BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia25_contig00025455
         (1698 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21137.3| unnamed protein product [Vitis vinifera]              655   0.0  
ref|XP_002283296.1| PREDICTED: DNA-directed RNA polymerase D sub...   652   0.0  
ref|XP_006442883.1| hypothetical protein CICLE_v10018562mg [Citr...   639   e-180
ref|XP_006351506.1| PREDICTED: DNA-directed RNA polymerases IV a...   614   e-173
ref|XP_006364477.1| PREDICTED: DNA-directed RNA polymerases IV a...   613   e-173
gb|EXB86677.1| DNA-directed RNA polymerase D subunit 2a [Morus n...   612   e-172
ref|XP_004236361.1| PREDICTED: DNA-directed RNA polymerase D sub...   612   e-172
ref|XP_007225442.1| hypothetical protein PRUPE_ppa000410mg [Prun...   610   e-172
ref|XP_007011719.1| DNA-directed RNA polymerase isoform 3 [Theob...   607   e-171
ref|XP_007011717.1| DNA-directed RNA polymerase isoform 1 [Theob...   607   e-171
ref|XP_004245914.1| PREDICTED: DNA-directed RNA polymerase D sub...   607   e-171
gb|AAY68206.1| RNA polymerase IV second largest subunit [Solanum...   606   e-171
ref|XP_004145500.1| PREDICTED: DNA-directed RNA polymerase D sub...   604   e-170
ref|XP_004157128.1| PREDICTED: DNA-directed RNA polymerase D sub...   604   e-170
ref|XP_002324332.2| DNA-directed RNA polymerase family protein [...   603   e-170
gb|ABG29321.1| DNA-directed RNA polymerase, putative [Solanum bu...   602   e-169
ref|XP_004288915.1| PREDICTED: DNA-directed RNA polymerase D sub...   598   e-168
ref|XP_002515428.1| DNA-directed RNA polymerase subunit, putativ...   594   e-167
gb|EYU29217.1| hypothetical protein MIMGU_mgv1a000367mg [Mimulus...   576   e-161
ref|XP_004501385.1| PREDICTED: DNA-directed RNA polymerase D sub...   566   e-158

>emb|CBI21137.3| unnamed protein product [Vitis vinifera]
          Length = 1220

 Score =  655 bits (1690), Expect = 0.0
 Identities = 331/508 (65%), Positives = 396/508 (77%), Gaps = 11/508 (2%)
 Frame = -1

Query: 1491 SIHILILMGISK---DTGTSSKNGN-LSNGVXXXXXXXXXXXXXXXDGFEMDMTEVRDLG 1324
            +++I  LMG S    D G SS  G  LSNGV                   M   E+ DL 
Sbjct: 30   NLNISTLMGASDAKGDLGMSSSMGEKLSNGVQMEIDDDL-----------MGSIEIDDLN 78

Query: 1323 EVFLNNFCKKASMAFFNEYGLISHQINSYNEFTKTGIQNLFDSIGEIVVEPGYDPSRKGE 1144
            + +L  FCKK +++FFNEYGLI HQINS+N+F K GIQ +FDS GEI VEPGYDPS++GE
Sbjct: 79   KEYLKTFCKKVAVSFFNEYGLIQHQINSFNDFIKNGIQRVFDSFGEIPVEPGYDPSKRGE 138

Query: 1143 NGWRYASLKFGKVTLEPPKLWSGDQ-GDEFLNFLPRHARLQNMTYSSRMKVQIHFQVYTQ 967
              WRYAS++FGKVTLE P++W+G+  G E LNFLPRHARLQNMTYSSRMK Q+HFQVYTQ
Sbjct: 139  GDWRYASVRFGKVTLERPRVWAGESDGKESLNFLPRHARLQNMTYSSRMKAQVHFQVYTQ 198

Query: 966  ALVRSDKFKTGQE-QYLQKDVLSEESRDILIGRIPVMVKSDLCWMHKAEKGDCDFDHGGY 790
             LVRSDK+KTG++ +Y++K V+ E++RDILIGRIPVMVKS+LCWM+  E+GDC++DHGGY
Sbjct: 199  KLVRSDKYKTGKDNKYVEKKVIFEDNRDILIGRIPVMVKSELCWMNGVERGDCEYDHGGY 258

Query: 789  FIIKGAEKTFIAQEQICLKRLWLSNKPSWTVAYRSEFKRRRVYLKLVAPEVENIRG-EKV 613
            F+IKGAEKTFIAQEQICLKRLW+S+ P+W VAYR  +KR+RVY+KL  P+ EN RG EKV
Sbjct: 259  FLIKGAEKTFIAQEQICLKRLWVSSNPTWMVAYRPIWKRKRVYVKLEPPKDENNRGGEKV 318

Query: 612  LTAYFLATQIPVWILFFALGVSSDKEVVDLIDYTTDDASIINILFASIYDADKNCAD--- 442
            LT YF +T+IP+WILFFALG SSDKEVVDLID+  DDA I NIL ASI++AD+       
Sbjct: 319  LTVYFSSTEIPIWILFFALGASSDKEVVDLIDFNIDDAGISNILVASIHEADREAEKKGM 378

Query: 441  -FRRRGKALSRVHDLMKKCRFPPEEPIEDCISKYLFASLTSLKQKAHFLGYMVKCLLQAY 265
             FRR+G A+S V  L+K C+FPP E I++CISKYLF + + +KQKA FLGYMVKCLLQAY
Sbjct: 379  YFRRQGNAISFVDKLVKSCKFPPGESIQECISKYLFPNFSGVKQKARFLGYMVKCLLQAY 438

Query: 264  TGQRKCDSRDDFRNKXXXXXXXXXXXXXRVHIKHAERRMVKAMQRDLYGDRSLRPIEHYL 85
            TG+RKCD+RDDFRNK             RVHI+HAERRMVKAMQR+LYGDR LRPIE+YL
Sbjct: 439  TGRRKCDNRDDFRNKRLELAGELLERELRVHIRHAERRMVKAMQRELYGDRDLRPIENYL 498

Query: 84   DASIITNGLSRAFSTGAWSHPFKKMERI 1
            DASIITNGLSRAFSTG WSHPFK+MERI
Sbjct: 499  DASIITNGLSRAFSTGQWSHPFKRMERI 526


>ref|XP_002283296.1| PREDICTED: DNA-directed RNA polymerase D subunit 2a-like [Vitis
            vinifera]
          Length = 1198

 Score =  652 bits (1682), Expect = 0.0
 Identities = 326/493 (66%), Positives = 388/493 (78%), Gaps = 8/493 (1%)
 Frame = -1

Query: 1455 DTGTSSKNGN-LSNGVXXXXXXXXXXXXXXXDGFEMDMTEVRDLGEVFLNNFCKKASMAF 1279
            D G SS  G  LSNGV                   M   E+ DL + +L  FCKK +++F
Sbjct: 9    DLGMSSSMGEKLSNGVQMEIDDDL-----------MGSIEIDDLNKEYLKTFCKKVAVSF 57

Query: 1278 FNEYGLISHQINSYNEFTKTGIQNLFDSIGEIVVEPGYDPSRKGENGWRYASLKFGKVTL 1099
            FNEYGLI HQINS+N+F K GIQ +FDS GEI VEPGYDPS++GE  WRYAS++FGKVTL
Sbjct: 58   FNEYGLIQHQINSFNDFIKNGIQRVFDSFGEIPVEPGYDPSKRGEGDWRYASVRFGKVTL 117

Query: 1098 EPPKLWSGDQ-GDEFLNFLPRHARLQNMTYSSRMKVQIHFQVYTQALVRSDKFKTGQE-Q 925
            E P++W+G+  G E LNFLPRHARLQNMTYSSRMK Q+HFQVYTQ LVRSDK+KTG++ +
Sbjct: 118  ERPRVWAGESDGKESLNFLPRHARLQNMTYSSRMKAQVHFQVYTQKLVRSDKYKTGKDNK 177

Query: 924  YLQKDVLSEESRDILIGRIPVMVKSDLCWMHKAEKGDCDFDHGGYFIIKGAEKTFIAQEQ 745
            Y++K V+ E++RDILIGRIPVMVKS+LCWM+  E+GDC++DHGGYF+IKGAEKTFIAQEQ
Sbjct: 178  YVEKKVIFEDNRDILIGRIPVMVKSELCWMNGVERGDCEYDHGGYFLIKGAEKTFIAQEQ 237

Query: 744  ICLKRLWLSNKPSWTVAYRSEFKRRRVYLKLVAPEVENIRG-EKVLTAYFLATQIPVWIL 568
            ICLKRLW+S+ P+W VAYR  +KR+RVY+KL  P+ EN RG EKVLT YF +T+IP+WIL
Sbjct: 238  ICLKRLWVSSNPTWMVAYRPIWKRKRVYVKLEPPKDENNRGGEKVLTVYFSSTEIPIWIL 297

Query: 567  FFALGVSSDKEVVDLIDYTTDDASIINILFASIYDADKNCAD----FRRRGKALSRVHDL 400
            FFALG SSDKEVVDLID+  DDA I NIL ASI++AD+        FRR+G A+S V  L
Sbjct: 298  FFALGASSDKEVVDLIDFNIDDAGISNILVASIHEADREAEKKGMYFRRQGNAISFVDKL 357

Query: 399  MKKCRFPPEEPIEDCISKYLFASLTSLKQKAHFLGYMVKCLLQAYTGQRKCDSRDDFRNK 220
            +K C+FPP E I++CISKYLF + + +KQKA FLGYMVKCLLQAYTG+RKCD+RDDFRNK
Sbjct: 358  VKSCKFPPGESIQECISKYLFPNFSGVKQKARFLGYMVKCLLQAYTGRRKCDNRDDFRNK 417

Query: 219  XXXXXXXXXXXXXRVHIKHAERRMVKAMQRDLYGDRSLRPIEHYLDASIITNGLSRAFST 40
                         RVHI+HAERRMVKAMQR+LYGDR LRPIE+YLDASIITNGLSRAFST
Sbjct: 418  RLELAGELLERELRVHIRHAERRMVKAMQRELYGDRDLRPIENYLDASIITNGLSRAFST 477

Query: 39   GAWSHPFKKMERI 1
            G WSHPFK+MERI
Sbjct: 478  GQWSHPFKRMERI 490


>ref|XP_006442883.1| hypothetical protein CICLE_v10018562mg [Citrus clementina]
            gi|568850178|ref|XP_006478802.1| PREDICTED: DNA-directed
            RNA polymerases IV and V subunit 2-like [Citrus sinensis]
            gi|557545145|gb|ESR56123.1| hypothetical protein
            CICLE_v10018562mg [Citrus clementina]
          Length = 1198

 Score =  639 bits (1647), Expect = e-180
 Identities = 308/453 (67%), Positives = 370/453 (81%), Gaps = 2/453 (0%)
 Frame = -1

Query: 1353 MDMTEVRDLGEVFLNNFCKKASMAFFNEYGLISHQINSYNEFTKTGIQNLFDSIGEIVVE 1174
            +D T +RDLGE FL  FC+KA+++FFNEYGL+SHQINSYNEF K G+Q  FDS GE +VE
Sbjct: 34   IDPTSLRDLGEEFLKTFCRKAAVSFFNEYGLVSHQINSYNEFIKNGLQKAFDSFGETIVE 93

Query: 1173 PGYDPSRKGENGWRYASLKFGKVTLEPPKLWSGDQGDEFLNFLPRHARLQNMTYSSRMKV 994
            PGYDPS+KGE  WRYAS++FG+VTL+ P  ++G+ GDE  +  PRHARLQNMTYSSRMKV
Sbjct: 94   PGYDPSKKGEGEWRYASMRFGQVTLDKPSFFAGNGGDEH-DMFPRHARLQNMTYSSRMKV 152

Query: 993  QIHFQVYTQALVRSDKFKTGQEQYLQKDVLSEESRDILIGRIPVMVKSDLCWMHKAEKGD 814
            ++ FQVYTQ  V SDKFKTG+EQY+QK+VLS+E+ DI+IGRIPVMVKSDLCWM   EKGD
Sbjct: 153  KVQFQVYTQKRVTSDKFKTGREQYIQKEVLSDEATDIIIGRIPVMVKSDLCWMKGVEKGD 212

Query: 813  CDFDHGGYFIIKGAEKTFIAQEQICLKRLWLSNKPSWTVAYRSEFKRRRVYLKLV-APEV 637
            CDFDHGGYFIIKGAEK F+AQEQICLKRLW+SN   WTVAY+SE KR R+ ++LV   + 
Sbjct: 213  CDFDHGGYFIIKGAEKVFVAQEQICLKRLWVSNSMGWTVAYKSENKRNRLIVRLVDMSKF 272

Query: 636  ENIRG-EKVLTAYFLATQIPVWILFFALGVSSDKEVVDLIDYTTDDASIINILFASIYDA 460
            E+I+G EKVL+ YFL+T+IP+WILFFALGVSSDKE+V+LID+T +D SI+NILFASI+DA
Sbjct: 273  EDIKGGEKVLSVYFLSTEIPIWILFFALGVSSDKEIVNLIDFTCEDCSILNILFASIHDA 332

Query: 459  DKNCADFRRRGKALSRVHDLMKKCRFPPEEPIEDCISKYLFASLTSLKQKAHFLGYMVKC 280
            D  C +FR+   AL  V  L+K   FPP E  E+C++ YLF SL   KQKA FLGYMVKC
Sbjct: 333  DNKCDEFRKGRNALKYVDKLIKGTTFPPGESTEECMNTYLFPSLHGTKQKARFLGYMVKC 392

Query: 279  LLQAYTGQRKCDSRDDFRNKXXXXXXXXXXXXXRVHIKHAERRMVKAMQRDLYGDRSLRP 100
            LLQAY+G+RKCD+RDDFRNK             +VHI HA +RM KA+QRDLYGDR++RP
Sbjct: 393  LLQAYSGRRKCDNRDDFRNKRLELAGELLERELKVHIAHARKRMAKALQRDLYGDRTVRP 452

Query: 99   IEHYLDASIITNGLSRAFSTGAWSHPFKKMERI 1
            IE+YLDASI+TNGLSRAFSTGAWSHPFK+ ERI
Sbjct: 453  IEYYLDASILTNGLSRAFSTGAWSHPFKRTERI 485


>ref|XP_006351506.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
            [Solanum tuberosum]
          Length = 1217

 Score =  614 bits (1583), Expect = e-173
 Identities = 294/457 (64%), Positives = 366/457 (80%), Gaps = 7/457 (1%)
 Frame = -1

Query: 1350 DMTEVRDLGEVFLNNFCKKASMAFFNEYGLISHQINSYNEFTKTGIQNLFDSIGEIVVEP 1171
            DM  +++LGE +L NFCKKAS  FF +YGLISHQINSYN+F   GIQ +FDS+GEI VEP
Sbjct: 54   DMVLIKELGETYLKNFCKKASTGFFEKYGLISHQINSYNDFINYGIQRVFDSVGEIHVEP 113

Query: 1170 GYDPSRKGENGWRYASLKFGKVTLEPPKLWSG-----DQGDEFLNFLPRHARLQNMTYSS 1006
            GYDPS++G+  W++AS+KFGKVTLE PK W+G     D G E+L+ LPRHARLQNMTYS+
Sbjct: 114  GYDPSKRGDGDWKHASVKFGKVTLERPKFWAGEKFSADGGKEYLDLLPRHARLQNMTYSA 173

Query: 1005 RMKVQIHFQVYTQALVRSDKFKTGQEQYLQKDVLSEESRDILIGRIPVMVKSDLCWMHKA 826
            R+ V+ H QVYT+ LVRSDKFKTG +Q++ K+   E+ RD+LIGRIPVMV S+LCWM+  
Sbjct: 174  RIMVETHVQVYTKKLVRSDKFKTGVDQFVDKECEVEDKRDVLIGRIPVMVNSELCWMNGV 233

Query: 825  EKGDCDFDHGGYFIIKGAEKTFIAQEQICLKRLWLSNKPSWTVAYRSEFKRRRVYLKLVA 646
            +K DC+FDHGGYFI+KGAEKTFIAQEQ+CLKRLW+SN P+W V YR   KR+RVY+KL  
Sbjct: 234  DKLDCEFDHGGYFIVKGAEKTFIAQEQLCLKRLWVSNNPTWMVGYRPGEKRKRVYIKLTE 293

Query: 645  P-EVENIRG-EKVLTAYFLATQIPVWILFFALGVSSDKEVVDLIDYTTDDASIINILFAS 472
              ++E+I+G EK L+ Y LA ++P+W+LFFALGVSSD+EVV+LID   +D +I+NIL AS
Sbjct: 294  TLKLEHIKGGEKALSVYILA-EMPIWVLFFALGVSSDREVVNLIDVDIEDTTIVNILVAS 352

Query: 471  IYDADKNCADFRRRGKALSRVHDLMKKCRFPPEEPIEDCISKYLFASLTSLKQKAHFLGY 292
            I++ADKNC DFR+  KAL+ V  L+K C+FPP+E +E+CI+ YLF +L+  KQKA FLGY
Sbjct: 353  IHEADKNCEDFRKGKKALAYVDRLIKNCKFPPQESVEECINAYLFPNLSGFKQKARFLGY 412

Query: 291  MVKCLLQAYTGQRKCDSRDDFRNKXXXXXXXXXXXXXRVHIKHAERRMVKAMQRDLYGDR 112
            MVKCLL ++ G+RK D+RDDFRNK             R HIKHAERRMVKAMQRDLYGDR
Sbjct: 413  MVKCLLHSFIGRRKVDNRDDFRNKRLELAGELLERELRAHIKHAERRMVKAMQRDLYGDR 472

Query: 111  SLRPIEHYLDASIITNGLSRAFSTGAWSHPFKKMERI 1
             ++PIEHYLDASIITNGLSRAFSTG W HP+K+MER+
Sbjct: 473  QVQPIEHYLDASIITNGLSRAFSTGHWCHPYKRMERV 509


>ref|XP_006364477.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
            [Solanum tuberosum]
          Length = 1219

 Score =  613 bits (1580), Expect = e-173
 Identities = 304/508 (59%), Positives = 380/508 (74%), Gaps = 15/508 (2%)
 Frame = -1

Query: 1479 LILMGISKDTGTSSKNGNLSNGVXXXXXXXXXXXXXXXDGFE--------MDMTEVRDLG 1324
            + +  I +D G SS     SNG                  ++        +DMT +++LG
Sbjct: 1    MTISDIMEDVGCSSGKAKTSNGSTMMDFDIDGLFEVEDYDWDEDEDEDDNLDMTSIKELG 60

Query: 1323 EVFLNNFCKKASMAFFNEYGLISHQINSYNEFTKTGIQNLFDSIGEIVVEPGYDPSRKGE 1144
              FL NFCKKAS  FF +YG+ISHQI+SYN+F + GIQ +FDS+GEI VEPGYDPS+KGE
Sbjct: 61   GGFLRNFCKKASAGFFEKYGVISHQIDSYNDFIRYGIQRVFDSVGEIHVEPGYDPSKKGE 120

Query: 1143 NGWRYASLKFGKVTLEPPKLWSGDQ-----GDEFLNFLPRHARLQNMTYSSRMKVQIHFQ 979
              W++AS+KFGKVTL+ PK W+G++     G+E+L+  PRHARLQNMTYS+R+ V+ H Q
Sbjct: 121  GEWKHASVKFGKVTLDRPKFWAGEKFSAYNGEEYLDLWPRHARLQNMTYSARIIVETHVQ 180

Query: 978  VYTQALVRSDKFKTGQEQYLQKDVLSEESRDILIGRIPVMVKSDLCWMHKAEKGDCDFDH 799
            V+T+ LVRSDKFKTG EQ++ K+ + E+ RD+ IGRIPVMV S+LCWM  A++ DCDFDH
Sbjct: 181  VFTKKLVRSDKFKTGVEQFVDKECVMEDKRDVFIGRIPVMVNSELCWMSGADRPDCDFDH 240

Query: 798  GGYFIIKGAEKTFIAQEQICLKRLWLSNKPSWTVAYRSEFKRRRVYLKLVAP-EVENIRG 622
            GGYFI+KGAEK FIAQEQICLKRLW+SN  +W VAYRS  KR RVYLKL    + E+I+G
Sbjct: 241  GGYFIVKGAEKIFIAQEQICLKRLWVSNHSTWMVAYRSGEKRNRVYLKLTETLKHEHIKG 300

Query: 621  E-KVLTAYFLATQIPVWILFFALGVSSDKEVVDLIDYTTDDASIINILFASIYDADKNCA 445
            E K L+ YFLA ++P+W+LFFALGVSSD+E+VDLID    D +IINIL ASI+DADKNC 
Sbjct: 301  EAKALSVYFLA-EMPIWVLFFALGVSSDREIVDLIDVDIKDTNIINILVASIHDADKNCE 359

Query: 444  DFRRRGKALSRVHDLMKKCRFPPEEPIEDCISKYLFASLTSLKQKAHFLGYMVKCLLQAY 265
            DFR+  KAL+ V  L+K C+FPP+E +E+CI +YLF +L+ LKQKA FLGYMVKCLL +Y
Sbjct: 360  DFRKGKKALAYVDRLIKSCKFPPQESVEECIKEYLFPNLSGLKQKARFLGYMVKCLLLSY 419

Query: 264  TGQRKCDSRDDFRNKXXXXXXXXXXXXXRVHIKHAERRMVKAMQRDLYGDRSLRPIEHYL 85
             G+RK D+RDDFRNK             R HIKHAERRMVKA+QRDL GDR ++P+EHYL
Sbjct: 420  IGRRKVDNRDDFRNKRLDLAGELLERELRAHIKHAERRMVKALQRDLCGDRQVQPLEHYL 479

Query: 84   DASIITNGLSRAFSTGAWSHPFKKMERI 1
            DASIITNGLSRAFSTG W HP+K+MER+
Sbjct: 480  DASIITNGLSRAFSTGHWCHPYKRMERV 507


>gb|EXB86677.1| DNA-directed RNA polymerase D subunit 2a [Morus notabilis]
          Length = 1196

 Score =  612 bits (1579), Expect = e-172
 Identities = 294/451 (65%), Positives = 358/451 (79%), Gaps = 1/451 (0%)
 Frame = -1

Query: 1350 DMTEVRDLGEVFLNNFCKKASMAFFNEYGLISHQINSYNEFTKTGIQNLFDSIGEIVVEP 1171
            ++T +++LGEVFL NFCK+AS +FF+EYGLISHQINSYN+F + G+Q +FDS G+++VEP
Sbjct: 36   ELTSIKELGEVFLQNFCKEASTSFFSEYGLISHQINSYNDFIRNGVQKVFDSFGDLIVEP 95

Query: 1170 GYDPSRKGENGWRYASLKFGKVTLEPPKLWSGDQGDEFLNFLPRHARLQNMTYSSRMKVQ 991
            GYDPS+K +N WRYA ++FGKVTL+ P  W G   D+  N LPRHARLQNMTYSSRMKV 
Sbjct: 96   GYDPSKKRQNEWRYALVRFGKVTLDLPSFWGGADKDKEYNLLPRHARLQNMTYSSRMKVN 155

Query: 990  IHFQVYTQALVRSDKFKTGQEQYLQKDVLSEESRDILIGRIPVMVKSDLCWMHKAEKGDC 811
            +H +VYTQ LVRSDKFKTG+EQ+L K+++S E +D++IGRIPVMVKSDLCWM  AEKGDC
Sbjct: 156  VHIEVYTQKLVRSDKFKTGKEQFLDKEIISTEDKDVMIGRIPVMVKSDLCWMKDAEKGDC 215

Query: 810  DFDHGGYFIIKGAEKTFIAQEQICLKRLWLSNKPSWTVAYRSEFKRRRVYLKLVAPEVEN 631
             FDHGGYFIIKGAEKTFIAQEQIC KRLW+++  + TVAY+SE KR R+ L+L    +E+
Sbjct: 216  YFDHGGYFIIKGAEKTFIAQEQICRKRLWITSHQNLTVAYQSEVKRNRLILRLAQSGLED 275

Query: 630  IRGEK-VLTAYFLATQIPVWILFFALGVSSDKEVVDLIDYTTDDASIINILFASIYDADK 454
               EK VL  YFL+T+IPVWILFFALGVSSDKEVVDLID+ TDDASI+NILF SI  +D+
Sbjct: 276  TTVEKDVLCVYFLSTEIPVWILFFALGVSSDKEVVDLIDFPTDDASILNILFPSIQISDE 335

Query: 453  NCADFRRRGKALSRVHDLMKKCRFPPEEPIEDCISKYLFASLTSLKQKAHFLGYMVKCLL 274
             CA FRR+ KAL  V   +KK +FPP E  E+C+  +LF +L  + QKA FLGYMVKCLL
Sbjct: 336  VCAGFRRQKKALGFVEKHIKKTQFPPRESAEECLDMFLFPNLRGMLQKARFLGYMVKCLL 395

Query: 273  QAYTGQRKCDSRDDFRNKXXXXXXXXXXXXXRVHIKHAERRMVKAMQRDLYGDRSLRPIE 94
            QA+TG+RKC+++DDFRNK             R  + HA +R  KA+QRDLYGD+ LR IE
Sbjct: 396  QAFTGRRKCNNKDDFRNKRLDLAGELLERELRAQVSHARKRTAKALQRDLYGDKGLRQIE 455

Query: 93   HYLDASIITNGLSRAFSTGAWSHPFKKMERI 1
             YLDASI+TNGLSRAFSTGAW HPFKK ERI
Sbjct: 456  FYLDASIVTNGLSRAFSTGAWCHPFKKTERI 486


>ref|XP_004236361.1| PREDICTED: DNA-directed RNA polymerase D subunit 2a [Solanum
            lycopersicum]
          Length = 1217

 Score =  612 bits (1578), Expect = e-172
 Identities = 294/457 (64%), Positives = 366/457 (80%), Gaps = 7/457 (1%)
 Frame = -1

Query: 1350 DMTEVRDLGEVFLNNFCKKASMAFFNEYGLISHQINSYNEFTKTGIQNLFDSIGEIVVEP 1171
            DM  +++LGE FL NFCKKAS  FF +YGLISHQINSYN+F   GIQ +FDS+GEI VEP
Sbjct: 54   DMVLIKELGESFLKNFCKKASTGFFEKYGLISHQINSYNDFINYGIQRVFDSVGEIHVEP 113

Query: 1170 GYDPSRKGENGWRYASLKFGKVTLEPPKLWSG-----DQGDEFLNFLPRHARLQNMTYSS 1006
            GYDPS++G+  W++AS+KFGKVTLE PK W+G     D G E+L+ LPRHARLQNMTYS+
Sbjct: 114  GYDPSKRGDGDWKHASVKFGKVTLERPKFWAGEKFSVDGGKEYLDLLPRHARLQNMTYSA 173

Query: 1005 RMKVQIHFQVYTQALVRSDKFKTGQEQYLQKDVLSEESRDILIGRIPVMVKSDLCWMHKA 826
            R+ V+ H QVYT+ LVRSDKFKTG ++++ K+   E+ RD+LIGRIPVMV S+LCWM+  
Sbjct: 174  RIMVETHVQVYTKKLVRSDKFKTGVDRFVDKEWEVEDKRDVLIGRIPVMVNSELCWMNGV 233

Query: 825  EKGDCDFDHGGYFIIKGAEKTFIAQEQICLKRLWLSNKPSWTVAYRSEFKRRRVYLKLVA 646
            +K DC+FDHGGYFI+KGAEKTFIAQEQ+CLKRLW+SN P+W V YR   KR+RVY+KL  
Sbjct: 234  DKLDCEFDHGGYFIVKGAEKTFIAQEQLCLKRLWVSNNPTWMVGYRPGEKRKRVYIKLTE 293

Query: 645  P-EVENIRG-EKVLTAYFLATQIPVWILFFALGVSSDKEVVDLIDYTTDDASIINILFAS 472
              ++E+I+G EK L+ Y LA ++P+W+LFFALGVSSD+EVV+LID   +D +I+NIL AS
Sbjct: 294  TLKLEHIKGGEKALSVYILA-EMPIWVLFFALGVSSDREVVNLIDVDIEDTTIVNILVAS 352

Query: 471  IYDADKNCADFRRRGKALSRVHDLMKKCRFPPEEPIEDCISKYLFASLTSLKQKAHFLGY 292
            I++ADKNC DFR+  KAL+ V  L+K C+FPP+E +E+CI+ YLF +L+  KQKA FLGY
Sbjct: 353  IHEADKNCEDFRKGKKALAYVDRLIKNCKFPPQESVEECINAYLFPNLSGFKQKARFLGY 412

Query: 291  MVKCLLQAYTGQRKCDSRDDFRNKXXXXXXXXXXXXXRVHIKHAERRMVKAMQRDLYGDR 112
            MVKCLL ++ G+RK D+RDDFRNK             R HIKHAERRMVKAMQRDLYGDR
Sbjct: 413  MVKCLLHSFIGRRKVDNRDDFRNKRLELAGELLERELRAHIKHAERRMVKAMQRDLYGDR 472

Query: 111  SLRPIEHYLDASIITNGLSRAFSTGAWSHPFKKMERI 1
             ++PIEHYLDASIITNGLSRAFSTG W HP+K+MER+
Sbjct: 473  QVQPIEHYLDASIITNGLSRAFSTGHWCHPYKRMERV 509


>ref|XP_007225442.1| hypothetical protein PRUPE_ppa000410mg [Prunus persica]
            gi|462422378|gb|EMJ26641.1| hypothetical protein
            PRUPE_ppa000410mg [Prunus persica]
          Length = 1200

 Score =  610 bits (1572), Expect = e-172
 Identities = 303/454 (66%), Positives = 357/454 (78%), Gaps = 6/454 (1%)
 Frame = -1

Query: 1344 TEVRDLGEVFLNNFCKKASMAFFNEYGLISHQINSYNEFTKTGIQNLFDSIGEIVVEPGY 1165
            T + DLGE FL  FCK+A++AFFNEYGLISHQINSYN+F K GIQ +FDS GEI+VEPGY
Sbjct: 41   TSIHDLGEGFLKFFCKEAAIAFFNEYGLISHQINSYNDFIKNGIQRVFDSFGEIIVEPGY 100

Query: 1164 DPSRKGENGWRYASLKFGKVTLEPPKLWSGDQGDEFLNFLPRHARLQNMTYSSRMKVQIH 985
            DPS+KGE+ WRYAS+KFGKVTL  P  W G   ++    LPRHARLQNM+Y+S+MKV I 
Sbjct: 101  DPSKKGESEWRYASVKFGKVTLGMPSFWGGSDDEKEYKMLPRHARLQNMSYASKMKVNIT 160

Query: 984  FQVYTQALVRSDKFKTGQEQYLQKDVLSEESRDILIGRIPVMVKSDLCWMHKAEKGDCDF 805
             +VYTQ LV SDKFKTG+ QYL K +LS ++RDI+IG +PVMVKSDLCWM   EKGDCDF
Sbjct: 161  VEVYTQKLVSSDKFKTGKSQYLDKQILSTDTRDIIIGSVPVMVKSDLCWMKDFEKGDCDF 220

Query: 804  DHGGYFIIKGAEKTFIAQEQICLKRLWLSNKPSWTVAYRSEFKRRRVYLKLVA-PEVENI 628
            DHGGYFIIKGAEKTFIAQEQ CLKRL ++N    TVAYRSE KR R+ ++LV   ++ENI
Sbjct: 221  DHGGYFIIKGAEKTFIAQEQSCLKRLLITNNQGLTVAYRSEVKRHRLIIRLVGISKLENI 280

Query: 627  RG-EKVLTAYFLATQIPVWILFFALGVSSDKEVVDLIDYTTDDASIINILFASIYDA--- 460
             G EKVLT YF++T+IPVWI FFALGVSSD+EV++LIDY ++DASI NILFASI DA   
Sbjct: 281  EGVEKVLTVYFMSTEIPVWIWFFALGVSSDREVMNLIDYDSEDASISNILFASIRDADKL 340

Query: 459  -DKNCADFRRRGKALSRVHDLMKKCRFPPEEPIEDCISKYLFASLTSLKQKAHFLGYMVK 283
             DK    FRR   AL  V ++++K  FPP E +E+CIS YLF +L  LKQKA FLGYMVK
Sbjct: 341  NDKVDGGFRRGKNALKYVDEVIRKTAFPPGESMEECISLYLFPNLKGLKQKARFLGYMVK 400

Query: 282  CLLQAYTGQRKCDSRDDFRNKXXXXXXXXXXXXXRVHIKHAERRMVKAMQRDLYGDRSLR 103
             LLQAY G+RKCD+RDDFRNK             + HI HA RRM KA+QRDLYGDR++R
Sbjct: 401  SLLQAYAGRRKCDNRDDFRNKRLDLAGELLERELKAHIGHARRRMAKALQRDLYGDRAVR 460

Query: 102  PIEHYLDASIITNGLSRAFSTGAWSHPFKKMERI 1
            PIEHYLDASI+TNG+SRAFSTGAW HPFK+MER+
Sbjct: 461  PIEHYLDASIVTNGISRAFSTGAWCHPFKRMERM 494


>ref|XP_007011719.1| DNA-directed RNA polymerase isoform 3 [Theobroma cacao]
            gi|508782082|gb|EOY29338.1| DNA-directed RNA polymerase
            isoform 3 [Theobroma cacao]
          Length = 1073

 Score =  607 bits (1564), Expect = e-171
 Identities = 293/452 (64%), Positives = 360/452 (79%), Gaps = 2/452 (0%)
 Frame = -1

Query: 1350 DMTEVRDLGEVFLNNFCKKASMAFFNEYGLISHQINSYNEFTKTGIQNLFDSIGEIVVEP 1171
            ++  V+ LGE FL  FCK+A+++FF EYGLISHQ+NSYN F K G+QN FDS GE ++  
Sbjct: 25   EVLSVQQLGEEFLRGFCKQAAVSFFKEYGLISHQLNSYNAFIKYGLQNTFDSFGEFLIHS 84

Query: 1170 GYDPSRKGENGWRYASLKFGKVTLEPPKLWSGDQGDEFLNFLPRHARLQNMTYSSRMKVQ 991
            GYDPS+KGE  WR+A ++FGKVT+E P  W+   G+E LN LPRHARLQNMTYSSRMKV 
Sbjct: 85   GYDPSKKGEGDWRHARVRFGKVTVERPTFWAVSGGNE-LNMLPRHARLQNMTYSSRMKVN 143

Query: 990  IHFQVYTQALVRSDKFKTGQEQYLQKDVLSEESRDILIGRIPVMVKSDLCWMHKAEKGDC 811
            +  QVYT   V+SDKFKTG+E++++++V+ +++RDI+IGRIPVMV+SDLCWM++ EK DC
Sbjct: 144  VDLQVYTAKSVKSDKFKTGREEFVEEEVVYQDNRDIIIGRIPVMVRSDLCWMNEVEKADC 203

Query: 810  DFDHGGYFIIKGAEKTFIAQEQICLKRLWLSNKPSWTVAYRSEFKRRRVYLKLVA-PEVE 634
            DFDHGGYF+IKG EK FIAQEQI +KRLW+SN   WT+AYRSE KR R+ ++LV   +VE
Sbjct: 204  DFDHGGYFLIKGTEKIFIAQEQISMKRLWISNSQGWTIAYRSEVKRNRLIIRLVENSKVE 263

Query: 633  NIRG-EKVLTAYFLATQIPVWILFFALGVSSDKEVVDLIDYTTDDASIINILFASIYDAD 457
             I+G EKVLT YFL+T+IPVW+LFFALGVSSDKEVV+LIDY ++D+SI NILFASI +AD
Sbjct: 264  YIKGGEKVLTVYFLSTEIPVWVLFFALGVSSDKEVVNLIDYESNDSSITNILFASIRNAD 323

Query: 456  KNCADFRRRGKALSRVHDLMKKCRFPPEEPIEDCISKYLFASLTSLKQKAHFLGYMVKCL 277
              C  F +   A+  V  L+K  RFPPEE IE+C+S YLF +L S KQKA FLGYMVKCL
Sbjct: 324  GKCYKFCQGRNAIDYVGKLVKDTRFPPEEGIEECLSTYLFPTLRSFKQKARFLGYMVKCL 383

Query: 276  LQAYTGQRKCDSRDDFRNKXXXXXXXXXXXXXRVHIKHAERRMVKAMQRDLYGDRSLRPI 97
            LQAYTG+ KCD+RDDFRNK             +VHI HA RRM K +QRDLY DR++RPI
Sbjct: 384  LQAYTGRLKCDNRDDFRNKRLELAGELLERELKVHIAHARRRMAKTLQRDLYADRTVRPI 443

Query: 96   EHYLDASIITNGLSRAFSTGAWSHPFKKMERI 1
            EHYLDASI+TNGLSRAFSTGAWSHP+K+MERI
Sbjct: 444  EHYLDASIVTNGLSRAFSTGAWSHPYKRMERI 475


>ref|XP_007011717.1| DNA-directed RNA polymerase isoform 1 [Theobroma cacao]
            gi|508782080|gb|EOY29336.1| DNA-directed RNA polymerase
            isoform 1 [Theobroma cacao]
          Length = 1184

 Score =  607 bits (1564), Expect = e-171
 Identities = 293/452 (64%), Positives = 360/452 (79%), Gaps = 2/452 (0%)
 Frame = -1

Query: 1350 DMTEVRDLGEVFLNNFCKKASMAFFNEYGLISHQINSYNEFTKTGIQNLFDSIGEIVVEP 1171
            ++  V+ LGE FL  FCK+A+++FF EYGLISHQ+NSYN F K G+QN FDS GE ++  
Sbjct: 25   EVLSVQQLGEEFLRGFCKQAAVSFFKEYGLISHQLNSYNAFIKYGLQNTFDSFGEFLIHS 84

Query: 1170 GYDPSRKGENGWRYASLKFGKVTLEPPKLWSGDQGDEFLNFLPRHARLQNMTYSSRMKVQ 991
            GYDPS+KGE  WR+A ++FGKVT+E P  W+   G+E LN LPRHARLQNMTYSSRMKV 
Sbjct: 85   GYDPSKKGEGDWRHARVRFGKVTVERPTFWAVSGGNE-LNMLPRHARLQNMTYSSRMKVN 143

Query: 990  IHFQVYTQALVRSDKFKTGQEQYLQKDVLSEESRDILIGRIPVMVKSDLCWMHKAEKGDC 811
            +  QVYT   V+SDKFKTG+E++++++V+ +++RDI+IGRIPVMV+SDLCWM++ EK DC
Sbjct: 144  VDLQVYTAKSVKSDKFKTGREEFVEEEVVYQDNRDIIIGRIPVMVRSDLCWMNEVEKADC 203

Query: 810  DFDHGGYFIIKGAEKTFIAQEQICLKRLWLSNKPSWTVAYRSEFKRRRVYLKLVA-PEVE 634
            DFDHGGYF+IKG EK FIAQEQI +KRLW+SN   WT+AYRSE KR R+ ++LV   +VE
Sbjct: 204  DFDHGGYFLIKGTEKIFIAQEQISMKRLWISNSQGWTIAYRSEVKRNRLIIRLVENSKVE 263

Query: 633  NIRG-EKVLTAYFLATQIPVWILFFALGVSSDKEVVDLIDYTTDDASIINILFASIYDAD 457
             I+G EKVLT YFL+T+IPVW+LFFALGVSSDKEVV+LIDY ++D+SI NILFASI +AD
Sbjct: 264  YIKGGEKVLTVYFLSTEIPVWVLFFALGVSSDKEVVNLIDYESNDSSITNILFASIRNAD 323

Query: 456  KNCADFRRRGKALSRVHDLMKKCRFPPEEPIEDCISKYLFASLTSLKQKAHFLGYMVKCL 277
              C  F +   A+  V  L+K  RFPPEE IE+C+S YLF +L S KQKA FLGYMVKCL
Sbjct: 324  GKCYKFCQGRNAIDYVGKLVKDTRFPPEEGIEECLSTYLFPTLRSFKQKARFLGYMVKCL 383

Query: 276  LQAYTGQRKCDSRDDFRNKXXXXXXXXXXXXXRVHIKHAERRMVKAMQRDLYGDRSLRPI 97
            LQAYTG+ KCD+RDDFRNK             +VHI HA RRM K +QRDLY DR++RPI
Sbjct: 384  LQAYTGRLKCDNRDDFRNKRLELAGELLERELKVHIAHARRRMAKTLQRDLYADRTVRPI 443

Query: 96   EHYLDASIITNGLSRAFSTGAWSHPFKKMERI 1
            EHYLDASI+TNGLSRAFSTGAWSHP+K+MERI
Sbjct: 444  EHYLDASIVTNGLSRAFSTGAWSHPYKRMERI 475


>ref|XP_004245914.1| PREDICTED: DNA-directed RNA polymerase D subunit 2a-like [Solanum
            lycopersicum]
          Length = 1219

 Score =  607 bits (1564), Expect = e-171
 Identities = 304/508 (59%), Positives = 376/508 (74%), Gaps = 15/508 (2%)
 Frame = -1

Query: 1479 LILMGISKDTGTSSKNGNLSNGVXXXXXXXXXXXXXXXDGFE--------MDMTEVRDLG 1324
            + +  I +D G SS  G  SNG                  ++        +DM  +++LG
Sbjct: 1    MTISDIMEDVGCSSGKGKTSNGSTMMDFDIDGLFEVGDYDWDDDEDEDDNLDMASIKELG 60

Query: 1323 EVFLNNFCKKASMAFFNEYGLISHQINSYNEFTKTGIQNLFDSIGEIVVEPGYDPSRKGE 1144
              FL NFCKKAS  FF +YGLISHQI+SYN+F + GIQ +FDS+GEI VEPGYDPS+KGE
Sbjct: 61   GGFLRNFCKKASAGFFEKYGLISHQIDSYNDFIRYGIQKVFDSVGEIHVEPGYDPSKKGE 120

Query: 1143 NGWRYASLKFGKVTLEPPKLWSGDQ-----GDEFLNFLPRHARLQNMTYSSRMKVQIHFQ 979
              W++AS+KFG V L+ PK W+G++     G+E+LN  PRHARLQNMTYS+R+ V+ H Q
Sbjct: 121  GEWKHASVKFGNVILDRPKFWAGEKYSAYNGEEYLNMWPRHARLQNMTYSARIIVETHVQ 180

Query: 978  VYTQALVRSDKFKTGQEQYLQKDVLSEESRDILIGRIPVMVKSDLCWMHKAEKGDCDFDH 799
            V+T+ LVRSDKFKTG EQ++ K+ + E+ RD+ IGRIPVMV S+LCWM  A++ DC+FDH
Sbjct: 181  VFTKKLVRSDKFKTGVEQFVDKECVMEDKRDVFIGRIPVMVNSELCWMSGADRLDCEFDH 240

Query: 798  GGYFIIKGAEKTFIAQEQICLKRLWLSNKPSWTVAYRSEFKRRRVYLKLVAP-EVENIRG 622
            GGYFI+KGAEK FIAQEQ+CLKRLW+SN  +W VAYRS  KR RVYLKL    + E I+G
Sbjct: 241  GGYFIVKGAEKIFIAQEQMCLKRLWVSNHYTWMVAYRSGEKRNRVYLKLTETLKHEQIKG 300

Query: 621  E-KVLTAYFLATQIPVWILFFALGVSSDKEVVDLIDYTTDDASIINILFASIYDADKNCA 445
            E K L+ YFLA ++P+W+LFFALGVSSD+EVVDLID    D  IINIL ASI+DADKNC 
Sbjct: 301  EAKSLSVYFLA-EMPIWVLFFALGVSSDREVVDLIDVDIKDNKIINILVASIHDADKNCE 359

Query: 444  DFRRRGKALSRVHDLMKKCRFPPEEPIEDCISKYLFASLTSLKQKAHFLGYMVKCLLQAY 265
            DFR+  +AL+ V  L+K C+FPP+E +E+CI +YLF +L+ LKQKA FLGYMVKCLL +Y
Sbjct: 360  DFRKGKRALAYVDRLIKSCKFPPQESVEECIKEYLFPNLSGLKQKARFLGYMVKCLLLSY 419

Query: 264  TGQRKCDSRDDFRNKXXXXXXXXXXXXXRVHIKHAERRMVKAMQRDLYGDRSLRPIEHYL 85
             G+RK D+RDDFRNK             RVHIKHAERRMVKA+QRDL GDR + PIEHYL
Sbjct: 420  IGRRKVDNRDDFRNKRLDLAGELLERELRVHIKHAERRMVKALQRDLCGDRQVHPIEHYL 479

Query: 84   DASIITNGLSRAFSTGAWSHPFKKMERI 1
            DASIITNGLSRAFSTG W HP+K+MER+
Sbjct: 480  DASIITNGLSRAFSTGHWCHPYKRMERV 507


>gb|AAY68206.1| RNA polymerase IV second largest subunit [Solanum lycopersicum]
          Length = 1123

 Score =  606 bits (1563), Expect = e-171
 Identities = 292/457 (63%), Positives = 364/457 (79%), Gaps = 7/457 (1%)
 Frame = -1

Query: 1350 DMTEVRDLGEVFLNNFCKKASMAFFNEYGLISHQINSYNEFTKTGIQNLFDSIGEIVVEP 1171
            DM  +++LGE FL NFCKKAS  FF +YG ISHQINSYN+F   GIQ +FDS+GEI VEP
Sbjct: 48   DMVLIKELGESFLKNFCKKASTGFFEKYGSISHQINSYNDFINYGIQRVFDSVGEIHVEP 107

Query: 1170 GYDPSRKGENGWRYASLKFGKVTLEPPKLWSGDQ-----GDEFLNFLPRHARLQNMTYSS 1006
            GYDPS++G+  W++AS+KFGKVTLE PK W+G++     G E+L+ LPRHARLQNMTYS+
Sbjct: 108  GYDPSKRGDGDWKHASVKFGKVTLERPKFWAGEKFSVGGGKEYLDLLPRHARLQNMTYSA 167

Query: 1005 RMKVQIHFQVYTQALVRSDKFKTGQEQYLQKDVLSEESRDILIGRIPVMVKSDLCWMHKA 826
            R+ V+ H QVYT+ LVRSDKFKTG ++++ K+   E  RD+LIGRIPVMV S+LCWM+  
Sbjct: 168  RIMVETHVQVYTKKLVRSDKFKTGVDRFVDKEWEVEGKRDVLIGRIPVMVNSELCWMNGV 227

Query: 825  EKGDCDFDHGGYFIIKGAEKTFIAQEQICLKRLWLSNKPSWTVAYRSEFKRRRVYLKLVA 646
            +K DC+FDHGGYFI KGAEKTFIAQEQ+CLKRLW+SN P+W V YR   KR+RVY+KL  
Sbjct: 228  DKLDCEFDHGGYFIAKGAEKTFIAQEQLCLKRLWVSNNPTWMVGYRPGEKRKRVYIKLTE 287

Query: 645  P-EVENIRG-EKVLTAYFLATQIPVWILFFALGVSSDKEVVDLIDYTTDDASIINILFAS 472
              ++E+I+G EK L+ Y LA ++P+W+LFFALGVSSD+EVV+LID   +D +I+NIL AS
Sbjct: 288  TLKLEHIKGGEKALSVYILA-EMPIWVLFFALGVSSDREVVNLIDVDIEDTTIVNILVAS 346

Query: 471  IYDADKNCADFRRRGKALSRVHDLMKKCRFPPEEPIEDCISKYLFASLTSLKQKAHFLGY 292
            I++ADKNC DFR+  KAL+ V  L+K C+FPP+E +E+CI+ YLF +L+  KQKA FLGY
Sbjct: 347  IHEADKNCEDFRKGKKALAYVDRLIKNCKFPPQESVEECINAYLFPNLSGFKQKARFLGY 406

Query: 291  MVKCLLQAYTGQRKCDSRDDFRNKXXXXXXXXXXXXXRVHIKHAERRMVKAMQRDLYGDR 112
            MVKCLL ++ G+RK D+RDDFRNK             R HIKHAERRMVKAMQRDLYGDR
Sbjct: 407  MVKCLLHSFIGRRKVDNRDDFRNKRLELAGELLERELRAHIKHAERRMVKAMQRDLYGDR 466

Query: 111  SLRPIEHYLDASIITNGLSRAFSTGAWSHPFKKMERI 1
             ++PIEHYLDASIITNGLSRAFSTG W HP+K+MER+
Sbjct: 467  QVQPIEHYLDASIITNGLSRAFSTGHWCHPYKRMERV 503


>ref|XP_004145500.1| PREDICTED: DNA-directed RNA polymerase D subunit 2a-like [Cucumis
            sativus]
          Length = 1197

 Score =  604 bits (1558), Expect = e-170
 Identities = 292/452 (64%), Positives = 355/452 (78%), Gaps = 6/452 (1%)
 Frame = -1

Query: 1338 VRDLGEVFLNNFCKKASMAFFNEYGLISHQINSYNEFTKTGIQNLFDSIGEIVVEPGYDP 1159
            + DLGE FL +FCKK+SMAFFN+YGLISHQINSYN+F K GIQ  FD  G+I+V+PGYDP
Sbjct: 40   IHDLGEAFLKDFCKKSSMAFFNQYGLISHQINSYNDFIKNGIQKAFDFFGDILVQPGYDP 99

Query: 1158 SRKGENGWRYASLKFGKVTLEPPKLWSGDQGDEFLNFLPRHARLQNMTYSSRMKVQIHFQ 979
            S+KG+  WRYA++KFGKVTL+ PK W G    +  N LPRHARLQNMTYSSRMK+ I  +
Sbjct: 100  SKKGDGEWRYATVKFGKVTLDKPKFWGGAASGKEYNMLPRHARLQNMTYSSRMKINISLE 159

Query: 978  VYTQALVRSDKFKTGQEQYLQKDVL--SEESRDILIGRIPVMVKSDLCWMHKAEKGDCDF 805
            +YTQ LV SDKFKTG++QY+ K+ +  + ++RD+ IGR+PVMV SDLCWM   +K DC+F
Sbjct: 160  IYTQKLVSSDKFKTGKDQYVDKEPVEGASDNRDVFIGRLPVMVNSDLCWMKDGQKRDCEF 219

Query: 804  DHGGYFIIKGAEKTFIAQEQICLKRLWLSNKPSWTVAYRSEFKRRRVYLKLVA-PEVENI 628
            D GGYF+IKGAEK FIAQEQICL+RLW+SN   WTVAYRSE KR R+ ++LV   + E++
Sbjct: 220  DRGGYFLIKGAEKIFIAQEQICLRRLWISNVQGWTVAYRSEVKRNRLIIRLVENSKSEDL 279

Query: 627  RG-EKVLTAYFLATQIPVWILFFALGVSSDKEVVDLIDYTTDDASIINILFASI--YDAD 457
            +  EKVL  YFL+T++PVWILFFALGVSSDKE+VDLIDY  DD +++NILFAS+   D D
Sbjct: 280  KSKEKVLNVYFLSTEVPVWILFFALGVSSDKEIVDLIDYGRDDPTVLNILFASVREVDND 339

Query: 456  KNCADFRRRGKALSRVHDLMKKCRFPPEEPIEDCISKYLFASLTSLKQKAHFLGYMVKCL 277
                DFRR  +AL+ + + ++K  FPP + IEDC++ YLFASL   KQK HFLGYMVKCL
Sbjct: 340  DKWKDFRRGKRALTFLDNEIRKTSFPPADKIEDCLNLYLFASLKGSKQKCHFLGYMVKCL 399

Query: 276  LQAYTGQRKCDSRDDFRNKXXXXXXXXXXXXXRVHIKHAERRMVKAMQRDLYGDRSLRPI 97
            LQAYTG+RKCD+RDDFRNK             +VHI HA RRM KA+QRDLYGDR + PI
Sbjct: 400  LQAYTGRRKCDNRDDFRNKRFELAAELLERELKVHIAHARRRMEKALQRDLYGDRQVHPI 459

Query: 96   EHYLDASIITNGLSRAFSTGAWSHPFKKMERI 1
            EHYLDASIITNGLSRAFSTGAW+H FK+MERI
Sbjct: 460  EHYLDASIITNGLSRAFSTGAWAHAFKRMERI 491


>ref|XP_004157128.1| PREDICTED: DNA-directed RNA polymerase D subunit 2a-like [Cucumis
            sativus]
          Length = 1031

 Score =  604 bits (1557), Expect = e-170
 Identities = 292/452 (64%), Positives = 355/452 (78%), Gaps = 6/452 (1%)
 Frame = -1

Query: 1338 VRDLGEVFLNNFCKKASMAFFNEYGLISHQINSYNEFTKTGIQNLFDSIGEIVVEPGYDP 1159
            + DLGE FL +FCKK+SMAFFN+YGLISHQINSYN+F K GIQ  FD  G+I+V+PGYDP
Sbjct: 40   IHDLGEAFLKDFCKKSSMAFFNQYGLISHQINSYNDFIKNGIQKAFDFFGDILVQPGYDP 99

Query: 1158 SRKGENGWRYASLKFGKVTLEPPKLWSGDQGDEFLNFLPRHARLQNMTYSSRMKVQIHFQ 979
            S+KG+  WRYA++KFGKVTL+ PK W G    +  N LPRHARLQNMTYSSRMK+ I  +
Sbjct: 100  SKKGDGEWRYATVKFGKVTLDKPKFWGGAASGKEYNMLPRHARLQNMTYSSRMKINISLE 159

Query: 978  VYTQALVRSDKFKTGQEQYLQKDVL--SEESRDILIGRIPVMVKSDLCWMHKAEKGDCDF 805
            +YTQ LV SDKFKTG++QY+ K+ +  + ++RD+ IGR+PVMV SDLCWM   +K DC+F
Sbjct: 160  IYTQKLVSSDKFKTGKDQYVDKEPVEGASDNRDVFIGRLPVMVNSDLCWMKDEQKRDCEF 219

Query: 804  DHGGYFIIKGAEKTFIAQEQICLKRLWLSNKPSWTVAYRSEFKRRRVYLKLVA-PEVENI 628
            D GGYF+IKGAEK FIAQEQICL+RLW+SN   WTVAYRSE KR R+ ++LV   + E++
Sbjct: 220  DRGGYFLIKGAEKIFIAQEQICLRRLWISNVQGWTVAYRSEVKRNRLIIRLVENSKSEDL 279

Query: 627  RG-EKVLTAYFLATQIPVWILFFALGVSSDKEVVDLIDYTTDDASIINILFASI--YDAD 457
            +  EKVL  YFL+T++PVWILFFALGVSSDKE+VDLIDY  DD +++NILFAS+   D D
Sbjct: 280  KSKEKVLNVYFLSTEVPVWILFFALGVSSDKEIVDLIDYGRDDPTVLNILFASVREVDND 339

Query: 456  KNCADFRRRGKALSRVHDLMKKCRFPPEEPIEDCISKYLFASLTSLKQKAHFLGYMVKCL 277
                DFRR  +AL+ + + ++K  FPP + IEDC++ YLFASL   KQK HFLGYMVKCL
Sbjct: 340  DKWKDFRRGKRALTFLDNEIRKTSFPPADKIEDCLNLYLFASLKGSKQKCHFLGYMVKCL 399

Query: 276  LQAYTGQRKCDSRDDFRNKXXXXXXXXXXXXXRVHIKHAERRMVKAMQRDLYGDRSLRPI 97
            LQAYTG+RKCD+RDDFRNK             +VHI HA RRM KA+QRDLYGDR + PI
Sbjct: 400  LQAYTGRRKCDNRDDFRNKRFELAAELLERELKVHIAHARRRMEKALQRDLYGDRQVHPI 459

Query: 96   EHYLDASIITNGLSRAFSTGAWSHPFKKMERI 1
            EHYLDASIITNGLSRAFSTGAW+H FK+MERI
Sbjct: 460  EHYLDASIITNGLSRAFSTGAWAHAFKRMERI 491


>ref|XP_002324332.2| DNA-directed RNA polymerase family protein [Populus trichocarpa]
            gi|550317882|gb|EEF02897.2| DNA-directed RNA polymerase
            family protein [Populus trichocarpa]
          Length = 1181

 Score =  603 bits (1555), Expect = e-170
 Identities = 289/453 (63%), Positives = 352/453 (77%), Gaps = 2/453 (0%)
 Frame = -1

Query: 1353 MDMTEVRDLGEVFLNNFCKKASMAFFNEYGLISHQINSYNEFTKTGIQNLFDSIGEIVVE 1174
            MD T + +LG+  L +FCKKA+  FF+EYGLISHQINSYN F  +G+Q +FDS GE+ VE
Sbjct: 31   MDTTNLNELGKETLQSFCKKAASLFFDEYGLISHQINSYNAFINSGLQRVFDSFGEVAVE 90

Query: 1173 PGYDPSRKGENGWRYASLKFGKVTLEPPKLWSGDQGDEFLNFLPRHARLQNMTYSSRMKV 994
            PGYD S++ +  WR AS++FGKVTL+ P  W G   D   N  PRHARLQNMTYS+RMK+
Sbjct: 91   PGYDSSKQKDGEWRRASVRFGKVTLDRPSFWGGTSSDAEHNMFPRHARLQNMTYSARMKI 150

Query: 993  QIHFQVYTQALVRSDKFKTGQEQYLQKDVLSEESRDILIGRIPVMVKSDLCWMHKAEKGD 814
             ++ QVYTQ + RSDKFKTG ++ +QK+V+  E+R+I+IGRIPVMVKSDLCW+   EKGD
Sbjct: 151  HVNVQVYTQTVGRSDKFKTGIDKVVQKNVVHTENREIIIGRIPVMVKSDLCWLTTVEKGD 210

Query: 813  CDFDHGGYFIIKGAEKTFIAQEQICLKRLWLSNKPSWTVAYRSEFKRRRVYLKLV-APEV 637
            CDFDHGGYF+IKGAEK FIAQEQIC+KRLW+SN   WTV+Y+SE KR R+ ++LV   ++
Sbjct: 211  CDFDHGGYFLIKGAEKVFIAQEQICMKRLWISNSQGWTVSYKSEVKRNRLIVRLVELSKL 270

Query: 636  ENIRGEKV-LTAYFLATQIPVWILFFALGVSSDKEVVDLIDYTTDDASIINILFASIYDA 460
            E I+GEK  L  YFL+T+IP+WILFFALGV SDKEV+DLIDY ++DASI+NI FASI+DA
Sbjct: 271  EYIKGEKKGLCVYFLSTEIPLWILFFALGVRSDKEVIDLIDYASNDASIVNIFFASIHDA 330

Query: 459  DKNCADFRRRGKALSRVHDLMKKCRFPPEEPIEDCISKYLFASLTSLKQKAHFLGYMVKC 280
            D+ C  FRR  +AL  V  L+KK RFPP+E IED IS YLF  L S + KA FLGYMVKC
Sbjct: 331  DEKCEHFRREDRALDYVDKLLKKTRFPPKESIEDAISAYLFPRLNSRRHKARFLGYMVKC 390

Query: 279  LLQAYTGQRKCDSRDDFRNKXXXXXXXXXXXXXRVHIKHAERRMVKAMQRDLYGDRSLRP 100
            LL+AYTG RKCD+RD FRNK             +VH+ HA RRM KA+QRDLYGDR + P
Sbjct: 391  LLEAYTGHRKCDNRDSFRNKRFELASELLERELKVHVSHALRRMTKALQRDLYGDRDVHP 450

Query: 99   IEHYLDASIITNGLSRAFSTGAWSHPFKKMERI 1
            IEHYLDASI+TNGL+RAFSTGAW HPFK MER+
Sbjct: 451  IEHYLDASIVTNGLTRAFSTGAWCHPFKWMERV 483


>gb|ABG29321.1| DNA-directed RNA polymerase, putative [Solanum bulbocastanum]
          Length = 1018

 Score =  602 bits (1553), Expect = e-169
 Identities = 303/506 (59%), Positives = 376/506 (74%), Gaps = 13/506 (2%)
 Frame = -1

Query: 1479 LILMGISKDTGTSSKNGNLSNGVXXXXXXXXXXXXXXXDGFEMDMTE------VRDLGEV 1318
            + +  I +D G SS     SNG                  ++ D  E       ++LG  
Sbjct: 7    MTISNIMEDVGCSSGKEKTSNGSTMMDFDVDGLFEVDDYDWDEDEDEDDNLDMAKELGGG 66

Query: 1317 FLNNFCKKASMAFFNEYGLISHQINSYNEFTKTGIQNLFDSIGEIVVEPGYDPSRKGENG 1138
            FL NFCKKAS  FF +YG+ISHQI+SYN+F + GIQ +FDS+GEI VEPGYDPS+KGE  
Sbjct: 67   FLRNFCKKASAGFFEKYGVISHQIDSYNDFIRYGIQRVFDSVGEIHVEPGYDPSKKGEGD 126

Query: 1137 WRYASLKFGKVTLEPPKLWSGDQ-----GDEFLNFLPRHARLQNMTYSSRMKVQIHFQVY 973
            W++AS+KFGKVTL+ PK W+G++     G+E+LN  PRHARLQNMTYS+R+ V+ H  V+
Sbjct: 127  WKHASVKFGKVTLDRPKFWAGEKFSAYNGEEYLNLWPRHARLQNMTYSARIIVETH--VF 184

Query: 972  TQALVRSDKFKTGQEQYLQKDVLSEESRDILIGRIPVMVKSDLCWMHKAEKGDCDFDHGG 793
            T+ LVRSDKFKTG EQ++ K+ + E+ RD+ IGRIPVMV S+LCWM  A++ DC+FDHGG
Sbjct: 185  TKKLVRSDKFKTGVEQFVDKECVMEDKRDVFIGRIPVMVNSELCWMSGADRPDCEFDHGG 244

Query: 792  YFIIKGAEKTFIAQEQICLKRLWLSNKPSWTVAYRSEFKRRRVYLKLVAP-EVENIRGE- 619
            YFI+KGAEK FIAQEQICLKRLW+SN  +W VAYRS  KR RVYLKL    + E+I+GE 
Sbjct: 245  YFIVKGAEKIFIAQEQICLKRLWVSNHSTWMVAYRSGEKRNRVYLKLTETLKHEHIKGEA 304

Query: 618  KVLTAYFLATQIPVWILFFALGVSSDKEVVDLIDYTTDDASIINILFASIYDADKNCADF 439
            K L+ YF A ++P+W+LFFALGVSSD+EVVDLID    D +IINIL ASI+DADKNC DF
Sbjct: 305  KALSVYFFA-EMPIWVLFFALGVSSDREVVDLIDVDIKDTNIINILVASIHDADKNCEDF 363

Query: 438  RRRGKALSRVHDLMKKCRFPPEEPIEDCISKYLFASLTSLKQKAHFLGYMVKCLLQAYTG 259
            R+  KAL+ V  L+K C+FPP+E +E+CI +YLF +L+ LKQKA FLGYMVKCLL +Y G
Sbjct: 364  RKGKKALAYVDRLVKSCKFPPQESVEECIKEYLFPNLSGLKQKARFLGYMVKCLLLSYIG 423

Query: 258  QRKCDSRDDFRNKXXXXXXXXXXXXXRVHIKHAERRMVKAMQRDLYGDRSLRPIEHYLDA 79
            +RK D+RDDFRNK             RVH+KHAERRMVKA+QRDL GDR ++PIEHYLDA
Sbjct: 424  RRKVDNRDDFRNKRLDLAGELLERELRVHVKHAERRMVKALQRDLCGDRQVQPIEHYLDA 483

Query: 78   SIITNGLSRAFSTGAWSHPFKKMERI 1
            SIITNGLSRAFSTG W HP+K+MER+
Sbjct: 484  SIITNGLSRAFSTGHWCHPYKRMERV 509


>ref|XP_004288915.1| PREDICTED: DNA-directed RNA polymerase D subunit 2a-like [Fragaria
            vesca subsp. vesca]
          Length = 1201

 Score =  598 bits (1541), Expect = e-168
 Identities = 295/452 (65%), Positives = 346/452 (76%), Gaps = 2/452 (0%)
 Frame = -1

Query: 1350 DMTEVRDLGEVFLNNFCKKASMAFFNEYGLISHQINSYNEFTKTGIQNLFDSIGEIVVEP 1171
            D T + DLGEVFL+ FCK+AS++FF EYGL+SHQINSYN+F + GIQ +FDS GEIVVEP
Sbjct: 42   DSTTLHDLGEVFLDEFCKEASVSFFKEYGLLSHQINSYNDFVENGIQRVFDSFGEIVVEP 101

Query: 1170 GYDPSRKGENGWRYASLKFGKVTLEPPKLWSGDQGDEFLNFLPRHARLQNMTYSSRMKVQ 991
             +DPS+KG   WR+A++KFGKVTL  P  W G   D+  N LPRHARLQNMTYS+RM V 
Sbjct: 102  NFDPSKKGNADWRFAAIKFGKVTLSKPCFWGGSDSDKEYNMLPRHARLQNMTYSARMSVN 161

Query: 990  IHFQVYTQALVRSDKFKTGQEQYLQKDVLSEESRDILIGRIPVMVKSDLCWMHKAEKGDC 811
            I  QVYTQ LV SDKFKTG EQ L+K  LS +SRDI+IGRIPVMVKS+LCWM   EKGDC
Sbjct: 162  ITVQVYTQNLVESDKFKTGTEQLLEKTTLSTDSRDIIIGRIPVMVKSNLCWMKGVEKGDC 221

Query: 810  DFDHGGYFIIKGAEKTFIAQEQICLKRLWLSNKPSWTVAYRSEFKRRRVYLKLVA-PEVE 634
            +FD GGYFII GAEKTFIAQEQ CLKRL ++N    TVAYRSE KR R+ ++L    ++E
Sbjct: 222  EFDQGGYFIINGAEKTFIAQEQSCLKRLLITNSQGLTVAYRSEVKRHRLIIRLSGISKLE 281

Query: 633  NIRG-EKVLTAYFLATQIPVWILFFALGVSSDKEVVDLIDYTTDDASIINILFASIYDAD 457
            N+ G EKVL+ YF++T+IPVWI FFALGVSSDKEV+DLIDY  +DASI NILFASI DAD
Sbjct: 282  NVEGVEKVLSVYFMSTEIPVWIWFFALGVSSDKEVIDLIDYGIEDASISNILFASIRDAD 341

Query: 456  KNCADFRRRGKALSRVHDLMKKCRFPPEEPIEDCISKYLFASLTSLKQKAHFLGYMVKCL 277
            +   DFRR   AL  V + +K   FPP E +EDCIS YLF ++  LKQKA FLGYMVKCL
Sbjct: 342  ERKDDFRRGNNALRYVENAIKSTTFPPGESVEDCISMYLFPNMRGLKQKARFLGYMVKCL 401

Query: 276  LQAYTGQRKCDSRDDFRNKXXXXXXXXXXXXXRVHIKHAERRMVKAMQRDLYGDRSLRPI 97
            LQ   G RKCD+RDDFRNK             + H+ HA R+M KA+QRDL GD  +RP+
Sbjct: 402  LQTSIGLRKCDNRDDFRNKRLELAGELLERELKAHVSHARRKMAKALQRDLGGDHVVRPV 461

Query: 96   EHYLDASIITNGLSRAFSTGAWSHPFKKMERI 1
            EHYLDASI+TNG+SRAFSTGAW HPFK+MERI
Sbjct: 462  EHYLDASIVTNGVSRAFSTGAWCHPFKRMERI 493


>ref|XP_002515428.1| DNA-directed RNA polymerase subunit, putative [Ricinus communis]
            gi|223545372|gb|EEF46877.1| DNA-directed RNA polymerase
            subunit, putative [Ricinus communis]
          Length = 1203

 Score =  594 bits (1532), Expect = e-167
 Identities = 295/450 (65%), Positives = 352/450 (78%), Gaps = 2/450 (0%)
 Frame = -1

Query: 1344 TEVRDLGEVFLNNFCKKASMAFFNEYGLISHQINSYNEFTKTGIQNLFDSIGEIVVEPGY 1165
            T + D+GE  L +FC KA+  FFNEYGLISHQINSYN+F   GIQ  FDS GE+VVEPGY
Sbjct: 49   TSLTDIGEAKLKDFCNKAATLFFNEYGLISHQINSYNDFINNGIQKAFDSFGELVVEPGY 108

Query: 1164 DPSRKGENGWRYASLKFGKVTLEPPKLWSGDQGDEFLNFLPRHARLQNMTYSSRMKVQIH 985
            DPS+KGEN WRYAS+KFGKV LE P  WSG   DE    LPRHARLQNMTYSS+MKV + 
Sbjct: 109  DPSKKGENEWRYASVKFGKVALEKPTFWSG--ADEH-KMLPRHARLQNMTYSSKMKVNVS 165

Query: 984  FQVYTQALVRSDKFKTGQEQYLQKDVLSEESRDILIGRIPVMVKSDLCWMHKAEKGDCDF 805
             +VYT+ +VRSDKFKTG++QY+ K+VL+ ++R+I IG +PVMVKSDLCWM  AEKGDCDF
Sbjct: 166  VEVYTRKVVRSDKFKTGKDQYVDKEVLNTDNRNITIGSLPVMVKSDLCWMKTAEKGDCDF 225

Query: 804  DHGGYFIIKGAEKTFIAQEQICLKRLWLSNKPSWTVAYRSEFKRRRVYLKLVA-PEVENI 628
            DHGGYF+IKGAEK FIAQEQICLKRLW+SN   WTV+Y+SE KR R+ ++LV    +E++
Sbjct: 226  DHGGYFLIKGAEKVFIAQEQICLKRLWISNIQGWTVSYKSEIKRNRLIVRLVGLSALEDV 285

Query: 627  RGE-KVLTAYFLATQIPVWILFFALGVSSDKEVVDLIDYTTDDASIINILFASIYDADKN 451
            + E K LT YFL+T+IP+WILFFALGV+SDKEV+DLI Y ++DA I+NI FASI+DAD+ 
Sbjct: 286  KAEKKCLTVYFLSTEIPLWILFFALGVTSDKEVIDLIGYGSNDARIVNIFFASIHDADEK 345

Query: 450  CADFRRRGKALSRVHDLMKKCRFPPEEPIEDCISKYLFASLTSLKQKAHFLGYMVKCLLQ 271
               FRR  +AL  V   ++  RFPP E  ED    YLF +L SL+QKA FLGYMVKCLLQ
Sbjct: 346  TEGFRRGKEALEYVVRQIRGTRFPPGEN-EDFFLLYLFPTLHSLRQKARFLGYMVKCLLQ 404

Query: 270  AYTGQRKCDSRDDFRNKXXXXXXXXXXXXXRVHIKHAERRMVKAMQRDLYGDRSLRPIEH 91
            AY GQRKC++ D FRNK             +VHI HA RRM KA+Q+DLYGDR +RPIEH
Sbjct: 405  AYNGQRKCNNWDSFRNKRFELAKELLERELKVHIAHARRRMAKALQKDLYGDRDVRPIEH 464

Query: 90   YLDASIITNGLSRAFSTGAWSHPFKKMERI 1
            YLDASI+TNGLSRAFSTGAWSHP+K+MERI
Sbjct: 465  YLDASIVTNGLSRAFSTGAWSHPYKRMERI 494


>gb|EYU29217.1| hypothetical protein MIMGU_mgv1a000367mg [Mimulus guttatus]
          Length = 1211

 Score =  576 bits (1485), Expect = e-161
 Identities = 289/492 (58%), Positives = 355/492 (72%), Gaps = 7/492 (1%)
 Frame = -1

Query: 1458 KDTGTSSKNGNLSNGVXXXXXXXXXXXXXXXDGFEMDMTEVRDLGEVFLNNFCKKASMAF 1279
            ++ G SSKN   SNG                   E+D T +++L E FL   C+KAS AF
Sbjct: 8    EEAGPSSKNDKFSNGTTQMDIDEDIEFDSSESEDELD-TAMQELSEGFLKVSCRKASTAF 66

Query: 1278 FNEYGLISHQINSYNEFTKTGIQNLFDSIGEIVVEPGYDPSRKGENGWRYASLKFGKVTL 1099
            F++YGLISHQINSYN+F   GIQ +FDSIGEIVVEPGYDPS+KGE  W+ A LKFGKVTL
Sbjct: 67   FDQYGLISHQINSYNDFVNHGIQKVFDSIGEIVVEPGYDPSKKGEGDWKRACLKFGKVTL 126

Query: 1098 EPPKLWSG------DQGDEFLNFLPRHARLQNMTYSSRMKVQIHFQVYTQALVRSDKFKT 937
            E P  W+G      D   ++L  LPRHARLQNMTY++++KV+ H QVYT+ L RSDKF T
Sbjct: 127  ERPTFWTGEKFSSVDGAKDYLELLPRHARLQNMTYAAKIKVETHLQVYTKGLNRSDKFTT 186

Query: 936  GQEQYLQKDVLSEESRDILIGRIPVMVKSDLCWMHKAEKGDCDFDHGGYFIIKGAEKTFI 757
            G E  ++K +L+E   ++  GR+PVMVKSDLCWM   +K DC+FD GGYF+IKGAEKTFI
Sbjct: 187  GVENTVEKTLLNEYHNEVNFGRLPVMVKSDLCWMKSLDKKDCEFDQGGYFVIKGAEKTFI 246

Query: 756  AQEQICLKRLWLSNKPSWTVAYRSEFKRRRVYLKLVAPEVENIRG-EKVLTAYFLATQIP 580
            AQEQ+CLKRLW++  PSWTV+YR   +R RVY+KLV P++E++ G +K+LT YF  T+I 
Sbjct: 247  AQEQLCLKRLWVTKIPSWTVSYRPVARRNRVYIKLV-PKMEHVIGADKILTVYFYVTEIS 305

Query: 579  VWILFFALGVSSDKEVVDLIDYTTDDASIINILFASIYDADKNCADFRRRGKALSRVHDL 400
            VW+LFFALG+ +DKEVV LID   +D+ I NIL ASIYDADK    FR+ G +   + +L
Sbjct: 306  VWVLFFALGIPNDKEVVKLIDLDIEDSDIANILIASIYDADKKYEGFRKEGNSSKHIKEL 365

Query: 399  MKKCRFPPEEPIEDCISKYLFASLTSLKQKAHFLGYMVKCLLQAYTGQRKCDSRDDFRNK 220
            M+ C+FPP E IED I  YLF  L +  QKA FLGYMVKCLL+AY G+RK ++RDDFRNK
Sbjct: 366  MQNCKFPPTESIEDLIKNYLFPHLKTPIQKACFLGYMVKCLLEAYKGRRKVENRDDFRNK 425

Query: 219  XXXXXXXXXXXXXRVHIKHAERRMVKAMQRDLYGDRSLRPIEHYLDASIITNGLSRAFST 40
                         RVHIKHAERRM KAMQRDLY DR ++ I+ YLDASI+TNGLSRAFST
Sbjct: 426  RLELAGELLERELRVHIKHAERRMTKAMQRDLYRDREVQSIDQYLDASIVTNGLSRAFST 485

Query: 39   GAWSHPFKKMER 4
            GAW HPFK+MER
Sbjct: 486  GAWCHPFKRMER 497


>ref|XP_004501385.1| PREDICTED: DNA-directed RNA polymerase D subunit 2a-like [Cicer
            arietinum]
          Length = 1199

 Score =  566 bits (1458), Expect = e-158
 Identities = 271/449 (60%), Positives = 346/449 (77%), Gaps = 3/449 (0%)
 Frame = -1

Query: 1338 VRDLGEVFLNNFCKKASMAFFNEYGLISHQINSYNEFTKTGIQNLFDSIGEIVVEPGYDP 1159
            +++LG+  +  FCKKAS+ FF+EYGLISHQINSYN+F  +G+QN FDS G++ V PG+DP
Sbjct: 44   LKELGDDMVRYFCKKASIMFFDEYGLISHQINSYNQFATSGLQNTFDSFGDLTVTPGFDP 103

Query: 1158 SRKGENG-WRYASLKFGKVTLEPPKLWSGDQGDEFLNFLPRHARLQNMTYSSRMKVQIHF 982
            S+KG+N  +RYAS+KFGKVTL+ P  W G+   + +  LPRHARLQ MTY+S+MKV +  
Sbjct: 104  SKKGDNEHYRYASVKFGKVTLDRPMFWCGEGNTQEMKMLPRHARLQRMTYASKMKVNVQV 163

Query: 981  QVYTQALVRSDKFKTGQEQYLQKDVLSEESRDILIGRIPVMVKSDLCWMHKAEKGDCDFD 802
            QVY    VRSDKFKTG+E+Y+ ++++ +E+R+I IGR+PVMVKSDLCWM+  EKGDC+FD
Sbjct: 164  QVYIPKKVRSDKFKTGKEEYIDREIIMDENREITIGRLPVMVKSDLCWMNGVEKGDCEFD 223

Query: 801  HGGYFIIKGAEKTFIAQEQICLKRLWLSNKPSWTVAYRSEFKRRRVYLKLVA-PEVENIR 625
            HGGYF+IKGAEK FIAQEQI LKRLW++N P W VAY+S+ KR R+ +KLV    VE I+
Sbjct: 224  HGGYFLIKGAEKIFIAQEQIFLKRLWVTNVPYWAVAYKSQMKRNRMVVKLVENTTVEGIK 283

Query: 624  -GEKVLTAYFLATQIPVWILFFALGVSSDKEVVDLIDYTTDDASIINILFASIYDADKNC 448
             GEKVLT YFL+ +IPVW+LFFALGV+SDK++VDLIDY   D  I NILFASI +AD+ C
Sbjct: 284  NGEKVLTVYFLSVEIPVWLLFFALGVTSDKQIVDLIDYGEGDGRIQNILFASIREADEKC 343

Query: 447  ADFRRRGKALSRVHDLMKKCRFPPEEPIEDCISKYLFASLTSLKQKAHFLGYMVKCLLQA 268
              FRR   AL  + + +K  +FPP E I++C++ Y+F ++  L +KA +L YMVK LL A
Sbjct: 344  EQFRRGKNALLYIEERVKGVQFPPPESIDECLNMYVFPNIKGLNRKARYLAYMVKVLLLA 403

Query: 267  YTGQRKCDSRDDFRNKXXXXXXXXXXXXXRVHIKHAERRMVKAMQRDLYGDRSLRPIEHY 88
            YTG+RK D+RDDFRNK             +VHI HA +RM KA+QRDLYGDR +  IEHY
Sbjct: 404  YTGRRKTDNRDDFRNKRLELAGELLERELKVHIAHARKRMAKALQRDLYGDRDVHQIEHY 463

Query: 87   LDASIITNGLSRAFSTGAWSHPFKKMERI 1
            LDASIITNGL RAFSTGAW+HP+K+MERI
Sbjct: 464  LDASIITNGLQRAFSTGAWTHPYKRMERI 492