbjct: 137 LEGLVYCDVYPNFSFARPIAKKPTFLRLRGSFEYEIQSWKYSIPLFFTTQ 186


>ref|YP_008592748.1| DNA-directed RNA polymerase beta' subunit (chloroplast) [Camellia
           cuspidata] gi|537362407|gb|AGU44215.1| DNA-directed RNA
           polymerase beta' subunit (chloroplast) [Camellia
           cuspidata]
          Length = 686

 Score = 91.7 bits (226), Expect = 1e-16
 Identities = 43/50 (86%), Positives = 45/50 (90%)
 Frame = +2

Query: 101 LEGGDQIESYPNFSFARPVAKKPTFLRLRGSFEYEIQSWKYSIPLFFTTQ 250
           LEG    + YPNFSFARP+AKKPTFLRLRGSFEYEIQSWKYSIPLFFTTQ
Sbjct: 137 LEGLVYCDVYPNFSFARPIAKKPTFLRLRGSFEYEIQSWKYSIPLFFTTQ 186


>ref|YP_008992455.1| RNA polymerase beta (chloroplast) [Gossypium anomalum]
           gi|570758959|ref|YP_008992541.1| RNA polymerase beta
           (chloroplast) [Gossypium bickii]
           gi|570759047|ref|YP_008992886.1| RNA polymerase beta
           (chloroplast) [Gossypium sturtianum]
           gi|570759567|ref|YP_008992628.1| RNA polymerase beta
           (chloroplast) [Gossypium herbaceum]
           gi|570759654|ref|YP_008992714.1| RNA polymerase beta
           (chloroplast) [Gossypium longicalyx]
           gi|570879904|ref|YP_008992800.1| RNA polymerase beta
           (chloroplast) [Gossypium stocksii]
           gi|326457030|gb|ADZ74294.1| RNA polymerase beta
           [Gossypium anomalum] gi|326457118|gb|ADZ74381.1| RNA
           polymerase beta [Gossypium bickii]
           gi|326457206|gb|ADZ74468.1| RNA polymerase beta
           [Gossypium herbaceum] gi|326457293|gb|ADZ74554.1| RNA
           polymerase beta [Gossypium longicalyx]
           gi|326457379|gb|ADZ74639.1| RNA polymerase beta
           [Gossypium stocksii] gi|326457467|gb|ADZ74726.1| RNA
           polymerase beta [Gossypium sturtianum]
          Length = 689

 Score = 91.7 bits (226), Expect = 1e-16
 Identities = 43/50 (86%), Positives = 45/50 (90%)
 Frame = +2

Query: 101 LEGGDQIESYPNFSFARPVAKKPTFLRLRGSFEYEIQSWKYSIPLFFTTQ 250
           LEG    + YPNFSFARP+AKKPTFLRLRGSFEYEIQSWKYSIPLFFTTQ
Sbjct: 137 LEGLVYCDVYPNFSFARPIAKKPTFLRLRGSFEYEIQSWKYSIPLFFTTQ 186


>ref|YP_004285995.1| RNA polymerase beta [Gossypium thurberi]
           gi|290775783|gb|ADD62279.1| RNA polymerase beta
           [Gossypium thurberi]
          Length = 689

 Score = 91.7 bits (226), Expect = 1e-16
 Identities = 43/50 (86%), Positives = 45/50 (90%)
 Frame = +2

Query: 101 LEGGDQIESYPNFSFARPVAKKPTFLRLRGSFEYEIQSWKYSIPLFFTTQ 250
           LEG    + YPNFSFARP+AKKPTFLRLRGSFEYEIQSWKYSIPLFFTTQ
Sbjct: 137 LEGLVYCDVYPNFSFARPIAKKPTFLRLRGSFEYEIQSWKYSIPLFFTTQ 186