BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia25_contig00020751
         (505 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXB51154.1| DNA-directed RNA polymerase III subunit RPC9 [Mor...   170   2e-40
ref|XP_006489453.1| PREDICTED: DNA-directed RNA polymerase III s...   168   6e-40
ref|XP_002263648.1| PREDICTED: DNA-directed RNA polymerase III s...   164   9e-39
ref|XP_006420026.1| hypothetical protein CICLE_v10006087mg [Citr...   164   1e-38
gb|AFK37258.1| unknown [Lotus japonicus]                              159   5e-37
ref|XP_007034858.1| DNA-directed RNA polymerase III subunit RPC9...   158   7e-37
ref|XP_002306270.1| hypothetical protein POPTR_0005s06860g [Popu...   156   3e-36
gb|AFK40316.1| unknown [Lotus japonicus]                              154   9e-36
ref|XP_007163393.1| hypothetical protein PHAVU_001G230900g [Phas...   154   1e-35
emb|CAN72759.1| hypothetical protein VITISV_004802 [Vitis vinifera]   153   3e-35
gb|AFK42923.1| unknown [Medicago truncatula]                          148   9e-34
ref|XP_003552972.1| PREDICTED: DNA-directed RNA polymerase III s...   145   7e-33
ref|XP_006590267.1| PREDICTED: uncharacterized protein LOC100526...   142   4e-32
ref|NP_001238744.1| uncharacterized protein LOC100526847 [Glycin...   142   4e-32
ref|XP_004145392.1| PREDICTED: DNA-directed RNA polymerase III s...   140   1e-31
ref|NP_201100.1| RNA polymerase II, Rpb4, core protein [Arabidop...   140   1e-31
ref|XP_006281277.1| hypothetical protein CARUB_v10027325mg [Caps...   137   1e-30
ref|XP_002525535.1| conserved hypothetical protein [Ricinus comm...   137   2e-30
dbj|BAB10864.1| unnamed protein product [Arabidopsis thaliana]        136   3e-30
ref|XP_006295190.1| hypothetical protein CARUB_v10024270mg [Caps...   135   5e-30

>gb|EXB51154.1| DNA-directed RNA polymerase III subunit RPC9 [Morus notabilis]
          Length = 163

 Score =  170 bits (431), Expect = 2e-40
 Identities = 87/140 (62%), Positives = 109/140 (77%)
 Frame = -2

Query: 444 MKIENANGGILTNFEVLNFLRARGASTDPTRVIAPIAPSEFKVYDYLMESAARDQTKECI 265
           MKI  AN G L NFEVLNFL+++GAS DPTRV+A +APSE+KVYDYL+E+AA DQTKE +
Sbjct: 1   MKILEANAGALANFEVLNFLKSKGASKDPTRVLADVAPSEYKVYDYLVETAACDQTKENV 60

Query: 264 AEFMEKSKKYDLAKAELLNIINLRAASDVEINMIVESCEERMNEDQVTELAEMVAEVLPP 85
            EF+EK KKYDLAKAE+LNIIN+RA++ VEI +IVE CE+R+ +D V EL + VAEVLPP
Sbjct: 61  NEFLEKCKKYDLAKAEVLNIINIRASTAVEIYLIVEDCEKRLGDD-VDELVKTVAEVLPP 119

Query: 84  LPAKPDDGEQMEENEDPDQD 25
            P +P   E   E ++   D
Sbjct: 120 APTEPASEEVNNEADEKTAD 139


>ref|XP_006489453.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC9-like
           isoform X1 [Citrus sinensis]
           gi|568872598|ref|XP_006489454.1| PREDICTED: DNA-directed
           RNA polymerase III subunit RPC9-like isoform X2 [Citrus
           sinensis]
          Length = 165

 Score =  168 bits (426), Expect = 6e-40
 Identities = 84/147 (57%), Positives = 111/147 (75%)
 Frame = -2

Query: 444 MKIENANGGILTNFEVLNFLRARGASTDPTRVIAPIAPSEFKVYDYLMESAARDQTKECI 265
           MKI  AN G LTNFEV +FLR +GAS DPTRV+ P+ PSEFKVYDYL+ESAA +QT+  I
Sbjct: 1   MKILEANAGPLTNFEVFDFLRCKGASKDPTRVLVPVTPSEFKVYDYLVESAACNQTRNII 60

Query: 264 AEFMEKSKKYDLAKAELLNIINLRAASDVEINMIVESCEERMNEDQVTELAEMVAEVLPP 85
            EF+EKSKK+ LAKAE+LNIIN+R +S VE++ I+E C+ R  E+++ EL ++V EVLPP
Sbjct: 61  NEFLEKSKKFKLAKAEILNIINIRPSSLVEVDSIIEQCDTRFQEEELQELVDLVIEVLPP 120

Query: 84  LPAKPDDGEQMEENEDPDQDGDGEQME 4
           LP +P+  E++ E    D  G  E+M+
Sbjct: 121 LPNQPNAAEEVNE----DVQGATERMD 143


>ref|XP_002263648.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC9 [Vitis
           vinifera] gi|296087853|emb|CBI35109.3| unnamed protein
           product [Vitis vinifera]
          Length = 156

 Score =  164 bits (416), Expect = 9e-39
 Identities = 87/142 (61%), Positives = 109/142 (76%)
 Frame = -2

Query: 444 MKIENANGGILTNFEVLNFLRARGASTDPTRVIAPIAPSEFKVYDYLMESAARDQTKECI 265
           MKI+ AN G LTNFEVL+FLR+RGA+ DPTRVIAPIA SEFKVYDYL+ESAA +QT+E I
Sbjct: 1   MKIKKANAGALTNFEVLDFLRSRGAAKDPTRVIAPIAASEFKVYDYLVESAACNQTRESI 60

Query: 264 AEFMEKSKKYDLAKAELLNIINLRAASDVEINMIVESCEERMNEDQVTELAEMVAEVLPP 85
            E +EK KKYDLAKAE+LNIIN+R AS VEI+ I+E  E+RM E  + +L EMV  VLPP
Sbjct: 61  NELLEKCKKYDLAKAEILNIINIRPASPVEIDPIIEESEKRMGEG-IEDLIEMVITVLPP 119

Query: 84  LPAKPDDGEQMEENEDPDQDGD 19
            P + +  E++   ++   DG+
Sbjct: 120 PPNQMNTEEEVVAGDEEIADGE 141


>ref|XP_006420026.1| hypothetical protein CICLE_v10006087mg [Citrus clementina]
           gi|567853814|ref|XP_006420027.1| hypothetical protein
           CICLE_v10006087mg [Citrus clementina]
           gi|557521899|gb|ESR33266.1| hypothetical protein
           CICLE_v10006087mg [Citrus clementina]
           gi|557521900|gb|ESR33267.1| hypothetical protein
           CICLE_v10006087mg [Citrus clementina]
          Length = 163

 Score =  164 bits (415), Expect = 1e-38
 Identities = 81/146 (55%), Positives = 110/146 (75%), Gaps = 3/146 (2%)
 Frame = -2

Query: 444 MKIENANGGILTNFEVLNFLRARGASTDPTRVIAPIAPSEFKVYDYLMESAARDQTKECI 265
           MKI   N G LTNFEV +FLR++GAS DPTRV+ P+ PSEFKVYDYL+ESAA +QT+  I
Sbjct: 1   MKILEVNAGPLTNFEVFDFLRSKGASKDPTRVLVPVTPSEFKVYDYLVESAACNQTRNII 60

Query: 264 AEFMEKSKKYDLAKAELLNIINLRAASDVEINMIVESCEERMNEDQVTELAEMVAEVLPP 85
            EF+EKSKK+ LAKAE+LNIIN+R +S VE++ I+E C+ R  E+++ EL ++V EVLPP
Sbjct: 61  NEFLEKSKKFKLAKAEILNIINIRPSSLVEVDSIIEQCDTRFQEEELQELVDLVVEVLPP 120

Query: 84  LPAKPDDGEQMEEN---EDPDQDGDG 16
           L  +P+  E++ E+       +DG+G
Sbjct: 121 LSNQPNAAEEVNEDVQGATERKDGEG 146


>gb|AFK37258.1| unknown [Lotus japonicus]
          Length = 162

 Score =  159 bits (401), Expect = 5e-37
 Identities = 86/160 (53%), Positives = 110/160 (68%), Gaps = 13/160 (8%)
 Frame = -2

Query: 444 MKIENANGGILTNFEVLNFLRARGASTDPTRVIAPIAPSEFKVYDYLMESAARDQTKECI 265
           MKI  AN G LTNFEVL+FLR +GAS DPTRVIA +A SE+KVYDYL+ +AA +QT+E I
Sbjct: 1   MKILEANAGALTNFEVLDFLRGKGASKDPTRVIAKVAQSEYKVYDYLVNTAASNQTRESI 60

Query: 264 AEFMEKSKKYDLAKAELLNIINLRAASDVEINMIVESCEERMNEDQVTELAEMVAEVLPP 85
            EFM   KK+DLAKAE+LNIIN+R A+ VE+  I+E CE R  +++VTE+ E+V + LP 
Sbjct: 61  NEFMASVKKHDLAKAEVLNIINIRPAAAVEMFPIIEECESRFPDEEVTEIVELVKKTLPA 120

Query: 84  LPAKPDDGEQMEENED-------------PDQDGDGEQME 4
            PAK +  E  E NE+              DQ+  GEQM+
Sbjct: 121 PPAKKNVVENPEGNEETATLEHENDTKMSEDQNEGGEQMD 160


>ref|XP_007034858.1| DNA-directed RNA polymerase III subunit RPC9 [Theobroma cacao]
           gi|508713887|gb|EOY05784.1| DNA-directed RNA polymerase
           III subunit RPC9 [Theobroma cacao]
          Length = 245

 Score =  158 bits (400), Expect = 7e-37
 Identities = 92/170 (54%), Positives = 114/170 (67%), Gaps = 22/170 (12%)
 Frame = -2

Query: 444 MKIENANGGILTNFEVLNFLRARGASTDPTRVIAPIAPSEFKVYDYLMESAARDQTKECI 265
           MKI+ AN G LTNFEVL+FLR+RGAS DPTRVI PIAPSEFKVYDYL+ESAA +QTKE I
Sbjct: 76  MKIKEANAGALTNFEVLDFLRSRGASKDPTRVIVPIAPSEFKVYDYLVESAACNQTKEHI 135

Query: 264 AEFMEKSKKYDLAKAELLNIINLRAASDVEINMIVESCEERMNEDQVTELAEMVAEVLPP 85
            +F+E+ K Y LAKAE+LNIINLR ++ VEI+ I+E  E+R  + Q+ EL  +V EVLP 
Sbjct: 136 NDFLERCKNYKLAKAEVLNIINLRPSALVEIDPIIEQSEKRFGK-QLEELVNLVVEVLPE 194

Query: 84  LPAKP-------------------DDGEQMEENEDPD---QDGDGEQMEE 1
            P +                    D+GE+   N D D   Q  DGE+ME+
Sbjct: 195 PPTQKNAEQGNSEDKEETIDRKDMDEGERETTNGDEDQAEQTEDGEKMED 244


>ref|XP_002306270.1| hypothetical protein POPTR_0005s06860g [Populus trichocarpa]
           gi|222855719|gb|EEE93266.1| hypothetical protein
           POPTR_0005s06860g [Populus trichocarpa]
          Length = 159

 Score =  156 bits (394), Expect = 3e-36
 Identities = 81/145 (55%), Positives = 106/145 (73%)
 Frame = -2

Query: 444 MKIENANGGILTNFEVLNFLRARGASTDPTRVIAPIAPSEFKVYDYLMESAARDQTKECI 265
           MKI+N N G LTNFEVL+FLR+RGAS D +RV+AP+A SE+KVYDYL+E+ A + T+E I
Sbjct: 1   MKIKNPNAGALTNFEVLDFLRSRGASRDVSRVLAPVAASEYKVYDYLVETPACNLTREKI 60

Query: 264 AEFMEKSKKYDLAKAELLNIINLRAASDVEINMIVESCEERMNEDQVTELAEMVAEVLPP 85
            EF+E+ KKYDLAKAELLNIIN+R +  VEI  I+E  + R     + EL E+V EVLPP
Sbjct: 61  NEFLERCKKYDLAKAELLNIINIRPSQTVEIYTIIEEMDSRFEMPIIEELVELVEEVLPP 120

Query: 84  LPAKPDDGEQMEENEDPDQDGDGEQ 10
            P +P      +ENE  ++ G+GE+
Sbjct: 121 PPGQPKAEGGTDENE--EETGEGEE 143


>gb|AFK40316.1| unknown [Lotus japonicus]
          Length = 162

 Score =  154 bits (390), Expect = 9e-36
 Identities = 84/160 (52%), Positives = 108/160 (67%), Gaps = 13/160 (8%)
 Frame = -2

Query: 444 MKIENANGGILTNFEVLNFLRARGASTDPTRVIAPIAPSEFKVYDYLMESAARDQTKECI 265
           MKI  AN G LTNFEVL+FLR +GAS DPTRVIA +A SE+KVYDYL+ +AA +QT+E I
Sbjct: 1   MKILEANAGALTNFEVLDFLRGKGASKDPTRVIAKVAQSEYKVYDYLVNTAASNQTRESI 60

Query: 264 AEFMEKSKKYDLAKAELLNIINLRAASDVEINMIVESCEERMNEDQVTELAEMVAEVLPP 85
            EFM   KK+DLAKAE+LNIIN+  A+ VE+  I+E CE R  +++VTE+ E+  + LP 
Sbjct: 61  NEFMASVKKHDLAKAEVLNIINITPAAAVEMFPIIEECEPRFPDEEVTEIVELAKKTLPA 120

Query: 84  LPAKPDDGEQMEENED-------------PDQDGDGEQME 4
            PAK +  E  E NE+              DQ+  GEQM+
Sbjct: 121 PPAKKNVVENPEGNEETATLEHENDTKMSEDQNEGGEQMD 160


>ref|XP_007163393.1| hypothetical protein PHAVU_001G230900g [Phaseolus vulgaris]
           gi|561036857|gb|ESW35387.1| hypothetical protein
           PHAVU_001G230900g [Phaseolus vulgaris]
          Length = 154

 Score =  154 bits (389), Expect = 1e-35
 Identities = 78/148 (52%), Positives = 105/148 (70%)
 Frame = -2

Query: 444 MKIENANGGILTNFEVLNFLRARGASTDPTRVIAPIAPSEFKVYDYLMESAARDQTKECI 265
           MKI  AN G LTNFEVL+FLRA+GAS DPTRVIA +  SE+KVYDYL+++AA DQT+E I
Sbjct: 1   MKILEANAGALTNFEVLDFLRAKGASKDPTRVIAKVEQSEYKVYDYLVDTAASDQTRESI 60

Query: 264 AEFMEKSKKYDLAKAELLNIINLRAASDVEINMIVESCEERMNEDQVTELAEMVAEVLPP 85
            EF+   K++DLAKAE+LNI+N R  S+VEI  I+ESCE R  +++VTE+ E+V + LPP
Sbjct: 61  NEFLTCIKRHDLAKAEVLNILNTRPTSEVEIFPIIESCEGRFPDEEVTEIVELVTKTLPP 120

Query: 84  LPAKPDDGEQMEENEDPDQDGDGEQMEE 1
            P    +    ++ E      + E++ E
Sbjct: 121 PPEMKQEEITKDDEETATLKNEKEEISE 148


>emb|CAN72759.1| hypothetical protein VITISV_004802 [Vitis vinifera]
          Length = 388

 Score =  153 bits (386), Expect = 3e-35
 Identities = 82/130 (63%), Positives = 101/130 (77%)
 Frame = -2

Query: 441 KIENANGGILTNFEVLNFLRARGASTDPTRVIAPIAPSEFKVYDYLMESAARDQTKECIA 262
           K + AN G LTNFEVL+FLR+RGA+ D TRVIAPIA SEFKVYDYL+ESAA +QT+E I 
Sbjct: 23  KQKKANAGALTNFEVLDFLRSRGAAKDXTRVIAPIAASEFKVYDYLVESAACNQTRESIN 82

Query: 261 EFMEKSKKYDLAKAELLNIINLRAASDVEINMIVESCEERMNEDQVTELAEMVAEVLPPL 82
           E +EK KKYDLAKAE+LNIIN+R AS VEI+ I+E  E+RM E  + +L EMV  VLPP 
Sbjct: 83  ELLEKCKKYDLAKAEILNIINIRPASPVEIDPIIEESEKRMGEG-IEDLIEMVITVLPPP 141

Query: 81  PAKPDDGEQM 52
           P + +  E++
Sbjct: 142 PNQMNTEEEV 151


>gb|AFK42923.1| unknown [Medicago truncatula]
          Length = 170

 Score =  148 bits (373), Expect = 9e-34
 Identities = 77/161 (47%), Positives = 106/161 (65%), Gaps = 10/161 (6%)
 Frame = -2

Query: 456 VFLAMKIENANGGILTNFEVLNFLRARGASTDPTRVIAPIAPSEFKVYDYLMESAARDQT 277
           + L MKI   N G LTNFEVL+FLRA+GAS DP+RV+A +A SE+KVYDYL+++ A  QT
Sbjct: 8   LLLEMKILEENAGALTNFEVLDFLRAKGASKDPSRVLAKVAMSEYKVYDYLVKTPAGSQT 67

Query: 276 KECIAEFMEKSKKYDLAKAELLNIINLRAASDVEINMIVESCEERMNEDQVTELAEMVAE 97
           +E + E+    K++DL++AE+LN++N+R AS+VEI  I+E CEER  +++VTE+ E V  
Sbjct: 68  RESVKEYFTAIKQHDLSEAEVLNVLNIRPASEVEIYHIIEDCEERFPDEEVTEIVEKVGN 127

Query: 96  VLPPLPAKPDDGE----------QMEENEDPDQDGDGEQME 4
            LP  P K    E          Q  +    DQ  DGEQM+
Sbjct: 128 TLPAPPDKATPEEITKGDEETETQKHDEISQDQTEDGEQMD 168


>ref|XP_003552972.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC9-like
           [Glycine max]
          Length = 161

 Score =  145 bits (365), Expect = 7e-33
 Identities = 80/158 (50%), Positives = 109/158 (68%), Gaps = 12/158 (7%)
 Frame = -2

Query: 444 MKIENANGGILTNFEVLNFLRARGASTDPTRVIAPIAPSEFKVYDYLMESAARDQTKECI 265
           MKI   N G LTNFEVL+FLRA+GAS DPTRVIA +A SE+KVYDYL+++AA  QT+E I
Sbjct: 1   MKILECNAGALTNFEVLDFLRAKGASKDPTRVIAKVAQSEYKVYDYLVDTAASVQTRESI 60

Query: 264 AEFMEKSKKYDLAKAELLNIINLRAASDVEINMIVESCEERMNEDQVTELAEMVAEVLP- 88
            EF+   K++DLAKAE+LNI+N+  A++VE+  I+E C+ER  ++ V E+ E+V + LP 
Sbjct: 61  NEFLTSVKQHDLAKAEVLNILNIGPAAEVELYPIIEDCDERFGDEGVLEIVELVKKTLPL 120

Query: 87  PLPAKPDDGEQMEE------NE-----DPDQDGDGEQM 7
           PL  K ++  +++E      NE       DQ   GEQM
Sbjct: 121 PLNMKQEEITKVDEETATLKNEKGNQISQDQSEGGEQM 158


>ref|XP_006590267.1| PREDICTED: uncharacterized protein LOC100526847 isoform X1 [Glycine
           max]
          Length = 161

 Score =  142 bits (359), Expect = 4e-32
 Identities = 79/159 (49%), Positives = 111/159 (69%), Gaps = 12/159 (7%)
 Frame = -2

Query: 444 MKIENANGGILTNFEVLNFLRARGASTDPTRVIAPIAPSEFKVYDYLMESAARDQTKECI 265
           MKI   N G LTNFEVL+FLRA+GAS DPTRVIA ++ SE+KVYDYL+++AA  QT+E I
Sbjct: 1   MKILEGNAGALTNFEVLDFLRAKGASKDPTRVIAKVSQSEYKVYDYLVDTAASVQTRESI 60

Query: 264 AEFMEKSKKYDLAKAELLNIINLRAASDVEINMIVESCEERMNEDQVTELAEMVAEVLP- 88
            EF+   K++DLAKAE+LNI+N+  A++VE+  I+E  +ER  ++ VTE+ E+V + LP 
Sbjct: 61  NEFLRSVKQHDLAKAEVLNILNIGPAAEVELYPILEESDERFGDEGVTEIVELVKKTLPL 120

Query: 87  PLPAKPDDGEQMEE------NED-----PDQDGDGEQME 4
           PL  K ++  + +E      NE       DQ+ DGE+M+
Sbjct: 121 PLNMKKEEITKGDEETATLKNEKGNKIRQDQNEDGEEMD 159


>ref|NP_001238744.1| uncharacterized protein LOC100526847 [Glycine max]
           gi|255630978|gb|ACU15853.1| unknown [Glycine max]
          Length = 161

 Score =  142 bits (359), Expect = 4e-32
 Identities = 79/159 (49%), Positives = 111/159 (69%), Gaps = 12/159 (7%)
 Frame = -2

Query: 444 MKIENANGGILTNFEVLNFLRARGASTDPTRVIAPIAPSEFKVYDYLMESAARDQTKECI 265
           MKI   N G LTNFEVL+FLRA+GAS DPTRVIA ++ SE+KVYDYL+++AA  QT+E I
Sbjct: 1   MKILEGNAGALTNFEVLDFLRAKGASKDPTRVIAKVSQSEYKVYDYLVDTAASVQTRESI 60

Query: 264 AEFMEKSKKYDLAKAELLNIINLRAASDVEINMIVESCEERMNEDQVTELAEMVAEVLP- 88
            EF+   K++DLAKAE+LNI+N+  A++VE+  I+E  +ER  ++ VTE+ E+V + LP 
Sbjct: 61  NEFLRSVKQHDLAKAEVLNILNIGPAAEVELYPILEESDERFGDEGVTEIVELVKKALPL 120

Query: 87  PLPAKPDDGEQMEE------NED-----PDQDGDGEQME 4
           PL  K ++  + +E      NE       DQ+ DGE+M+
Sbjct: 121 PLNMKKEEITKGDEETATLKNEKGNKIRQDQNEDGEEMD 159


>ref|XP_004145392.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc9-like
           [Cucumis sativus] gi|449523065|ref|XP_004168545.1|
           PREDICTED: DNA-directed RNA polymerase III subunit
           rpc9-like [Cucumis sativus]
          Length = 160

 Score =  140 bits (354), Expect = 1e-31
 Identities = 74/154 (48%), Positives = 104/154 (67%), Gaps = 9/154 (5%)
 Frame = -2

Query: 444 MKIENANGGILTNFEVLNFLRARGASTDPTRVIAPIAPSEFKVYDYLMESAARDQTKECI 265
           MKI  AN G LTNFEVL+FLR++GA+ DPTRV+A + PSE+KV+DYL +++A +QT+E I
Sbjct: 1   MKILEANAGPLTNFEVLDFLRSKGAAKDPTRVLAKVLPSEYKVFDYLNQTSACNQTREAI 60

Query: 264 AEFMEKSKKYDLAKAELLNIINLRAASDVEINMIVESCEERMNE---DQVTELAEMVAEV 94
             F EKSK+YDLAKAE+LNIINLR  + VE+  ++E+C+ RM E   +++ E+  MV  V
Sbjct: 61  INFAEKSKEYDLAKAEILNIINLRPTTPVELFPVIENCDARMGEGATERMEEIGLMVEHV 120

Query: 93  L------PPLPAKPDDGEQMEENEDPDQDGDGEQ 10
                  P     P +G + E  E  +  GD ++
Sbjct: 121 FPTPQNEPTFEVTPKEGNEAEAMEVQEGAGDADE 154


>ref|NP_201100.1| RNA polymerase II, Rpb4, core protein [Arabidopsis thaliana]
           gi|334188590|ref|NP_001190602.1| RNA polymerase II,
           Rpb4, core protein [Arabidopsis thaliana]
           gi|32815911|gb|AAP88340.1| At5g62950 [Arabidopsis
           thaliana] gi|110743157|dbj|BAE99470.1| hypothetical
           protein [Arabidopsis thaliana]
           gi|332010294|gb|AED97677.1| RNA polymerase II, Rpb4,
           core protein [Arabidopsis thaliana]
           gi|332010296|gb|AED97679.1| RNA polymerase II, Rpb4,
           core protein [Arabidopsis thaliana]
          Length = 139

 Score =  140 bits (354), Expect = 1e-31
 Identities = 78/139 (56%), Positives = 99/139 (71%), Gaps = 4/139 (2%)
 Frame = -2

Query: 444 MKIENANGGILTNFEVLNFLRARGASTDPTRVIAPIAPSEFKVYDYLMESAARDQTKECI 265
           MKI  AN G LTNFEVL+FL +RGAS D TRVIAPIA SE+KVYDYL+E+AA  QT+E I
Sbjct: 1   MKIVKANAGALTNFEVLDFLNSRGASKDTTRVIAPIARSEYKVYDYLVETAASTQTRESI 60

Query: 264 AEFMEKSKKYDLAKAELLNIINLRAASDVEINMIVESCEERMNEDQVTELAEMVAEVLPP 85
            +F +K K + LAKAE+LNIINLR +S VE+  I+E+ ++R  E     + E+V ++LPP
Sbjct: 61  NKFADKCKDFKLAKAEILNIINLRPSSIVELLPIIENLDDR--EIDTDGILELVKDLLPP 118

Query: 84  LPA----KPDDGEQMEENE 40
           LP     K DD E+ E  E
Sbjct: 119 LPTTASPKDDDEEETENGE 137


>ref|XP_006281277.1| hypothetical protein CARUB_v10027325mg [Capsella rubella]
           gi|482549981|gb|EOA14175.1| hypothetical protein
           CARUB_v10027325mg [Capsella rubella]
          Length = 145

 Score =  137 bits (346), Expect = 1e-30
 Identities = 73/148 (49%), Positives = 103/148 (69%), Gaps = 3/148 (2%)
 Frame = -2

Query: 444 MKIENANGGILTNFEVLNFLRARGASTDPTRVIAPIAPSEFKVYDYLMESAARDQTKECI 265
           MKI  AN G LTNFEVL+FL +RGAS D TRVIAPIA SE+KVYDYL+E+AA  QT+E +
Sbjct: 1   MKIVKANAGALTNFEVLDFLNSRGASKDTTRVIAPIAISEYKVYDYLLETAASTQTRESV 60

Query: 264 AEFMEKSKKYDLAKAELLNIINLRAASDVEINMIVESCEERMNEDQVTE---LAEMVAEV 94
            +F +K K + +AKAE+LNIINLR +S V++  I+E  ++   E +  +   + E+V ++
Sbjct: 61  NKFADKCKDFKVAKAEILNIINLRPSSKVDLAPIIEMPDKEKGETRTIDTDGILELVKDL 120

Query: 93  LPPLPAKPDDGEQMEENEDPDQDGDGEQ 10
           LPPLP      ++  E+ D ++  +GEQ
Sbjct: 121 LPPLPTT----DETSEDNDEEETENGEQ 144


>ref|XP_002525535.1| conserved hypothetical protein [Ricinus communis]
           gi|223535214|gb|EEF36893.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 138

 Score =  137 bits (344), Expect = 2e-30
 Identities = 72/133 (54%), Positives = 94/133 (70%)
 Frame = -2

Query: 435 ENANGGILTNFEVLNFLRARGASTDPTRVIAPIAPSEFKVYDYLMESAARDQTKECIAEF 256
           +N N G LTNFEVL+FL+ARGA  D +RVIAP+APSE+KVYDYLME+ A  QT+E I EF
Sbjct: 4   KNPNAGALTNFEVLDFLKARGAGKDSSRVIAPVAPSEYKVYDYLMETPACRQTREQINEF 63

Query: 255 MEKSKKYDLAKAELLNIINLRAASDVEINMIVESCEERMNEDQVTELAEMVAEVLPPLPA 76
           MEK K Y LAKAE+LNIIN+     VE++ I+E  E R   D + E+ ++V ++ PP P 
Sbjct: 64  MEKCKAYKLAKAEILNIINIVPRELVELDPIIEKSEVRFG-DLLEEVKDLVCDIFPPPPG 122

Query: 75  KPDDGEQMEENED 37
           +P   E  EE+ +
Sbjct: 123 EPAAEEGGEEDHE 135


>dbj|BAB10864.1| unnamed protein product [Arabidopsis thaliana]
          Length = 166

 Score =  136 bits (342), Expect = 3e-30
 Identities = 75/134 (55%), Positives = 96/134 (71%), Gaps = 4/134 (2%)
 Frame = -2

Query: 429 ANGGILTNFEVLNFLRARGASTDPTRVIAPIAPSEFKVYDYLMESAARDQTKECIAEFME 250
           AN G LTNFEVL+FL +RGAS D TRVIAPIA SE+KVYDYL+E+AA  QT+E I +F +
Sbjct: 33  ANAGALTNFEVLDFLNSRGASKDTTRVIAPIARSEYKVYDYLVETAASTQTRESINKFAD 92

Query: 249 KSKKYDLAKAELLNIINLRAASDVEINMIVESCEERMNEDQVTELAEMVAEVLPPLPA-- 76
           K K + LAKAE+LNIINLR +S VE+  I+E+ ++R  E     + E+V ++LPPLP   
Sbjct: 93  KCKDFKLAKAEILNIINLRPSSIVELLPIIENLDDR--EIDTDGILELVKDLLPPLPTTA 150

Query: 75  --KPDDGEQMEENE 40
             K DD E+ E  E
Sbjct: 151 SPKDDDEEETENGE 164


>ref|XP_006295190.1| hypothetical protein CARUB_v10024270mg [Capsella rubella]
           gi|565475100|ref|XP_006295191.1| hypothetical protein
           CARUB_v10024270mg [Capsella rubella]
           gi|482563898|gb|EOA28088.1| hypothetical protein
           CARUB_v10024270mg [Capsella rubella]
           gi|482563899|gb|EOA28089.1| hypothetical protein
           CARUB_v10024270mg [Capsella rubella]
          Length = 144

 Score =  135 bits (341), Expect = 5e-30
 Identities = 72/137 (52%), Positives = 98/137 (71%), Gaps = 2/137 (1%)
 Frame = -2

Query: 444 MKIENANGGILTNFEVLNFLRARGASTDPTRVIAPIAPSEFKVYDYLMESAARDQTKECI 265
           MKI  AN G LTNFEVL+FL +RGAS D TRVIAPIA SE+KVYDYL+E+AA  QT+E +
Sbjct: 1   MKIVKANAGALTNFEVLDFLNSRGASKDTTRVIAPIAISEYKVYDYLVETAASTQTRESV 60

Query: 264 AEFMEKSKKYDLAKAELLNIINLRAASDVEINMIVESCEERMNEDQVTE--LAEMVAEVL 91
            +F +K K + +AKAE+LNIINLR +S VE+  I+E+ ++   E ++    + E+V ++L
Sbjct: 61  NKFADKCKDFKVAKAEILNIINLRPSSAVELAPIIETPKKGEKERKIDTDGILELVKDLL 120

Query: 90  PPLPAKPDDGEQMEENE 40
           PPLP   +  E  +E E
Sbjct: 121 PPLPTTDETPEDNDEEE 137