BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia25_contig00020618
         (1343 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI40152.3| unnamed protein product [Vitis vinifera]              494   e-137
ref|XP_002265533.1| PREDICTED: DNA-directed RNA polymerase E sub...   494   e-137
ref|XP_007011001.1| DNA-directed RNA polymerase E subunit 1, put...   453   e-125
ref|XP_007010999.1| DNA-directed RNA polymerase E subunit 1, put...   453   e-125
ref|XP_002303926.2| hypothetical protein POPTR_0003s19630g [Popu...   451   e-124
ref|XP_004230024.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   447   e-123
ref|XP_007218881.1| hypothetical protein PRUPE_ppa000088mg [Prun...   438   e-120
ref|XP_004308588.1| PREDICTED: DNA-directed RNA polymerase E sub...   435   e-119
gb|AAY89359.1| RNA polymerase IV largest subunit [Solanum lycope...   433   e-119
ref|XP_004155767.1| PREDICTED: DNA-directed RNA polymerase E sub...   433   e-119
ref|XP_006420718.1| hypothetical protein CICLE_v10004129mg [Citr...   431   e-118
ref|XP_006470866.1| PREDICTED: DNA-directed RNA polymerase V sub...   427   e-117
ref|XP_003541591.1| PREDICTED: DNA-directed RNA polymerase V sub...   421   e-115
ref|XP_004140346.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   418   e-114
ref|XP_006598109.1| PREDICTED: DNA-directed RNA polymerase V sub...   417   e-114
gb|EYU38281.1| hypothetical protein MIMGU_mgv1a000048mg [Mimulus...   416   e-114
gb|AAX12374.1| DNA-directed RNA polymerase alpha subunit [Spinac...   416   e-113
ref|XP_004511031.1| PREDICTED: DNA-directed RNA polymerase E sub...   413   e-112
ref|XP_002299207.2| hypothetical protein POPTR_0001s06460g [Popu...   410   e-112
ref|XP_007133762.1| hypothetical protein PHAVU_011G206900g [Phas...   406   e-111

>emb|CBI40152.3| unnamed protein product [Vitis vinifera]
          Length = 1890

 Score =  494 bits (1273), Expect = e-137
 Identities = 259/408 (63%), Positives = 297/408 (72%), Gaps = 4/408 (0%)
 Frame = -2

Query: 1282 KWCDMPCLMFSWQETSDVQLEGVSHILAAKICPVLLETIIKGDPRICTVNIIWTSPDTTT 1103
            K  DMPCL+F WQ   D  LE + HILA KICPVLL+TIIKGD R+CTVNIIW SPDTTT
Sbjct: 1061 KGSDMPCLLFFWQGNRDDNLEQILHILAHKICPVLLQTIIKGDSRVCTVNIIWISPDTTT 1120

Query: 1102 WTRNPSKTRKGELAVDIVLEKAAVKQKGDAWRIVVDSCLPIIHLIDTKRSVPYAITQVQE 923
            W RNP K+RKGELA+DIVLEKAAVKQ+GDAWRIV+D+CLP++HLIDT+RS+PYAI QVQE
Sbjct: 1121 WIRNPCKSRKGELALDIVLEKAAVKQRGDAWRIVLDACLPVLHLIDTRRSIPYAIKQVQE 1180

Query: 922  LLGVSCAFDQAVQRLFASVTMVTKGVLKEHLILLGNSMTCAGTLIGFTVGGYKELSRSLK 743
            LLG+SCAFDQAVQRL  SVTMV KGVLKEHLILL NSMTCAG LIGF  GGYK LSR+L 
Sbjct: 1181 LLGISCAFDQAVQRLSKSVTMVAKGVLKEHLILLANSMTCAGNLIGFNSGGYKALSRALN 1240

Query: 742  VEVPFTEATLFTPRKCFEKAAEKRHIDSLSSIVASCSWGKHVSVGTGSRFEVLWDTNKIG 563
            ++VPFTEATLFTPRKCFEKA+EK H DSLSSIVASCSWGKHV+VGTGSRF+VLWDT +IG
Sbjct: 1241 LQVPFTEATLFTPRKCFEKASEKCHTDSLSSIVASCSWGKHVTVGTGSRFDVLWDTKEIG 1300

Query: 562  SKKEAGIDIYNFLQMV-SVPDKEVADTDCLGADIDYLALEDEIVGEFGMSPEHDSGFGKP 386
              ++ GIDIY+FL +V S    +  DT CLGA+++ L LEDE + E GMSPEH S F KP
Sbjct: 1301 PAQDGGIDIYSFLHLVRSGSYGKEPDTACLGAEVEDLILEDENL-ELGMSPEHSSNFEKP 1359

Query: 385  VFEDSADFQQGFENQMVPGGDTNGSPWDNRIASKNIESSSGGWDVAQN---TTSTPKSNA 215
            VFEDSA+FQ  +EN  VPG                   S G W V QN   T ST K +A
Sbjct: 1360 VFEDSAEFQNTWENH-VPG-------------------SGGDWAVNQNKETTASTLKPSA 1399

Query: 214  WSGWGSDQGDTQDVSTEPSPAWGGKEQENQLPSSQGGWDSANNGGRNK 71
            WS WG+D+   +D  +   P            S   GWD     G +K
Sbjct: 1400 WSSWGTDKVTMKDTFSTREP---------DESSRSAGWDDKGTWGTDK 1438


>ref|XP_002265533.1| PREDICTED: DNA-directed RNA polymerase E subunit 1 [Vitis vinifera]
          Length = 1830

 Score =  494 bits (1273), Expect = e-137
 Identities = 259/408 (63%), Positives = 297/408 (72%), Gaps = 4/408 (0%)
 Frame = -2

Query: 1282 KWCDMPCLMFSWQETSDVQLEGVSHILAAKICPVLLETIIKGDPRICTVNIIWTSPDTTT 1103
            K  DMPCL+F WQ   D  LE + HILA KICPVLL+TIIKGD R+CTVNIIW SPDTTT
Sbjct: 1001 KGSDMPCLLFFWQGNRDDNLEQILHILAHKICPVLLQTIIKGDSRVCTVNIIWISPDTTT 1060

Query: 1102 WTRNPSKTRKGELAVDIVLEKAAVKQKGDAWRIVVDSCLPIIHLIDTKRSVPYAITQVQE 923
            W RNP K+RKGELA+DIVLEKAAVKQ+GDAWRIV+D+CLP++HLIDT+RS+PYAI QVQE
Sbjct: 1061 WIRNPCKSRKGELALDIVLEKAAVKQRGDAWRIVLDACLPVLHLIDTRRSIPYAIKQVQE 1120

Query: 922  LLGVSCAFDQAVQRLFASVTMVTKGVLKEHLILLGNSMTCAGTLIGFTVGGYKELSRSLK 743
            LLG+SCAFDQAVQRL  SVTMV KGVLKEHLILL NSMTCAG LIGF  GGYK LSR+L 
Sbjct: 1121 LLGISCAFDQAVQRLSKSVTMVAKGVLKEHLILLANSMTCAGNLIGFNSGGYKALSRALN 1180

Query: 742  VEVPFTEATLFTPRKCFEKAAEKRHIDSLSSIVASCSWGKHVSVGTGSRFEVLWDTNKIG 563
            ++VPFTEATLFTPRKCFEKA+EK H DSLSSIVASCSWGKHV+VGTGSRF+VLWDT +IG
Sbjct: 1181 LQVPFTEATLFTPRKCFEKASEKCHTDSLSSIVASCSWGKHVTVGTGSRFDVLWDTKEIG 1240

Query: 562  SKKEAGIDIYNFLQMV-SVPDKEVADTDCLGADIDYLALEDEIVGEFGMSPEHDSGFGKP 386
              ++ GIDIY+FL +V S    +  DT CLGA+++ L LEDE + E GMSPEH S F KP
Sbjct: 1241 PAQDGGIDIYSFLHLVRSGSYGKEPDTACLGAEVEDLILEDENL-ELGMSPEHSSNFEKP 1299

Query: 385  VFEDSADFQQGFENQMVPGGDTNGSPWDNRIASKNIESSSGGWDVAQN---TTSTPKSNA 215
            VFEDSA+FQ  +EN  VPG                   S G W V QN   T ST K +A
Sbjct: 1300 VFEDSAEFQNTWENH-VPG-------------------SGGDWAVNQNKETTASTLKPSA 1339

Query: 214  WSGWGSDQGDTQDVSTEPSPAWGGKEQENQLPSSQGGWDSANNGGRNK 71
            WS WG+D+   +D  +   P            S   GWD     G +K
Sbjct: 1340 WSSWGTDKVTMKDTFSTREP---------DESSRSAGWDDKGTWGTDK 1378


>ref|XP_007011001.1| DNA-directed RNA polymerase E subunit 1, putative isoform 3
            [Theobroma cacao] gi|508727914|gb|EOY19811.1|
            DNA-directed RNA polymerase E subunit 1, putative isoform
            3 [Theobroma cacao]
          Length = 1675

 Score =  453 bits (1165), Expect = e-125
 Identities = 228/399 (57%), Positives = 285/399 (71%), Gaps = 13/399 (3%)
 Frame = -2

Query: 1282 KWCDMPCLMFSWQETSDVQLEGVSHILAAKICPVLLETIIKGDPRICTVNIIWTSPDTTT 1103
            KW DM CLMF  + T D  L+     L   I PVLLET+IKGDPRIC+ NIIW SPDTTT
Sbjct: 997  KWLDMSCLMFFCRNTKDDHLDCTLQDLVDIIYPVLLETVIKGDPRICSANIIWVSPDTTT 1056

Query: 1102 WTRNPSKTRKGELAVDIVLEKAAVKQKGDAWRIVVDSCLPIIHLIDTKRSVPYAITQVQE 923
            W R+PSKT+KGELA+D+VLEK+AVKQ GDAWR V+D CLP+I+LIDT+RS+PYAI QVQE
Sbjct: 1057 WIRSPSKTQKGELALDVVLEKSAVKQNGDAWRTVIDCCLPVINLIDTQRSIPYAIKQVQE 1116

Query: 922  LLGVSCAFDQAVQRLFASVTMVTKGVLKEHLILLGNSMTCAGTLIGFTVGGYKELSRSLK 743
            LLG+SCAF+QAVQRL  SV+MV +GVLKEHLILL NSMTCAG LIGF  GGYK LSRSL 
Sbjct: 1117 LLGISCAFEQAVQRLSTSVSMVARGVLKEHLILLANSMTCAGNLIGFNSGGYKALSRSLN 1176

Query: 742  VEVPFTEATLFTPRKCFEKAAEKRHIDSLSSIVASCSWGKHVSVGTGSRFEVLWDTNKIG 563
            ++VPF+EATLFTPRKCFE+AAEK H+DSLSSIVASCSWGKHV+VGTGSRF+VLWD  ++G
Sbjct: 1177 IQVPFSEATLFTPRKCFERAAEKCHVDSLSSIVASCSWGKHVAVGTGSRFDVLWDRKEVG 1236

Query: 562  SKKEAGIDIYNFLQMVSVPDKEVADTDCLGADIDYLALEDEIVGEFGMSPEHDSGFGKPV 383
              +++GID+YNFL M+S      + T CLG ++D L ++ + + E+ +SPEH +G  KPV
Sbjct: 1237 FDQKSGIDVYNFLHMLSSASGPSSTTTCLGEEVDDL-MDVDNMAEWSLSPEHSNGLDKPV 1295

Query: 382  FEDSADFQQGFENQMVPGGDTNGSPWDNRIASKNIES-----SSGGWDVAQNTTSTPKSN 218
            FED+ADF+   + Q        G   D +++S N+ S     +  G   A   TST K +
Sbjct: 1296 FEDAADFENDLDFQPAESSWEKGVSLD-KVSSWNVSSAWNKKAEDGDKFAAALTSTTKQS 1354

Query: 217  AWSGWGSDQGDTQDVSTEPSPA--------WGGKEQENQ 125
             W  WG+ +  TQD +   +          WG  + + Q
Sbjct: 1355 DWCDWGTSKSKTQDAAAAATSTTKKTEWCDWGTSKSKTQ 1393


>ref|XP_007010999.1| DNA-directed RNA polymerase E subunit 1, putative isoform 1
            [Theobroma cacao] gi|590569189|ref|XP_007011000.1|
            DNA-directed RNA polymerase E subunit 1, putative isoform
            1 [Theobroma cacao] gi|508727912|gb|EOY19809.1|
            DNA-directed RNA polymerase E subunit 1, putative isoform
            1 [Theobroma cacao] gi|508727913|gb|EOY19810.1|
            DNA-directed RNA polymerase E subunit 1, putative isoform
            1 [Theobroma cacao]
          Length = 1788

 Score =  453 bits (1165), Expect = e-125
 Identities = 228/399 (57%), Positives = 285/399 (71%), Gaps = 13/399 (3%)
 Frame = -2

Query: 1282 KWCDMPCLMFSWQETSDVQLEGVSHILAAKICPVLLETIIKGDPRICTVNIIWTSPDTTT 1103
            KW DM CLMF  + T D  L+     L   I PVLLET+IKGDPRIC+ NIIW SPDTTT
Sbjct: 997  KWLDMSCLMFFCRNTKDDHLDCTLQDLVDIIYPVLLETVIKGDPRICSANIIWVSPDTTT 1056

Query: 1102 WTRNPSKTRKGELAVDIVLEKAAVKQKGDAWRIVVDSCLPIIHLIDTKRSVPYAITQVQE 923
            W R+PSKT+KGELA+D+VLEK+AVKQ GDAWR V+D CLP+I+LIDT+RS+PYAI QVQE
Sbjct: 1057 WIRSPSKTQKGELALDVVLEKSAVKQNGDAWRTVIDCCLPVINLIDTQRSIPYAIKQVQE 1116

Query: 922  LLGVSCAFDQAVQRLFASVTMVTKGVLKEHLILLGNSMTCAGTLIGFTVGGYKELSRSLK 743
            LLG+SCAF+QAVQRL  SV+MV +GVLKEHLILL NSMTCAG LIGF  GGYK LSRSL 
Sbjct: 1117 LLGISCAFEQAVQRLSTSVSMVARGVLKEHLILLANSMTCAGNLIGFNSGGYKALSRSLN 1176

Query: 742  VEVPFTEATLFTPRKCFEKAAEKRHIDSLSSIVASCSWGKHVSVGTGSRFEVLWDTNKIG 563
            ++VPF+EATLFTPRKCFE+AAEK H+DSLSSIVASCSWGKHV+VGTGSRF+VLWD  ++G
Sbjct: 1177 IQVPFSEATLFTPRKCFERAAEKCHVDSLSSIVASCSWGKHVAVGTGSRFDVLWDRKEVG 1236

Query: 562  SKKEAGIDIYNFLQMVSVPDKEVADTDCLGADIDYLALEDEIVGEFGMSPEHDSGFGKPV 383
              +++GID+YNFL M+S      + T CLG ++D L ++ + + E+ +SPEH +G  KPV
Sbjct: 1237 FDQKSGIDVYNFLHMLSSASGPSSTTTCLGEEVDDL-MDVDNMAEWSLSPEHSNGLDKPV 1295

Query: 382  FEDSADFQQGFENQMVPGGDTNGSPWDNRIASKNIES-----SSGGWDVAQNTTSTPKSN 218
            FED+ADF+   + Q        G   D +++S N+ S     +  G   A   TST K +
Sbjct: 1296 FEDAADFENDLDFQPAESSWEKGVSLD-KVSSWNVSSAWNKKAEDGDKFAAALTSTTKQS 1354

Query: 217  AWSGWGSDQGDTQDVSTEPSPA--------WGGKEQENQ 125
             W  WG+ +  TQD +   +          WG  + + Q
Sbjct: 1355 DWCDWGTSKSKTQDAAAAATSTTKKTEWCDWGTSKSKTQ 1393


>ref|XP_002303926.2| hypothetical protein POPTR_0003s19630g [Populus trichocarpa]
            gi|550343552|gb|EEE78905.2| hypothetical protein
            POPTR_0003s19630g [Populus trichocarpa]
          Length = 1920

 Score =  451 bits (1161), Expect = e-124
 Identities = 239/397 (60%), Positives = 282/397 (71%), Gaps = 1/397 (0%)
 Frame = -2

Query: 1273 DMPCLMFSWQETSDVQLEGVSHILAAKICPVLLETIIKGDPRICTVNIIWTSPDTTTWTR 1094
            + PCLMF WQ   DV LE  S+ILA  ICPVLLETIIKGD RI   NIIW +P+T TW R
Sbjct: 1005 ESPCLMFFWQGADDVHLERTSNILADMICPVLLETIIKGDHRISCANIIWATPETNTWIR 1064

Query: 1093 NPSKTRKGELAVDIVLEKAAVKQKGDAWRIVVDSCLPIIHLIDTKRSVPYAITQVQELLG 914
            NPS+T+KGELA+DIVLEK+ VK+ GDAWRIV+DSCLP++HLI+T RS+PYAI QVQELLG
Sbjct: 1065 NPSRTQKGELALDIVLEKSVVKKSGDAWRIVLDSCLPVLHLINTTRSIPYAIKQVQELLG 1124

Query: 913  VSCAFDQAVQRLFASVTMVTKGVLKEHLILLGNSMTCAGTLIGFTVGGYKELSRSLKVEV 734
            VSCAFD AVQRL  SVTMV KGVLKEHLILLGNSMTCAG+LIGF  GGYK LSRSL ++V
Sbjct: 1125 VSCAFDTAVQRLSKSVTMVAKGVLKEHLILLGNSMTCAGSLIGFYTGGYKTLSRSLDIQV 1184

Query: 733  PFTEATLFTPRKCFEKAAEKRHIDSLSSIVASCSWGKHVSVGTGSRFEVLWDTNKIGSKK 554
            PFTEATLFTPRKCFEKAAEK H DSLSSIVASC+WGKHV+VGTGS F+VLWDT +     
Sbjct: 1185 PFTEATLFTPRKCFEKAAEKCHTDSLSSIVASCAWGKHVTVGTGSHFDVLWDTKEACLNP 1244

Query: 553  EAGIDIYNFLQMV-SVPDKEVADTDCLGADIDYLALEDEIVGEFGMSPEHDSGFGKPVFE 377
            E  +D+Y+FL MV S    E + T CLGA++D L LEDE   ++ +SPEH+S   KP FE
Sbjct: 1245 EGSMDVYSFLNMVRSTAGGEESVTACLGAEVDDLMLEDE---DWNLSPEHNSSSDKPTFE 1301

Query: 376  DSADFQQGFENQMVPGGDTNGSPWDNRIASKNIESSSGGWDVAQNTTSTPKSNAWSGWGS 197
            DSA+FQ    NQ         S W+   + K+   SSG WDV +N  +  K   WS  G 
Sbjct: 1302 DSAEFQDFLGNQPAE------SNWEKISSLKDRSRSSGNWDVDKNDGAV-KEKPWS-LGM 1353

Query: 196  DQGDTQDVSTEPSPAWGGKEQENQLPSSQGGWDSANN 86
            +  +  DV+   S  W          ++   W+S NN
Sbjct: 1354 NTAEANDVA---SSGWDTAAAR----TTNNSWNSENN 1383


>ref|XP_004230024.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase E subunit
            1 [Solanum lycopersicum]
          Length = 1632

 Score =  447 bits (1149), Expect = e-123
 Identities = 236/422 (55%), Positives = 292/422 (69%), Gaps = 21/422 (4%)
 Frame = -2

Query: 1282 KWCDMPCLMFSWQETSDVQLEGVSHILAAKICPVLLETIIKGDPRICTVNIIWTSPDTTT 1103
            K  + PCL FSW + SD  LE VSHILA  ICP+LL+T+IKGDPR+ + NI W SPDT +
Sbjct: 1001 KCLNAPCLRFSWPDASDDHLERVSHILADMICPILLDTVIKGDPRVSSANIAWISPDTMS 1060

Query: 1102 WTRNPSKTRKGELAVDIVLEKAAVKQKGDAWRIVVDSCLPIIHLIDTKRSVPYAITQVQE 923
            W R+PSK+++GELA+DIVLEK AVKQ+GDAWRI++DSCLP+IHLIDT RS+PYAI QVQE
Sbjct: 1061 WIRSPSKSQRGELALDIVLEKEAVKQRGDAWRILMDSCLPVIHLIDTTRSIPYAIKQVQE 1120

Query: 922  LLGVSCAFDQAVQRLFASVTMVTKGVLKEHLILLGNSMTCAGTLIGFTVGGYKELSRSLK 743
            L+G+SCAF+QAV+RL  SVTMVTKGVLK+HL+LL NSMTCAG L+GF  GG K LSRSL 
Sbjct: 1121 LIGISCAFEQAVKRLSTSVTMVTKGVLKDHLVLLANSMTCAGNLVGFNAGGIKALSRSLN 1180

Query: 742  VEVPFTEATLFTPRKCFEKAAEKRHIDSLSSIVASCSWGKHVSVGTGSRFEVLWDTNKIG 563
            V++PFTEATLFTPRKCFE+AAEK H+DSLSSIVASCSWGKHV+VGTGSRFEVL +T  + 
Sbjct: 1181 VQIPFTEATLFTPRKCFERAAEKCHVDSLSSIVASCSWGKHVAVGTGSRFEVLLNTRNVE 1240

Query: 562  SKKEAGIDIYNFLQMV-SVPDKEVADTDCLGADIDYLALEDEIVGEFGMSPEHDSGFGKP 386
                   D+Y+FL +V +   +EV  T CLGA+ID L  EDE +G + +SP  DSG   P
Sbjct: 1241 WNIPDTRDVYSFLHLVRNTSAQEVEGTSCLGAEIDELE-EDEDMGLY-LSPNRDSGSEMP 1298

Query: 385  VFEDSADFQQGFENQMVPGGDTNGSPWDNRIASKNIESSSGGWDVAQNTTS-----TPKS 221
             FED A+F     N+ +  G  +GS W+   AS     S G WD+A  T +       +S
Sbjct: 1299 TFEDRAEFDY---NENLDEGKPSGSAWEK--ASSGSVKSGGSWDMAGKTQNGAEEGVNQS 1353

Query: 220  NAWSGWGS-----DQGDTQDVSTEPSPAW----------GGKEQENQLPSSQGGWDSANN 86
            ++WS WG      +    Q  S E S +W          GG   E +  +S+  W  A N
Sbjct: 1354 DSWSAWGKKVDEPENNRQQSGSGEQSGSWSSWGKKVEKDGGSWDEPKQLNSESSWGKAPN 1413

Query: 85   GG 80
            GG
Sbjct: 1414 GG 1415


>ref|XP_007218881.1| hypothetical protein PRUPE_ppa000088mg [Prunus persica]
            gi|462415343|gb|EMJ20080.1| hypothetical protein
            PRUPE_ppa000088mg [Prunus persica]
          Length = 1855

 Score =  438 bits (1126), Expect = e-120
 Identities = 222/412 (53%), Positives = 278/412 (67%), Gaps = 13/412 (3%)
 Frame = -2

Query: 1282 KWCDMPCLMFSWQETSDVQLEGVSHILAAKICPVLLETIIKGDPRICTVNIIWTSPDTTT 1103
            K  D PCLMF  Q T D++        A  ICPVLLETIIKGDPRI + NIIW  PDTTT
Sbjct: 1009 KRSDSPCLMFFLQATDDLETTTTLQYYADLICPVLLETIIKGDPRIGSANIIWIDPDTTT 1068

Query: 1102 WTRNPSKTRKGELAVDIVLEKAAVKQKGDAWRIVVDSCLPIIHLIDTKRSVPYAITQVQE 923
            W R+P+K++KGE A+DIVLEK+ +KQ GDAWR V+DSCLP++HLIDT+RS+PYAI Q+QE
Sbjct: 1069 WIRSPNKSQKGEWALDIVLEKSVIKQSGDAWRTVLDSCLPVLHLIDTRRSIPYAIKQIQE 1128

Query: 922  LLGVSCAFDQAVQRLFASVTMVTKGVLKEHLILLGNSMTCAGTLIGFTVGGYKELSRSLK 743
            LLGVSCAFDQAVQRL  +VTMV KGVLKEHLILL NSMTCAG  +GF   GYK LSR+L 
Sbjct: 1129 LLGVSCAFDQAVQRLSTAVTMVAKGVLKEHLILLANSMTCAGNFVGFNSSGYKALSRALN 1188

Query: 742  VEVPFTEATLFTPRKCFEKAAEKRHIDSLSSIVASCSWGKHVSVGTGSRFEVLWDTNKIG 563
            ++VPFTEATLFTPRKCFE+AAEK H+DSL+SIVASCSWGKHV+VGTG RF+VLWDT ++ 
Sbjct: 1189 IQVPFTEATLFTPRKCFERAAEKCHMDSLASIVASCSWGKHVAVGTGVRFDVLWDTREVE 1248

Query: 562  SKKEAGIDIYNFLQMVSVPDKEVADTDCLGADIDYLALEDEIVGEFGMSPEHDSGFGKPV 383
              +E G+D++NFL MVS  + E A T  LGA++D L L DE + +   SPE +S F +PV
Sbjct: 1249 LTQEGGLDVFNFLHMVSTANVEEATTGALGAEVDDLMLVDE-MADSSFSPELNSSFDRPV 1307

Query: 382  FEDSADFQQGFENQMVPGGDTNGSPWDNRIASKNIESSSGGWDVAQNTTSTPKSNAWSGW 203
            FED  +F          G     S W+   +     +    W V +N  +    + WS W
Sbjct: 1308 FEDLVEFDDKL------GDLPEKSNWEKDSSFHTDSNGGKDWSVDKNVGTVAVPDVWSSW 1361

Query: 202  GSDQGDTQDVST-------------EPSPAWGGKEQENQLPSSQGGWDSANN 86
            G+++G TQD ++             + S AWG    +    S+ G   ++ N
Sbjct: 1362 GTEKGKTQDSNSAEAQLDSKKSSVLDTSSAWGKNPAKENTTSTWGTTTASEN 1413


>ref|XP_004308588.1| PREDICTED: DNA-directed RNA polymerase E subunit 1-like [Fragaria
            vesca subsp. vesca]
          Length = 1991

 Score =  435 bits (1119), Expect = e-119
 Identities = 222/403 (55%), Positives = 283/403 (70%), Gaps = 16/403 (3%)
 Frame = -2

Query: 1267 PCLMFSWQETSDVQLEGVSHILAAKICPVLLETIIKGDPRICTVNIIWTSPDTTTWTRNP 1088
            PCLMF +Q+ ++ +LE +S +LA  ICPVLL+T+IKGDPRI + NIIW + ++TTW R+P
Sbjct: 1009 PCLMFFYQDFNNSELEAISQMLADFICPVLLKTVIKGDPRISSANIIWINSESTTWIRSP 1068

Query: 1087 SKTRKGELAVDIVLEKAAVKQKGDAWRIVVDSCLPIIHLIDTKRSVPYAITQVQELLGVS 908
            +K+ KGELA+D+VLEK+ VKQ GDAWRI +D CLP++HLIDT+RS+PYAI QVQELLGVS
Sbjct: 1069 NKSLKGELALDVVLEKSVVKQSGDAWRIALDCCLPVLHLIDTRRSIPYAIKQVQELLGVS 1128

Query: 907  CAFDQAVQRLFASVTMVTKGVLKEHLILLGNSMTCAGTLIGFTVGGYKELSRSLKVEVPF 728
            CAFDQAVQRL  +V MV KGVLKEHLILL NSMTCAG  +GF  GGYK LSR+L ++VPF
Sbjct: 1129 CAFDQAVQRLAKAVAMVAKGVLKEHLILLANSMTCAGNFVGFNPGGYKALSRALNIQVPF 1188

Query: 727  TEATLFTPRKCFEKAAEKRHIDSLSSIVASCSWGKHVSVGTGSRFEVLWDTNKIGSKKEA 548
            TEATLFTP+KCFE+AAEK H+DSLSSIVASCSWGKHV+VGTGSRFE+LWDT + G  +  
Sbjct: 1189 TEATLFTPKKCFERAAEKCHMDSLSSIVASCSWGKHVAVGTGSRFEILWDTKEGGLNEVG 1248

Query: 547  GIDIYNFLQMVSVPDKEVADTDCLGADIDYLALEDEIVGEFGMSPEHDSGFGKPVFEDSA 368
            G+D++NFL MV+  + E   T  LG +ID L + D   G+  +SPEH+S   KPVFED  
Sbjct: 1249 GVDVFNFLHMVNAANGEELTTAALGTEIDDL-VPDYENGDVSLSPEHNSSSDKPVFEDIV 1307

Query: 367  DFQQGFENQMVPG---------GDTNGSPW-------DNRIASKNIESSSGGWDVAQNTT 236
            +F   FEN  VPG           T G  W        + I+++    S+  W +     
Sbjct: 1308 EFPDNFEN--VPGKSSWDSIYTASTGGKDWGAVKIGTQDGISAETQADSTSAWGI----- 1360

Query: 235  STPKSNAWSGWGSDQGDTQDVSTEPSPAWGGKEQENQLPSSQG 107
             TP+ +  S WG+ +  T+D  +    AWG K  +   PS+ G
Sbjct: 1361 KTPREDDTSPWGTAKTATEDAPS----AWGTKTVKEDAPSAWG 1399


>gb|AAY89359.1| RNA polymerase IV largest subunit [Solanum lycopersicum]
          Length = 1127

 Score =  433 bits (1114), Expect = e-119
 Identities = 232/422 (54%), Positives = 288/422 (68%), Gaps = 21/422 (4%)
 Frame = -2

Query: 1282 KWCDMPCLMFSWQETSDVQLEGVSHILAAKICPVLLETIIKGDPRICTVNIIWTSPDTTT 1103
            K  + PCL FSW + SD  LE VSHILA  I P+LL+T+IKGDPR+ + NI W SPDT +
Sbjct: 552  KCLNAPCLRFSWPDASDDHLERVSHILADMIXPILLDTVIKGDPRVSSANIAWISPDTMS 611

Query: 1102 WTRNPSKTRKGELAVDIVLEKAAVKQKGDAWRIVVDSCLPIIHLIDTKRSVPYAITQVQE 923
            W R+PSK+++GELA+DIVLEK AVK +GDAWR ++DSCLP+IHLIDT RS+PYAI QVQE
Sbjct: 612  WIRSPSKSQRGELALDIVLEKEAVKXRGDAWRXLMDSCLPVIHLIDTTRSIPYAIKQVQE 671

Query: 922  LLGVSCAFDQAVQRLFASVTMVTKGVLKEHLILLGNSMTCAGTLIGFTVGGYKELSRSLK 743
            L+G+SCAF+QAV RL  SVTMVTKGVLK+HL+LL NSMTCAG L+GF  GG K LSRSL 
Sbjct: 672  LIGISCAFEQAVXRLSTSVTMVTKGVLKDHLVLLANSMTCAGNLVGFNAGGIKALSRSLN 731

Query: 742  VEVPFTEATLFTPRKCFEKAAEKRHIDSLSSIVASCSWGKHVSVGTGSRFEVLWDTNKIG 563
            V++PFTEATLFTPRKCFE+AAEK H+DSLSSIVASCSWGKHV+VGTGSRFEVL +T  + 
Sbjct: 732  VQIPFTEATLFTPRKCFERAAEKCHVDSLSSIVASCSWGKHVAVGTGSRFEVLLNTRNVE 791

Query: 562  SKKEAGIDIYNFLQMV-SVPDKEVADTDCLGADIDYLALEDEIVGEFGMSPEHDSGFGKP 386
                   D+Y+FL +V +   +EV  T CLGA+ID L  EDE +G + +SP  DSG   P
Sbjct: 792  WNIPDTRDVYSFLHLVRNTSAQEVEGTSCLGAEIDELE-EDEDMGLY-LSPNRDSGSEMP 849

Query: 385  VFEDSADFQQGFENQMVPGGDTNGSPWDNRIASKNIESSSGGWDVAQNTTS-----TPKS 221
             FED A+F     N+ +  G  +GS W+   AS     S G WD+A  T +       +S
Sbjct: 850  TFEDRAEFDY---NENLDEGKPSGSAWEE--ASSGSVKSGGSWDMAGKTQNGAEEGVNQS 904

Query: 220  NAWSGWGS-----DQGDTQDVSTEPSPAWG--GKE--------QENQLPSSQGGWDSANN 86
            ++WS WG      +    Q  S E S +W   G+          E +  +S+  W  A N
Sbjct: 905  DSWSSWGKKVDEPENNRQQSGSGEQSGSWSPWGRRWKKMVVLGDEPKQLNSESSWGKAPN 964

Query: 85   GG 80
            GG
Sbjct: 965  GG 966


>ref|XP_004155767.1| PREDICTED: DNA-directed RNA polymerase E subunit 1-like [Cucumis
            sativus]
          Length = 1959

 Score =  433 bits (1113), Expect = e-119
 Identities = 225/432 (52%), Positives = 290/432 (67%), Gaps = 34/432 (7%)
 Frame = -2

Query: 1273 DMPCLMFSWQETSDVQLEGVSHILAAKICPVLLETIIKGDPRICTVNIIWTSPDTTTWTR 1094
            DMPCL+F W +T DV LE  +HILA  + P+L ETIIKGDPRI + ++IW SPD+T+W +
Sbjct: 1000 DMPCLIF-WHQTRDVHLERTAHILADIVFPLLSETIIKGDPRIKSASVIWISPDSTSWQK 1058

Query: 1093 NPSKTRKGELAVDIVLEKAAVKQKGDAWRIVVDSCLPIIHLIDTKRSVPYAITQVQELLG 914
            NPS+ + GELA+D+ LEK+AVKQ GDAWR V+D CLP++HLIDT+RSVPYAI QVQELLG
Sbjct: 1059 NPSRWQDGELALDVCLEKSAVKQNGDAWRNVLDCCLPVLHLIDTRRSVPYAIKQVQELLG 1118

Query: 913  VSCAFDQAVQRLFASVTMVTKGVLKEHLILLGNSMTCAGTLIGFTVGGYKELSRSLKVEV 734
            +SCAFDQ +QRL  SV+MV+KGVL +HLILL NSMTC G +IGF  GGYK LSR+L ++V
Sbjct: 1119 ISCAFDQMIQRLSKSVSMVSKGVLGDHLILLANSMTCTGNMIGFNSGGYKALSRALNIQV 1178

Query: 733  PFTEATLFTPRKCFEKAAEKRHIDSLSSIVASCSWGKHVSVGTGSRFEVLWDTNKIGSKK 554
            PFTEATLFTPRKCFEKAAEK H DSLSSIVASCSWGKHV+VGTGSRF++LWD  ++G K+
Sbjct: 1179 PFTEATLFTPRKCFEKAAEKCHKDSLSSIVASCSWGKHVAVGTGSRFDILWDQKELGCKQ 1238

Query: 553  EAGIDIYNFLQMVSVPDKEVADTDCLGADIDYLALEDEIVGEFGMSPEHDSGFGKPVFED 374
            +  +D+YNFL MV     E   + CLG +I+ + +EDE  GE  +SPE  S   KPVFED
Sbjct: 1239 DDVVDVYNFLHMVRSGKSEEPTSACLGEEIEDIMVEDE-YGELTLSPEPFSTSEKPVFED 1297

Query: 373  SADFQQGFENQMVPGGDTNGSPWDNRIASKNIESSSGGWDVAQN--TTSTPKSNAWSGWG 200
            SA+F+   +N   PG     S W+   +   + +  G W+  +N   T++   N WSGWG
Sbjct: 1298 SAEFEHCLDN--YPG----ESKWEKAPSLGAVSTGGGQWESNENGKATNSSDGNDWSGWG 1351

Query: 199  ----------SDQGDTQDVSTEPSPAWGGKEQEN----------------------QLPS 116
                      + Q +T + + + + +WG K   +                      +   
Sbjct: 1352 RKAEPDVTVTNAQENTSNSAWDTTSSWGNKATNSSNDNDWSNCSTKEVERDSFTSMEKTP 1411

Query: 115  SQGGWDSANNGG 80
              GGWDSA+  G
Sbjct: 1412 KSGGWDSASTWG 1423


>ref|XP_006420718.1| hypothetical protein CICLE_v10004129mg [Citrus clementina]
            gi|557522591|gb|ESR33958.1| hypothetical protein
            CICLE_v10004129mg [Citrus clementina]
          Length = 1867

 Score =  431 bits (1109), Expect = e-118
 Identities = 230/406 (56%), Positives = 278/406 (68%), Gaps = 7/406 (1%)
 Frame = -2

Query: 1282 KWCDMPCLMFSWQETSDVQLEGVSHILAAKICPVLLETIIKGDPRICTVNIIWTSPDTTT 1103
            K  +MPCLMF  +  SD  L+ +S +LA  I PVLLETIIKGDPRIC+ NIIW SPDTT 
Sbjct: 1000 KRSNMPCLMFVLRGASDSYLDKLSGVLANMIYPVLLETIIKGDPRICSANIIWISPDTTA 1059

Query: 1102 WTRNPSKTRKGELAVDIVLEKAAVKQKGDAWRIVVDSCLPIIHLIDTKRSVPYAITQVQE 923
            W RNPSK RKGELA+D+VLEK+ VKQ GDAWR V+DSCLP+ HLIDT+RSVPYAI QVQE
Sbjct: 1060 WIRNPSKNRKGELALDVVLEKSVVKQSGDAWRTVLDSCLPVFHLIDTRRSVPYAIKQVQE 1119

Query: 922  LLGVSCAFDQAVQRLFASVTMVTKGVLKEHLILLGNSMTCAGTLIGFTVGGYKELSRSLK 743
            LLGVSCAF+QAVQRL ASVTMV KGVLKEHLILL NSMTCAG L+GF  GGYK LSRSL 
Sbjct: 1120 LLGVSCAFEQAVQRLSASVTMVAKGVLKEHLILLANSMTCAGDLVGFNSGGYKALSRSLN 1179

Query: 742  VEVPFTEATLFTPRKCFEKAAEKRHIDSLSSIVASCSWGKHVSVGTGSRFEVLWDTNKIG 563
            V+VPFTEATLF PRKCFEKAAEKRH D+LSS+VA+CSWGKHV+VGTGSRF++LW T    
Sbjct: 1180 VQVPFTEATLFMPRKCFEKAAEKRHTDNLSSVVAACSWGKHVAVGTGSRFDLLWQTENEE 1239

Query: 562  SKKEAGIDIYNFLQMV-SVPDKEVADTDCLGADIDYLALEDEIVGEFGMSPEHDSGFGKP 386
              ++ G+D+Y+FL MV S    E  DT CLG ++D   LEDE   ++ +SPEH+    KP
Sbjct: 1240 FNQDDGVDVYDFLHMVRSSTGIEELDTGCLGEEVD--GLEDEF--DWSLSPEHNLCSDKP 1295

Query: 385  VFEDSADFQQGFENQMVPGGDTNGSPWDNRIASKNIESSSGGWDVAQNTTSTPKSNAW-- 212
            +FED  + Q   EN+           WD+    +  +SS   W+    +   P S+ W  
Sbjct: 1296 IFEDLVEDQSWLENKQ------ENENWDSEADCR--KSSEDKWEKLGTSLEKP-SSGWRT 1346

Query: 211  -SGWGSDQGDTQDVSTEPS---PAWGGKEQENQLPSSQGGWDSANN 86
               WG    D  + +  PS     WG +    +  SS   W++  +
Sbjct: 1347 EGAWGKSSDDKLEKAGSPSRKPSGWGTEASWGE--SSSDKWENVGS 1390


>ref|XP_006470866.1| PREDICTED: DNA-directed RNA polymerase V subunit 1-like [Citrus
            sinensis]
          Length = 1865

 Score =  427 bits (1097), Expect = e-117
 Identities = 230/406 (56%), Positives = 279/406 (68%), Gaps = 7/406 (1%)
 Frame = -2

Query: 1282 KWCDMPCLMFSWQETSDVQLEGVSHILAAKICPVLLETIIKGDPRICTVNIIWTSPDTTT 1103
            K  +MPCLMF  +  SD  L+ +S +LA  I PVLLETIIKGDPRI + NIIW SPDTT 
Sbjct: 999  KRSNMPCLMFVLRGASDSYLDKLSGVLANMIYPVLLETIIKGDPRIYSANIIWISPDTTA 1058

Query: 1102 WTRNPSKTRKGELAVDIVLEKAAVKQKGDAWRIVVDSCLPIIHLIDTKRSVPYAITQVQE 923
            W RNPSK RKGELA+D+VLEK+ VKQ GDAWR V+DSCLP+ HLIDT+RSVPYAI QVQE
Sbjct: 1059 WIRNPSKNRKGELALDVVLEKSVVKQSGDAWRTVLDSCLPVFHLIDTRRSVPYAIKQVQE 1118

Query: 922  LLGVSCAFDQAVQRLFASVTMVTKGVLKEHLILLGNSMTCAGTLIGFTVGGYKELSRSLK 743
            LLGVSCAF+QAVQRL ASVTMV KGVLKEHLILL NSMTCAG L+GF  GGYK LSRSL 
Sbjct: 1119 LLGVSCAFEQAVQRLSASVTMVAKGVLKEHLILLANSMTCAGDLVGFNSGGYKALSRSLN 1178

Query: 742  VEVPFTEATLFTPRKCFEKAAEKRHIDSLSSIVASCSWGKHVSVGTGSRFEVLWDTNKIG 563
            V+VPFTEATLFTPRKCFEKAAEK H D+LSS+VA+CSWGKHV+VGTGSRF++LW T    
Sbjct: 1179 VQVPFTEATLFTPRKCFEKAAEKCHTDNLSSVVAACSWGKHVAVGTGSRFDLLWQTENEE 1238

Query: 562  SKKEAGIDIYNFLQMV-SVPDKEVADTDCLGADIDYLALEDEIVGEFGMSPEHDSGFGKP 386
              ++ G+D+Y+FL MV S    E +DT CLG ++D   LEDE   ++ +SPEH+    KP
Sbjct: 1239 FNQDDGVDVYDFLHMVRSSTGIEESDTGCLGEEVD--GLEDEF--DWSLSPEHNLCSDKP 1294

Query: 385  VFEDSADFQQGFENQMVPGGDTNGSPWDNRIASKNIESSSGGWDVAQNTTSTPKSNAW-- 212
            VFED  + Q   EN+         + WD+    +  +SS   W+    +   P S+ W  
Sbjct: 1295 VFEDLVEDQSWLENKQ------ENANWDSEADCR--KSSEDKWEKLGTSLEKP-SSGWRT 1345

Query: 211  -SGWGSDQGDTQDVSTEPS---PAWGGKEQENQLPSSQGGWDSANN 86
               WG    D  + +  PS     WG +    +  SS   W++  +
Sbjct: 1346 EGAWGKSSDDKLEKAGSPSRKPSGWGTEASWGE--SSCDKWENVGS 1389


>ref|XP_003541591.1| PREDICTED: DNA-directed RNA polymerase V subunit 1-like [Glycine max]
          Length = 2020

 Score =  421 bits (1081), Expect = e-115
 Identities = 217/400 (54%), Positives = 276/400 (69%), Gaps = 1/400 (0%)
 Frame = -2

Query: 1267 PCLMFSWQETSDVQLEGVSHILAAKICPVLLETIIKGDPRICTVNIIWTSPDTTTWTRNP 1088
            PCL F W +  D  L+    +L+  ICPVL ETIIKGDPRI + +IIW SPDT TW RNP
Sbjct: 1004 PCLTF-WLKNHDSDLDNAVKVLSENICPVLFETIIKGDPRISSASIIWVSPDTNTWVRNP 1062

Query: 1087 SKTRKGELAVDIVLEKAAVKQKGDAWRIVVDSCLPIIHLIDTKRSVPYAITQVQELLGVS 908
             K+  GELA+DIVLE+ AVKQ GDAWRIV+DSCLP++HLIDT+RS+PYAI Q+QELLG+S
Sbjct: 1063 YKSSNGELALDIVLEEEAVKQSGDAWRIVLDSCLPVLHLIDTRRSIPYAIKQIQELLGIS 1122

Query: 907  CAFDQAVQRLFASVTMVTKGVLKEHLILLGNSMTCAGTLIGFTVGGYKELSRSLKVEVPF 728
            C FDQA+QR+ ASV MV KGVL+EHLILL +SMTC G L+GF  GGYK LSR L ++VPF
Sbjct: 1123 CTFDQAIQRVAASVKMVAKGVLREHLILLASSMTCGGNLVGFNTGGYKALSRQLNIQVPF 1182

Query: 727  TEATLFTPRKCFEKAAEKRHIDSLSSIVASCSWGKHVSVGTGSRFEVLWDTNKIGSKKEA 548
            T+ATLFTP+KCFE+AAEK H DSLSSIVASCSWGKHV+VGTGS+F+++WD+++I S +  
Sbjct: 1183 TDATLFTPKKCFERAAEKCHTDSLSSIVASCSWGKHVAVGTGSKFDIVWDSSEIKSNEIE 1242

Query: 547  GIDIYNFLQMV-SVPDKEVADTDCLGADIDYLALEDEIVGEFGMSPEHDSGFGKPVFEDS 371
            G+D+Y+FL MV SV + E     CLG DID L LE+E + + GMSP+H+SGF + VFE++
Sbjct: 1243 GMDVYSFLHMVKSVTNGEEETDACLGEDIDDL-LEEEYM-DLGMSPQHNSGF-EAVFEEN 1299

Query: 370  ADFQQGFENQMVPGGDTNGSPWDNRIASKNIESSSGGWDVAQNTTSTPKSNAWSGWGSDQ 191
             +   G                          S+S GWDV+ N T + K+N WSGW S  
Sbjct: 1300 PEVLNG--------------------------STSNGWDVSSNQTQS-KTNEWSGWASSN 1332

Query: 190  GDTQDVSTEPSPAWGGKEQENQLPSSQGGWDSANNGGRNK 71
             D +   T    +W GK    +  S    W+++    + K
Sbjct: 1333 KDGRS-ETAQENSW-GKTVNQEDSSKSNAWNTSTTADQTK 1370


>ref|XP_004140346.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase E subunit
            1-like [Cucumis sativus]
          Length = 2019

 Score =  418 bits (1074), Expect = e-114
 Identities = 225/460 (48%), Positives = 290/460 (63%), Gaps = 62/460 (13%)
 Frame = -2

Query: 1273 DMPCLMFSWQETSDVQLEGVSHILAAKICPVLLETIIKGDPRICTVNIIWTSPDTTTWTR 1094
            DMPCL+F W +T DV LE  +HILA  + P+L ETIIKGDPRI + ++IW SPD+T+W +
Sbjct: 1032 DMPCLIF-WHQTRDVHLERTAHILADIVFPLLSETIIKGDPRIKSASVIWISPDSTSWQK 1090

Query: 1093 NPSKTRKGELAVDIVLEKAAVKQKGDAWRIVVDSCLPIIHLIDTKRSVPYAITQVQELLG 914
            NPS+ + GELA+D+ LEK+AVKQ GDAWR V+D CLP++HLIDT+RSVPYAI QVQELLG
Sbjct: 1091 NPSRWQDGELALDVCLEKSAVKQNGDAWRNVLDCCLPVLHLIDTRRSVPYAIKQVQELLG 1150

Query: 913  VSCAFDQAVQRLFASVTMVTKGVLKEHLILLGNSMTCAGTLIGFTVGGYKELSRSLKVEV 734
            +SCAFDQ +QRL  SV+MV+KGVL +HLILL NSMTC G +IGF  GGYK LSR+L ++V
Sbjct: 1151 ISCAFDQMIQRLSKSVSMVSKGVLGDHLILLANSMTCTGNMIGFNSGGYKALSRALNIQV 1210

Query: 733  PFTEATLF----------------------------TPRKCFEKAAEKRHIDSLSSIVAS 638
            PFTEATLF                            TPRKCFEKAAEK H DSLSSIVAS
Sbjct: 1211 PFTEATLFVSPFHSLVLSLYMKFNFFFLFFLNGXYTTPRKCFEKAAEKCHKDSLSSIVAS 1270

Query: 637  CSWGKHVSVGTGSRFEVLWDTNKIGSKKEAGIDIYNFLQMVSVPDKEVADTDCLGADIDY 458
            CSWGKHV+VGTGSRF++LWD  ++G K++  +D+YNFL MV     E   + CLG +I+ 
Sbjct: 1271 CSWGKHVAVGTGSRFDILWDQKELGCKQDDVVDVYNFLHMVRSGKSEEPTSACLGEEIED 1330

Query: 457  LALEDEIVGEFGMSPEHDSGFGKPVFEDSADFQQGFENQMVPGGDTNGSPWDNRIASKNI 278
            + +EDE  GE  +SPE  S   KPVFEDSA+F+   +N   PG     S W+   +   +
Sbjct: 1331 IMVEDE-YGELTLSPEPFSTSEKPVFEDSAEFEHCLDN--YPG----ESKWEKAPSLGAV 1383

Query: 277  ESSSGGWDVAQN--TTSTPKSNAWSGWG----------SDQGDTQDVSTEPSPAWGGKEQ 134
             +  G W+  +N   T++   N WSGWG          + Q +T + + + + +WG K  
Sbjct: 1384 STGGGQWESNENGKATNSSDGNDWSGWGRKAEPDVTVTNAQENTSNSAWDTTSSWGNKAT 1443

Query: 133  EN----------------------QLPSSQGGWDSANNGG 80
             +                      +     GGWDSA+  G
Sbjct: 1444 NSSNDNDWSNCSTKEVERDSFTSMEKTPKSGGWDSASTWG 1483


>ref|XP_006598109.1| PREDICTED: DNA-directed RNA polymerase V subunit 1-like [Glycine max]
          Length = 2082

 Score =  417 bits (1071), Expect = e-114
 Identities = 216/403 (53%), Positives = 279/403 (69%), Gaps = 4/403 (0%)
 Frame = -2

Query: 1267 PCLMFSWQETSDVQLEGVSHILAAKICPVLLETIIKGDPRICTVNIIWTSPDTTTWTRNP 1088
            PCL F W +  D  L+    +LA KICPVL +TII+GDPRI + +IIW SPDT TW RNP
Sbjct: 1004 PCLTF-WLKNYDSDLDNAVKVLAEKICPVLFKTIIQGDPRISSASIIWVSPDTNTWVRNP 1062

Query: 1087 SKTRKGELAVDIVLEKAAVKQKGDAWRIVVDSCLPIIHLIDTKRSVPYAITQVQELLGVS 908
             K+  GELA+DI+LEK AVKQ GDAWR+V+D+CLP++HLIDT+RS+PYAI Q+QELLG+S
Sbjct: 1063 YKSSNGELALDIILEKEAVKQSGDAWRVVLDACLPVLHLIDTRRSIPYAIKQIQELLGIS 1122

Query: 907  CAFDQAVQRLFASVTMVTKGVLKEHLILLGNSMTCAGTLIGFTVGGYKELSRSLKVEVPF 728
            C FDQA+QR+ ASV MV KGVL+EHLILL +SMTC G L+GF +GGYK LSR L ++VPF
Sbjct: 1123 CTFDQAIQRVAASVKMVAKGVLREHLILLASSMTCGGNLVGFNIGGYKALSRQLNIQVPF 1182

Query: 727  TEATLFTPRKCFEKAAEKRHIDSLSSIVASCSWGKHVSVGTGSRFEVLWDTNKIGSKKEA 548
            T+ATLFTP+KCFE+AAEK H DSLSSIVASCSWGKHV+VGTGS+F+V+WD N+I S +  
Sbjct: 1183 TDATLFTPKKCFERAAEKCHTDSLSSIVASCSWGKHVAVGTGSKFDVVWDANEIKSNEIE 1242

Query: 547  GIDIYNFLQMVSVPDKEVADTD-CLGADIDYLALEDEIVGEFGMSPEHDSGFGKPVFEDS 371
            G+D+Y+FL MV        +TD CLG DID L LE+E + + GMSP+H+SGF + VFE++
Sbjct: 1243 GMDVYSFLHMVKSFTNGEEETDACLGEDIDDL-LEEEYM-DLGMSPQHNSGF-EAVFEEN 1299

Query: 370  ADFQQGFENQMVPGGDTNGSPWDNRIASKNIESSSGGWDVAQNTTSTPKSNAWSGW-GSD 194
             +   G                          S+S GWDV+ N   + K+N WSGW  S+
Sbjct: 1300 PEVLNG--------------------------STSNGWDVSSNQGES-KTNEWSGWASSN 1332

Query: 193  QGDTQDVSTE--PSPAWGGKEQENQLPSSQGGWDSANNGGRNK 71
            + + +D  +E  P  +W GK    +  S    W ++    + K
Sbjct: 1333 KAEIKDGRSEIAPKNSW-GKTVNQEDSSKSNPWSTSTIADQTK 1374


>gb|EYU38281.1| hypothetical protein MIMGU_mgv1a000048mg [Mimulus guttatus]
          Length = 2113

 Score =  416 bits (1070), Expect = e-114
 Identities = 217/394 (55%), Positives = 267/394 (67%)
 Frame = -2

Query: 1282 KWCDMPCLMFSWQETSDVQLEGVSHILAAKICPVLLETIIKGDPRICTVNIIWTSPDTTT 1103
            K  D+PC+ F WQ   D  LE  S+ LA  +CPVLL+TIIKGDPRI T N++W SPDT T
Sbjct: 997  KLTDVPCIQFFWQGAPDNLLERASYFLADTVCPVLLQTIIKGDPRISTANVVWLSPDTPT 1056

Query: 1102 WTRNPSKTRKGELAVDIVLEKAAVKQKGDAWRIVVDSCLPIIHLIDTKRSVPYAITQVQE 923
            W R+PSK+  GELA+DIVLEK AV++ GDAWR+V+DSCLP++HLIDT+RS+PY I QVQE
Sbjct: 1057 WIRSPSKSPIGELALDIVLEKEAVRKSGDAWRVVMDSCLPVMHLIDTQRSIPYGIKQVQE 1116

Query: 922  LLGVSCAFDQAVQRLFASVTMVTKGVLKEHLILLGNSMTCAGTLIGFTVGGYKELSRSLK 743
            LLG+SCAF+QAVQRL  SVTMVTKGVLK+HL+LLGNSMTCAGTLIGF  GG K LSR L 
Sbjct: 1117 LLGISCAFEQAVQRLSTSVTMVTKGVLKDHLLLLGNSMTCAGTLIGFNSGGIKALSRLLG 1176

Query: 742  VEVPFTEATLFTPRKCFEKAAEKRHIDSLSSIVASCSWGKHVSVGTGSRFEVLWDTNKIG 563
            V+VPF  ATLFTPRKCFEKAAEK ++D+LSSIVASC+WGKHVSVGTGS FE+LWDT K  
Sbjct: 1177 VQVPFMNATLFTPRKCFEKAAEKCYVDNLSSIVASCAWGKHVSVGTGSPFEILWDTRKAE 1236

Query: 562  SKKEAGIDIYNFLQMVSVPDKEVADTDCLGADIDYLALEDEIVGEFGMSPEHDSGFGKPV 383
               +  ID+Y+FL MV+    E A T CLGADI+ L  ED +  +  +SP  + G  KP 
Sbjct: 1237 LSPDKEIDVYDFLHMVNSSKLEDAGTSCLGADIEDLGQEDYM--DLDLSPVREPGSEKPT 1294

Query: 382  FEDSADFQQGFENQMVPGGDTNGSPWDNRIASKNIESSSGGWDVAQNTTSTPKSNAWSGW 203
            FE   +F    +     GG  +   W +    K +++       A+ TT   K +  +  
Sbjct: 1295 FECEVEFGLNGDGFSKEGGKESEDSWSS--WGKKVDTEDDWTKKAELTTWGKKVDREADD 1352

Query: 202  GSDQGDTQDVSTEPSPAWGGKEQENQLPSSQGGW 101
               +G       E S +WG K     + S  GGW
Sbjct: 1353 WILKGQKSKTDEENSSSWGKK-----VESDAGGW 1381


>gb|AAX12374.1| DNA-directed RNA polymerase alpha subunit [Spinacia oleracea]
          Length = 1902

 Score =  416 bits (1068), Expect = e-113
 Identities = 217/410 (52%), Positives = 284/410 (69%), Gaps = 6/410 (1%)
 Frame = -2

Query: 1282 KWCDMPCLMFSWQETSDVQLEGVSHILAAKICPVLLETIIKGDPRICTVNIIWTSPDTTT 1103
            KW DMPCL F WQ+ +D  LE   HI+A  ICPVLL+TIIKGDPRI TVNIIW +P TTT
Sbjct: 799  KWTDMPCLKFFWQDMTDTDLERTKHIMADMICPVLLDTIIKGDPRISTVNIIWINPGTTT 858

Query: 1102 WTRNPSKTRKGELAVDIVLEKAAVKQKGDAWRIVVDSCLPIIHLIDTKRSVPYAITQVQE 923
            W ++P  + KGELAV++ LEK AV+  GDAWRIV+D CLP+ HLIDT+RS+PYAI Q+Q+
Sbjct: 859  WVQSPCSSTKGELAVEVALEKEAVRLTGDAWRIVLDCCLPVFHLIDTRRSIPYAIKQIQD 918

Query: 922  LLGVSCAFDQAVQRLFASVTMVTKGVLKEHLILLGNSMTCAGTLIGFTVGGYKELSRSLK 743
            L G+SCAFDQAVQRL  SVTMVTKGVLKEHL+LL +SMTCAG L+GF   G K L R+L 
Sbjct: 919  LFGISCAFDQAVQRLSTSVTMVTKGVLKEHLLLLASSMTCAGNLVGFNTSGIKALCRALN 978

Query: 742  VEVPFTEATLFTPRKCFEKAAEKRHIDSLSSIVASCSWGKHVSVGTGSRFEVLWDTNKIG 563
            V+VPFTEATL+TPRKCFE+A+EK H+D+L+SIV SCSWGK VS+GTG++F++LW+T +I 
Sbjct: 979  VQVPFTEATLYTPRKCFERASEKCHVDTLASIVGSCSWGKRVSIGTGAKFDLLWETKEI- 1037

Query: 562  SKKEAGIDIYNFLQMVSVPDKEVADTDCLGADIDYLALEDEIVGEFGMSPEHDSGFGKPV 383
               +   D+YNFL +VS  ++E  D+  LG DI+  + E ++  E  +SPE ++   K V
Sbjct: 1038 EMADKPTDVYNFLHLVSSANEEEVDSGGLGEDIE--SFEKDVYMEPALSPEQEN---KAV 1092

Query: 382  FEDSADFQQGFENQMVPGGDTNGSPWDNRIASKNIESSSGGWDVAQ-NTTSTPKSNAWSG 206
            FE++ +   G ++  + G D   S WD         SS  GW+  + +T S      WS 
Sbjct: 1093 FEETLEI--GVDSD-ITGADE--SSWD------AFPSSGTGWNANKIDTGSGSAEGGWSS 1141

Query: 205  WGS--DQGDTQDVSTEPSPAWGGKEQENQL--PSSQGGWDSANN-GGRNK 71
            WGS  DQ + +D S     + GG +Q+ Q    S  GGWD++ + GG N+
Sbjct: 1142 WGSKKDQANPEDSSKTGGWSSGGSKQKPQPEDSSKSGGWDASKSWGGSNQ 1191


>ref|XP_004511031.1| PREDICTED: DNA-directed RNA polymerase E subunit 1-like [Cicer
            arietinum]
          Length = 2263

 Score =  413 bits (1061), Expect = e-112
 Identities = 211/402 (52%), Positives = 272/402 (67%), Gaps = 8/402 (1%)
 Frame = -2

Query: 1267 PCLMFSWQETSDVQLEGVSHILAAKICPVLLETIIKGDPRICTVNIIWTSPDTTTWTRNP 1088
            PC+   W +  D  L+  + +LA  ICPVLL+TII+GDPRI + NIIW +P T TW RNP
Sbjct: 1003 PCVTILWPDGDD--LDQTTKVLADMICPVLLDTIIQGDPRISSANIIWVNPGTNTWVRNP 1060

Query: 1087 SKTRKGELAVDIVLEKAAVKQKGDAWRIVVDSCLPIIHLIDTKRSVPYAITQVQELLGVS 908
            SK+  GELA+D++LEK AVKQ GDAWRI++DSCLP++HLIDT+RS PYAI Q+QELLG+S
Sbjct: 1061 SKSSNGELALDVILEKEAVKQSGDAWRIILDSCLPVLHLIDTRRSTPYAIKQIQELLGIS 1120

Query: 907  CAFDQAVQRLFASVTMVTKGVLKEHLILLGNSMTCAGTLIGFTVGGYKELSRSLKVEVPF 728
            C FDQA+QRL ASV MV KGVL+EHLILL +SMTC G L+GF  GGYK L+R L ++VPF
Sbjct: 1121 CTFDQAIQRLAASVRMVAKGVLREHLILLASSMTCGGNLVGFNTGGYKTLARQLNIQVPF 1180

Query: 727  TEATLFTPRKCFEKAAEKRHIDSLSSIVASCSWGKHVSVGTGSRFEVLWDTNKIGSKKEA 548
            T+ATLFTPRKCFE+AAEKRH DSLSSIVASCSWGKHV+VGTGSRF+++WD  ++ S +  
Sbjct: 1181 TDATLFTPRKCFERAAEKRHADSLSSIVASCSWGKHVAVGTGSRFDIVWDPKEVKSNEIE 1240

Query: 547  GIDIYNFLQMV-SVPDKEVADTDCLGADIDYLALEDEIVGEFGMSPEHDSGFGKPVFEDS 371
            G+D+YNFL MV  + + +  +  CLG DID L  +D +  ++GMSPEH SGF   VF++S
Sbjct: 1241 GMDVYNFLNMVKGLANGDEENNACLGEDIDDLLDDDNM--DWGMSPEHTSGF-DAVFDES 1297

Query: 370  ADFQQGFENQMVPGGDTNGSPWDNRIASKNIESSSGGWDVAQNTTSTPKSNAWSGWGSDQ 191
             +   G                          S+S GWD  ++   T  +N WSGWG ++
Sbjct: 1298 FELLNG--------------------------STSNGWDSNKDQNKT-TTNDWSGWGQNK 1330

Query: 190  GDTQDVSTEPSPAWG-GKEQE------NQLPSSQGGWDSANN 86
             + Q V    +  WG G  Q+       +  S  G W++  N
Sbjct: 1331 SEIQ-VDVAETDQWGSGSTQKWKADITKEDSSKSGAWETGTN 1371


>ref|XP_002299207.2| hypothetical protein POPTR_0001s06460g [Populus trichocarpa]
            gi|550346662|gb|EEE84012.2| hypothetical protein
            POPTR_0001s06460g [Populus trichocarpa]
          Length = 888

 Score =  410 bits (1053), Expect = e-112
 Identities = 222/371 (59%), Positives = 257/371 (69%), Gaps = 7/371 (1%)
 Frame = -2

Query: 1165 IKGDPRICTVNIIWTSPDTTTWTRNPSKTRKGELAVDIVLEKAAVKQKGDAWRIVVDSCL 986
            + GD RI   NIIW S +TTTW RNPS+T+KGELA+DIVLEK+ VKQ GDAWRIV+DSCL
Sbjct: 9    VSGDHRISCANIIWASQETTTWIRNPSRTQKGELALDIVLEKSVVKQSGDAWRIVLDSCL 68

Query: 985  PIIHLIDTKRSVPYAITQVQELLGVSCAFDQAVQRLFASVTMVTKGVLKEHLILLGNSMT 806
            P++HLIDT RSVPYAI QVQELLGVSCAFDQAVQRL  SVTMV KGVLKEHLILLGNSMT
Sbjct: 69   PVLHLIDTTRSVPYAIKQVQELLGVSCAFDQAVQRLSKSVTMVAKGVLKEHLILLGNSMT 128

Query: 805  CAGTLIGFTVGGYKELSRSLKVEVPFTEATLFTPRKCFEKAAEKRHIDSLSSIVASCSWG 626
            CAG+LIGF  GGYK LSRSL ++VPFTEATLFTPRKCFEKAAEK H D LSSIVASCSWG
Sbjct: 129  CAGSLIGFYTGGYKTLSRSLDIQVPFTEATLFTPRKCFEKAAEKCHTDYLSSIVASCSWG 188

Query: 625  KHVSVGTGSRFEVLWDTNKIGSKKEAGIDIYNFLQMV-SVPDKEVADTDCLGADIDYLAL 449
            KHV+VGTGSRF+VLWDT +     E GID Y+FL MV S    E + T CLGA++D L L
Sbjct: 189  KHVTVGTGSRFDVLWDTKEACLNPEGGIDAYSFLNMVRSTAGGEESVTACLGAEVDDLIL 248

Query: 448  EDEIVGEFGMSPEHDSGFGKPVFEDSADFQQGFENQMVPGGDTNGSPWDNRIASKNIESS 269
            EDE   ++ +SPEH S   KP FEDSA+FQ    NQ         S W    + K+   S
Sbjct: 249  EDE---DWNLSPEHHSSSDKPTFEDSAEFQDFLGNQPAE------SNWGKASSLKDGSWS 299

Query: 268  SGGWDVAQNTTSTPKSNAWSGWGSDQGDTQDVSTEP------SPAWGGKEQENQLPSSQG 107
            +G WDV +N  S  K   WS  G    +T DV  +       + +W  +    Q  +S  
Sbjct: 300  AGNWDVDKN-DSAGKEKPWS-LGMSSAETNDVGWDTAATRKINSSWNSENDVTQ-SNSLS 356

Query: 106  GWDSANNGGRN 74
            GW +  +   N
Sbjct: 357  GWATKKSETHN 367


>ref|XP_007133762.1| hypothetical protein PHAVU_011G206900g [Phaseolus vulgaris]
            gi|561006762|gb|ESW05756.1| hypothetical protein
            PHAVU_011G206900g [Phaseolus vulgaris]
          Length = 2052

 Score =  406 bits (1044), Expect = e-111
 Identities = 209/401 (52%), Positives = 269/401 (67%), Gaps = 3/401 (0%)
 Frame = -2

Query: 1267 PCLMFSWQETSDVQLEGVSHILAAKICPVLLETIIKGDPRICTVNIIWTSPDTTTWTRNP 1088
            PCL F W E  + + +    IL+ KICPVLLETII+GDPRI + +IIW +PDT TW RNP
Sbjct: 1000 PCLTFVWVEDRNNEFDYTVKILSEKICPVLLETIIQGDPRISSASIIWVTPDTNTWVRNP 1059

Query: 1087 SKTRKGELAVDIVLEKAAVKQKGDAWRIVVDSCLPIIHLIDTKRSVPYAITQVQELLGVS 908
             K+  GELA+DI+LEK  VKQ GDAWRIV+DSCLP++HLIDT+RS+PYAI Q QELLG+S
Sbjct: 1060 YKSSTGELALDIILEKEVVKQSGDAWRIVLDSCLPVLHLIDTRRSIPYAIKQTQELLGIS 1119

Query: 907  CAFDQAVQRLFASVTMVTKGVLKEHLILLGNSMTCAGTLIGFTVGGYKELSRSLKVEVPF 728
            C FDQA+QR+ ASV MV KGVL+EHLILL +SMTC G ++GF  GGYK LSR L ++VPF
Sbjct: 1120 CTFDQAIQRVAASVKMVAKGVLREHLILLASSMTCGGNMVGFNTGGYKALSRQLNIQVPF 1179

Query: 727  TEATLFTPRKCFEKAAEKRHIDSLSSIVASCSWGKHVSVGTGSRFEVLWDTNKIGSKKEA 548
            T+ATLFTP+KCFE+AAEK H DSLSSIVASCSWGK V+VGTGS+F+++WD NKI S +  
Sbjct: 1180 TDATLFTPKKCFERAAEKCHTDSLSSIVASCSWGKPVAVGTGSKFDIVWDANKIRSSEIE 1239

Query: 547  GIDIYNFLQMVSVPDKEVADTD-CLGADIDYLALEDEIVGEFGMSPEHDSGFGKPVFEDS 371
            G+D+Y+FL MV        +TD CLG DID L  E+ +  +  MSP  +SGF + VFE++
Sbjct: 1240 GMDVYSFLHMVKGRTDREEETDACLGEDIDDLLEEENL--DLEMSPPRNSGF-EAVFEEN 1296

Query: 370  ADFQQGFENQMVPGGDTNGSPWDNRIASKNIESSSGGWDVAQNTTSTPKSNAWSGWGSDQ 191
             +                              S+S GWDV  + T + K+N WSGW S++
Sbjct: 1297 PEVLN--------------------------NSTSNGWDVNSSQTES-KTNGWSGWVSNK 1329

Query: 190  GDTQDVSTE--PSPAWGGKEQENQLPSSQGGWDSANNGGRN 74
             +T +  ++     +W GK    +  S    W++   G  N
Sbjct: 1330 AETNEGRSDRAQESSW-GKTVTQEDSSKSSAWNTNTTGHTN 1369