BLASTX nr result

ID: Paeonia25_contig00021792 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia25_contig00021792
         (798 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006487998.1| PREDICTED: 50S ribosomal protein L9, chlorop...   247   4e-63
ref|XP_006424438.1| hypothetical protein CICLE_v10029219mg [Citr...   246   5e-63
ref|XP_004147275.1| PREDICTED: 50S ribosomal protein L9, chlorop...   243   8e-62
ref|XP_002274311.1| PREDICTED: 50S ribosomal protein L9, chlorop...   240   4e-61
ref|XP_007016061.1| Ribosomal protein L9 isoform 1 [Theobroma ca...   236   6e-60
ref|XP_006384967.1| hypothetical protein POPTR_0004s22660g [Popu...   230   5e-58
emb|CBI17129.3| unnamed protein product [Vitis vinifera]              228   2e-57
gb|EXC24911.1| 50S ribosomal protein L9 [Morus notabilis]             228   3e-57
ref|XP_004250984.1| PREDICTED: 50S ribosomal protein L9, chlorop...   226   6e-57
ref|XP_007205945.1| hypothetical protein PRUPE_ppa011810mg [Prun...   224   2e-56
ref|XP_004294541.1| PREDICTED: 50S ribosomal protein L9, chlorop...   224   3e-56
ref|XP_006349040.1| PREDICTED: 50S ribosomal protein L9, chlorop...   224   4e-56
ref|XP_002875701.1| hypothetical protein ARALYDRAFT_484888 [Arab...   224   4e-56
ref|NP_190075.1| 50S ribosomal protein L9 [Arabidopsis thaliana]...   223   8e-56
ref|XP_006419091.1| hypothetical protein EUTSA_v10002672mg [Eutr...   222   1e-55
ref|XP_006843127.1| hypothetical protein AMTR_s00140p00103640 [A...   221   2e-55
gb|EYU37024.1| hypothetical protein MIMGU_mgv1a014206mg [Mimulus...   219   9e-55
ref|XP_006291875.1| hypothetical protein CARUB_v10018052mg [Caps...   219   1e-54
ref|NP_001235742.1| uncharacterized protein LOC100500279 [Glycin...   219   1e-54
ref|XP_007132340.1| hypothetical protein PHAVU_011G086500g [Phas...   218   3e-54

>ref|XP_006487998.1| PREDICTED: 50S ribosomal protein L9, chloroplastic-like [Citrus
           sinensis]
          Length = 227

 Score =  247 bits (630), Expect = 4e-63
 Identities = 127/179 (70%), Positives = 142/179 (79%)
 Frame = +1

Query: 82  QGFGKNINETTTFSDKRTAMVVVAQKKASKTRKIILKEDVAELGKKGQLLDVKAGYYRNY 261
           Q FG  +NE+    DKR+ ++V+AQ+KA KTRKIILKEDVAELGKKGQLLDVKAG+YRNY
Sbjct: 49  QSFGNTVNESVKLPDKRSVLLVLAQRKAKKTRKIILKEDVAELGKKGQLLDVKAGFYRNY 108

Query: 262 LHPLGKAQIVTSLLLXXXXXXXXXXXXXXXXXXXXXQQLATIFETVNTFKVKRKGGKGKL 441
           LHP+GKAQIVT LLL                     QQLA IFETV  FKVKRKGGKGK 
Sbjct: 109 LHPMGKAQIVTPLLLKEMKMEEERIEAEKKRVKEEAQQLALIFETVGAFKVKRKGGKGKQ 168

Query: 442 IFGSVTAQDLVDIIKAQLQRDVDKRDVSLPEIRETGEYIAELKLHPEVTARVKLNVYAN 618
           IFGSVTAQD+VDIIKAQLQRDVDK+ V LPEIRETGEYIA+LKLHPEVTAR++LNV+AN
Sbjct: 169 IFGSVTAQDVVDIIKAQLQRDVDKKIVDLPEIRETGEYIAQLKLHPEVTARIRLNVFAN 227


>ref|XP_006424438.1| hypothetical protein CICLE_v10029219mg [Citrus clementina]
           gi|567863570|ref|XP_006424439.1| hypothetical protein
           CICLE_v10029219mg [Citrus clementina]
           gi|557526372|gb|ESR37678.1| hypothetical protein
           CICLE_v10029219mg [Citrus clementina]
           gi|557526373|gb|ESR37679.1| hypothetical protein
           CICLE_v10029219mg [Citrus clementina]
          Length = 227

 Score =  246 bits (629), Expect = 5e-63
 Identities = 128/179 (71%), Positives = 142/179 (79%)
 Frame = +1

Query: 82  QGFGKNINETTTFSDKRTAMVVVAQKKASKTRKIILKEDVAELGKKGQLLDVKAGYYRNY 261
           Q FG  +NE+    DKR+A++V+AQKKA KTRKIILKEDV ELGKKGQLLDVKAG+YRNY
Sbjct: 49  QTFGNTVNESVKLPDKRSALLVLAQKKAKKTRKIILKEDVGELGKKGQLLDVKAGFYRNY 108

Query: 262 LHPLGKAQIVTSLLLXXXXXXXXXXXXXXXXXXXXXQQLATIFETVNTFKVKRKGGKGKL 441
           LHP+GKAQIVT LLL                     QQLA IFETV  FKVKRKGGKGK 
Sbjct: 109 LHPMGKAQIVTPLLLKEMKMEEERIEAEKKRVKEEAQQLALIFETVGAFKVKRKGGKGKQ 168

Query: 442 IFGSVTAQDLVDIIKAQLQRDVDKRDVSLPEIRETGEYIAELKLHPEVTARVKLNVYAN 618
           IFGSVTAQD+VDIIKAQLQRDVDK+ V LPEIRETGEYIA+LKLHPEVTAR++LNV+AN
Sbjct: 169 IFGSVTAQDVVDIIKAQLQRDVDKKIVVLPEIRETGEYIAQLKLHPEVTARIRLNVFAN 227


>ref|XP_004147275.1| PREDICTED: 50S ribosomal protein L9, chloroplastic-like [Cucumis
           sativus]
          Length = 198

 Score =  243 bits (619), Expect = 8e-62
 Identities = 128/174 (73%), Positives = 140/174 (80%)
 Frame = +1

Query: 97  NINETTTFSDKRTAMVVVAQKKASKTRKIILKEDVAELGKKGQLLDVKAGYYRNYLHPLG 276
           NI ET  FS  RTAMVVVAQKKASK+RKIILKEDVA+LGKKGQL+DVKAGYYRNYL P+G
Sbjct: 25  NIEETAKFSYGRTAMVVVAQKKASKSRKIILKEDVADLGKKGQLIDVKAGYYRNYLFPMG 84

Query: 277 KAQIVTSLLLXXXXXXXXXXXXXXXXXXXXXQQLATIFETVNTFKVKRKGGKGKLIFGSV 456
           KAQIVT +LL                     QQLA IF+TV  FKVKRKGGKGK IFG+V
Sbjct: 85  KAQIVTPVLLKEMRIEEERIEAEKKRVIEEAQQLALIFQTVGAFKVKRKGGKGKQIFGTV 144

Query: 457 TAQDLVDIIKAQLQRDVDKRDVSLPEIRETGEYIAELKLHPEVTARVKLNVYAN 618
           TAQDLVDIIKAQLQRD+DKR V LPEIRETGEY+AELKLHPEVTARV++NV+AN
Sbjct: 145 TAQDLVDIIKAQLQRDIDKRIVDLPEIRETGEYVAELKLHPEVTARVRVNVFAN 198


>ref|XP_002274311.1| PREDICTED: 50S ribosomal protein L9, chloroplastic [Vitis vinifera]
          Length = 195

 Score =  240 bits (613), Expect = 4e-61
 Identities = 128/174 (73%), Positives = 134/174 (77%)
 Frame = +1

Query: 97  NINETTTFSDKRTAMVVVAQKKASKTRKIILKEDVAELGKKGQLLDVKAGYYRNYLHPLG 276
           N N+   FSD R   VVVAQKKA K RKIILKEDVAELGKKGQLLDVKAGYYRNYL P+G
Sbjct: 22  NFNQPRKFSDNRMVFVVVAQKKAKKLRKIILKEDVAELGKKGQLLDVKAGYYRNYLQPMG 81

Query: 277 KAQIVTSLLLXXXXXXXXXXXXXXXXXXXXXQQLATIFETVNTFKVKRKGGKGKLIFGSV 456
            AQIVT LLL                     QQ+A +FETV  FKVKRKGGKGK IFGSV
Sbjct: 82  MAQIVTPLLLKEMRMEEERIEAEKKRVKEEAQQMALMFETVGAFKVKRKGGKGKQIFGSV 141

Query: 457 TAQDLVDIIKAQLQRDVDKRDVSLPEIRETGEYIAELKLHPEVTARVKLNVYAN 618
           TAQDL DIIKAQLQRDVDKR VSLPEIRETGEY+AELKLHPEVTARV+LNVYAN
Sbjct: 142 TAQDLTDIIKAQLQRDVDKRIVSLPEIRETGEYVAELKLHPEVTARVRLNVYAN 195


>ref|XP_007016061.1| Ribosomal protein L9 isoform 1 [Theobroma cacao]
           gi|590587810|ref|XP_007016062.1| Ribosomal protein L9
           isoform 1 [Theobroma cacao] gi|508786424|gb|EOY33680.1|
           Ribosomal protein L9 isoform 1 [Theobroma cacao]
           gi|508786425|gb|EOY33681.1| Ribosomal protein L9 isoform
           1 [Theobroma cacao]
          Length = 192

 Score =  236 bits (603), Expect = 6e-60
 Identities = 126/177 (71%), Positives = 136/177 (76%)
 Frame = +1

Query: 88  FGKNINETTTFSDKRTAMVVVAQKKASKTRKIILKEDVAELGKKGQLLDVKAGYYRNYLH 267
           FG   NETT  +D+    VV AQKKA KTRKIILKEDV  LGKKG+LLDVKAGY+RNYL 
Sbjct: 16  FGGTQNETTKVTDRNRVFVVFAQKKAKKTRKIILKEDVEYLGKKGELLDVKAGYFRNYLL 75

Query: 268 PLGKAQIVTSLLLXXXXXXXXXXXXXXXXXXXXXQQLATIFETVNTFKVKRKGGKGKLIF 447
           P+GKAQI+T +LL                     QQLA IFETV  FKVKRKGGKGK IF
Sbjct: 76  PMGKAQIITPVLLKEMKMEEERIEAEKQRVKEEAQQLALIFETVGAFKVKRKGGKGKQIF 135

Query: 448 GSVTAQDLVDIIKAQLQRDVDKRDVSLPEIRETGEYIAELKLHPEVTARVKLNVYAN 618
           GSVT+QDLVDIIKAQLQRDVDKR VSLPEIRETGEY+AELKLHPEVTARV+LNVYAN
Sbjct: 136 GSVTSQDLVDIIKAQLQRDVDKRIVSLPEIRETGEYVAELKLHPEVTARVRLNVYAN 192


>ref|XP_006384967.1| hypothetical protein POPTR_0004s22660g [Populus trichocarpa]
           gi|118488503|gb|ABK96065.1| unknown [Populus
           trichocarpa] gi|550341735|gb|ERP62764.1| hypothetical
           protein POPTR_0004s22660g [Populus trichocarpa]
          Length = 198

 Score =  230 bits (586), Expect = 5e-58
 Identities = 123/178 (69%), Positives = 137/178 (76%)
 Frame = +1

Query: 85  GFGKNINETTTFSDKRTAMVVVAQKKASKTRKIILKEDVAELGKKGQLLDVKAGYYRNYL 264
           GF    NE + F DKR  M+V+AQKKA KTRKIILKEDV +LGKKGQL+DVKAG+YRN+L
Sbjct: 21  GFVGPTNEISKFPDKRIPMLVLAQKKAKKTRKIILKEDVTDLGKKGQLVDVKAGFYRNFL 80

Query: 265 HPLGKAQIVTSLLLXXXXXXXXXXXXXXXXXXXXXQQLATIFETVNTFKVKRKGGKGKLI 444
            P GKAQIVT  L+                     QQLA IFETV  FKVKRKGGKG+ I
Sbjct: 81  LPTGKAQIVTPGLVKEMRMEEERIEAEKKRVKEEAQQLALIFETVGAFKVKRKGGKGRQI 140

Query: 445 FGSVTAQDLVDIIKAQLQRDVDKRDVSLPEIRETGEYIAELKLHPEVTARVKLNVYAN 618
           FG+VTAQDLVDIIKAQ+QRDVDKR VSLP+IRETGEYIAELKLHPEVTA+V+LNVYAN
Sbjct: 141 FGTVTAQDLVDIIKAQIQRDVDKRIVSLPDIRETGEYIAELKLHPEVTAQVRLNVYAN 198


>emb|CBI17129.3| unnamed protein product [Vitis vinifera]
          Length = 162

 Score =  228 bits (582), Expect = 2e-57
 Identities = 122/159 (76%), Positives = 127/159 (79%)
 Frame = +1

Query: 142 VVVAQKKASKTRKIILKEDVAELGKKGQLLDVKAGYYRNYLHPLGKAQIVTSLLLXXXXX 321
           VVVAQKKA K RKIILKEDVAELGKKGQLLDVKAGYYRNYL P+G AQIVT LLL     
Sbjct: 4   VVVAQKKAKKLRKIILKEDVAELGKKGQLLDVKAGYYRNYLQPMGMAQIVTPLLLKEMRM 63

Query: 322 XXXXXXXXXXXXXXXXQQLATIFETVNTFKVKRKGGKGKLIFGSVTAQDLVDIIKAQLQR 501
                           QQ+A +FETV  FKVKRKGGKGK IFGSVTAQDL DIIKAQLQR
Sbjct: 64  EEERIEAEKKRVKEEAQQMALMFETVGAFKVKRKGGKGKQIFGSVTAQDLTDIIKAQLQR 123

Query: 502 DVDKRDVSLPEIRETGEYIAELKLHPEVTARVKLNVYAN 618
           DVDKR VSLPEIRETGEY+AELKLHPEVTARV+LNVYAN
Sbjct: 124 DVDKRIVSLPEIRETGEYVAELKLHPEVTARVRLNVYAN 162


>gb|EXC24911.1| 50S ribosomal protein L9 [Morus notabilis]
          Length = 220

 Score =  228 bits (580), Expect = 3e-57
 Identities = 123/178 (69%), Positives = 132/178 (74%)
 Frame = +1

Query: 82  QGFGKNINETTTFSDKRTAMVVVAQKKASKTRKIILKEDVAELGKKGQLLDVKAGYYRNY 261
           Q FG N NE    SD RT   ++AQKKA K R IILKEDV  LG KGQLL+VKAGYYRNY
Sbjct: 18  QRFGGNTNEAPKSSDPRTTFHILAQKKAKKARAIILKEDVPALGTKGQLLNVKAGYYRNY 77

Query: 262 LHPLGKAQIVTSLLLXXXXXXXXXXXXXXXXXXXXXQQLATIFETVNTFKVKRKGGKGKL 441
           LHP GKAQIVT +LL                     QQLA IFETV  FKVKRKGGKGK 
Sbjct: 78  LHPTGKAQIVTPVLLKEMKIEEERIEAEKKRVKEEAQQLALIFETVGAFKVKRKGGKGKQ 137

Query: 442 IFGSVTAQDLVDIIKAQLQRDVDKRDVSLPEIRETGEYIAELKLHPEVTARVKLNVYA 615
           IFGSVTAQDLVDIIKAQLQRDVDKR V+LPEIRETGEY+AELKLHPEVTA+V++NV A
Sbjct: 138 IFGSVTAQDLVDIIKAQLQRDVDKRIVTLPEIRETGEYVAELKLHPEVTAQVRVNVNA 195


>ref|XP_004250984.1| PREDICTED: 50S ribosomal protein L9, chloroplastic-like [Solanum
           lycopersicum]
          Length = 192

 Score =  226 bits (577), Expect = 6e-57
 Identities = 116/172 (67%), Positives = 135/172 (78%)
 Frame = +1

Query: 103 NETTTFSDKRTAMVVVAQKKASKTRKIILKEDVAELGKKGQLLDVKAGYYRNYLHPLGKA 282
           +ET  FS++ + + +VAQKKA K RKIILKED+++LGKKG LLDVKAG++RNYL PLGKA
Sbjct: 21  SETVKFSERTSILTIVAQKKAKKVRKIILKEDISQLGKKGDLLDVKAGFFRNYLLPLGKA 80

Query: 283 QIVTSLLLXXXXXXXXXXXXXXXXXXXXXQQLATIFETVNTFKVKRKGGKGKLIFGSVTA 462
           QIVT+ L+                     QQLA IFET+  FKVKRKGGKGK IFGSVTA
Sbjct: 81  QIVTAALIKEMKMEDEKIEAEKQRVKDEAQQLARIFETIGAFKVKRKGGKGKQIFGSVTA 140

Query: 463 QDLVDIIKAQLQRDVDKRDVSLPEIRETGEYIAELKLHPEVTARVKLNVYAN 618
           QDLVDIIKAQ+QRDVDK+ V+LPEIRETGEY+AELKLHPEVTARV+L VYAN
Sbjct: 141 QDLVDIIKAQIQRDVDKKIVNLPEIRETGEYVAELKLHPEVTARVRLTVYAN 192


>ref|XP_007205945.1| hypothetical protein PRUPE_ppa011810mg [Prunus persica]
           gi|462401587|gb|EMJ07144.1| hypothetical protein
           PRUPE_ppa011810mg [Prunus persica]
          Length = 195

 Score =  224 bits (572), Expect = 2e-56
 Identities = 121/179 (67%), Positives = 132/179 (73%)
 Frame = +1

Query: 82  QGFGKNINETTTFSDKRTAMVVVAQKKASKTRKIILKEDVAELGKKGQLLDVKAGYYRNY 261
           Q F  N NE    SD+RT +VV AQKKA K R IILKED+A+LGKKG+L  VKAGYYRNY
Sbjct: 17  QSFAANTNEACKLSDRRTGLVVFAQKKAKKARTIILKEDIADLGKKGELRSVKAGYYRNY 76

Query: 262 LHPLGKAQIVTSLLLXXXXXXXXXXXXXXXXXXXXXQQLATIFETVNTFKVKRKGGKGKL 441
           L PLGKAQ+VT +LL                     QQLA IFETV  FKVKRKGGKGKL
Sbjct: 77  LLPLGKAQLVTPVLLKEMKMEDERIEAEKIRVKEEAQQLAIIFETVGGFKVKRKGGKGKL 136

Query: 442 IFGSVTAQDLVDIIKAQLQRDVDKRDVSLPEIRETGEYIAELKLHPEVTARVKLNVYAN 618
           IFGSVT QDLVDIIKAQL RDVDKR VSLP+IRE GEYIAELKLHPEVTA+V++ V AN
Sbjct: 137 IFGSVTPQDLVDIIKAQLNRDVDKRIVSLPDIREIGEYIAELKLHPEVTAKVRVIVSAN 195


>ref|XP_004294541.1| PREDICTED: 50S ribosomal protein L9, chloroplastic-like [Fragaria
           vesca subsp. vesca]
          Length = 195

 Score =  224 bits (571), Expect = 3e-56
 Identities = 121/179 (67%), Positives = 136/179 (75%)
 Frame = +1

Query: 82  QGFGKNINETTTFSDKRTAMVVVAQKKASKTRKIILKEDVAELGKKGQLLDVKAGYYRNY 261
           Q F  NIN+ T  +D+ T+ VV+AQKKA K R IILKEDVA+LGK+GQL+ VKAGY+RN+
Sbjct: 17  QSFTGNINQATKTADRATSFVVIAQKKAKKARTIILKEDVADLGKQGQLVSVKAGYFRNF 76

Query: 262 LHPLGKAQIVTSLLLXXXXXXXXXXXXXXXXXXXXXQQLATIFETVNTFKVKRKGGKGKL 441
           L P GKAQIVT LLL                     QQLA IFETV  FKVKRKGGKGKL
Sbjct: 77  LLPTGKAQIVTPLLLKEMKVEEERIEAEKKRVKEEAQQLALIFETVGGFKVKRKGGKGKL 136

Query: 442 IFGSVTAQDLVDIIKAQLQRDVDKRDVSLPEIRETGEYIAELKLHPEVTARVKLNVYAN 618
           IFGSVTAQDLVDIIKAQLQRDVDKR VSLP+IRE GEYIAELKLHPEV+A+V++ V AN
Sbjct: 137 IFGSVTAQDLVDIIKAQLQRDVDKRIVSLPDIREVGEYIAELKLHPEVSAKVRVIVSAN 195


>ref|XP_006349040.1| PREDICTED: 50S ribosomal protein L9, chloroplastic-like isoform X1
           [Solanum tuberosum]
          Length = 192

 Score =  224 bits (570), Expect = 4e-56
 Identities = 115/172 (66%), Positives = 134/172 (77%)
 Frame = +1

Query: 103 NETTTFSDKRTAMVVVAQKKASKTRKIILKEDVAELGKKGQLLDVKAGYYRNYLHPLGKA 282
           +ET  FS++ + + +VAQKK  K RKIILKED+++LGKKG LLDVKAG++RNYL PLGKA
Sbjct: 21  SETVKFSERTSILTIVAQKKTKKVRKIILKEDISQLGKKGDLLDVKAGFFRNYLLPLGKA 80

Query: 283 QIVTSLLLXXXXXXXXXXXXXXXXXXXXXQQLATIFETVNTFKVKRKGGKGKLIFGSVTA 462
           QIVT+ L+                     QQLA IFET+  FKVKRKGGKGK IFGSVTA
Sbjct: 81  QIVTAALIKEMKMEDEKVEAEKQRVKDEAQQLARIFETIGAFKVKRKGGKGKQIFGSVTA 140

Query: 463 QDLVDIIKAQLQRDVDKRDVSLPEIRETGEYIAELKLHPEVTARVKLNVYAN 618
           QDLVDIIKAQ+QRDVDK+ V+LPEIRETGEYIAELKLHPEVTARV+L V+AN
Sbjct: 141 QDLVDIIKAQIQRDVDKKIVNLPEIRETGEYIAELKLHPEVTARVRLTVFAN 192


>ref|XP_002875701.1| hypothetical protein ARALYDRAFT_484888 [Arabidopsis lyrata subsp.
           lyrata] gi|297321539|gb|EFH51960.1| hypothetical protein
           ARALYDRAFT_484888 [Arabidopsis lyrata subsp. lyrata]
          Length = 197

 Score =  224 bits (570), Expect = 4e-56
 Identities = 117/177 (66%), Positives = 134/177 (75%)
 Frame = +1

Query: 88  FGKNINETTTFSDKRTAMVVVAQKKASKTRKIILKEDVAELGKKGQLLDVKAGYYRNYLH 267
           F    NET   S++R    VV+QKKA K RK+ILKEDV +LGK+GQLLDVKAG++RN+L 
Sbjct: 21  FNSGANETLKVSERRFKFEVVSQKKAKKLRKVILKEDVTDLGKQGQLLDVKAGFFRNFLL 80

Query: 268 PLGKAQIVTSLLLXXXXXXXXXXXXXXXXXXXXXQQLATIFETVNTFKVKRKGGKGKLIF 447
           P GKAQ++T LLL                     QQLA +FETV  FKVKRKGGKGK IF
Sbjct: 81  PTGKAQLMTPLLLKELKMEDERIEAEKQRVKEEAQQLALVFETVGAFKVKRKGGKGKQIF 140

Query: 448 GSVTAQDLVDIIKAQLQRDVDKRDVSLPEIRETGEYIAELKLHPEVTARVKLNVYAN 618
           GSVTAQDLVDIIKAQLQRD+DKR VSLPEIRETGEYIAELKLHP+VTARV++NV+AN
Sbjct: 141 GSVTAQDLVDIIKAQLQRDIDKRLVSLPEIRETGEYIAELKLHPDVTARVRINVFAN 197


>ref|NP_190075.1| 50S ribosomal protein L9 [Arabidopsis thaliana]
           gi|133028|sp|P25864.1|RK9_ARATH RecName: Full=50S
           ribosomal protein L9, chloroplastic; AltName: Full=CL9;
           Flags: Precursor gi|189096132|pdb|3BBO|J Chain J,
           Homology Model For The Spinach Chloroplast 50s Subunit
           Fitted To 9.4a Cryo-Em Map Of The 70s Chlororibosome
           gi|16499|emb|CAA77480.1| plastid ribosomal protein CL9
           [Arabidopsis thaliana] gi|16501|emb|CAA77594.1|
           Chloroplast ribosomal protein CL9 [Arabidopsis thaliana]
           gi|9798392|emb|CAC03539.1| RP19 gene for chloroplast
           ribosomal protein CL9 [Arabidopsis thaliana]
           gi|24030284|gb|AAN41314.1| putative RP19 gene for
           chloroplast ribosomal protein CL9 [Arabidopsis thaliana]
           gi|332644444|gb|AEE77965.1| 50S ribosomal protein L9
           [Arabidopsis thaliana]
          Length = 197

 Score =  223 bits (567), Expect = 8e-56
 Identities = 116/177 (65%), Positives = 135/177 (76%)
 Frame = +1

Query: 88  FGKNINETTTFSDKRTAMVVVAQKKASKTRKIILKEDVAELGKKGQLLDVKAGYYRNYLH 267
           F    NET   S++R    VV+QKKA K RK+ILKEDV +LGK+GQLLDVKAG++RN+L 
Sbjct: 21  FNGGANETLKVSERRFNFEVVSQKKAKKLRKVILKEDVTDLGKQGQLLDVKAGFFRNFLL 80

Query: 268 PLGKAQIVTSLLLXXXXXXXXXXXXXXXXXXXXXQQLATIFETVNTFKVKRKGGKGKLIF 447
           P GKAQ++T LLL                     QQLA +F+TV  FKVKRKGGKGKLIF
Sbjct: 81  PTGKAQLMTPLLLKELKMEDERIEAEKQRVKEEAQQLAMVFQTVGAFKVKRKGGKGKLIF 140

Query: 448 GSVTAQDLVDIIKAQLQRDVDKRDVSLPEIRETGEYIAELKLHPEVTARVKLNVYAN 618
           GSVTAQDLVDIIK+QLQ+D+DKR VSLPEIRETGEYIAELKLHP+VTARVK+NV+AN
Sbjct: 141 GSVTAQDLVDIIKSQLQKDIDKRLVSLPEIRETGEYIAELKLHPDVTARVKINVFAN 197


>ref|XP_006419091.1| hypothetical protein EUTSA_v10002672mg [Eutrema salsugineum]
           gi|567159724|ref|XP_006419092.1| hypothetical protein
           EUTSA_v10002672mg [Eutrema salsugineum]
           gi|557097019|gb|ESQ37527.1| hypothetical protein
           EUTSA_v10002672mg [Eutrema salsugineum]
           gi|557097020|gb|ESQ37528.1| hypothetical protein
           EUTSA_v10002672mg [Eutrema salsugineum]
          Length = 197

 Score =  222 bits (566), Expect = 1e-55
 Identities = 118/177 (66%), Positives = 133/177 (75%)
 Frame = +1

Query: 88  FGKNINETTTFSDKRTAMVVVAQKKASKTRKIILKEDVAELGKKGQLLDVKAGYYRNYLH 267
           F    NET   S +R+ + VVAQKK  K RK+ILKEDV+ LGK+GQLLDVKAG++RN+L 
Sbjct: 21  FNGAANETLKVSQRRSTLEVVAQKKTKKLRKVILKEDVSNLGKQGQLLDVKAGFFRNFLL 80

Query: 268 PLGKAQIVTSLLLXXXXXXXXXXXXXXXXXXXXXQQLATIFETVNTFKVKRKGGKGKLIF 447
           P GKAQ++T +LL                     QQLA IFETV  FKVKRKGGKGK IF
Sbjct: 81  PTGKAQLMTPILLKEMKMEDERIEAEKQRVKEEAQQLAMIFETVGAFKVKRKGGKGKQIF 140

Query: 448 GSVTAQDLVDIIKAQLQRDVDKRDVSLPEIRETGEYIAELKLHPEVTARVKLNVYAN 618
           GSVTAQDLVDIIKAQLQRD+DKR VSLPEIRETGEYIAELKLHP+V ARVKLNV+AN
Sbjct: 141 GSVTAQDLVDIIKAQLQRDIDKRLVSLPEIRETGEYIAELKLHPDVIARVKLNVFAN 197


>ref|XP_006843127.1| hypothetical protein AMTR_s00140p00103640 [Amborella trichopoda]
           gi|548845337|gb|ERN04802.1| hypothetical protein
           AMTR_s00140p00103640 [Amborella trichopoda]
          Length = 161

 Score =  221 bits (563), Expect = 2e-55
 Identities = 118/160 (73%), Positives = 125/160 (78%)
 Frame = +1

Query: 139 MVVVAQKKASKTRKIILKEDVAELGKKGQLLDVKAGYYRNYLHPLGKAQIVTSLLLXXXX 318
           ++VVAQKKA K RKIILKEDV+ELGKKGQLLDVKAGYYRNYLHPLG AQI T   L    
Sbjct: 2   VMVVAQKKAKKLRKIILKEDVSELGKKGQLLDVKAGYYRNYLHPLGMAQIATPQFLKEMR 61

Query: 319 XXXXXXXXXXXXXXXXXQQLATIFETVNTFKVKRKGGKGKLIFGSVTAQDLVDIIKAQLQ 498
                            QQLA IFETV  FKVKRKGGKGK IFG+VTAQDLVDIIKAQL 
Sbjct: 62  LEEERIEAEKKRVKEEAQQLALIFETVGAFKVKRKGGKGKQIFGTVTAQDLVDIIKAQLA 121

Query: 499 RDVDKRDVSLPEIRETGEYIAELKLHPEVTARVKLNVYAN 618
           RDVDKR V+LPEIRETGEYIAELKLHPEVTARV+ NV+AN
Sbjct: 122 RDVDKRIVTLPEIRETGEYIAELKLHPEVTARVRFNVFAN 161


>gb|EYU37024.1| hypothetical protein MIMGU_mgv1a014206mg [Mimulus guttatus]
           gi|604332292|gb|EYU37025.1| hypothetical protein
           MIMGU_mgv1a014206mg [Mimulus guttatus]
           gi|604332293|gb|EYU37026.1| hypothetical protein
           MIMGU_mgv1a014206mg [Mimulus guttatus]
           gi|604332294|gb|EYU37027.1| hypothetical protein
           MIMGU_mgv1a014206mg [Mimulus guttatus]
          Length = 197

 Score =  219 bits (558), Expect = 9e-55
 Identities = 121/177 (68%), Positives = 134/177 (75%), Gaps = 2/177 (1%)
 Frame = +1

Query: 94  KNI--NETTTFSDKRTAMVVVAQKKASKTRKIILKEDVAELGKKGQLLDVKAGYYRNYLH 267
           KNI  ++T+  SD+ + + VVAQKKA K RKIILKEDV  LGKKGQLLDVKAGY+RNYL 
Sbjct: 21  KNIINSDTSKLSDRTSILTVVAQKKAKKVRKIILKEDVNLLGKKGQLLDVKAGYFRNYLL 80

Query: 268 PLGKAQIVTSLLLXXXXXXXXXXXXXXXXXXXXXQQLATIFETVNTFKVKRKGGKGKLIF 447
           P+G AQIVT  L+                      QLA IFETV  FKVKRKGGKGK IF
Sbjct: 81  PMGMAQIVTPGLIKEMKLEDDRIEAEKKRVKDEALQLAQIFETVGAFKVKRKGGKGKQIF 140

Query: 448 GSVTAQDLVDIIKAQLQRDVDKRDVSLPEIRETGEYIAELKLHPEVTARVKLNVYAN 618
           GSVTAQDLVDIIKAQLQRDVDKR VSLPEIRETGEYIAELKLHP+VTARV++ V+AN
Sbjct: 141 GSVTAQDLVDIIKAQLQRDVDKRIVSLPEIRETGEYIAELKLHPDVTARVRVTVFAN 197


>ref|XP_006291875.1| hypothetical protein CARUB_v10018052mg [Capsella rubella]
           gi|565467992|ref|XP_006291876.1| hypothetical protein
           CARUB_v10018052mg [Capsella rubella]
           gi|482560582|gb|EOA24773.1| hypothetical protein
           CARUB_v10018052mg [Capsella rubella]
           gi|482560583|gb|EOA24774.1| hypothetical protein
           CARUB_v10018052mg [Capsella rubella]
          Length = 197

 Score =  219 bits (557), Expect = 1e-54
 Identities = 114/177 (64%), Positives = 133/177 (75%)
 Frame = +1

Query: 88  FGKNINETTTFSDKRTAMVVVAQKKASKTRKIILKEDVAELGKKGQLLDVKAGYYRNYLH 267
           F    NET   S++R    VV+QKKA K R ++LKEDV +LGK+GQLLDVKAG++RN+L 
Sbjct: 21  FSNVANETLKVSERRFNFEVVSQKKAKKLRTVVLKEDVTDLGKQGQLLDVKAGFFRNFLL 80

Query: 268 PLGKAQIVTSLLLXXXXXXXXXXXXXXXXXXXXXQQLATIFETVNTFKVKRKGGKGKLIF 447
           P GKAQ++T LLL                     QQLA +F+TV  FK+KRKGGKGKLIF
Sbjct: 81  PTGKAQLMTPLLLKELKMEDERIEAEKQRVKEEAQQLAMVFQTVGAFKIKRKGGKGKLIF 140

Query: 448 GSVTAQDLVDIIKAQLQRDVDKRDVSLPEIRETGEYIAELKLHPEVTARVKLNVYAN 618
           GSVTAQDLVDIIK+QLQRD+DKR VSLPEIRETGEYIAELKLHP+VTARVK+NV AN
Sbjct: 141 GSVTAQDLVDIIKSQLQRDIDKRLVSLPEIRETGEYIAELKLHPDVTARVKINVVAN 197


>ref|NP_001235742.1| uncharacterized protein LOC100500279 [Glycine max]
           gi|255629919|gb|ACU15311.1| unknown [Glycine max]
          Length = 198

 Score =  219 bits (557), Expect = 1e-54
 Identities = 118/170 (69%), Positives = 129/170 (75%)
 Frame = +1

Query: 109 TTTFSDKRTAMVVVAQKKASKTRKIILKEDVAELGKKGQLLDVKAGYYRNYLHPLGKAQI 288
           TT F +K     V AQKKA K RKIILKEDVA +GK+GQLLDVKAG++RNYL P+GKAQ+
Sbjct: 29  TTQFPNKNVRFSVFAQKKAKKLRKIILKEDVAYVGKQGQLLDVKAGFFRNYLLPMGKAQL 88

Query: 289 VTSLLLXXXXXXXXXXXXXXXXXXXXXQQLATIFETVNTFKVKRKGGKGKLIFGSVTAQD 468
           VT  LL                     QQLA IFETV  FKVKRKGGKGK IFGSVTAQD
Sbjct: 89  VTLQLLKEMKIEEERIEAEKKRVKEEAQQLALIFETVGAFKVKRKGGKGKQIFGSVTAQD 148

Query: 469 LVDIIKAQLQRDVDKRDVSLPEIRETGEYIAELKLHPEVTARVKLNVYAN 618
           LVDIIKAQLQR+VDKR V LPEIRETGEYIAELKLHPEVTARV++NV+AN
Sbjct: 149 LVDIIKAQLQREVDKRIVDLPEIRETGEYIAELKLHPEVTARVRVNVFAN 198


>ref|XP_007132340.1| hypothetical protein PHAVU_011G086500g [Phaseolus vulgaris]
           gi|561005340|gb|ESW04334.1| hypothetical protein
           PHAVU_011G086500g [Phaseolus vulgaris]
          Length = 196

 Score =  218 bits (554), Expect = 3e-54
 Identities = 118/167 (70%), Positives = 128/167 (76%)
 Frame = +1

Query: 118 FSDKRTAMVVVAQKKASKTRKIILKEDVAELGKKGQLLDVKAGYYRNYLHPLGKAQIVTS 297
           F +K     V AQKKA KTRKIILKEDVA++GK+GQLLDVKAG+YRN+L PLGKAQ+VT 
Sbjct: 30  FPNKTAHFFVFAQKKAKKTRKIILKEDVADVGKQGQLLDVKAGFYRNFLLPLGKAQLVTP 89

Query: 298 LLLXXXXXXXXXXXXXXXXXXXXXQQLATIFETVNTFKVKRKGGKGKLIFGSVTAQDLVD 477
            LL                     +QLA IFETV  FKVKRKGGKGK IFGSVTAQDLVD
Sbjct: 90  QLLKEMKIEEERIEAEKRRVKEEAEQLALIFETVGPFKVKRKGGKGKQIFGSVTAQDLVD 149

Query: 478 IIKAQLQRDVDKRDVSLPEIRETGEYIAELKLHPEVTARVKLNVYAN 618
           IIKAQLQR++DKR V LPEIRETGEYIAELKLHPEVTARVKLNV AN
Sbjct: 150 IIKAQLQRELDKRIVDLPEIRETGEYIAELKLHPEVTARVKLNVSAN 196


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