BLASTX nr result
ID: Paeonia25_contig00021159
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Paeonia25_contig00021159
(470 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa] 160 6e-43
ref|XP_004295686.1| PREDICTED: uncharacterized mitochondrial pro... 155 8e-42
gb|ACY72569.1| unknown [Oryza sativa Japonica Group] 152 2e-39
gb|ABA95065.1| retrotransposon protein, putative, Ty1-copia subc... 149 2e-38
emb|CAN78447.1| hypothetical protein VITISV_026810 [Vitis vinifera] 143 9e-38
gb|ABA95721.1| retrotransposon protein, putative, Ty1-copia subc... 150 9e-38
dbj|BAB90546.1| putative rice retrotransposon retrofit gag/pol p... 149 1e-37
gb|AAB82754.1| retrofit [Oryza longistaminata] 147 1e-37
gb|ABA95366.1| retrotransposon protein, putative, Ty1-copia subc... 144 1e-37
gb|ABA97652.1| retrotransposon protein, putative, Ty1-copia subc... 146 1e-37
emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera] 148 2e-37
gb|ACV42639.1| gag/pol [Oryza sativa Japonica Group] 147 4e-37
gb|AAN06870.1| Putative gag-pol polyprotein [Oryza sativa Japoni... 143 9e-37
emb|CAN68489.1| hypothetical protein VITISV_037543 [Vitis vinifera] 142 2e-36
emb|CAN67403.1| hypothetical protein VITISV_025614 [Vitis vinifera] 142 2e-36
emb|CAE04319.3| OSJNBb0016D16.10 [Oryza sativa Japonica Group] 145 2e-36
gb|AAL66754.1|AF464738_5 putative copia-like retrotransposon Hop... 141 5e-36
gb|AAX96193.1| retrotransposon protein, putative, Ty1-copia sub-... 140 2e-35
gb|ABA98286.2| retrotransposon protein, putative, Ty1-copia subc... 140 2e-35
gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subc... 140 2e-35
>gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa]
Length = 1384
Score = 160 bits (406), Expect(2) = 6e-43
Identities = 75/131 (57%), Positives = 97/131 (74%)
Frame = +2
Query: 11 VHYFLGIQITRTPSHMVINQEKYILELLQKISFLHSKPLSTPVVSGQKLSIHDGDPLSDA 190
VHYFLGI+ H+ + Q KYI++LL+K S+P TPV+SG+KLS++DG L D
Sbjct: 1100 VHYFLGIETVYNGDHLHLTQHKYIVDLLKKTKLHDSRPYPTPVLSGKKLSVYDGVKLEDP 1159
Query: 191 TQFRQVVGALQYITISRPDISYAVNQVCQFMHSPTTSHWNVVKRILHFLKGSVNHSLVYK 370
+++R +VGALQY+T++RPDI YAVNQVCQFMHSPT HW VKRIL +LK ++NH LVY+
Sbjct: 1160 SEYRSIVGALQYLTLTRPDICYAVNQVCQFMHSPTNVHWVAVKRILRYLKYTLNHGLVYQ 1219
Query: 371 SGSTHLHAYCD 403
GS L AY D
Sbjct: 1220 PGSHKLVAYSD 1230
Score = 39.3 bits (90), Expect(2) = 6e-43
Identities = 15/17 (88%), Positives = 17/17 (100%)
Frame = +1
Query: 406 DADYAGNPDDRHSTGGY 456
DADYAG+PDDRHSTGG+
Sbjct: 1230 DADYAGDPDDRHSTGGF 1246
>ref|XP_004295686.1| PREDICTED: uncharacterized mitochondrial protein AtMg00810-like
[Fragaria vesca subsp. vesca]
Length = 261
Score = 155 bits (391), Expect(2) = 8e-42
Identities = 73/134 (54%), Positives = 95/134 (70%)
Frame = +2
Query: 2 LVHVHYFLGIQITRTPSHMVINQEKYILELLQKISFLHSKPLSTPVVSGQKLSIHDGDPL 181
L +HYFLGI+ T + Q+KYI++LL + L + P +TP +GQKLS+H G L
Sbjct: 7 LGRIHYFLGIEATYDGPSPYLTQKKYIVDLLTRTKMLDANPCATPAATGQKLSLHSGKKL 66
Query: 182 SDATQFRQVVGALQYITISRPDISYAVNQVCQFMHSPTTSHWNVVKRILHFLKGSVNHSL 361
SD T++R VVGALQY+T++RPDISY+VNQVC+FMHSPTT HW VK IL +LK S+NH L
Sbjct: 67 SDPTEYRSVVGALQYLTLTRPDISYSVNQVCKFMHSPTTIHWIAVKPILRYLKFSLNHGL 126
Query: 362 VYKSGSTHLHAYCD 403
Y+ S + AY D
Sbjct: 127 KYQPSSLFISAYFD 140
Score = 41.2 bits (95), Expect(2) = 8e-42
Identities = 16/21 (76%), Positives = 19/21 (90%)
Frame = +1
Query: 406 DADYAGNPDDRHSTGGYAIYL 468
DADYAG+PD+R STGGY +YL
Sbjct: 140 DADYAGDPDNRQSTGGYCVYL 160
>gb|ACY72569.1| unknown [Oryza sativa Japonica Group]
Length = 1436
Score = 152 bits (384), Expect(2) = 2e-39
Identities = 68/134 (50%), Positives = 104/134 (77%), Gaps = 3/134 (2%)
Frame = +2
Query: 11 VHYFLGIQITRTPSHMVINQEKYILELLQKISFLHSKPLSTPVVSGQKLSIHDGDPL--S 184
+HYFLGI++T+ P+ +V+ QEKY +LL++++ + KP+STP+ +KL++++G PL +
Sbjct: 1154 LHYFLGIEVTKVPNGIVLTQEKYANDLLKRVNMSNCKPVSTPLSVSEKLTLYEGSPLGPN 1213
Query: 185 DATQFRQVVGALQYITISRPDISYAVNQVCQFMHSPTTSHWNVVKRILHFLKGSVNHSL- 361
DATQ+R +VGALQY+T++RPDI+Y+VN+VCQF+H+PTT HW VKRIL +L + L
Sbjct: 1214 DATQYRSIVGALQYLTLTRPDIAYSVNKVCQFLHAPTTDHWTAVKRILRYLNQCTSLGLN 1273
Query: 362 VYKSGSTHLHAYCD 403
++KS ST +H Y D
Sbjct: 1274 IHKSASTLVHGYSD 1287
Score = 35.8 bits (81), Expect(2) = 2e-39
Identities = 14/21 (66%), Positives = 19/21 (90%)
Frame = +1
Query: 406 DADYAGNPDDRHSTGGYAIYL 468
DAD+AG+ DDR STGG+A++L
Sbjct: 1287 DADWAGSVDDRKSTGGFAVFL 1307
>gb|ABA95065.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 825
Score = 149 bits (376), Expect(2) = 2e-38
Identities = 67/134 (50%), Positives = 104/134 (77%), Gaps = 3/134 (2%)
Frame = +2
Query: 11 VHYFLGIQITRTPSHMVINQEKYILELLQKISFLHSKPLSTPVVSGQKLSIHDGDPL--S 184
+HYFLGI++T+ + +++ QEKY +LL++++ + KP+STP+ +KL++++G PL +
Sbjct: 644 LHYFLGIEVTKVSNGILLTQEKYANDLLKRVNMSNCKPVSTPLSVSEKLTLYEGSPLGPN 703
Query: 185 DATQFRQVVGALQYITISRPDISYAVNQVCQFMHSPTTSHWNVVKRILHFLKGSVNHSL- 361
DATQ+R +VGALQY+T++RPDI+Y+VN+VCQF+H+PTT HW VVKRIL +L + L
Sbjct: 704 DATQYRSIVGALQYLTLTRPDIAYSVNKVCQFLHAPTTDHWTVVKRILRYLNQCTSLRLN 763
Query: 362 VYKSGSTHLHAYCD 403
++KS ST +H Y D
Sbjct: 764 IHKSASTLVHGYSD 777
Score = 35.4 bits (80), Expect(2) = 2e-38
Identities = 14/21 (66%), Positives = 19/21 (90%)
Frame = +1
Query: 406 DADYAGNPDDRHSTGGYAIYL 468
DAD+AG+ DDR STGG+A++L
Sbjct: 777 DADWAGSIDDRKSTGGFAVFL 797
>emb|CAN78447.1| hypothetical protein VITISV_026810 [Vitis vinifera]
Length = 1171
Score = 143 bits (361), Expect(2) = 9e-38
Identities = 64/129 (49%), Positives = 88/129 (68%)
Frame = +2
Query: 17 YFLGIQITRTPSHMVINQEKYILELLQKISFLHSKPLSTPVVSGQKLSIHDGDPLSDATQ 196
YFLG+++ R+ + + Q KYI +LL + +KPL++ V+ KLS +G+ LSD +
Sbjct: 988 YFLGVEVDRSSQGLHLXQTKYICDLLDRTHMAGAKPLASXXVASTKLSSTNGELLSDPST 1047
Query: 197 FRQVVGALQYITISRPDISYAVNQVCQFMHSPTTSHWNVVKRILHFLKGSVNHSLVYKSG 376
+R ++GALQY TI+ PDISYAVNQ+CQ+MH P T HW +KR+L +LKGSVNH L Y
Sbjct: 1048 YRHIIGALQYCTITXPDISYAVNQLCQYMHQPRTPHWQAMKRVLRYLKGSVNHGLFYTPS 1107
Query: 377 STHLHAYCD 403
LH YCD
Sbjct: 1108 PLQLHTYCD 1116
Score = 39.3 bits (90), Expect(2) = 9e-38
Identities = 14/22 (63%), Positives = 18/22 (81%)
Frame = +1
Query: 403 CDADYAGNPDDRHSTGGYAIYL 468
CD+D+AGNPDDR T GY ++L
Sbjct: 1115 CDSDWAGNPDDRRYTSGYGVFL 1136
>gb|ABA95721.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 900
Score = 150 bits (379), Expect(2) = 9e-38
Identities = 69/134 (51%), Positives = 104/134 (77%), Gaps = 3/134 (2%)
Frame = +2
Query: 11 VHYFLGIQITRTPSHMVINQEKYILELLQKISFLHSKPLSTPVVSGQKLSIHDGDPL--S 184
+HYFLGI++ RTP ++++QE+Y ELL++++ KP+STP+ + +KLS+ GD L S
Sbjct: 610 LHYFLGIEVKRTPQTLLLSQERYTTELLERVNMTSCKPVSTPLSTAEKLSVEIGDELGPS 669
Query: 185 DATQFRQVVGALQYITISRPDISYAVNQVCQFMHSPTTSHWNVVKRILHFLKGSVNHSL- 361
D TQ+R +VGALQY+T++RPDISY+VN+VCQF+ +PTT+HW+ VKRIL +LKG+++ L
Sbjct: 670 DVTQYRSIVGALQYLTLTRPDISYSVNKVCQFLQTPTTAHWSAVKRILRYLKGTLDLGLK 729
Query: 362 VYKSGSTHLHAYCD 403
+ KS S + A+ D
Sbjct: 730 IVKSSSNLVSAFSD 743
Score = 32.3 bits (72), Expect(2) = 9e-38
Identities = 13/18 (72%), Positives = 16/18 (88%)
Frame = +1
Query: 406 DADYAGNPDDRHSTGGYA 459
DAD+AG+ DDR STGG+A
Sbjct: 743 DADWAGSVDDRRSTGGFA 760
>dbj|BAB90546.1| putative rice retrotransposon retrofit gag/pol polyprotein [Oryza
sativa Japonica Group]
Length = 1448
Score = 149 bits (375), Expect(2) = 1e-37
Identities = 67/134 (50%), Positives = 104/134 (77%), Gaps = 3/134 (2%)
Frame = +2
Query: 11 VHYFLGIQITRTPSHMVINQEKYILELLQKISFLHSKPLSTPVVSGQKLSIHDGDPL--S 184
+HYFLGI++T+ + +++ QEKY ++L++++ + KP+STP+ +KL++++G PL +
Sbjct: 1166 LHYFLGIEVTKVSNGVILTQEKYANDMLKRVNMSNCKPVSTPLSVSEKLTLYEGSPLGPN 1225
Query: 185 DATQFRQVVGALQYITISRPDISYAVNQVCQFMHSPTTSHWNVVKRILHFLKGSVNHSL- 361
DATQ+R +VGALQY+T++RPDI+Y+VN+VCQF+H+PTTSHW VKRIL +L + L
Sbjct: 1226 DATQYRSIVGALQYLTLTRPDIAYSVNKVCQFLHAPTTSHWIAVKRILRYLNQCTSLGLH 1285
Query: 362 VYKSGSTHLHAYCD 403
V+KS ST +H Y D
Sbjct: 1286 VHKSASTLVHGYSD 1299
Score = 33.5 bits (75), Expect(2) = 1e-37
Identities = 14/21 (66%), Positives = 18/21 (85%)
Frame = +1
Query: 406 DADYAGNPDDRHSTGGYAIYL 468
DAD AG+ DDR STGG+A++L
Sbjct: 1299 DADGAGSIDDRKSTGGFAVFL 1319
>gb|AAB82754.1| retrofit [Oryza longistaminata]
Length = 1445
Score = 147 bits (370), Expect(2) = 1e-37
Identities = 66/134 (49%), Positives = 103/134 (76%), Gaps = 3/134 (2%)
Frame = +2
Query: 11 VHYFLGIQITRTPSHMVINQEKYILELLQKISFLHSKPLSTPVVSGQKLSIHDGDPL--S 184
+HYFLGI++T+ + +++ QEKY +LL++++ + KP+STP+ +KL++++G PL +
Sbjct: 1163 LHYFLGIEVTKVSNGVILTQEKYANDLLKRVNMSNCKPVSTPLSVSEKLTLYEGSPLGPN 1222
Query: 185 DATQFRQVVGALQYITISRPDISYAVNQVCQFMHSPTTSHWNVVKRILHFLKGSVNHSL- 361
DA Q+R +VGALQY+T++RPDI+Y+VN+VCQF+H+PTTSHW VKRIL +L + L
Sbjct: 1223 DAIQYRSIVGALQYLTLTRPDIAYSVNKVCQFLHAPTTSHWIAVKRILRYLNQCTSLGLH 1282
Query: 362 VYKSGSTHLHAYCD 403
++KS ST +H Y D
Sbjct: 1283 IHKSASTLVHGYSD 1296
Score = 35.4 bits (80), Expect(2) = 1e-37
Identities = 14/21 (66%), Positives = 19/21 (90%)
Frame = +1
Query: 406 DADYAGNPDDRHSTGGYAIYL 468
DAD+AG+ DDR STGG+A++L
Sbjct: 1296 DADWAGSIDDRKSTGGFAVFL 1316
>gb|ABA95366.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 552
Score = 144 bits (364), Expect(2) = 1e-37
Identities = 67/137 (48%), Positives = 100/137 (72%), Gaps = 3/137 (2%)
Frame = +2
Query: 2 LVHVHYFLGIQITRTPSHMVINQEKYILELLQKISFLHSKPLSTPVVSGQKLSIHDGDPL 181
L +HYFLGI++ +T +++ QEKY ++L+++ KP+STP+++ +KL +H+G L
Sbjct: 266 LEELHYFLGIEVNKTSDGIMLTQEKYASDILRRVGMQDCKPVSTPLLASEKLLVHEGTLL 325
Query: 182 S--DATQFRQVVGALQYITISRPDISYAVNQVCQFMHSPTTSHWNVVKRILHFLKGSVNH 355
D TQ+R +VGAL Y+T++RPDIS++VN+VCQF+HSPTT HW VVKRIL +LK +VN
Sbjct: 326 GQKDTTQYRSIVGALPYLTLTRPDISFSVNKVCQFLHSPTTVHWTVVKRILRYLKYTVNC 385
Query: 356 SL-VYKSGSTHLHAYCD 403
L + KS S + +CD
Sbjct: 386 GLRISKSSSLLVSGFCD 402
Score = 37.7 bits (86), Expect(2) = 1e-37
Identities = 15/22 (68%), Positives = 19/22 (86%)
Frame = +1
Query: 403 CDADYAGNPDDRHSTGGYAIYL 468
CDAD+AG DDR STGG+A++L
Sbjct: 401 CDADWAGCLDDRRSTGGFAVFL 422
>gb|ABA97652.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1145
Score = 146 bits (369), Expect(2) = 1e-37
Identities = 67/137 (48%), Positives = 103/137 (75%), Gaps = 3/137 (2%)
Frame = +2
Query: 2 LVHVHYFLGIQITRTPSHMVINQEKYILELLQKISFLHSKPLSTPVVSGQKLSIHDGDPL 181
L +HYFLGI++++ + +V+ Q+KY +LL+K+ ++ KP++TP+ +KLS+H+G L
Sbjct: 978 LGELHYFLGIEVSKVHNGIVLTQDKYATDLLKKVGMMNCKPVTTPMSVSEKLSVHEGSLL 1037
Query: 182 --SDATQFRQVVGALQYITISRPDISYAVNQVCQFMHSPTTSHWNVVKRILHFLKGSVNH 355
+DATQFR +VGALQY+T++RPDI+++VN+VCQF+H+PTT HW VKRIL +LK
Sbjct: 1038 GPNDATQFRSIVGALQYLTLTRPDIAFSVNKVCQFLHTPTTVHWAAVKRILRYLKSCTKM 1097
Query: 356 SL-VYKSGSTHLHAYCD 403
L ++KSGST + + D
Sbjct: 1098 GLNIHKSGSTLVSGFSD 1114
Score = 35.4 bits (80), Expect(2) = 1e-37
Identities = 14/21 (66%), Positives = 19/21 (90%)
Frame = +1
Query: 406 DADYAGNPDDRHSTGGYAIYL 468
DAD+AG+ DDR STGG+AI++
Sbjct: 1114 DADWAGSIDDRRSTGGFAIFI 1134
>emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera]
Length = 1455
Score = 148 bits (374), Expect(2) = 2e-37
Identities = 69/135 (51%), Positives = 97/135 (71%), Gaps = 1/135 (0%)
Frame = +2
Query: 2 LVHVHYFLGIQITRTPSHMVINQEKYILELLQKISFLHSKPLSTPVVSGQKLSIHDGDPL 181
L VHYFLGIQ++ T + + ++Q KYI +LLQK +H KP TP+ +G KL + DGDP+
Sbjct: 1160 LGEVHYFLGIQVSHTNNGLHLSQTKYIRDLLQKTKMVHCKPARTPLPTGLKLRVGDGDPV 1219
Query: 182 SDATQFRQVVGALQYITISRPDISYAVNQVCQFMHSPTTSHWNVVKRILHFLKGSVNHSL 361
D +R VGALQY+TI+RP++S++VN+VCQFM +PT HW VVKRIL +L+G++ H L
Sbjct: 1220 EDLHGYRSTVGALQYVTITRPELSFSVNKVCQFMQNPTEEHWKVVKRILRYLQGTLQHGL 1279
Query: 362 -VYKSGSTHLHAYCD 403
+ KS + L +CD
Sbjct: 1280 HLKKSSNLDLIGFCD 1294
Score = 32.7 bits (73), Expect(2) = 2e-37
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +1
Query: 403 CDADYAGNPDDRHSTGGYAIYL 468
CDAD+A + DDR ST G+ ++L
Sbjct: 1293 CDADWASDLDDRRSTSGHCVFL 1314
>gb|ACV42639.1| gag/pol [Oryza sativa Japonica Group]
Length = 1448
Score = 147 bits (370), Expect(2) = 4e-37
Identities = 66/134 (49%), Positives = 103/134 (76%), Gaps = 3/134 (2%)
Frame = +2
Query: 11 VHYFLGIQITRTPSHMVINQEKYILELLQKISFLHSKPLSTPVVSGQKLSIHDGDPL--S 184
+HYFLGI++T+ + +++ QEKY ++L++++ + P+STP+ +KL++++G PL +
Sbjct: 1166 LHYFLGIEVTKVSNGVILTQEKYANDMLKRVNMSNCTPVSTPLSVSEKLTLYEGSPLGPN 1225
Query: 185 DATQFRQVVGALQYITISRPDISYAVNQVCQFMHSPTTSHWNVVKRILHFLKGSVNHSL- 361
DATQ+R +VGALQY+T++RPDI+Y+VN+VCQF+H+PTTSHW VKRIL +L + L
Sbjct: 1226 DATQYRSIVGALQYLTLTRPDIAYSVNKVCQFLHAPTTSHWIAVKRILRYLNQCTSPGLH 1285
Query: 362 VYKSGSTHLHAYCD 403
V+KS ST +H Y D
Sbjct: 1286 VHKSASTLVHGYSD 1299
Score = 33.5 bits (75), Expect(2) = 4e-37
Identities = 14/21 (66%), Positives = 18/21 (85%)
Frame = +1
Query: 406 DADYAGNPDDRHSTGGYAIYL 468
DAD AG+ DDR STGG+A++L
Sbjct: 1299 DADGAGSIDDRKSTGGFAVFL 1319
>gb|AAN06870.1| Putative gag-pol polyprotein [Oryza sativa Japonica Group]
gi|108706314|gb|ABF94109.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1247
Score = 143 bits (361), Expect(2) = 9e-37
Identities = 68/134 (50%), Positives = 100/134 (74%), Gaps = 3/134 (2%)
Frame = +2
Query: 11 VHYFLGIQITRTPSHMVINQEKYILELLQKISFLHSKPLSTPVVSGQKLSIHDGDPL--S 184
+HYFLGI++T+ +V+ Q+KY+ +LL++++ KP+STP+ + +KLSI++GDPL +
Sbjct: 965 LHYFLGIEVTKVSGGIVLTQDKYVNDLLRRVNMFDCKPVSTPLSTSEKLSINEGDPLGPN 1024
Query: 185 DATQFRQVVGALQYITISRPDISYAVNQVCQFMHSPTTSHWNVVKRILHFLKGSVNHSL- 361
DAT +R VVGALQY+T++RPDI++ VN+VCQF+H+PTT HW VKRIL +LK L
Sbjct: 1025 DATHYRSVVGALQYLTLTRPDIAFPVNKVCQFLHAPTTHHWAAVKRILRYLKQCTRLGLK 1084
Query: 362 VYKSGSTHLHAYCD 403
+ KS S + AY D
Sbjct: 1085 LSKSRSMLVSAYSD 1098
Score = 35.8 bits (81), Expect(2) = 9e-37
Identities = 14/21 (66%), Positives = 19/21 (90%)
Frame = +1
Query: 406 DADYAGNPDDRHSTGGYAIYL 468
DAD+AG+ DDR STGG+A++L
Sbjct: 1098 DADWAGSLDDRRSTGGFAVFL 1118
>emb|CAN68489.1| hypothetical protein VITISV_037543 [Vitis vinifera]
Length = 1449
Score = 142 bits (358), Expect(2) = 2e-36
Identities = 68/135 (50%), Positives = 99/135 (73%), Gaps = 1/135 (0%)
Frame = +2
Query: 2 LVHVHYFLGIQITRTPSHMVINQEKYILELLQKISFLHSKPLSTPVVSGQKLSIHDGDPL 181
L +V+YFLGI++ R+ + ++Q KY +LL + + L SKP +TP + GQ LS DG+P
Sbjct: 1077 LGYVNYFLGIEVVRSGTMFHLSQHKYTQDLLSRTAMLDSKPATTPGLLGQTLSHLDGEPF 1136
Query: 182 SDATQFRQVVGALQYITISRPDISYAVNQVCQFMHSPTTSHWNVVKRILHFLKGSVNHSL 361
SDAT +R VGALQY+T++RPDIS+AVN+ CQFM +PTT+HW VKRIL +LKG++++ +
Sbjct: 1137 SDATLYRSTVGALQYLTLTRPDISFAVNKACQFMATPTTTHWLAVKRILRYLKGTLSYGI 1196
Query: 362 -VYKSGSTHLHAYCD 403
+ +S S +H Y D
Sbjct: 1197 QMQQSTSLDIHGYTD 1211
Score = 36.2 bits (82), Expect(2) = 2e-36
Identities = 15/21 (71%), Positives = 17/21 (80%)
Frame = +1
Query: 406 DADYAGNPDDRHSTGGYAIYL 468
DAD+A PDDR STGGY I+L
Sbjct: 1211 DADWASCPDDRRSTGGYGIFL 1231
>emb|CAN67403.1| hypothetical protein VITISV_025614 [Vitis vinifera]
Length = 1271
Score = 142 bits (358), Expect(2) = 2e-36
Identities = 68/135 (50%), Positives = 99/135 (73%), Gaps = 1/135 (0%)
Frame = +2
Query: 2 LVHVHYFLGIQITRTPSHMVINQEKYILELLQKISFLHSKPLSTPVVSGQKLSIHDGDPL 181
L +V+YFLGI++ R+ + ++Q KY +LL + + L SKP +TP + GQ LS DG+P
Sbjct: 935 LGYVNYFLGIEVVRSGTMFHLSQHKYTQDLLSRTAMLDSKPATTPGLLGQTLSHLDGEPF 994
Query: 182 SDATQFRQVVGALQYITISRPDISYAVNQVCQFMHSPTTSHWNVVKRILHFLKGSVNHSL 361
SDAT +R VGALQY+T++RPDIS+AVN+ CQFM +PTT+HW VKRIL +LKG++++ +
Sbjct: 995 SDATLYRSTVGALQYLTLTRPDISFAVNKACQFMATPTTTHWLAVKRILRYLKGTLSYGI 1054
Query: 362 -VYKSGSTHLHAYCD 403
+ +S S +H Y D
Sbjct: 1055 QMQQSTSLDIHGYTD 1069
Score = 36.2 bits (82), Expect(2) = 2e-36
Identities = 15/21 (71%), Positives = 17/21 (80%)
Frame = +1
Query: 406 DADYAGNPDDRHSTGGYAIYL 468
DAD+A PDDR STGGY I+L
Sbjct: 1069 DADWASCPDDRRSTGGYGIFL 1089
>emb|CAE04319.3| OSJNBb0016D16.10 [Oryza sativa Japonica Group]
Length = 950
Score = 145 bits (366), Expect(2) = 2e-36
Identities = 65/132 (49%), Positives = 102/132 (77%), Gaps = 3/132 (2%)
Frame = +2
Query: 11 VHYFLGIQITRTPSHMVINQEKYILELLQKISFLHSKPLSTPVVSGQKLSIHDGDPL--S 184
+HYFLGI++T+ + +++ QEKY +LL++++ + KP+STP+ +KL++++G PL +
Sbjct: 231 LHYFLGIEVTKVSNGIILTQEKYANDLLKRVNMSNCKPVSTPLSVSEKLTLYEGSPLGPN 290
Query: 185 DATQFRQVVGALQYITISRPDISYAVNQVCQFMHSPTTSHWNVVKRILHFLKGSVNHSL- 361
DATQ+R +VGALQY+T++RPDI+Y+VN+VCQF+H+PTT HW VKRIL +L + L
Sbjct: 291 DATQYRSIVGALQYLTLTRPDIAYSVNKVCQFLHAPTTRHWTGVKRILRYLNQCTSLGLN 350
Query: 362 VYKSGSTHLHAY 397
++KS ST +H Y
Sbjct: 351 IHKSASTLVHGY 362
Score = 32.7 bits (73), Expect(2) = 2e-36
Identities = 13/21 (61%), Positives = 19/21 (90%)
Frame = +1
Query: 406 DADYAGNPDDRHSTGGYAIYL 468
+AD+AG+ DDR STGG+AI++
Sbjct: 364 NADWAGSIDDRKSTGGFAIFV 384
>gb|AAL66754.1|AF464738_5 putative copia-like retrotransposon Hopscotch polyprotein [Zea mays]
Length = 1313
Score = 141 bits (355), Expect(2) = 5e-36
Identities = 64/134 (47%), Positives = 99/134 (73%), Gaps = 3/134 (2%)
Frame = +2
Query: 11 VHYFLGIQITRTPSHMVINQEKYILELLQKISFLHSKPLSTPVVSGQKLSIHDGDPLS-- 184
++YFLGI++ + +++ Q+KY +LL+K+ KP+STP+ + +KLSIH+G PL
Sbjct: 1031 LNYFLGIEVNKVRDGIILTQDKYASDLLKKVGMSDCKPISTPLSTSEKLSIHEGSPLGEK 1090
Query: 185 DATQFRQVVGALQYITISRPDISYAVNQVCQFMHSPTTSHWNVVKRILHFLKGSVNHSL- 361
D TQ+R +VGALQY+T++RPDI+++VN+VCQF+H+PTT HW VKRIL ++K N L
Sbjct: 1091 DITQYRSIVGALQYLTLTRPDIAFSVNKVCQFLHAPTTLHWAAVKRILRYIKQCTNLGLH 1150
Query: 362 VYKSGSTHLHAYCD 403
+++S ST + A+ D
Sbjct: 1151 IHRSDSTLVSAFSD 1164
Score = 35.8 bits (81), Expect(2) = 5e-36
Identities = 14/21 (66%), Positives = 19/21 (90%)
Frame = +1
Query: 406 DADYAGNPDDRHSTGGYAIYL 468
DAD+AG+ DDR STGG+A++L
Sbjct: 1164 DADWAGSVDDRKSTGGFAVFL 1184
>gb|AAX96193.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group]
Length = 1621
Score = 140 bits (353), Expect(2) = 2e-35
Identities = 66/137 (48%), Positives = 100/137 (72%), Gaps = 3/137 (2%)
Frame = +2
Query: 2 LVHVHYFLGIQITRTPSHMVINQEKYILELLQKISFLHSKPLSTPVVSGQKLSIHDGDPL 181
L +HYFLGI++++ + +V+NQ+KY +LL+K+ + KP +TP+ +KLS+H+G L
Sbjct: 890 LGELHYFLGIEVSKVQNGIVLNQDKYANDLLKKVGMIDCKPANTPLSVSEKLSLHEGSLL 949
Query: 182 S--DATQFRQVVGALQYITISRPDISYAVNQVCQFMHSPTTSHWNVVKRILHFLKGSVNH 355
DA+ +R VVGALQY+T++RPDI+++VN+VCQF+H+PTT HW VKRIL +LK
Sbjct: 950 GPEDASHYRSVVGALQYLTLTRPDIAFSVNKVCQFLHAPTTVHWIAVKRILRYLKQCTRL 1009
Query: 356 SL-VYKSGSTHLHAYCD 403
L ++KSGST + + D
Sbjct: 1010 GLEIHKSGSTLVSGFSD 1026
Score = 34.7 bits (78), Expect(2) = 2e-35
Identities = 15/21 (71%), Positives = 18/21 (85%)
Frame = +1
Query: 406 DADYAGNPDDRHSTGGYAIYL 468
DAD+AG DDR STGG+AI+L
Sbjct: 1026 DADWAGCLDDRRSTGGFAIFL 1046
>gb|ABA98286.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1478
Score = 140 bits (353), Expect(2) = 2e-35
Identities = 66/137 (48%), Positives = 100/137 (72%), Gaps = 3/137 (2%)
Frame = +2
Query: 2 LVHVHYFLGIQITRTPSHMVINQEKYILELLQKISFLHSKPLSTPVVSGQKLSIHDGDPL 181
L +HYFLGI++++ + +V+NQ+KY +LL+K+ + KP +TP+ +KLS+H+G L
Sbjct: 1161 LGELHYFLGIEVSKVQNGIVLNQDKYANDLLKKVGMIDCKPANTPLSVSEKLSLHEGSLL 1220
Query: 182 S--DATQFRQVVGALQYITISRPDISYAVNQVCQFMHSPTTSHWNVVKRILHFLKGSVNH 355
DA+ +R VVGALQY+T++RPDI+++VN+VCQF+H+PTT HW VKRIL +LK
Sbjct: 1221 GPEDASHYRSVVGALQYLTLTRPDIAFSVNKVCQFLHAPTTVHWIAVKRILRYLKQCTRL 1280
Query: 356 SL-VYKSGSTHLHAYCD 403
L ++KSGST + + D
Sbjct: 1281 GLEIHKSGSTLVSGFSD 1297
Score = 34.7 bits (78), Expect(2) = 2e-35
Identities = 15/21 (71%), Positives = 18/21 (85%)
Frame = +1
Query: 406 DADYAGNPDDRHSTGGYAIYL 468
DAD+AG DDR STGG+AI+L
Sbjct: 1297 DADWAGCLDDRRSTGGFAIFL 1317
>gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1460
Score = 140 bits (353), Expect(2) = 2e-35
Identities = 66/137 (48%), Positives = 100/137 (72%), Gaps = 3/137 (2%)
Frame = +2
Query: 2 LVHVHYFLGIQITRTPSHMVINQEKYILELLQKISFLHSKPLSTPVVSGQKLSIHDGDPL 181
L +HYFLGI++++ + +V+NQ+KY +LL+K+ + KP +TP+ +KLS+H+G L
Sbjct: 1168 LGELHYFLGIEVSKVQNGIVLNQDKYANDLLKKVGMIDCKPANTPLSVSEKLSLHEGSLL 1227
Query: 182 S--DATQFRQVVGALQYITISRPDISYAVNQVCQFMHSPTTSHWNVVKRILHFLKGSVNH 355
DA+ +R VVGALQY+T++RPDI+++VN+VCQF+H+PTT HW VKRIL +LK
Sbjct: 1228 GPEDASHYRSVVGALQYLTLTRPDIAFSVNKVCQFLHAPTTVHWIAVKRILRYLKQCTRL 1287
Query: 356 SL-VYKSGSTHLHAYCD 403
L ++KSGST + + D
Sbjct: 1288 GLEIHKSGSTLVSGFSD 1304
Score = 34.7 bits (78), Expect(2) = 2e-35
Identities = 15/21 (71%), Positives = 18/21 (85%)
Frame = +1
Query: 406 DADYAGNPDDRHSTGGYAIYL 468
DAD+AG DDR STGG+AI+L
Sbjct: 1304 DADWAGCLDDRRSTGGFAIFL 1324