BLASTX nr result
ID: Paeonia25_contig00018991
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Paeonia25_contig00018991
(479 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN82568.1| hypothetical protein VITISV_040047 [Vitis vinifera] 247 1e-63
ref|XP_002281315.1| PREDICTED: RNA-dependent RNA polymerase 1-li... 244 7e-63
ref|XP_002284914.1| PREDICTED: RNA-dependent RNA polymerase 1 [V... 238 9e-61
emb|CAN82339.1| hypothetical protein VITISV_039922 [Vitis vinifera] 238 9e-61
ref|XP_007045552.1| RNA-dependent RNA polymerase 1 isoform 1 [Th... 235 4e-60
ref|XP_006469265.1| PREDICTED: RNA-dependent RNA polymerase 1-li... 234 9e-60
ref|XP_002870481.1| RNA-dependent RNA polymerase 1 [Arabidopsis ... 234 9e-60
gb|AHL27585.1| RNA-dependent RNA polymerase 2 [Salvia miltiorrhiza] 234 1e-59
ref|XP_006366108.1| PREDICTED: RNA-dependent RNA polymerase 1-li... 234 1e-59
ref|XP_002892830.1| RNA-dependent RNA polymerase 1 [Arabidopsis ... 234 1e-59
gb|AAT38754.2| RNA-directed RNA polymerase, putative [Solanum de... 234 1e-59
emb|CCD74482.1| RNA-dependent RNA polymerase 1 [Arabidopsis hall... 233 2e-59
gb|ABE01124.1| RNA-dependent RNA polymerase [Gossypium hirsutum] 233 3e-59
gb|ABO93004.1| putative RNA-dependent RNA-polymerase [Solanum tu... 233 3e-59
gb|ABO93006.1| putative RNA-dependent RNA-polymerase [Solanum tu... 233 3e-59
gb|AAT38751.2| RNA-directed RNA polymerase, putative [Solanum de... 233 3e-59
gb|ABI34311.1| RNA dependent RNA polymerase family protein [Sola... 233 3e-59
ref|XP_006416969.1| hypothetical protein EUTSA_v10006629mg [Eutr... 232 4e-59
ref|XP_002311536.1| RNA-directed RNA Polymerase family protein [... 232 4e-59
gb|ABQ45352.1| RNA-dependent RNA polymerase [Gossypium hirsutum] 232 4e-59
>emb|CAN82568.1| hypothetical protein VITISV_040047 [Vitis vinifera]
Length = 697
Score = 247 bits (630), Expect = 1e-63
Identities = 129/163 (79%), Positives = 140/163 (85%), Gaps = 4/163 (2%)
Frame = +2
Query: 2 SKETLSVCRDEIEIIPDIEVK----TYVFSDGIGKISAQFAQGVAIKCGLESSTPSAFQI 169
SKETL V + EIEIIPDIE+ TYVFSDGIGKISA+ A VAIKCG +SSTPSAFQI
Sbjct: 40 SKETLKVAKHEIEIIPDIEIHRDGTTYVFSDGIGKISAELAHRVAIKCGCKSSTPSAFQI 99
Query: 170 RYGGYKGVVAVDPKSFVKLSLRRSMSKYESENTKLDVLAWSKFQPCFLNRQLITLLSTLG 349
RYGGYKGVVAVDP S KLSLR+SM KYESENT LDVL+WSK++PCFLNRQLITLLSTLG
Sbjct: 100 RYGGYKGVVAVDPTSSRKLSLRKSMFKYESENTNLDVLSWSKYRPCFLNRQLITLLSTLG 159
Query: 350 VRDFVFEKKQSEVIVQLDAILKDPLRAQDALELMSLGENTNIL 478
V+D VFEKKQ E + QLD ILKDPLRAQ+ALELMS GENTNIL
Sbjct: 160 VKDHVFEKKQREAVDQLDTILKDPLRAQEALELMSPGENTNIL 202
>ref|XP_002281315.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Vitis vinifera]
Length = 1109
Score = 244 bits (624), Expect = 7e-63
Identities = 128/163 (78%), Positives = 139/163 (85%), Gaps = 4/163 (2%)
Frame = +2
Query: 2 SKETLSVCRDEIEIIPDIEVK----TYVFSDGIGKISAQFAQGVAIKCGLESSTPSAFQI 169
SKETL V + EIEIIPDIE TYVFSDGIGKISA+ A VAIKCG ++STPSAFQI
Sbjct: 496 SKETLKVAKHEIEIIPDIETHRDGTTYVFSDGIGKISAELAHRVAIKCGCKNSTPSAFQI 555
Query: 170 RYGGYKGVVAVDPKSFVKLSLRRSMSKYESENTKLDVLAWSKFQPCFLNRQLITLLSTLG 349
RYGGYKGVVAVDP S KLSLR+SM KYESENT LDVL+WSK++PCFLNRQLITLLSTLG
Sbjct: 556 RYGGYKGVVAVDPTSSRKLSLRKSMFKYESENTNLDVLSWSKYRPCFLNRQLITLLSTLG 615
Query: 350 VRDFVFEKKQSEVIVQLDAILKDPLRAQDALELMSLGENTNIL 478
V+D VFEKKQ E + QLD ILKDPLRAQ+ALELMS GENTNIL
Sbjct: 616 VKDHVFEKKQREAVDQLDTILKDPLRAQEALELMSPGENTNIL 658
>ref|XP_002284914.1| PREDICTED: RNA-dependent RNA polymerase 1 [Vitis vinifera]
Length = 1121
Score = 238 bits (606), Expect = 9e-61
Identities = 125/163 (76%), Positives = 136/163 (83%), Gaps = 4/163 (2%)
Frame = +2
Query: 2 SKETLSVCRDEIEIIPDIEVK----TYVFSDGIGKISAQFAQGVAIKCGLESSTPSAFQI 169
SKETL V +DEIE IPDIE+ TYVFSDGIGKIS Q A VAIKCG +SSTPSAFQI
Sbjct: 498 SKETLKVAKDEIENIPDIEIHKGRTTYVFSDGIGKISPQLAHRVAIKCGCKSSTPSAFQI 557
Query: 170 RYGGYKGVVAVDPKSFVKLSLRRSMSKYESENTKLDVLAWSKFQPCFLNRQLITLLSTLG 349
RYGGYKGVVAVDP S KLSLR+SM KYES+NT LDVLAWSK+QP FLNRQLITLLSTLG
Sbjct: 558 RYGGYKGVVAVDPTSSRKLSLRKSMFKYESDNTNLDVLAWSKYQPSFLNRQLITLLSTLG 617
Query: 350 VRDFVFEKKQSEVIVQLDAILKDPLRAQDALELMSLGENTNIL 478
V+D VFEKKQ + QLD ILKDP+ AQ+ALELMS GENTN+L
Sbjct: 618 VKDHVFEKKQRAAVDQLDTILKDPVAAQEALELMSPGENTNVL 660
>emb|CAN82339.1| hypothetical protein VITISV_039922 [Vitis vinifera]
Length = 654
Score = 238 bits (606), Expect = 9e-61
Identities = 125/163 (76%), Positives = 136/163 (83%), Gaps = 4/163 (2%)
Frame = +2
Query: 2 SKETLSVCRDEIEIIPDIEVK----TYVFSDGIGKISAQFAQGVAIKCGLESSTPSAFQI 169
SKETL V +DEIE IPDIE+ TYVFSDGIGKIS Q A VAIKCG +SSTPSAFQI
Sbjct: 40 SKETLKVAKDEIENIPDIEIHKXRTTYVFSDGIGKISPQLAHRVAIKCGCKSSTPSAFQI 99
Query: 170 RYGGYKGVVAVDPKSFVKLSLRRSMSKYESENTKLDVLAWSKFQPCFLNRQLITLLSTLG 349
RYGGYKGVVAVDP S KLSLR+SM KYES+NT LDVLAWSK+QP FLNRQLITLLSTLG
Sbjct: 100 RYGGYKGVVAVDPTSSRKLSLRKSMFKYESDNTNLDVLAWSKYQPSFLNRQLITLLSTLG 159
Query: 350 VRDFVFEKKQSEVIVQLDAILKDPLRAQDALELMSLGENTNIL 478
V+D VFEKKQ + QLD ILKDP+ AQ+ALELMS GENTN+L
Sbjct: 160 VKDHVFEKKQRAAVDQLDTILKDPVAAQEALELMSPGENTNVL 202
>ref|XP_007045552.1| RNA-dependent RNA polymerase 1 isoform 1 [Theobroma cacao]
gi|590697846|ref|XP_007045553.1| RNA-dependent RNA
polymerase 1 isoform 1 [Theobroma cacao]
gi|590697850|ref|XP_007045554.1| RNA-dependent RNA
polymerase 1 isoform 1 [Theobroma cacao]
gi|508709487|gb|EOY01384.1| RNA-dependent RNA polymerase
1 isoform 1 [Theobroma cacao]
gi|508709488|gb|EOY01385.1| RNA-dependent RNA polymerase
1 isoform 1 [Theobroma cacao]
gi|508709489|gb|EOY01386.1| RNA-dependent RNA polymerase
1 isoform 1 [Theobroma cacao]
Length = 1109
Score = 235 bits (600), Expect = 4e-60
Identities = 125/163 (76%), Positives = 137/163 (84%), Gaps = 4/163 (2%)
Frame = +2
Query: 2 SKETLSVCRDEIEIIPDIEVK----TYVFSDGIGKISAQFAQGVAIKCGLESSTPSAFQI 169
S ETLSV +DEIEII D+E+K YVFSDGIGKISA+FA+ VA KC L TPSAFQI
Sbjct: 502 STETLSVAKDEIEIIDDVEIKRDGINYVFSDGIGKISAKFAKKVAAKCRLNGRTPSAFQI 561
Query: 170 RYGGYKGVVAVDPKSFVKLSLRRSMSKYESENTKLDVLAWSKFQPCFLNRQLITLLSTLG 349
R GG+KGVVAVDP S KLSLR SMSKYESENTKLDVLAWSK+QPCFLNRQLITLLSTLG
Sbjct: 562 RIGGFKGVVAVDPTSSKKLSLRGSMSKYESENTKLDVLAWSKYQPCFLNRQLITLLSTLG 621
Query: 350 VRDFVFEKKQSEVIVQLDAILKDPLRAQDALELMSLGENTNIL 478
V D FE+KQ EV+ QL+AIL DPL+AQ+ALELMS GENTNIL
Sbjct: 622 VPDHAFEEKQREVVDQLNAILTDPLKAQEALELMSPGENTNIL 664
>ref|XP_006469265.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Citrus sinensis]
Length = 1132
Score = 234 bits (597), Expect = 9e-60
Identities = 122/163 (74%), Positives = 138/163 (84%), Gaps = 4/163 (2%)
Frame = +2
Query: 2 SKETLSVCRDEIEIIPDIEVKT----YVFSDGIGKISAQFAQGVAIKCGLESSTPSAFQI 169
SKETLSV DEIEIIPD++++ YVFSDGIGK+SA+FA+ VA KCGL+ + PSAFQI
Sbjct: 513 SKETLSVHMDEIEIIPDVKIEIGKTKYVFSDGIGKVSAEFARKVASKCGLKDNPPSAFQI 572
Query: 170 RYGGYKGVVAVDPKSFVKLSLRRSMSKYESENTKLDVLAWSKFQPCFLNRQLITLLSTLG 349
RYGGYKGVVA DP S KLSLR SM KYESE TKLDVLAWSK+QPCFLNRQLI+LLSTLG
Sbjct: 573 RYGGYKGVVAADPTSSKKLSLRDSMRKYESELTKLDVLAWSKYQPCFLNRQLISLLSTLG 632
Query: 350 VRDFVFEKKQSEVIVQLDAILKDPLRAQDALELMSLGENTNIL 478
+ D +FEKKQ E + QLDAIL DPL+AQ+ALELMS GENTNIL
Sbjct: 633 IWDEIFEKKQREAVRQLDAILTDPLKAQEALELMSPGENTNIL 675
>ref|XP_002870481.1| RNA-dependent RNA polymerase 1 [Arabidopsis lyrata subsp. lyrata]
gi|297316317|gb|EFH46740.1| RNA-dependent RNA polymerase
1 [Arabidopsis lyrata subsp. lyrata]
Length = 1097
Score = 234 bits (597), Expect = 9e-60
Identities = 120/163 (73%), Positives = 140/163 (85%), Gaps = 4/163 (2%)
Frame = +2
Query: 2 SKETLSVCRDEIEIIPDIEVKT----YVFSDGIGKISAQFAQGVAIKCGLESSTPSAFQI 169
S+ETL+V DEIE+IPD+E+ + YVFSDGIGKISA+FA+ VA KCGL +PSAFQI
Sbjct: 497 SRETLNVRSDEIEVIPDVEIISLGTRYVFSDGIGKISAEFARRVAKKCGLTEFSPSAFQI 556
Query: 170 RYGGYKGVVAVDPKSFVKLSLRRSMSKYESENTKLDVLAWSKFQPCFLNRQLITLLSTLG 349
RYGGYKGVVAVDP S KLSLR+SMSK+ESENTKLDVLAWSK+QPC++NRQLITLLSTLG
Sbjct: 557 RYGGYKGVVAVDPNSSKKLSLRKSMSKFESENTKLDVLAWSKYQPCYMNRQLITLLSTLG 616
Query: 350 VRDFVFEKKQSEVIVQLDAILKDPLRAQDALELMSLGENTNIL 478
++D VFEKKQ EV+ +LDAIL DPL A +AL LM+ GENTNIL
Sbjct: 617 IKDSVFEKKQREVVDRLDAILTDPLEAHEALGLMAPGENTNIL 659
>gb|AHL27585.1| RNA-dependent RNA polymerase 2 [Salvia miltiorrhiza]
Length = 1101
Score = 234 bits (596), Expect = 1e-59
Identities = 118/163 (72%), Positives = 136/163 (83%), Gaps = 4/163 (2%)
Frame = +2
Query: 2 SKETLSVCRDEIEIIPDIEV----KTYVFSDGIGKISAQFAQGVAIKCGLESSTPSAFQI 169
S ETL V + E+E IPD+EV TY+FSDGIGKIS+ FA+ VA KCG+ PSAFQI
Sbjct: 502 STETLKVAQYEVERIPDVEVVRDGTTYIFSDGIGKISSDFARRVATKCGIRDGVPSAFQI 561
Query: 170 RYGGYKGVVAVDPKSFVKLSLRRSMSKYESENTKLDVLAWSKFQPCFLNRQLITLLSTLG 349
RYGGYKGVVAVDP S +KLSLR+SM KY+S+NTKLDVL+WSK+QPCF+NRQ+ITLLSTLG
Sbjct: 562 RYGGYKGVVAVDPTSSMKLSLRKSMLKYQSDNTKLDVLSWSKYQPCFMNRQIITLLSTLG 621
Query: 350 VRDFVFEKKQSEVIVQLDAILKDPLRAQDALELMSLGENTNIL 478
VRD VFEKKQ E + QLD IL DPL+AQDAL+LMS GENTNIL
Sbjct: 622 VRDHVFEKKQREAVAQLDDILVDPLKAQDALDLMSPGENTNIL 664
>ref|XP_006366108.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Solanum tuberosum]
Length = 1115
Score = 234 bits (596), Expect = 1e-59
Identities = 124/161 (77%), Positives = 139/161 (86%), Gaps = 2/161 (1%)
Frame = +2
Query: 2 SKETLSVCRDEIEIIPDIEVK--TYVFSDGIGKISAQFAQGVAIKCGLESSTPSAFQIRY 175
SKETLSV R EIEIIPD++V +YVFSDGIGKISA FA+ VA KCGL+ TPSAFQIRY
Sbjct: 498 SKETLSVLRHEIEIIPDVKVHGTSYVFSDGIGKISADFARRVASKCGLQY-TPSAFQIRY 556
Query: 176 GGYKGVVAVDPKSFVKLSLRRSMSKYESENTKLDVLAWSKFQPCFLNRQLITLLSTLGVR 355
GGYKGVVAVDP S +KLSLR+SMSKYES+N KLDVL WSK+QPCFLNRQL+TLLSTLGV+
Sbjct: 557 GGYKGVVAVDPYSSMKLSLRKSMSKYESDNNKLDVLEWSKYQPCFLNRQLVTLLSTLGVK 616
Query: 356 DFVFEKKQSEVIVQLDAILKDPLRAQDALELMSLGENTNIL 478
D V E+KQ E + QLDAIL D L+AQ+ALELMS GENTNIL
Sbjct: 617 DDVLEQKQKEAVDQLDAILHDSLKAQEALELMSPGENTNIL 657
>ref|XP_002892830.1| RNA-dependent RNA polymerase 1 [Arabidopsis lyrata subsp. lyrata]
gi|297338672|gb|EFH69089.1| RNA-dependent RNA polymerase
1 [Arabidopsis lyrata subsp. lyrata]
Length = 1107
Score = 234 bits (596), Expect = 1e-59
Identities = 121/163 (74%), Positives = 139/163 (85%), Gaps = 4/163 (2%)
Frame = +2
Query: 2 SKETLSVCRDEIEIIPDIEVKT----YVFSDGIGKISAQFAQGVAIKCGLESSTPSAFQI 169
S+ETL+V DEIE+IPD+E+ + YVFSDGIGKISA+FA+ VA KCGL +PSAFQI
Sbjct: 507 SRETLNVRSDEIEVIPDVEIISLGTRYVFSDGIGKISAEFARRVAKKCGLTEFSPSAFQI 566
Query: 170 RYGGYKGVVAVDPKSFVKLSLRRSMSKYESENTKLDVLAWSKFQPCFLNRQLITLLSTLG 349
RYGGYKGVVAVDP S KLSLR+SMSK+ESENTKLDVLAWSK+QPC++NRQLITLLSTLG
Sbjct: 567 RYGGYKGVVAVDPNSSKKLSLRKSMSKFESENTKLDVLAWSKYQPCYMNRQLITLLSTLG 626
Query: 350 VRDFVFEKKQSEVIVQLDAILKDPLRAQDALELMSLGENTNIL 478
V D VFEKKQ EV+ +LDAIL DPL A +AL LM+ GENTNIL
Sbjct: 627 VEDSVFEKKQREVVDRLDAILTDPLEAHEALGLMAPGENTNIL 669
>gb|AAT38754.2| RNA-directed RNA polymerase, putative [Solanum demissum]
Length = 1021
Score = 234 bits (596), Expect = 1e-59
Identities = 123/161 (76%), Positives = 139/161 (86%), Gaps = 2/161 (1%)
Frame = +2
Query: 2 SKETLSVCRDEIEIIPDIEVK--TYVFSDGIGKISAQFAQGVAIKCGLESSTPSAFQIRY 175
SKETLSV R EIE+IPD++V +YVFSDGIGKISA FA+ VA KCGL+ TPSAFQIRY
Sbjct: 346 SKETLSVLRHEIEVIPDVKVHGTSYVFSDGIGKISADFARRVASKCGLQY-TPSAFQIRY 404
Query: 176 GGYKGVVAVDPKSFVKLSLRRSMSKYESENTKLDVLAWSKFQPCFLNRQLITLLSTLGVR 355
GGYKGVVAVDP S +KL+LR+SMSKYES+N KLDVL WSK+QPCFLNRQLITLLSTLGVR
Sbjct: 405 GGYKGVVAVDPYSSMKLTLRKSMSKYESDNNKLDVLGWSKYQPCFLNRQLITLLSTLGVR 464
Query: 356 DFVFEKKQSEVIVQLDAILKDPLRAQDALELMSLGENTNIL 478
D + E+KQ E + QLDAIL D L+AQ+ALELMS GENTNIL
Sbjct: 465 DDILEQKQKEAVDQLDAILHDSLKAQEALELMSPGENTNIL 505
>emb|CCD74482.1| RNA-dependent RNA polymerase 1 [Arabidopsis halleri subsp. halleri]
Length = 1107
Score = 233 bits (594), Expect = 2e-59
Identities = 120/163 (73%), Positives = 140/163 (85%), Gaps = 4/163 (2%)
Frame = +2
Query: 2 SKETLSVCRDEIEIIPDIEVKT----YVFSDGIGKISAQFAQGVAIKCGLESSTPSAFQI 169
S+ETL+V DEIE+IPD+E+ + YVFSDGIGKISA+FA+ VA KCGL +PSAFQI
Sbjct: 507 SRETLNVRSDEIEVIPDVEIISLGTRYVFSDGIGKISAEFARRVAKKCGLTEFSPSAFQI 566
Query: 170 RYGGYKGVVAVDPKSFVKLSLRRSMSKYESENTKLDVLAWSKFQPCFLNRQLITLLSTLG 349
RYGGYKGVVAVDP S KLSLR+SMSK+ESENTKLDVLAWSK+QPC++NRQLITLLSTLG
Sbjct: 567 RYGGYKGVVAVDPNSSKKLSLRKSMSKFESENTKLDVLAWSKYQPCYMNRQLITLLSTLG 626
Query: 350 VRDFVFEKKQSEVIVQLDAILKDPLRAQDALELMSLGENTNIL 478
V+D VF+KKQ EV+ +LDAIL DPL A +AL LM+ GENTNIL
Sbjct: 627 VKDSVFKKKQREVVDRLDAILTDPLEAHEALGLMAPGENTNIL 669
>gb|ABE01124.1| RNA-dependent RNA polymerase [Gossypium hirsutum]
Length = 1110
Score = 233 bits (593), Expect = 3e-59
Identities = 121/163 (74%), Positives = 136/163 (83%), Gaps = 4/163 (2%)
Frame = +2
Query: 2 SKETLSVCRDEIEIIPDIEVKT----YVFSDGIGKISAQFAQGVAIKCGLESSTPSAFQI 169
S ETLSV +DEI +IPDIE+ YVF DGIGKISA+FA+ VA KC L+ TPSAFQI
Sbjct: 502 STETLSVSKDEINLIPDIEIMKDGIKYVFPDGIGKISAEFAKKVAAKCRLKGCTPSAFQI 561
Query: 170 RYGGYKGVVAVDPKSFVKLSLRRSMSKYESENTKLDVLAWSKFQPCFLNRQLITLLSTLG 349
R GG+KGVVA+DP S KLSLR+SM KYESENTKLDVLAWSK+QPCFLNRQLITLLSTLG
Sbjct: 562 RIGGFKGVVAIDPTSSWKLSLRKSMEKYESENTKLDVLAWSKYQPCFLNRQLITLLSTLG 621
Query: 350 VRDFVFEKKQSEVIVQLDAILKDPLRAQDALELMSLGENTNIL 478
V D+ FEKKQ EV+ QL+A+L DPL AQ+ALELMS GENTNIL
Sbjct: 622 VPDYAFEKKQREVVDQLNALLTDPLEAQEALELMSPGENTNIL 664
>gb|ABO93004.1| putative RNA-dependent RNA-polymerase [Solanum tuberosum]
Length = 841
Score = 233 bits (593), Expect = 3e-59
Identities = 122/161 (75%), Positives = 139/161 (86%), Gaps = 2/161 (1%)
Frame = +2
Query: 2 SKETLSVCRDEIEIIPDIEVK--TYVFSDGIGKISAQFAQGVAIKCGLESSTPSAFQIRY 175
SKETLSV R EIE+IPD++V +YVFSDGIGKISA FA+ VA KCGL+ TPSAFQIRY
Sbjct: 498 SKETLSVLRHEIEVIPDVKVHGTSYVFSDGIGKISADFARRVASKCGLQY-TPSAFQIRY 556
Query: 176 GGYKGVVAVDPKSFVKLSLRRSMSKYESENTKLDVLAWSKFQPCFLNRQLITLLSTLGVR 355
GGYKGVVAVDP S +KLSLR+SMSKYES+N KLDVL WSK+QPC+LNRQL+TLLSTLGV+
Sbjct: 557 GGYKGVVAVDPYSSMKLSLRKSMSKYESDNNKLDVLGWSKYQPCYLNRQLVTLLSTLGVK 616
Query: 356 DFVFEKKQSEVIVQLDAILKDPLRAQDALELMSLGENTNIL 478
D V E+KQ E + QLDAIL D L+AQ+ALELMS GENTNIL
Sbjct: 617 DDVLEQKQKEAVDQLDAILHDSLKAQEALELMSPGENTNIL 657
>gb|ABO93006.1| putative RNA-dependent RNA-polymerase [Solanum tuberosum]
Length = 1065
Score = 233 bits (593), Expect = 3e-59
Identities = 122/161 (75%), Positives = 139/161 (86%), Gaps = 2/161 (1%)
Frame = +2
Query: 2 SKETLSVCRDEIEIIPDIEVK--TYVFSDGIGKISAQFAQGVAIKCGLESSTPSAFQIRY 175
SKETLSV R EIE+IPD++V +YVFSDGIGKISA FA+ VA KCGL+ TPSAFQIRY
Sbjct: 497 SKETLSVLRHEIEVIPDVKVHGTSYVFSDGIGKISADFARRVASKCGLQY-TPSAFQIRY 555
Query: 176 GGYKGVVAVDPKSFVKLSLRRSMSKYESENTKLDVLAWSKFQPCFLNRQLITLLSTLGVR 355
GGYKGVVAVDP S +KLSLR+SMSKYES+N KLDVL WSK+QPC+LNRQLITLLSTLGV+
Sbjct: 556 GGYKGVVAVDPYSSMKLSLRKSMSKYESDNNKLDVLGWSKYQPCYLNRQLITLLSTLGVK 615
Query: 356 DFVFEKKQSEVIVQLDAILKDPLRAQDALELMSLGENTNIL 478
D + E+KQ E + QLDAIL D L+AQ+ALELMS GENTNIL
Sbjct: 616 DDILEQKQKEAVDQLDAILHDSLKAQEALELMSPGENTNIL 656
>gb|AAT38751.2| RNA-directed RNA polymerase, putative [Solanum demissum]
Length = 1180
Score = 233 bits (593), Expect = 3e-59
Identities = 122/161 (75%), Positives = 139/161 (86%), Gaps = 2/161 (1%)
Frame = +2
Query: 2 SKETLSVCRDEIEIIPDIEVK--TYVFSDGIGKISAQFAQGVAIKCGLESSTPSAFQIRY 175
SKETLSV R EIE+IPD++V +YVFSDGIGKISA FA+ VA KCGL+ TPSAFQIRY
Sbjct: 464 SKETLSVLRHEIEVIPDVKVHGTSYVFSDGIGKISADFARRVASKCGLQY-TPSAFQIRY 522
Query: 176 GGYKGVVAVDPKSFVKLSLRRSMSKYESENTKLDVLAWSKFQPCFLNRQLITLLSTLGVR 355
GGYKGVVAVDP S +KLSLR+SMSKYES+N KLDVL WSK+QPC+LNRQL+TLLSTLGV+
Sbjct: 523 GGYKGVVAVDPYSSMKLSLRKSMSKYESDNNKLDVLGWSKYQPCYLNRQLVTLLSTLGVK 582
Query: 356 DFVFEKKQSEVIVQLDAILKDPLRAQDALELMSLGENTNIL 478
D V E+KQ E + QLDAIL D L+AQ+ALELMS GENTNIL
Sbjct: 583 DDVLEQKQKEAVDQLDAILHDSLKAQEALELMSPGENTNIL 623
>gb|ABI34311.1| RNA dependent RNA polymerase family protein [Solanum demissum]
Length = 963
Score = 233 bits (593), Expect = 3e-59
Identities = 123/161 (76%), Positives = 139/161 (86%), Gaps = 2/161 (1%)
Frame = +2
Query: 2 SKETLSVCRDEIEIIPDIEVK--TYVFSDGIGKISAQFAQGVAIKCGLESSTPSAFQIRY 175
SKETLSV R EIE+IPD++V +YVFSDGIGKISA FA+ VA KCGL+ TPSAFQIRY
Sbjct: 346 SKETLSVLRHEIEVIPDVKVHGTSYVFSDGIGKISADFARRVASKCGLQY-TPSAFQIRY 404
Query: 176 GGYKGVVAVDPKSFVKLSLRRSMSKYESENTKLDVLAWSKFQPCFLNRQLITLLSTLGVR 355
GGYKGVVAVDP S +KLSLR+SMSKYES+N KLDVL WSK+QPC+LNRQLITLLSTLGV+
Sbjct: 405 GGYKGVVAVDPYSSMKLSLRKSMSKYESDNNKLDVLEWSKYQPCYLNRQLITLLSTLGVK 464
Query: 356 DFVFEKKQSEVIVQLDAILKDPLRAQDALELMSLGENTNIL 478
D V E+KQ E + QLDAIL D L+AQ+ALELMS GENTNIL
Sbjct: 465 DDVLEQKQKEAVDQLDAILHDSLKAQEALELMSPGENTNIL 505
>ref|XP_006416969.1| hypothetical protein EUTSA_v10006629mg [Eutrema salsugineum]
gi|557094740|gb|ESQ35322.1| hypothetical protein
EUTSA_v10006629mg [Eutrema salsugineum]
Length = 1108
Score = 232 bits (592), Expect = 4e-59
Identities = 119/163 (73%), Positives = 139/163 (85%), Gaps = 4/163 (2%)
Frame = +2
Query: 2 SKETLSVCRDEIEIIPDIEVK----TYVFSDGIGKISAQFAQGVAIKCGLESSTPSAFQI 169
S+ETL+V DEIE+IPD+E+ YVFSDGIGKIS++FA+ VA KCGL TPSAFQI
Sbjct: 506 SRETLNVRTDEIEVIPDVEITYLGTRYVFSDGIGKISSEFARRVAKKCGLTEFTPSAFQI 565
Query: 170 RYGGYKGVVAVDPKSFVKLSLRRSMSKYESENTKLDVLAWSKFQPCFLNRQLITLLSTLG 349
RYGGYKGVVAVD S+ KLSLR+SMSK+ES+NTKLDVLAWSK+QPC+LNRQLITLLSTLG
Sbjct: 566 RYGGYKGVVAVDRNSYKKLSLRKSMSKFESKNTKLDVLAWSKYQPCYLNRQLITLLSTLG 625
Query: 350 VRDFVFEKKQSEVIVQLDAILKDPLRAQDALELMSLGENTNIL 478
V+D+VFEKKQ EV+ +LDAIL DPL A +AL LM+ GENT IL
Sbjct: 626 VKDYVFEKKQREVVDKLDAILTDPLEAHEALGLMAPGENTKIL 668
>ref|XP_002311536.1| RNA-directed RNA Polymerase family protein [Populus trichocarpa]
gi|222851356|gb|EEE88903.1| RNA-directed RNA Polymerase
family protein [Populus trichocarpa]
Length = 1133
Score = 232 bits (592), Expect = 4e-59
Identities = 126/163 (77%), Positives = 135/163 (82%), Gaps = 4/163 (2%)
Frame = +2
Query: 2 SKETLSVCRDEIEIIPDIEVKT----YVFSDGIGKISAQFAQGVAIKCGLESSTPSAFQI 169
S ETLSV EIEIIPDIEV Y+FSDGIGKISA+FA+ VAIKCG + TPSAFQI
Sbjct: 509 STETLSVSSHEIEIIPDIEVSRGGTRYLFSDGIGKISAEFARKVAIKCGCKGFTPSAFQI 568
Query: 170 RYGGYKGVVAVDPKSFVKLSLRRSMSKYESENTKLDVLAWSKFQPCFLNRQLITLLSTLG 349
RY GYKGVVAVDP S KLSLRRSM KYESENTKLDVLA SK+QPCFLNRQLITLLSTLG
Sbjct: 569 RYAGYKGVVAVDPTSSKKLSLRRSMFKYESENTKLDVLAHSKYQPCFLNRQLITLLSTLG 628
Query: 350 VRDFVFEKKQSEVIVQLDAILKDPLRAQDALELMSLGENTNIL 478
V D FE+KQ E + QLDA+L DPLRAQ+ALELMS GENTNIL
Sbjct: 629 VPDHHFERKQREAVDQLDAMLTDPLRAQEALELMSPGENTNIL 671
>gb|ABQ45352.1| RNA-dependent RNA polymerase [Gossypium hirsutum]
Length = 1110
Score = 232 bits (592), Expect = 4e-59
Identities = 122/163 (74%), Positives = 136/163 (83%), Gaps = 4/163 (2%)
Frame = +2
Query: 2 SKETLSVCRDEIEIIPDIEVKT----YVFSDGIGKISAQFAQGVAIKCGLESSTPSAFQI 169
S ETLSV +DEI +IPDIE+ YVFSDGIGKISA+FA+ VA KC L+ TPSAFQI
Sbjct: 502 STETLSVSKDEINLIPDIEIMKDGIKYVFSDGIGKISAEFAKKVAAKCRLKGCTPSAFQI 561
Query: 170 RYGGYKGVVAVDPKSFVKLSLRRSMSKYESENTKLDVLAWSKFQPCFLNRQLITLLSTLG 349
R GG+KGVVA+DP S KLSLR+SM KYESENTKLDVLAWSK+QPCFLNRQLITLLSTLG
Sbjct: 562 RIGGFKGVVAIDPTSSWKLSLRKSMEKYESENTKLDVLAWSKYQPCFLNRQLITLLSTLG 621
Query: 350 VRDFVFEKKQSEVIVQLDAILKDPLRAQDALELMSLGENTNIL 478
V D FEKKQ EV+ QL+A+L DPL AQ+ALELMS GENTNIL
Sbjct: 622 VPDRAFEKKQREVVDQLNALLTDPLEAQEALELMSPGENTNIL 664