BLASTX nr result
ID: Paeonia25_contig00019930
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Paeonia25_contig00019930
(896 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI30093.3| unnamed protein product [Vitis vinifera] 320 4e-85
ref|XP_003632734.1| PREDICTED: DNA-directed RNA polymerases I, I... 320 4e-85
ref|XP_006442079.1| hypothetical protein CICLE_v10021999mg [Citr... 304 3e-80
ref|XP_007028544.1| Eukaryotic rpb5 RNA polymerase subunit famil... 301 3e-79
ref|XP_006364435.1| PREDICTED: DNA-directed RNA polymerase V sub... 300 7e-79
ref|XP_007202529.1| hypothetical protein PRUPE_ppa010980mg [Prun... 300 7e-79
ref|XP_004237333.1| PREDICTED: DNA-directed RNA polymerases I, I... 298 1e-78
ref|XP_002529165.1| DNA-directed RNA polymerase II, putative [Ri... 296 7e-78
ref|XP_004136650.1| PREDICTED: DNA-directed RNA polymerases I, I... 294 3e-77
ref|XP_004303601.1| PREDICTED: DNA-directed RNA polymerases I, I... 292 1e-76
ref|XP_007162116.1| hypothetical protein PHAVU_001G125200g [Phas... 290 4e-76
ref|XP_002323257.2| hypothetical protein POPTR_0016s03800g [Popu... 290 5e-76
ref|NP_001236527.1| uncharacterized protein LOC100306033 [Glycin... 288 2e-75
ref|XP_004493418.1| PREDICTED: DNA-directed RNA polymerases I, I... 287 3e-75
ref|XP_003625033.1| DNA-directed RNA polymerases I, II, and III ... 281 2e-73
ref|XP_006347844.1| PREDICTED: DNA-directed RNA polymerase V sub... 280 4e-73
gb|EXB41191.1| DNA-directed RNA polymerases I, II, and III subun... 280 7e-73
gb|AFK43162.1| unknown [Medicago truncatula] 279 9e-73
ref|XP_004230150.1| PREDICTED: DNA-directed RNA polymerases I, I... 277 5e-72
ref|XP_006402913.1| hypothetical protein EUTSA_v10006218mg [Eutr... 271 3e-70
>emb|CBI30093.3| unnamed protein product [Vitis vinifera]
Length = 330
Score = 320 bits (821), Expect = 4e-85
Identities = 163/229 (71%), Positives = 192/229 (83%), Gaps = 3/229 (1%)
Frame = -2
Query: 814 MDGNGYADG--NGGVS-GTCLSSYIDEGSVESNRYYLSRRTVLEMLRDRGYTVPTNEIDL 644
MDG G+ DG NG CLSS++DEG +ES+RYYL+RRT+LEMLRDRGY++P +ID+
Sbjct: 102 MDGGGWFDGDLNGDFEVKRCLSSFVDEGRIESHRYYLARRTLLEMLRDRGYSIPALDIDI 161
Query: 643 SLQEFRSIYGQKPDPDRFRITTSLRSDPSNKVLVIFLGTGVVKVNVIRSLATQIVHKESL 464
SLQ+FRS Y QKPDPDR RI+ +LRSDPS K+LVIF G VVKVN IRS+ATQIV+K+SL
Sbjct: 162 SLQDFRSFYSQKPDPDRLRISAALRSDPSKKILVIFCGPDVVKVNAIRSIATQIVNKDSL 221
Query: 463 NRLILILQSPITSQAQKAVELFSFKVDIFDITDLIVNITKHVLKPKHQVLTXXXXXXXXX 284
++LIL+LQ+ ITSQA KAV+LFSF+V+ F ITDL+VNITKHVLKPKH+VLT
Sbjct: 222 SKLILVLQNHITSQALKAVDLFSFQVEKFQITDLLVNITKHVLKPKHRVLTDQEKNKLLK 281
Query: 283 KYSLDEKQLPRMLQKDAIARYYGLEKGQVVKVTYNGEITESHVTYRCVW 137
KYSL+EKQLPRMLQ+DAIARYYGLEKGQVVKV YNGEIT SHVTYRCVW
Sbjct: 282 KYSLNEKQLPRMLQQDAIARYYGLEKGQVVKVIYNGEITGSHVTYRCVW 330
>ref|XP_003632734.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC1-like [Vitis vinifera]
Length = 229
Score = 320 bits (821), Expect = 4e-85
Identities = 163/229 (71%), Positives = 192/229 (83%), Gaps = 3/229 (1%)
Frame = -2
Query: 814 MDGNGYADG--NGGVS-GTCLSSYIDEGSVESNRYYLSRRTVLEMLRDRGYTVPTNEIDL 644
MDG G+ DG NG CLSS++DEG +ES+RYYL+RRT+LEMLRDRGY++P +ID+
Sbjct: 1 MDGGGWFDGDLNGDFEVKRCLSSFVDEGRIESHRYYLARRTLLEMLRDRGYSIPALDIDI 60
Query: 643 SLQEFRSIYGQKPDPDRFRITTSLRSDPSNKVLVIFLGTGVVKVNVIRSLATQIVHKESL 464
SLQ+FRS Y QKPDPDR RI+ +LRSDPS K+LVIF G VVKVN IRS+ATQIV+K+SL
Sbjct: 61 SLQDFRSFYSQKPDPDRLRISAALRSDPSKKILVIFCGPDVVKVNAIRSIATQIVNKDSL 120
Query: 463 NRLILILQSPITSQAQKAVELFSFKVDIFDITDLIVNITKHVLKPKHQVLTXXXXXXXXX 284
++LIL+LQ+ ITSQA KAV+LFSF+V+ F ITDL+VNITKHVLKPKH+VLT
Sbjct: 121 SKLILVLQNHITSQALKAVDLFSFQVEKFQITDLLVNITKHVLKPKHRVLTDQEKNKLLK 180
Query: 283 KYSLDEKQLPRMLQKDAIARYYGLEKGQVVKVTYNGEITESHVTYRCVW 137
KYSL+EKQLPRMLQ+DAIARYYGLEKGQVVKV YNGEIT SHVTYRCVW
Sbjct: 181 KYSLNEKQLPRMLQQDAIARYYGLEKGQVVKVIYNGEITGSHVTYRCVW 229
>ref|XP_006442079.1| hypothetical protein CICLE_v10021999mg [Citrus clementina]
gi|568879109|ref|XP_006492520.1| PREDICTED: DNA-directed
RNA polymerase V subunit 5A-like isoform X1 [Citrus
sinensis] gi|557544341|gb|ESR55319.1| hypothetical
protein CICLE_v10021999mg [Citrus clementina]
Length = 236
Score = 304 bits (778), Expect = 3e-80
Identities = 155/234 (66%), Positives = 189/234 (80%), Gaps = 9/234 (3%)
Frame = -2
Query: 811 DGNGY-----ADGNGGVSG----TCLSSYIDEGSVESNRYYLSRRTVLEMLRDRGYTVPT 659
DGNGY +G G +G +CLS ++D GS +S RYYLSRRTVLEML+DRGY V
Sbjct: 3 DGNGYDSSMEMEGGNGYNGEPTESCLSGFVDNGSRDSLRYYLSRRTVLEMLKDRGYAVAL 62
Query: 658 NEIDLSLQEFRSIYGQKPDPDRFRITTSLRSDPSNKVLVIFLGTGVVKVNVIRSLATQIV 479
+EI+LS+Q+FR+IYGQ PD DR RI+ S +SDPS ++LV+F G G+VKVNVIRS+ +QIV
Sbjct: 63 SEINLSVQDFRAIYGQDPDVDRLRISISHQSDPSKRILVVFCGPGIVKVNVIRSIISQIV 122
Query: 478 HKESLNRLILILQSPITSQAQKAVELFSFKVDIFDITDLIVNITKHVLKPKHQVLTXXXX 299
++++L LILILQ+ ITSQA KAV LF FKV++F ITDL+VNITKHVLKPKHQVLT
Sbjct: 123 NRDTLTGLILILQNQITSQATKAVGLFQFKVEMFQITDLLVNITKHVLKPKHQVLTDQEK 182
Query: 298 XXXXXKYSLDEKQLPRMLQKDAIARYYGLEKGQVVKVTYNGEITESHVTYRCVW 137
KYS++EKQLPRML+KDAIA+YYGLE+GQVVKVTY+GEITESHVTYRCVW
Sbjct: 183 EKLLKKYSIEEKQLPRMLKKDAIAQYYGLERGQVVKVTYSGEITESHVTYRCVW 236
>ref|XP_007028544.1| Eukaryotic rpb5 RNA polymerase subunit family protein isoform 1
[Theobroma cacao] gi|508717149|gb|EOY09046.1| Eukaryotic
rpb5 RNA polymerase subunit family protein isoform 1
[Theobroma cacao]
Length = 228
Score = 301 bits (770), Expect = 3e-79
Identities = 153/228 (67%), Positives = 186/228 (81%), Gaps = 2/228 (0%)
Frame = -2
Query: 814 MDGNGY-ADG-NGGVSGTCLSSYIDEGSVESNRYYLSRRTVLEMLRDRGYTVPTNEIDLS 641
M+GNG DG NG G CLS +D+GS ES+RYYLSRRTVLEMLRDRGY VP +EI+LS
Sbjct: 1 MEGNGLEGDGSNGEALGKCLSGVVDDGSTESHRYYLSRRTVLEMLRDRGYAVPISEINLS 60
Query: 640 LQEFRSIYGQKPDPDRFRITTSLRSDPSNKVLVIFLGTGVVKVNVIRSLATQIVHKESLN 461
LQEFR+IYGQ PD DR R++ + ++DPS ++LV+F G G+VKV+ IR +A I +KESL
Sbjct: 61 LQEFRAIYGQSPDFDRLRLSATHKTDPSKRILVVFYGPGMVKVSGIRLIAGLITNKESLT 120
Query: 460 RLILILQSPITSQAQKAVELFSFKVDIFDITDLIVNITKHVLKPKHQVLTXXXXXXXXXK 281
LIL+LQ+ IT+QA KA++LFSFKV+IF ITDL+VNITKHVLKPKHQVLT K
Sbjct: 121 GLILVLQNHITNQALKALDLFSFKVEIFQITDLLVNITKHVLKPKHQVLTEQEKQKLLQK 180
Query: 280 YSLDEKQLPRMLQKDAIARYYGLEKGQVVKVTYNGEITESHVTYRCVW 137
YS++EKQLPR+L+KDAIARYYG E+GQVVKV Y+GEIT+SHVTYRCVW
Sbjct: 181 YSIEEKQLPRLLKKDAIARYYGYERGQVVKVMYDGEITQSHVTYRCVW 228
>ref|XP_006364435.1| PREDICTED: DNA-directed RNA polymerase V subunit 5A-like [Solanum
tuberosum]
Length = 227
Score = 300 bits (767), Expect = 7e-79
Identities = 149/227 (65%), Positives = 187/227 (82%), Gaps = 1/227 (0%)
Frame = -2
Query: 814 MDGNGYA-DGNGGVSGTCLSSYIDEGSVESNRYYLSRRTVLEMLRDRGYTVPTNEIDLSL 638
MD NG A D +G GTCL+S++D+G+VES+RY+L+RRT+LEML+DRG+ +P +EID +L
Sbjct: 1 MDLNGLAMDVDGDNLGTCLASFVDDGTVESHRYFLARRTILEMLKDRGFAIPNSEIDTTL 60
Query: 637 QEFRSIYGQKPDPDRFRITTSLRSDPSNKVLVIFLGTGVVKVNVIRSLATQIVHKESLNR 458
QEFR YGQ PD +R R++ R+D +NKVLVIF G VKVNVIRS+ TQI++KESL+R
Sbjct: 61 QEFREKYGQTPDVERLRVSAMHRNDLTNKVLVIFCGPNAVKVNVIRSILTQIMNKESLSR 120
Query: 457 LILILQSPITSQAQKAVELFSFKVDIFDITDLIVNITKHVLKPKHQVLTXXXXXXXXXKY 278
LIL++Q+ +T+ A KAVELFSFKV+IF ITDL+VNITKHVLKP+H++LT KY
Sbjct: 121 LILVIQNQMTNPAMKAVELFSFKVEIFQITDLLVNITKHVLKPRHELLTDTEKEKLLKKY 180
Query: 277 SLDEKQLPRMLQKDAIARYYGLEKGQVVKVTYNGEITESHVTYRCVW 137
+L+EKQLPRM QKDAIARYYGLEKGQVVKVTY+ EI E+HVTYRCVW
Sbjct: 181 NLEEKQLPRMSQKDAIARYYGLEKGQVVKVTYSSEIIETHVTYRCVW 227
>ref|XP_007202529.1| hypothetical protein PRUPE_ppa010980mg [Prunus persica]
gi|462398060|gb|EMJ03728.1| hypothetical protein
PRUPE_ppa010980mg [Prunus persica]
Length = 228
Score = 300 bits (767), Expect = 7e-79
Identities = 144/229 (62%), Positives = 186/229 (81%)
Frame = -2
Query: 823 EAEMDGNGYADGNGGVSGTCLSSYIDEGSVESNRYYLSRRTVLEMLRDRGYTVPTNEIDL 644
E + + NG D NG + G CL+ Y+D+GS ES+RYYLSRRTVLEM+RDRGY+VP++EIDL
Sbjct: 2 EGDAEANG--DANGEILGPCLTGYVDDGSPESHRYYLSRRTVLEMIRDRGYSVPSSEIDL 59
Query: 643 SLQEFRSIYGQKPDPDRFRITTSLRSDPSNKVLVIFLGTGVVKVNVIRSLATQIVHKESL 464
SLQ+FR+++GQ PD +R R + + R+DPS++++VI+ G G+VKVNVIR L +QI +K++L
Sbjct: 60 SLQDFRALHGQNPDVERLRFSATHRTDPSDRIMVIYCGPGIVKVNVIRGLHSQIANKDTL 119
Query: 463 NRLILILQSPITSQAQKAVELFSFKVDIFDITDLIVNITKHVLKPKHQVLTXXXXXXXXX 284
N LILI Q+ ITSQA K +EL+ FK +IF ITDL+VNITKHVLKPKH VLT
Sbjct: 120 NGLILITQNQITSQALKTMELYPFKTEIFQITDLLVNITKHVLKPKHHVLTEQEKQKLLK 179
Query: 283 KYSLDEKQLPRMLQKDAIARYYGLEKGQVVKVTYNGEITESHVTYRCVW 137
KY+++E QLPR+ +KDAIA+YYGLEKGQVVKVTY G+ITESHVTYRC+W
Sbjct: 180 KYNIEENQLPRLSRKDAIAQYYGLEKGQVVKVTYTGDITESHVTYRCIW 228
>ref|XP_004237333.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC1-like [Solanum lycopersicum]
Length = 227
Score = 298 bits (764), Expect = 1e-78
Identities = 149/227 (65%), Positives = 187/227 (82%), Gaps = 1/227 (0%)
Frame = -2
Query: 814 MDGNGYA-DGNGGVSGTCLSSYIDEGSVESNRYYLSRRTVLEMLRDRGYTVPTNEIDLSL 638
MD NG A D +G GTCL+S++D+G+VES+RY+L+RRT+LEML+DRG+ +P +EID +L
Sbjct: 1 MDLNGLAMDVDGENLGTCLASFVDDGTVESHRYFLARRTILEMLKDRGFAIPNSEIDTTL 60
Query: 637 QEFRSIYGQKPDPDRFRITTSLRSDPSNKVLVIFLGTGVVKVNVIRSLATQIVHKESLNR 458
QEFR YGQ PD +R R++ R+D +NKVLVIF G VKVNVIRS+ TQI++KESL+R
Sbjct: 61 QEFREKYGQTPDVERLRVSAMHRNDLTNKVLVIFCGPNAVKVNVIRSILTQIMNKESLSR 120
Query: 457 LILILQSPITSQAQKAVELFSFKVDIFDITDLIVNITKHVLKPKHQVLTXXXXXXXXXKY 278
LIL++Q+ +T+ A KAVELFSFKV+IF ITDL+VNITKHVLKP+H++LT KY
Sbjct: 121 LILVIQNQMTNPALKAVELFSFKVEIFQITDLLVNITKHVLKPRHELLTDTEKEKLLKKY 180
Query: 277 SLDEKQLPRMLQKDAIARYYGLEKGQVVKVTYNGEITESHVTYRCVW 137
+L+EKQLPRM QKDAIARYYGLEKGQVVKVTY+ EI E+HVTYRCVW
Sbjct: 181 NLEEKQLPRMSQKDAIARYYGLEKGQVVKVTYSSEIIETHVTYRCVW 227
>ref|XP_002529165.1| DNA-directed RNA polymerase II, putative [Ricinus communis]
gi|223531389|gb|EEF33224.1| DNA-directed RNA polymerase
II, putative [Ricinus communis]
Length = 238
Score = 296 bits (758), Expect = 7e-78
Identities = 144/212 (67%), Positives = 178/212 (83%)
Frame = -2
Query: 772 GTCLSSYIDEGSVESNRYYLSRRTVLEMLRDRGYTVPTNEIDLSLQEFRSIYGQKPDPDR 593
G C SSY D+G+ E++RYYLSRRTVLEMLRDRGY+VP++EIDLSLQEFR+I+G PD DR
Sbjct: 27 GKCFSSYADDGTHETHRYYLSRRTVLEMLRDRGYSVPSSEIDLSLQEFRAIHGPNPDIDR 86
Query: 592 FRITTSLRSDPSNKVLVIFLGTGVVKVNVIRSLATQIVHKESLNRLILILQSPITSQAQK 413
+ + + SDPS ++LV+F G G++KV+ IR++A QIV+K+SL LIL+LQ+ IT+QA K
Sbjct: 87 LKFSATHTSDPSKRMLVLFGGPGIIKVSTIRAIAGQIVNKDSLTGLILVLQNQITNQAMK 146
Query: 412 AVELFSFKVDIFDITDLIVNITKHVLKPKHQVLTXXXXXXXXXKYSLDEKQLPRMLQKDA 233
AV+LF FKV++F ITDL+VNITKHVLKPKHQVLT Y ++EKQLPR+L+KDA
Sbjct: 147 AVDLFKFKVEMFQITDLLVNITKHVLKPKHQVLTDREKQKLLKDYCIEEKQLPRLLRKDA 206
Query: 232 IARYYGLEKGQVVKVTYNGEITESHVTYRCVW 137
IARYYGLEKGQVVKVTY+GEITESHVTYRCVW
Sbjct: 207 IARYYGLEKGQVVKVTYSGEITESHVTYRCVW 238
>ref|XP_004136650.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC1-like [Cucumis sativus]
gi|449524637|ref|XP_004169328.1| PREDICTED: DNA-directed
RNA polymerases I, II, and III subunit RPABC1-like
[Cucumis sativus]
Length = 227
Score = 294 bits (753), Expect = 3e-77
Identities = 145/227 (63%), Positives = 184/227 (81%), Gaps = 1/227 (0%)
Frame = -2
Query: 814 MDGNGY-ADGNGGVSGTCLSSYIDEGSVESNRYYLSRRTVLEMLRDRGYTVPTNEIDLSL 638
M+ +G+ A+ N GTCLSSYID+G+ ES+RY+LSRRTV+EML+DRGYT+ + ID SL
Sbjct: 1 MEEDGFEAEPNPVEFGTCLSSYIDDGTTESHRYFLSRRTVVEMLKDRGYTINSPNIDFSL 60
Query: 637 QEFRSIYGQKPDPDRFRITTSLRSDPSNKVLVIFLGTGVVKVNVIRSLATQIVHKESLNR 458
Q+FR +GQ PD DR +++ + SDPS +VLV+F GTG VKVN IR++A QI +K+SL+
Sbjct: 61 QQFRETFGQFPDVDRLKLSAAHHSDPSKRVLVVFCGTGAVKVNAIRNIAGQIANKDSLHG 120
Query: 457 LILILQSPITSQAQKAVELFSFKVDIFDITDLIVNITKHVLKPKHQVLTXXXXXXXXXKY 278
LILI+Q+ IT+QA KAVELFSFKV+IF ITDL+VNITKH LKP HQVLT +Y
Sbjct: 121 LILIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQY 180
Query: 277 SLDEKQLPRMLQKDAIARYYGLEKGQVVKVTYNGEITESHVTYRCVW 137
S++EKQLPRML+ DAIARYYGLEKGQVVKVTY+G++T +H+TYRCVW
Sbjct: 181 SIEEKQLPRMLRTDAIARYYGLEKGQVVKVTYDGDMTRAHITYRCVW 227
>ref|XP_004303601.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC1-like isoform 1 [Fragaria vesca subsp. vesca]
Length = 225
Score = 292 bits (747), Expect = 1e-76
Identities = 144/221 (65%), Positives = 183/221 (82%), Gaps = 2/221 (0%)
Frame = -2
Query: 793 DGNGG--VSGTCLSSYIDEGSVESNRYYLSRRTVLEMLRDRGYTVPTNEIDLSLQEFRSI 620
+GNG V+G CLS ++D+GS ES+RY+LSRRTVLEMLRDRGY+VP++EIDLSLQ+FRS+
Sbjct: 5 NGNGDEVVAGPCLSGFVDDGSTESHRYFLSRRTVLEMLRDRGYSVPSSEIDLSLQDFRSL 64
Query: 619 YGQKPDPDRFRITTSLRSDPSNKVLVIFLGTGVVKVNVIRSLATQIVHKESLNRLILILQ 440
+GQ PD DR +T SDPS ++LVI+ G G+VKVNVIR L +QI +K++L+ LILILQ
Sbjct: 65 HGQNPDADRLCFSTVHSSDPSERMLVIYCGPGIVKVNVIRGLHSQIANKDTLSGLILILQ 124
Query: 439 SPITSQAQKAVELFSFKVDIFDITDLIVNITKHVLKPKHQVLTXXXXXXXXXKYSLDEKQ 260
ITSQA K ++L+ FKV+IF ITDL+VNITKHVLKP+HQVLT K++++EKQ
Sbjct: 125 GQITSQALKTLDLYPFKVEIFQITDLLVNITKHVLKPQHQVLTEQAKQALLKKFNIEEKQ 184
Query: 259 LPRMLQKDAIARYYGLEKGQVVKVTYNGEITESHVTYRCVW 137
LPR+ QKDAIA+YYGLE+GQVVKVTY+G+IT+ HVTYRCVW
Sbjct: 185 LPRISQKDAIAKYYGLERGQVVKVTYSGDITKGHVTYRCVW 225
>ref|XP_007162116.1| hypothetical protein PHAVU_001G125200g [Phaseolus vulgaris]
gi|561035580|gb|ESW34110.1| hypothetical protein
PHAVU_001G125200g [Phaseolus vulgaris]
Length = 242
Score = 290 bits (743), Expect = 4e-76
Identities = 140/210 (66%), Positives = 178/210 (84%)
Frame = -2
Query: 766 CLSSYIDEGSVESNRYYLSRRTVLEMLRDRGYTVPTNEIDLSLQEFRSIYGQKPDPDRFR 587
CLS +ID+G+VES+RYYLSRRT LEML+DRGY++P+NEIDLSL +FR ++G PDPDR R
Sbjct: 33 CLSKFIDDGTVESHRYYLSRRTTLEMLKDRGYSIPSNEIDLSLSQFRHMHGHSPDPDRLR 92
Query: 586 ITTSLRSDPSNKVLVIFLGTGVVKVNVIRSLATQIVHKESLNRLILILQSPITSQAQKAV 407
++ + ++PS ++LVIF G GVVKV IR++A QIV++++L+ LILI+++ +TSQA KAV
Sbjct: 93 LSLAHATNPSKRILVIFCGPGVVKVTAIRNIAGQIVNRDTLSGLILIVENHVTSQALKAV 152
Query: 406 ELFSFKVDIFDITDLIVNITKHVLKPKHQVLTXXXXXXXXXKYSLDEKQLPRMLQKDAIA 227
LFSFKV+IF ITDL+VNITKHVLKPKHQVLT K++++EKQLPRMLQ DAIA
Sbjct: 153 GLFSFKVEIFQITDLLVNITKHVLKPKHQVLTDRQKKNLLKKFNIEEKQLPRMLQTDAIA 212
Query: 226 RYYGLEKGQVVKVTYNGEITESHVTYRCVW 137
RYYGLE+GQVVKVTY+GEIT+ HVTYRCVW
Sbjct: 213 RYYGLERGQVVKVTYSGEITQMHVTYRCVW 242
>ref|XP_002323257.2| hypothetical protein POPTR_0016s03800g [Populus trichocarpa]
gi|550320761|gb|EEF05018.2| hypothetical protein
POPTR_0016s03800g [Populus trichocarpa]
Length = 243
Score = 290 bits (742), Expect = 5e-76
Identities = 138/212 (65%), Positives = 177/212 (83%)
Frame = -2
Query: 772 GTCLSSYIDEGSVESNRYYLSRRTVLEMLRDRGYTVPTNEIDLSLQEFRSIYGQKPDPDR 593
G CLSS++DEGS ES+RYYLSRRTVLEML+DRGY+VP++EID+SLQ+FR +YGQ PD +
Sbjct: 32 GRCLSSFVDEGSTESHRYYLSRRTVLEMLKDRGYSVPSSEIDISLQDFRGVYGQNPDIEL 91
Query: 592 FRITTSLRSDPSNKVLVIFLGTGVVKVNVIRSLATQIVHKESLNRLILILQSPITSQAQK 413
+ + + +SDPS ++LVIF G GVVKV +IR + QI ++SL LIL+LQ+ IT+QA K
Sbjct: 92 LKFSATHKSDPSKRMLVIFCGLGVVKVGMIRLITVQITDRDSLTGLILVLQNNITNQAMK 151
Query: 412 AVELFSFKVDIFDITDLIVNITKHVLKPKHQVLTXXXXXXXXXKYSLDEKQLPRMLQKDA 233
A++LF FK++IF ITDL+VNITKH+LKPKHQVL+ KYS++EKQLPR+L+KDA
Sbjct: 152 ALDLFKFKIEIFQITDLLVNITKHILKPKHQVLSEQAKQRLLKKYSIEEKQLPRLLKKDA 211
Query: 232 IARYYGLEKGQVVKVTYNGEITESHVTYRCVW 137
I+RYYGLE+GQVVKVTY+G+IT SHVTYRCVW
Sbjct: 212 ISRYYGLERGQVVKVTYDGDITGSHVTYRCVW 243
>ref|NP_001236527.1| uncharacterized protein LOC100306033 [Glycine max]
gi|255627335|gb|ACU14012.1| unknown [Glycine max]
Length = 237
Score = 288 bits (737), Expect = 2e-75
Identities = 140/210 (66%), Positives = 175/210 (83%)
Frame = -2
Query: 766 CLSSYIDEGSVESNRYYLSRRTVLEMLRDRGYTVPTNEIDLSLQEFRSIYGQKPDPDRFR 587
CLS ++D GSVES+RYYLSRRT LEML+DRGY++P++EIDLSL +FR I+GQ PDPDR R
Sbjct: 28 CLSKFVDNGSVESHRYYLSRRTTLEMLKDRGYSIPSHEIDLSLSDFRDIHGQFPDPDRLR 87
Query: 586 ITTSLRSDPSNKVLVIFLGTGVVKVNVIRSLATQIVHKESLNRLILILQSPITSQAQKAV 407
++ + ++ S ++LVIF G GVVKV IR+ A QI+++++L LILI+++ ITSQA KAV
Sbjct: 88 LSLTHATNSSKRILVIFCGPGVVKVTAIRNTAGQIINRDTLTGLILIVENHITSQALKAV 147
Query: 406 ELFSFKVDIFDITDLIVNITKHVLKPKHQVLTXXXXXXXXXKYSLDEKQLPRMLQKDAIA 227
LFSFKV+IF ITDL+VNITKHVLKPKHQVLT KY+++EKQLPRMLQ DAIA
Sbjct: 148 NLFSFKVEIFQITDLLVNITKHVLKPKHQVLTDKQKINLLKKYNIEEKQLPRMLQTDAIA 207
Query: 226 RYYGLEKGQVVKVTYNGEITESHVTYRCVW 137
RYYGLE+GQVVKVTY+GE+T+ HVTYRCVW
Sbjct: 208 RYYGLERGQVVKVTYSGEVTQMHVTYRCVW 237
>ref|XP_004493418.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC1-like [Cicer arietinum]
Length = 244
Score = 287 bits (735), Expect = 3e-75
Identities = 143/212 (67%), Positives = 171/212 (80%)
Frame = -2
Query: 772 GTCLSSYIDEGSVESNRYYLSRRTVLEMLRDRGYTVPTNEIDLSLQEFRSIYGQKPDPDR 593
G CL + ID+GSVES+RYYLSRRT LEML+DRGY++P +EI LSL EFR +G PD DR
Sbjct: 33 GKCLITKIDDGSVESHRYYLSRRTTLEMLKDRGYSIPPSEIQLSLHEFRQTHGHSPDVDR 92
Query: 592 FRITTSLRSDPSNKVLVIFLGTGVVKVNVIRSLATQIVHKESLNRLILILQSPITSQAQK 413
R T + ++PS ++LVIF G G+VKVNV+R++A QIV++++L LILI+QS ITSQA K
Sbjct: 93 LRFTATHTTNPSKRILVIFSGPGIVKVNVVRNIAGQIVNRDTLTGLILIVQSQITSQALK 152
Query: 412 AVELFSFKVDIFDITDLIVNITKHVLKPKHQVLTXXXXXXXXXKYSLDEKQLPRMLQKDA 233
AV L SFKV+IF ITDL+VNITKHVLKPKHQVLT KY++ EKQLPRMLQ DA
Sbjct: 153 AVNLLSFKVEIFQITDLLVNITKHVLKPKHQVLTDKQKKNLLKKYNIQEKQLPRMLQTDA 212
Query: 232 IARYYGLEKGQVVKVTYNGEITESHVTYRCVW 137
IARYYGLE+GQVVKVTY GEIT+ HVTYRCVW
Sbjct: 213 IARYYGLERGQVVKVTYTGEITQMHVTYRCVW 244
>ref|XP_003625033.1| DNA-directed RNA polymerases I, II, and III subunit RPABC1
[Medicago truncatula] gi|124359979|gb|ABN07995.1| RNA
polymerase subunit, RPB5; RNA polymerase Rpb5,
N-terminal [Medicago truncatula]
gi|355500048|gb|AES81251.1| DNA-directed RNA polymerases
I, II, and III subunit RPABC1 [Medicago truncatula]
Length = 248
Score = 281 bits (720), Expect = 2e-73
Identities = 139/210 (66%), Positives = 169/210 (80%)
Frame = -2
Query: 766 CLSSYIDEGSVESNRYYLSRRTVLEMLRDRGYTVPTNEIDLSLQEFRSIYGQKPDPDRFR 587
CL + D GS+ES+RYYLSRRTVLEML+DRGY++P++EI LSL +FR I+GQ PD DR R
Sbjct: 39 CLFTKKDNGSIESHRYYLSRRTVLEMLKDRGYSIPSDEIQLSLDDFRQIHGQSPDVDRLR 98
Query: 586 ITTSLRSDPSNKVLVIFLGTGVVKVNVIRSLATQIVHKESLNRLILILQSPITSQAQKAV 407
+T + ++PS ++LV+F G G+VKVN +R +A QIV++ESL LILI+Q+ ITSQA KAV
Sbjct: 99 LTATHATNPSKRILVVFSGPGIVKVNGVRDIAGQIVNRESLTGLILIVQNQITSQALKAV 158
Query: 406 ELFSFKVDIFDITDLIVNITKHVLKPKHQVLTXXXXXXXXXKYSLDEKQLPRMLQKDAIA 227
L SFKV+IF ITDL+VN TKHVLKPKHQVLT KY + EKQLPRMLQ DAIA
Sbjct: 159 NLLSFKVEIFQITDLLVNATKHVLKPKHQVLTDKQKKNLLKKYDIQEKQLPRMLQTDAIA 218
Query: 226 RYYGLEKGQVVKVTYNGEITESHVTYRCVW 137
RYYGL++GQVVKVTY GEIT+ HVTYRCVW
Sbjct: 219 RYYGLQRGQVVKVTYTGEITQMHVTYRCVW 248
>ref|XP_006347844.1| PREDICTED: DNA-directed RNA polymerase V subunit 5A-like [Solanum
tuberosum]
Length = 227
Score = 280 bits (717), Expect = 4e-73
Identities = 141/227 (62%), Positives = 181/227 (79%), Gaps = 1/227 (0%)
Frame = -2
Query: 814 MDGNGYADGNGGVS-GTCLSSYIDEGSVESNRYYLSRRTVLEMLRDRGYTVPTNEIDLSL 638
MD NG A V+ CL+S++D+G+VES+RY+L+R+T+LEML+DRG+ +P +EID +L
Sbjct: 1 MDVNGSAMEVDVVNVSPCLASFVDDGTVESHRYFLARKTMLEMLKDRGFAIPNSEIDTTL 60
Query: 637 QEFRSIYGQKPDPDRFRITTSLRSDPSNKVLVIFLGTGVVKVNVIRSLATQIVHKESLNR 458
QEFR YGQ+PD +R RI+ R+D +NKVLVIF G VK+NVIRS+ +QI++KESL+R
Sbjct: 61 QEFREKYGQRPDAERLRISAMHRTDLTNKVLVIFCGPNSVKMNVIRSILSQIMNKESLSR 120
Query: 457 LILILQSPITSQAQKAVELFSFKVDIFDITDLIVNITKHVLKPKHQVLTXXXXXXXXXKY 278
LILI+++P+T+ A K VE FK +IF ITDL+VNITKHVLKPKH++LT KY
Sbjct: 121 LILIIENPMTNPAMKVVEDSPFKTEIFQITDLLVNITKHVLKPKHELLTNTEKEQLLKKY 180
Query: 277 SLDEKQLPRMLQKDAIARYYGLEKGQVVKVTYNGEITESHVTYRCVW 137
+L++KQLPRM QKDAIARYYGLEKGQVVKVTYN EI E+HVTYRCVW
Sbjct: 181 NLEDKQLPRMSQKDAIARYYGLEKGQVVKVTYNNEIIETHVTYRCVW 227
>gb|EXB41191.1| DNA-directed RNA polymerases I, II, and III subunit RPABC1 [Morus
notabilis]
Length = 231
Score = 280 bits (715), Expect = 7e-73
Identities = 141/231 (61%), Positives = 180/231 (77%), Gaps = 5/231 (2%)
Frame = -2
Query: 814 MDGNGYADGNGG-----VSGTCLSSYIDEGSVESNRYYLSRRTVLEMLRDRGYTVPTNEI 650
M+ NG + G GG GTCLSS ID+GSVES+RY+LSR T+LEML+DRGY+VP+++I
Sbjct: 1 MEENGGSSGGGGEPNGETLGTCLSSLIDKGSVESHRYFLSRITLLEMLKDRGYSVPSSDI 60
Query: 649 DLSLQEFRSIYGQKPDPDRFRITTSLRSDPSNKVLVIFLGTGVVKVNVIRSLATQIVHKE 470
+LSL +FR IYGQ PD DR R + + SDPS ++LVIF GVVKV +R +A QIV++
Sbjct: 61 NLSLHDFRQIYGQIPDVDRLRFSVTHLSDPSKRILVIFCEPGVVKVTSVRGIAGQIVNRN 120
Query: 469 SLNRLILILQSPITSQAQKAVELFSFKVDIFDITDLIVNITKHVLKPKHQVLTXXXXXXX 290
+L LIL+LQS +T+QAQKAVEL FKV+IF ITDL++NITKH+L+PKH+VLT
Sbjct: 121 TLTGLILVLQSQMTNQAQKAVELLPFKVEIFQITDLLINITKHLLRPKHRVLTDQEKQKL 180
Query: 289 XXKYSLDEKQLPRMLQKDAIARYYGLEKGQVVKVTYNGEITESHVTYRCVW 137
KYS++ KQLPRM + DAIARYYGLEKGQVVK+ Y+G IT+S++TYRCVW
Sbjct: 181 LKKYSIEVKQLPRMSKNDAIARYYGLEKGQVVKIIYSGGITDSYITYRCVW 231
>gb|AFK43162.1| unknown [Medicago truncatula]
Length = 248
Score = 279 bits (714), Expect = 9e-73
Identities = 138/210 (65%), Positives = 168/210 (80%)
Frame = -2
Query: 766 CLSSYIDEGSVESNRYYLSRRTVLEMLRDRGYTVPTNEIDLSLQEFRSIYGQKPDPDRFR 587
CL + D GS+ES+RYYLSRRTVLEML+DRGY++P++EI LSL +FR I+GQ PD DR R
Sbjct: 39 CLFTKKDNGSIESHRYYLSRRTVLEMLKDRGYSIPSDEIQLSLDDFRQIHGQSPDVDRLR 98
Query: 586 ITTSLRSDPSNKVLVIFLGTGVVKVNVIRSLATQIVHKESLNRLILILQSPITSQAQKAV 407
+T + ++PS ++LV+F G G+VKVN +R +A QIV++ESL LILI+Q+ ITSQA KAV
Sbjct: 99 LTATHATNPSKRILVVFSGPGIVKVNGVRDIAGQIVNRESLTGLILIVQNQITSQALKAV 158
Query: 406 ELFSFKVDIFDITDLIVNITKHVLKPKHQVLTXXXXXXXXXKYSLDEKQLPRMLQKDAIA 227
L SFKV+I ITDL+VN TKHVLKPKHQVLT KY + EKQLPRMLQ DAIA
Sbjct: 159 NLLSFKVEILQITDLLVNATKHVLKPKHQVLTDKQKKNLLKKYDIQEKQLPRMLQTDAIA 218
Query: 226 RYYGLEKGQVVKVTYNGEITESHVTYRCVW 137
RYYGL++GQVVKVTY GEIT+ HVTYRCVW
Sbjct: 219 RYYGLQRGQVVKVTYTGEITQMHVTYRCVW 248
>ref|XP_004230150.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC1-like [Solanum lycopersicum]
Length = 227
Score = 277 bits (708), Expect = 5e-72
Identities = 139/227 (61%), Positives = 180/227 (79%), Gaps = 1/227 (0%)
Frame = -2
Query: 814 MDGNGYADGNGGVS-GTCLSSYIDEGSVESNRYYLSRRTVLEMLRDRGYTVPTNEIDLSL 638
MD NG A V+ CL+S++D+G+VES+RY+L+R+T+LEML+DRG+ +P +EI+ +L
Sbjct: 1 MDVNGSAMEVDVVNVSPCLTSFVDDGTVESHRYFLARKTMLEMLKDRGFAIPNSEIETTL 60
Query: 637 QEFRSIYGQKPDPDRFRITTSLRSDPSNKVLVIFLGTGVVKVNVIRSLATQIVHKESLNR 458
QEFR YGQ+PD +R RI+ R+D +NKVLVIF G VK+NVIR++ +QI++KESL+R
Sbjct: 61 QEFREKYGQRPDVERLRISAMHRTDLTNKVLVIFCGPNSVKMNVIRNILSQIMNKESLSR 120
Query: 457 LILILQSPITSQAQKAVELFSFKVDIFDITDLIVNITKHVLKPKHQVLTXXXXXXXXXKY 278
LILI+++P+T+ A K VE FK +IF ITDL+VNITKHVLKPKH++LT KY
Sbjct: 121 LILIIENPMTNPAMKVVEDSPFKTEIFQITDLLVNITKHVLKPKHELLTNAEKEQLLKKY 180
Query: 277 SLDEKQLPRMLQKDAIARYYGLEKGQVVKVTYNGEITESHVTYRCVW 137
+L+EKQLPRM QKDAIARYYGLEKGQVVKVTYN EI E+H TYRCVW
Sbjct: 181 NLEEKQLPRMSQKDAIARYYGLEKGQVVKVTYNNEIIETHATYRCVW 227
>ref|XP_006402913.1| hypothetical protein EUTSA_v10006218mg [Eutrema salsugineum]
gi|557104012|gb|ESQ44366.1| hypothetical protein
EUTSA_v10006218mg [Eutrema salsugineum]
Length = 234
Score = 271 bits (693), Expect = 3e-70
Identities = 133/230 (57%), Positives = 175/230 (76%)
Frame = -2
Query: 826 KEAEMDGNGYADGNGGVSGTCLSSYIDEGSVESNRYYLSRRTVLEMLRDRGYTVPTNEID 647
++A G+G G+G G CLS Y D S ES+RYYL+RR L MLRDRGY V +I+
Sbjct: 7 EKAPATGSGSGPGSG--RGMCLSKYEDPMSEESHRYYLARRNALMMLRDRGYEVSAEDIN 64
Query: 646 LSLQEFRSIYGQKPDPDRFRITTSLRSDPSNKVLVIFLGTGVVKVNVIRSLATQIVHKES 467
LSLQ+FR++YG+ PD +R RI+ LRSD S KV V+F GTG+VKVN IR++A ++ +E+
Sbjct: 65 LSLQDFRTVYGEHPDVNRLRISAQLRSDSSKKVKVVFFGTGMVKVNAIRTVAADVLSQET 124
Query: 466 LNRLILILQSPITSQAQKAVELFSFKVDIFDITDLIVNITKHVLKPKHQVLTXXXXXXXX 287
++ LI++LQ+ +T+QA KA+ELFSFKV+IF ITDL+VNIT HVLKPKH+VL
Sbjct: 125 ISGLIMVLQNHVTNQALKAIELFSFKVEIFQITDLLVNITNHVLKPKHRVLNDKEKTALL 184
Query: 286 XKYSLDEKQLPRMLQKDAIARYYGLEKGQVVKVTYNGEITESHVTYRCVW 137
K++++EKQLPR+ +KDA+ RYYGLEKGQVVKV Y G++TESHV YRCVW
Sbjct: 185 KKFNIEEKQLPRISKKDAVVRYYGLEKGQVVKVNYRGQLTESHVAYRCVW 234