BLASTX nr result
ID: Paeonia25_contig00010866
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Paeonia25_contig00010866 (1564 letters) Database: ./nr 38,876,450 sequences; 13,856,398,315 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_006390091.1| RNA dependent RNA polymerase [Persimmon cryp... 387 0.0 gb|AEJ07892.1| putative RNA-dependent RNA polymerase [Pepper cry... 345 e-167 gb|ADP24757.1| RNA-dependent RNA polymerase [Beet cryptic virus 2] 336 e-161 gb|AGQ49482.1| RNA-dependent RNA polymerase [Beet cryptic virus 2] 336 e-161 dbj|BAA34783.1| RNA-dependent RNA polymerase [Pyrus pyrifolia] 306 e-151 ref|YP_002364401.1| putative RNA-dependent RNA polymerase [Rapha... 299 e-146 gb|AEJ07890.1| putative RNA-dependent RNA polymerase [Pepper cry... 295 e-145 gb|AFO65948.1| RNA-dependent RNA polymerase [Alphacryptovirus JF... 304 e-144 gb|ABU55400.1| RNA-dependent RNA polymerase [Black raspberry cry... 379 e-143 gb|AGH12859.1| RNA-dependent RNA polymerase [Citrullus lanatus c... 295 e-141 gb|ABC96789.2| RNA-dependent RNA polymerase-like protein [Pepper... 254 2e-96 gb|AAB27624.1| putative RNA-dependent RNA polymerase [Beet crypt... 298 5e-78 gb|ADE34113.1| putative RNA-dependent RNA polymerase [Pittosporu... 195 6e-75 ref|YP_001274391.1| RNA-dependent RNA polymerase [Fragaria chilo... 160 8e-71 gb|AAY51483.1| putative RNA-dependent RNA polymerase [Pinus sylv... 134 4e-57 ref|XP_006841815.1| hypothetical protein AMTR_s00003p00269640 [A... 131 9e-42 ref|YP_004429258.1| RNA-dependent RNA polymerase [Fig cryptic vi... 164 1e-37 gb|ABV89762.1| putative RNA-dependent RNA polymerase [Rosa multi... 161 9e-37 ref|YP_001686786.1| RNA-dependent RNA polymerase [Rose cryptic v... 161 9e-37 ref|YP_009026407.1| RNA dependent RNA polymerase [Pigeon pea lat... 159 3e-36 >ref|YP_006390091.1| RNA dependent RNA polymerase [Persimmon cryptic virus] gi|388877111|emb|CCH50609.1| RNA dependent RNA polymerase [Persimmon cryptic virus] Length = 477 Score = 387 bits (995), Expect(2) = 0.0 Identities = 193/281 (68%), Positives = 226/281 (80%) Frame = +1 Query: 91 MALRTLREYEFKDFTNDFEDLDETHVHRVRRETGVTYHDQFAMSELQDLYPNLYDQYLSG 270 MALR++ YEF DF + E L++TH+H VRRE+GVTYHD+FA+ EL LY+Q L G Sbjct: 1 MALRSITGYEFHDFQSSLELLNQTHIHIVRRESGVTYHDEFALCELLVDNTRLYEQELEG 60 Query: 271 WSRSFYTRADHMKAIMQYSISETPINTVNETLYQQAMMAVLERLSSLQRVRAFDVLTQLD 450 WSRS+YT HMKAI+QYS+ TPI ++ YQQAM V ERLSSL VRAFDVLTQLD Sbjct: 61 WSRSYYTGEQHMKAILQYSLPNTPIQDIDVGCYQQAMTNVQERLSSLPIVRAFDVLTQLD 120 Query: 451 LVPFEPSSAAGYDYIGAKGELNGENHQRAIRRAKATLWSALAPDGEGMDHVVRTSVPDVG 630 V FE SSAAGYDY GAKG N NH+RAIRRAKA LWSA+A DGEG++HV+R+SVPDVG Sbjct: 121 QVSFESSSAAGYDYTGAKGPKNEGNHERAIRRAKAVLWSAIAQDGEGIEHVLRSSVPDVG 180 Query: 631 YTRTQLTLIGEKTKVRGVWGRAFHYILLEGTTAAPLLEAFKQGDTFLHIGHDPTQSVPDL 810 YTRTQLT + EKTKVRGVWGRAFHYIL EGT+A PLL+AFK+G TF HIG DPT SVP + Sbjct: 181 YTRTQLTDLSEKTKVRGVWGRAFHYILPEGTSADPLLQAFKEGGTFYHIGQDPTVSVPYI 240 Query: 811 LSRTASQCAWLIALDWTAFDASVSRFEIHAAFDILEKIIEF 933 LS TA +CAWL ALDW++FDA+VSRFEIHAAFD+L++ IEF Sbjct: 241 LSDTAGKCAWLYALDWSSFDATVSRFEIHAAFDLLKQRIEF 281 Score = 278 bits (711), Expect(2) = 0.0 Identities = 134/201 (66%), Positives = 155/201 (77%) Frame = +3 Query: 912 LGEDYRIPNSETLECFRICRHLFIHKKIAAPDGKNYWSHKGIPSGSYFTSIIGSIINRLR 1091 L + PN ET +C+ ICR LFIHKKIAAPDGK YW+HKGIPSGSY+TSIIGSIINRLR Sbjct: 275 LKQRIEFPNFETEQCYEICRQLFIHKKIAAPDGKVYWAHKGIPSGSYYTSIIGSIINRLR 334 Query: 1092 IEYIWRILKGRGPIICYTQGDDSLIGESEYTNPEDLAKIAESLNWYLNPAKTETSRSIEF 1271 IEYIW L+G GP ICYTQGDDSL G+ E PE +A IA + W +NPAKT T+R E+ Sbjct: 335 IEYIWIKLRGHGPTICYTQGDDSLCGDDERIEPERIADIANPIGWLINPAKTATTRYPEY 394 Query: 1272 VTFLGRTSYGGLNQRDLKRCLRLLIFPEHPVETGRISAFRARSIAQDAGHTSEVLNTIAK 1451 +TFLGRT YGGLN RDL RCLRLLI+PE+PV +G ISA+RA SIA+D G TS +LN IA+ Sbjct: 395 ITFLGRTCYGGLNHRDLIRCLRLLIYPEYPVPSGAISAYRANSIAEDCGGTSSILNDIAR 454 Query: 1452 RLRRKYGIAEASEVPRYLRPY 1514 RL RKYG EVP+ LR Y Sbjct: 455 RLTRKYGRVSHEEVPKELRVY 475 >gb|AEJ07892.1| putative RNA-dependent RNA polymerase [Pepper cryptic virus 2] Length = 478 Score = 345 bits (885), Expect(2) = e-167 Identities = 163/282 (57%), Positives = 212/282 (75%) Frame = +1 Query: 100 RTLREYEFKDFTNDFEDLDETHVHRVRRETGVTYHDQFAMSELQDLYPNLYDQYLSGWSR 279 R L Y F F ND E LD+ H+H +RRE TY D+FA+ EL DL P LY+Q+L GWSR Sbjct: 5 RMLNGYVFTAFGNDLEKLDQRHIHHIRREEATTYRDEFALKELMDLSPILYEQFLEGWSR 64 Query: 280 SFYTRADHMKAIMQYSISETPINTVNETLYQQAMMAVLERLSSLQRVRAFDVLTQLDLVP 459 S+Y + H++AI+QY I + ++ +Y +A VLE L SL RVRAFDVLT+LD V Sbjct: 65 SYYEGSKHLQAIIQYGIPDPDPGLIDNDIYNKAGYVVLESLGSLPRVRAFDVLTELDSVH 124 Query: 460 FEPSSAAGYDYIGAKGELNGENHQRAIRRAKATLWSALAPDGEGMDHVVRTSVPDVGYTR 639 +E SS+AGYDY G KG + GENH RAI RAKATLWSA+ +GEG++HV+R++VPDVGYTR Sbjct: 125 YEQSSSAGYDYHGPKGPIQGENHIRAITRAKATLWSAIKDEGEGIEHVIRSAVPDVGYTR 184 Query: 640 TQLTLIGEKTKVRGVWGRAFHYILLEGTTAAPLLEAFKQGDTFLHIGHDPTQSVPDLLSR 819 TQLT + EKTK+RGVWGRAFHYILLEGT A PLL+ FK+G TF HIG +P SVPD+LS+ Sbjct: 185 TQLTDLYEKTKIRGVWGRAFHYILLEGTIANPLLDVFKRGGTFYHIGENPQYSVPDILSQ 244 Query: 820 TASQCAWLIALDWTAFDASVSRFEIHAAFDILEKIIEFQTLK 945 + C +L+A+DW+ FDA+V+RFEI+ AFD+++ +I F ++ Sbjct: 245 VSECCKYLVAIDWSNFDATVARFEINMAFDLIKTLIMFPNIE 286 Score = 273 bits (698), Expect(2) = e-167 Identities = 136/194 (70%), Positives = 155/194 (79%) Frame = +3 Query: 933 PNSETLECFRICRHLFIHKKIAAPDGKNYWSHKGIPSGSYFTSIIGSIINRLRIEYIWRI 1112 PN ET CF ICR LFIHKKIAAPDG YWS KGIPSGSYFTSIIGSI+NRLR+EYI+R Sbjct: 283 PNIETELCFEICRQLFIHKKIAAPDGNIYWSRKGIPSGSYFTSIIGSIVNRLRVEYIFRK 342 Query: 1113 LKGRGPIICYTQGDDSLIGESEYTNPEDLAKIAESLNWYLNPAKTETSRSIEFVTFLGRT 1292 GP +CYTQGDDSLIG +P+ L++IA LNW LNPAKT+ S E VTFLGRT Sbjct: 343 AYDVGPKMCYTQGDDSLIGVDFRVDPDRLSEIAAPLNWKLNPAKTDVSLYPEHVTFLGRT 402 Query: 1293 SYGGLNQRDLKRCLRLLIFPEHPVETGRISAFRARSIAQDAGHTSEVLNTIAKRLRRKYG 1472 YGG+NQRDLKRCLRLLIFPE PV +G ISA+RA SIAQDAG TSE+LN+IAKRLRR+YG Sbjct: 403 MYGGINQRDLKRCLRLLIFPEFPVPSGEISAYRAVSIAQDAGGTSEILNSIAKRLRRQYG 462 Query: 1473 IAEASEVPRYLRPY 1514 +AE VP++ + Y Sbjct: 463 VAEEHAVPKHFKLY 476 >gb|ADP24757.1| RNA-dependent RNA polymerase [Beet cryptic virus 2] Length = 475 Score = 336 bits (862), Expect(2) = e-161 Identities = 165/283 (58%), Positives = 203/283 (71%) Frame = +1 Query: 97 LRTLREYEFKDFTNDFEDLDETHVHRVRRETGVTYHDQFAMSELQDLYPNLYDQYLSGWS 276 +RT+ YE+ FT D E+ D TH H VRR+ VTY D FA EL YP LY+ + GWS Sbjct: 1 MRTINNYEYTSFTEDLEETDYTHPHVVRRDPEVTYEDTFAKKELLSRYPALYENLIRGWS 60 Query: 277 RSFYTRADHMKAIMQYSISETPINTVNETLYQQAMMAVLERLSSLQRVRAFDVLTQLDLV 456 RS+YT +H++AIMQY+ T + + Y +A+ V E L SL VRAF+VL +LDL+ Sbjct: 61 RSYYTGQEHLRAIMQYATPNTNFSECVQHAYTKAITKVTESLHSLPTVRAFNVLEELDLI 120 Query: 457 PFEPSSAAGYDYIGAKGELNGENHQRAIRRAKATLWSALAPDGEGMDHVVRTSVPDVGYT 636 P+E SS+AGY Y G KG +GENH +AI+ AKA LWS + DGEG++HV+ T VPDVGYT Sbjct: 121 PYESSSSAGYTYRGVKGPQHGENHMQAIKTAKAVLWSVIKDDGEGIEHVIDTYVPDVGYT 180 Query: 637 RTQLTLIGEKTKVRGVWGRAFHYILLEGTTAAPLLEAFKQGDTFLHIGHDPTQSVPDLLS 816 RTQLT + EK KVRGVWGRAFHYILLEGT+AAPLLEAF +TF HIG DPT SVP L+S Sbjct: 181 RTQLTDLREKMKVRGVWGRAFHYILLEGTSAAPLLEAFANSNTFFHIGKDPTVSVPYLIS 240 Query: 817 RTASQCAWLIALDWTAFDASVSRFEIHAAFDILEKIIEFQTLK 945 T Q WL A+DW AFDA+VSRFEI+AAFDI++ I F L+ Sbjct: 241 YTKGQAPWLTAIDWQAFDATVSRFEINAAFDIIKSKITFPNLE 283 Score = 262 bits (669), Expect(2) = e-161 Identities = 125/194 (64%), Positives = 155/194 (79%) Frame = +3 Query: 933 PNSETLECFRICRHLFIHKKIAAPDGKNYWSHKGIPSGSYFTSIIGSIINRLRIEYIWRI 1112 PN ET + F I R LFIHKK+AAP+GK Y HKGIPSGSYFTSIIGS++NRLRIEY+W + Sbjct: 280 PNLETEQAFEISRQLFIHKKLAAPNGKIYRIHKGIPSGSYFTSIIGSVVNRLRIEYLWNL 339 Query: 1113 LKGRGPIICYTQGDDSLIGESEYTNPEDLAKIAESLNWYLNPAKTETSRSIEFVTFLGRT 1292 RGP +C+TQGDDSLIG+ E +P D+A + LNW++N +K+ TS+ E +TFLGR+ Sbjct: 340 KFNRGPKVCFTQGDDSLIGDDELYSPMDMAAFVKPLNWFINTSKSMTSKVPEAITFLGRS 399 Query: 1293 SYGGLNQRDLKRCLRLLIFPEHPVETGRISAFRARSIAQDAGHTSEVLNTIAKRLRRKYG 1472 S GGLNQRDLKRCLRLLI PE+PV +G ISAFRA SI +D+G TS++L+ IA LRRKYG Sbjct: 400 SLGGLNQRDLKRCLRLLILPEYPVTSGDISAFRANSIWRDSGSTSQILHEIANALRRKYG 459 Query: 1473 IAEASEVPRYLRPY 1514 IA+ +VPRYLRP+ Sbjct: 460 IAKEQDVPRYLRPW 473 >gb|AGQ49482.1| RNA-dependent RNA polymerase [Beet cryptic virus 2] Length = 475 Score = 336 bits (862), Expect(2) = e-161 Identities = 165/283 (58%), Positives = 203/283 (71%) Frame = +1 Query: 97 LRTLREYEFKDFTNDFEDLDETHVHRVRRETGVTYHDQFAMSELQDLYPNLYDQYLSGWS 276 +RT+ YE+ FT D E+ D TH H VRR+ VTY D FA EL YP LY+ + GWS Sbjct: 1 MRTINNYEYTSFTEDLEETDYTHPHVVRRDPEVTYEDTFAKKELLSRYPALYENLIRGWS 60 Query: 277 RSFYTRADHMKAIMQYSISETPINTVNETLYQQAMMAVLERLSSLQRVRAFDVLTQLDLV 456 RS+YT +H++AIMQY+ T + + Y +A+ V E L SL VRAF+VL +LDL+ Sbjct: 61 RSYYTGQEHLRAIMQYATPNTNFSECVQHAYTKAITKVTESLHSLPTVRAFNVLEELDLI 120 Query: 457 PFEPSSAAGYDYIGAKGELNGENHQRAIRRAKATLWSALAPDGEGMDHVVRTSVPDVGYT 636 P+E SS+AGY Y G KG +GENH +AI+ AKA LWS + DGEG++HV+ T VPDVGYT Sbjct: 121 PYESSSSAGYTYRGVKGPQHGENHMQAIKTAKAVLWSVIKDDGEGIEHVIDTYVPDVGYT 180 Query: 637 RTQLTLIGEKTKVRGVWGRAFHYILLEGTTAAPLLEAFKQGDTFLHIGHDPTQSVPDLLS 816 RTQLT + EK KVRGVWGRAFHYILLEGT+AAPLLEAF +TF HIG DPT SVP L+S Sbjct: 181 RTQLTDLREKMKVRGVWGRAFHYILLEGTSAAPLLEAFANSNTFFHIGKDPTVSVPYLIS 240 Query: 817 RTASQCAWLIALDWTAFDASVSRFEIHAAFDILEKIIEFQTLK 945 T Q WL A+DW AFDA+VSRFEI+AAFDI++ I F L+ Sbjct: 241 YTKGQAPWLTAIDWQAFDATVSRFEINAAFDIIKSKITFPNLE 283 Score = 260 bits (665), Expect(2) = e-161 Identities = 125/194 (64%), Positives = 154/194 (79%) Frame = +3 Query: 933 PNSETLECFRICRHLFIHKKIAAPDGKNYWSHKGIPSGSYFTSIIGSIINRLRIEYIWRI 1112 PN ET + F I R LFIHKK+AAP+GK Y HKGIPSGSYFTSIIGS++NRLRIEY W + Sbjct: 280 PNLETEQAFEISRQLFIHKKLAAPNGKIYRIHKGIPSGSYFTSIIGSVVNRLRIEYSWNL 339 Query: 1113 LKGRGPIICYTQGDDSLIGESEYTNPEDLAKIAESLNWYLNPAKTETSRSIEFVTFLGRT 1292 RGP +C+TQGDDSLIG+ E +P D+A + LNW++N +K+ TS+ E +TFLGR+ Sbjct: 340 KFNRGPKVCFTQGDDSLIGDDELYSPTDMAAFVKPLNWFINTSKSMTSKVPEAITFLGRS 399 Query: 1293 SYGGLNQRDLKRCLRLLIFPEHPVETGRISAFRARSIAQDAGHTSEVLNTIAKRLRRKYG 1472 S GGLNQRDLKRCLRLLI PE+PV +G ISAFRA SI +D+G TS++L+ IA LRRKYG Sbjct: 400 SLGGLNQRDLKRCLRLLILPEYPVTSGDISAFRANSIWRDSGSTSQILHGIANALRRKYG 459 Query: 1473 IAEASEVPRYLRPY 1514 IA+ +VPRYLRP+ Sbjct: 460 IAKEQDVPRYLRPW 473 >dbj|BAA34783.1| RNA-dependent RNA polymerase [Pyrus pyrifolia] Length = 477 Score = 306 bits (785), Expect(2) = e-151 Identities = 145/273 (53%), Positives = 198/273 (72%) Frame = +1 Query: 115 YEFKDFTNDFEDLDETHVHRVRRETGVTYHDQFAMSELQDLYPNLYDQYLSGWSRSFYTR 294 +EF D++ + E+L++ H+H+VRRE+ TY D+FA EL DL+P + Q++ GWSRS+Y Sbjct: 9 FEFVDYSEELENLNQNHIHKVRRESNTTYVDKFAERELIDLHPEYHRQFIQGWSRSYYNT 68 Query: 295 ADHMKAIMQYSISETPINTVNETLYQQAMMAVLERLSSLQRVRAFDVLTQLDLVPFEPSS 474 HM+A++ Y P++ V+ LYQ + V L SL RV+AFDVLT+L+LV ++ S+ Sbjct: 69 ERHMEALLNYGTRNIPVDNVDYNLYQGCIDTVKNGLRSLPRVKAFDVLTELNLVSYKSST 128 Query: 475 AAGYDYIGAKGELNGENHQRAIRRAKATLWSALAPDGEGMDHVVRTSVPDVGYTRTQLTL 654 AAGY+Y+GAKG +G NH++AIRRA+AT+ EG+ + T+VPDVGYTRTQLT Sbjct: 129 AAGYNYMGAKGPFDGYNHKQAIRRARATVGDVSDNGIEGLRRAITTAVPDVGYTRTQLTD 188 Query: 655 IGEKTKVRGVWGRAFHYILLEGTTAAPLLEAFKQGDTFLHIGHDPTQSVPDLLSRTASQC 834 + EKTK+R VWGRAFHYIL+EGT+A PL+ F + +F HIG DP SVPD+LS TA + Sbjct: 189 LTEKTKIRNVWGRAFHYILIEGTSADPLIRMFSKTKSFYHIGRDPLDSVPDVLSETAGKA 248 Query: 835 AWLIALDWTAFDASVSRFEIHAAFDILEKIIEF 933 WL A+DW FDA+VSRFEI+AAFDI+ +IEF Sbjct: 249 RWLYAIDWKQFDATVSRFEINAAFDIIMDLIEF 281 Score = 256 bits (654), Expect(2) = e-151 Identities = 124/194 (63%), Positives = 147/194 (75%) Frame = +3 Query: 933 PNSETLECFRICRHLFIHKKIAAPDGKNYWSHKGIPSGSYFTSIIGSIINRLRIEYIWRI 1112 PN T F + R LFIHKKIAAPDG YWSHKGIPSGSYFTSIIGSIINRLRIEY+WR Sbjct: 282 PNYPTYVAFELSRQLFIHKKIAAPDGYIYWSHKGIPSGSYFTSIIGSIINRLRIEYLWRK 341 Query: 1113 LKGRGPIICYTQGDDSLIGESEYTNPEDLAKIAESLNWYLNPAKTETSRSIEFVTFLGRT 1292 + G GP+ CYTQGDDSL + E+T PE A+IA + W LNP KTE S V FLGRT Sbjct: 342 ITGHGPLACYTQGDDSLSCDDEFTPPEKFAEIANQIGWVLNPEKTEYSTIPSEVHFLGRT 401 Query: 1293 SYGGLNQRDLKRCLRLLIFPEHPVETGRISAFRARSIAQDAGHTSEVLNTIAKRLRRKYG 1472 GGLN R++KRCLRLLI+PE+PV++GRISA+RA+SI++D G SE+LN I +RL+ +YG Sbjct: 402 MLGGLNTREIKRCLRLLIYPEYPVDSGRISAYRAKSISEDVGRLSELLNKIERRLQGQYG 461 Query: 1473 IAEASEVPRYLRPY 1514 IA EVP Y + Y Sbjct: 462 IASDEEVPDYFKRY 475 >ref|YP_002364401.1| putative RNA-dependent RNA polymerase [Raphanus sativus cryptic virus 3] gi|217039787|gb|ACJ76981.1| putative RNA-dependent RNA polymerase [Raphanus sativus cryptic virus 3] Length = 481 Score = 299 bits (766), Expect(2) = e-146 Identities = 144/271 (53%), Positives = 185/271 (68%) Frame = +1 Query: 106 LREYEFKDFTNDFEDLDETHVHRVRRETGVTYHDQFAMSELQDLYPNLYDQYLSGWSRSF 285 L Y + F +D E+ ++ H + +RRET VTY D+FA+ + DL Y+Q+L GWSRS+ Sbjct: 8 LAGYVYTGFISDLEETNQRHTNVIRRETAVTYRDEFALQSILDLDYRQYEQHLQGWSRSY 67 Query: 286 YTRADHMKAIMQYSISETPINTVNETLYQQAMMAVLERLSSLQRVRAFDVLTQLDLVPFE 465 YT H +AI+QYS + P+ + +Y + V SL VRA+ VLTQLDLV ++ Sbjct: 68 YTPEKHQEAILQYSYPDIPVQAIKMDVYNDCIAQVQNEFRSLPNVRAYSVLTQLDLVKYK 127 Query: 466 PSSAAGYDYIGAKGELNGENHQRAIRRAKATLWSALAPDGEGMDHVVRTSVPDVGYTRTQ 645 SSAAGY Y G KG NH RAI RAKA LWSA+A DGEG++HV++TS PD+GYTRTQ Sbjct: 128 SSSAAGYGYQGTKGNPGELNHARAISRAKAVLWSAIAADGEGIEHVIKTSTPDIGYTRTQ 187 Query: 646 LTLIGEKTKVRGVWGRAFHYILLEGTTAAPLLEAFKQGDTFLHIGHDPTQSVPDLLSRTA 825 LT + EKTKVR VWGRAFHYILLEG A P ++A + +TF+H G DPT SVP LLS A Sbjct: 188 LTDLTEKTKVRQVWGRAFHYILLEGLVADPFIQAVMENNTFIHAGRDPTLSVPQLLSHIA 247 Query: 826 SQCAWLIALDWTAFDASVSRFEIHAAFDILE 918 W+ +LDW FDA+VSRFEI +AF I++ Sbjct: 248 ETSDWIYSLDWKQFDATVSRFEIESAFTIIK 278 Score = 249 bits (636), Expect(2) = e-146 Identities = 117/194 (60%), Positives = 150/194 (77%) Frame = +3 Query: 933 PNSETLECFRICRHLFIHKKIAAPDGKNYWSHKGIPSGSYFTSIIGSIINRLRIEYIWRI 1112 P+ ET + F I + LFIHKK+AAPDGK Y++HKGIPSGSY+TS++GSI+NRLRIEY++R+ Sbjct: 284 PDRETEDAFEITKQLFIHKKVAAPDGKIYFAHKGIPSGSYYTSLVGSIVNRLRIEYLYRL 343 Query: 1113 LKGRGPIICYTQGDDSLIGESEYTNPEDLAKIAESLNWYLNPAKTETSRSIEFVTFLGRT 1292 + GRGP IC+T GDDSL+G+ E P IA + WY N KTE SR E V+FLGR+ Sbjct: 344 ILGRGPKICHTLGDDSLVGDDELIVPSSFGLIANRIGWYFNIEKTEYSRIPEMVSFLGRS 403 Query: 1293 SYGGLNQRDLKRCLRLLIFPEHPVETGRISAFRARSIAQDAGHTSEVLNTIAKRLRRKYG 1472 GGLN RDLKRCLRLL+FPE+PV +GRISA+RA+SIA+D G S++LN +A RL+R+YG Sbjct: 404 YKGGLNVRDLKRCLRLLVFPEYPVPSGRISAYRAKSIAEDCGGISDLLNRVAARLKRQYG 463 Query: 1473 IAEASEVPRYLRPY 1514 +A EVP Y + Y Sbjct: 464 LASEEEVPIYFKRY 477 >gb|AEJ07890.1| putative RNA-dependent RNA polymerase [Pepper cryptic virus 1] Length = 479 Score = 295 bits (756), Expect(2) = e-145 Identities = 148/284 (52%), Positives = 189/284 (66%), Gaps = 3/284 (1%) Frame = +1 Query: 91 MALRTLREYEFKDFTNDFEDLDETHVHRVRRETGVTYHDQFAMSELQ---DLYPNLYDQY 261 M TL Y++ F D H H V RE TY DQ+A ++ LYP L Sbjct: 1 MVRGTLVGYDYTQFQGDLVKSTHRHPHVVHREIATTYVDQYAYEHIETFSSLYPELI--- 57 Query: 262 LSGWSRSFYTRADHMKAIMQYSISETPINTVNETLYQQAMMAVLERLSSLQRVRAFDVLT 441 L GWSRS+Y H+ A++ YS+ P + ++++LY+QA+ + SL RV+AFDVLT Sbjct: 58 LKGWSRSYYLPEKHLAAVLNYSMPNVPASQLSQSLYRQAIESAKNGFISLPRVKAFDVLT 117 Query: 442 QLDLVPFEPSSAAGYDYIGAKGELNGENHQRAIRRAKATLWSALAPDGEGMDHVVRTSVP 621 ++D VPF+ SS+AGY+Y G KG + ENH RAI AKA LWSA+ DGEG++HV+RTSVP Sbjct: 118 EMDQVPFKSSSSAGYNYTGRKGLIGDENHSRAISIAKAVLWSAIKDDGEGIEHVIRTSVP 177 Query: 622 DVGYTRTQLTLIGEKTKVRGVWGRAFHYILLEGTTAAPLLEAFKQGDTFLHIGHDPTQSV 801 DVGYTRTQLT + EKTKVR VWGRAFHYILLEG A P ++ TF+H G DP SV Sbjct: 178 DVGYTRTQLTDLLEKTKVRQVWGRAFHYILLEGLVAYPFIQTVMSHKTFIHAGQDPLISV 237 Query: 802 PDLLSRTASQCAWLIALDWTAFDASVSRFEIHAAFDILEKIIEF 933 P LLS A C W+ +LDW+ FDA+VSRFEIHAAFDI++ ++F Sbjct: 238 PRLLSDVALNCKWIYSLDWSQFDATVSRFEIHAAFDIIKSYVDF 281 Score = 247 bits (630), Expect(2) = e-145 Identities = 118/194 (60%), Positives = 146/194 (75%) Frame = +3 Query: 933 PNSETLECFRICRHLFIHKKIAAPDGKNYWSHKGIPSGSYFTSIIGSIINRLRIEYIWRI 1112 PN ET + F I R LFIHKK+A PDG Y SHKGIPSGSY+TS++GSIIN LRI Y+WR+ Sbjct: 282 PNYETEQAFEITRQLFIHKKVAVPDGYIYESHKGIPSGSYYTSLVGSIINYLRINYLWRL 341 Query: 1113 LKGRGPIICYTQGDDSLIGESEYTNPEDLAKIAESLNWYLNPAKTETSRSIEFVTFLGRT 1292 L G P C+T GDDSL+G++ Y NP+ + + A L W+ NP KT+ S E +TFLGRT Sbjct: 342 LTGHPPQQCHTLGDDSLVGDNSYVNPQAIEEAANKLGWHFNPDKTQYSTVPEEITFLGRT 401 Query: 1293 SYGGLNQRDLKRCLRLLIFPEHPVETGRISAFRARSIAQDAGHTSEVLNTIAKRLRRKYG 1472 GGLN+RDL +C+RLL++PE+PVE+GRISA+RA+SIAQDAG SEVLN IA +LRR YG Sbjct: 402 YVGGLNKRDLTKCIRLLVYPEYPVESGRISAYRAKSIAQDAGGLSEVLNRIADKLRRIYG 461 Query: 1473 IAEASEVPRYLRPY 1514 A EVP Y + Y Sbjct: 462 TASEEEVPIYFKRY 475 >gb|AFO65948.1| RNA-dependent RNA polymerase [Alphacryptovirus JF-2012] Length = 478 Score = 304 bits (779), Expect(2) = e-144 Identities = 145/273 (53%), Positives = 190/273 (69%) Frame = +1 Query: 115 YEFKDFTNDFEDLDETHVHRVRRETGVTYHDQFAMSELQDLYPNLYDQYLSGWSRSFYTR 294 Y++ +FT D D H H VRRET TY D FA E+ Y Q L GWSRS+Y Sbjct: 8 YDYTNFTQDLLKSDRKHPHVVRRETATTYRDDFAFKEVVSFDRLAYIQRLEGWSRSYYLP 67 Query: 295 ADHMKAIMQYSISETPINTVNETLYQQAMMAVLERLSSLQRVRAFDVLTQLDLVPFEPSS 474 H++A++QY+ P +N +Y QA+ V L SLQ VRAFDVLT+L+ + ++ SS Sbjct: 68 EKHLEALLQYATPNVPCTALNLNVYCQAIQVVENGLRSLQPVRAFDVLTELNQISYKQSS 127 Query: 475 AAGYDYIGAKGELNGENHQRAIRRAKATLWSALAPDGEGMDHVVRTSVPDVGYTRTQLTL 654 AAGYDYIGAKG ++GENH+R I RAKA LWS + DGEG+DH + TSVPDVGYTRTQL Sbjct: 128 AAGYDYIGAKGPIDGENHKRTISRAKAVLWSVVKEDGEGIDHAIETSVPDVGYTRTQLAD 187 Query: 655 IGEKTKVRGVWGRAFHYILLEGTTAAPLLEAFKQGDTFLHIGHDPTQSVPDLLSRTASQC 834 + EKTKVR VWGRAFHYILLEG A P +++ +G +F+H G DPT SVP L++ +SQC Sbjct: 188 LTEKTKVRQVWGRAFHYILLEGLVAQPFIQSIMEGPSFIHTGRDPTLSVPQSLAKVSSQC 247 Query: 835 AWLIALDWTAFDASVSRFEIHAAFDILEKIIEF 933 ++ +LDW +FDA+V+RFEI+ +FDI++ + F Sbjct: 248 KYIYSLDWKSFDATVNRFEINTSFDIIKSKVIF 280 Score = 238 bits (606), Expect(2) = e-144 Identities = 117/194 (60%), Positives = 140/194 (72%) Frame = +3 Query: 933 PNSETLECFRICRHLFIHKKIAAPDGKNYWSHKGIPSGSYFTSIIGSIINRLRIEYIWRI 1112 PN ET + F I R LF+HKK+AAPDG Y +HKGIPSGSY+TS++GSI+NRLRIEYIWRI Sbjct: 281 PNYETEQAFEITRQLFLHKKVAAPDGYIYEAHKGIPSGSYYTSMVGSIVNRLRIEYIWRI 340 Query: 1113 LKGRGPIICYTQGDDSLIGESEYTNPEDLAKIAESLNWYLNPAKTETSRSIEFVTFLGRT 1292 G GPI C T DDSL G+ + LA IA + WY N KTE S E VTFLGRT Sbjct: 341 ATGHGPIHCETLVDDSLCGDDIFVPATQLADIANRIGWYFNADKTEYSTIPEGVTFLGRT 400 Query: 1293 SYGGLNQRDLKRCLRLLIFPEHPVETGRISAFRARSIAQDAGHTSEVLNTIAKRLRRKYG 1472 S G LN RDL +CLRLL++PE+PV +GRISA+RARSIA D+G S++LN +A RL R YG Sbjct: 401 STGNLNSRDLTKCLRLLVYPEYPVTSGRISAYRARSIADDSGGLSDLLNQVAIRLERSYG 460 Query: 1473 IAEASEVPRYLRPY 1514 IA E+P Y + Y Sbjct: 461 IASEEEIPAYFKRY 474 >gb|ABU55400.1| RNA-dependent RNA polymerase [Black raspberry cryptic virus] Length = 393 Score = 379 bits (973), Expect(2) = e-143 Identities = 184/285 (64%), Positives = 218/285 (76%) Frame = +1 Query: 91 MALRTLREYEFKDFTNDFEDLDETHVHRVRRETGVTYHDQFAMSELQDLYPNLYDQYLSG 270 MAL+ + +++F DF D E L E H +RRE YHD FA+ EL+ YP LY+QYL G Sbjct: 1 MALQLVNDHDFIDFQADLEILPENHAQTIRREPNTVYHDDFALRELKSAYPLLYEQYLEG 60 Query: 271 WSRSFYTRADHMKAIMQYSISETPINTVNETLYQQAMMAVLERLSSLQRVRAFDVLTQLD 450 WSRSFYT+ DHMKAIMQYS PI VNE LY QA+ A LERL SL VRA DVLT LD Sbjct: 61 WSRSFYTKEDHMKAIMQYSYPNIPIEAVNENLYNQAINATLERLRSLPTVRAIDVLTDLD 120 Query: 451 LVPFEPSSAAGYDYIGAKGELNGENHQRAIRRAKATLWSALAPDGEGMDHVVRTSVPDVG 630 V FEP+S+AGY Y G KG+ GE H++AIRRAKATLWSA+ + EG+DHV+RT VPDVG Sbjct: 121 SVSFEPTSSAGYGYNGVKGDSLGEIHKQAIRRAKATLWSAIRTEDEGIDHVIRTFVPDVG 180 Query: 631 YTRTQLTLIGEKTKVRGVWGRAFHYILLEGTTAAPLLEAFKQGDTFLHIGHDPTQSVPDL 810 YTRTQLT EKTKVRGVWGR FHYILLEGT A PLL+AFK G TFLHIG DP QSVP+L Sbjct: 181 YTRTQLTQHREKTKVRGVWGRCFHYILLEGTAAQPLLDAFKAGTTFLHIGQDPKQSVPNL 240 Query: 811 LSRTASQCAWLIALDWTAFDASVSRFEIHAAFDILEKIIEFQTLK 945 LS ++ C WL+ALDW++FDA+VSRFEIHAAFDIL++ ++F ++ Sbjct: 241 LSSISNHCKWLMALDWSSFDATVSRFEIHAAFDILKQFVQFPNVE 285 Score = 158 bits (400), Expect(2) = e-143 Identities = 73/109 (66%), Positives = 86/109 (78%) Frame = +3 Query: 927 RIPNSETLECFRICRHLFIHKKIAAPDGKNYWSHKGIPSGSYFTSIIGSIINRLRIEYIW 1106 + PN ET + F I R LFIHKKIAAPDGK YWSHKGIPSGSY+TSIIGS++N LRIEYI+ Sbjct: 280 QFPNVETEQAFEISRQLFIHKKIAAPDGKIYWSHKGIPSGSYYTSIIGSVVNHLRIEYIF 339 Query: 1107 RILKGRGPIICYTQGDDSLIGESEYTNPEDLAKIAESLNWYLNPAKTET 1253 R + G GP +CYTQGDDS+IG Y +P L++ A+ L W LNPAKTET Sbjct: 340 RTVTGNGPKVCYTQGDDSIIGLDSYIDPSLLSEAAQPLGWVLNPAKTET 388 >gb|AGH12859.1| RNA-dependent RNA polymerase [Citrullus lanatus cryptic virus] Length = 415 Score = 295 bits (754), Expect(2) = e-141 Identities = 145/234 (61%), Positives = 175/234 (74%) Frame = +1 Query: 232 DLYPNLYDQYLSGWSRSFYTRADHMKAIMQYSISETPINTVNETLYQQAMMAVLERLSSL 411 ++ P LY+Q LSGWSRS+Y HM+AI+QY + PI+++N+ LY++ + V RLSSL Sbjct: 2 NISPLLYEQCLSGWSRSYYLHDKHMQAIIQYGYKDVPISSINDRLYKECVHEVQNRLSSL 61 Query: 412 QRVRAFDVLTQLDLVPFEPSSAAGYDYIGAKGELNGENHQRAIRRAKATLWSALAPDGEG 591 RVRA DVL++LD V F+ SSAAGYDYIGAKG GENH RA+ RAKA +WS G Sbjct: 62 PRVRALDVLSELDSVTFKSSSAAGYDYIGAKGPKGGENHTRAMSRAKAIMWSIAETGETG 121 Query: 592 MDHVVRTSVPDVGYTRTQLTLIGEKTKVRGVWGRAFHYILLEGTTAAPLLEAFKQGDTFL 771 M H + T+VPDVGYTRTQL I EKTKVR VWGRAFHYILLEG TA PL+ A ++ DTF+ Sbjct: 122 MKHAIETAVPDVGYTRTQLADITEKTKVRHVWGRAFHYILLEGLTADPLIRAVQRADTFI 181 Query: 772 HIGHDPTQSVPDLLSRTASQCAWLIALDWTAFDASVSRFEIHAAFDILEKIIEF 933 HIG DPT SVP LLS TA QC WL ALDW FDA+VSRFEI AAFDI+ +++F Sbjct: 182 HIGKDPTVSVPRLLSDTAEQCKWLYALDWKQFDATVSRFEIEAAFDIVLNLLDF 235 Score = 236 bits (601), Expect(2) = e-141 Identities = 114/177 (64%), Positives = 134/177 (75%) Frame = +3 Query: 933 PNSETLECFRICRHLFIHKKIAAPDGKNYWSHKGIPSGSYFTSIIGSIINRLRIEYIWRI 1112 PN ET F + + LFIHKKIAAPDGK YW+HKGIPSGSYFTSIIGSIINR I +WR Sbjct: 236 PNRETKLMFELSKQLFIHKKIAAPDGKIYWAHKGIPSGSYFTSIIGSIINRTEILMLWRT 295 Query: 1113 LKGRGPIICYTQGDDSLIGESEYTNPEDLAKIAESLNWYLNPAKTETSRSIEFVTFLGRT 1292 + G GPI+CYTQGDDSL G++ PE A +A + WY N KTE S E +TFLGR+ Sbjct: 296 ITGHGPIVCYTQGDDSLCGDNILIPPERFAMVANPIGWYFNQEKTEYSTIPELITFLGRS 355 Query: 1293 SYGGLNQRDLKRCLRLLIFPEHPVETGRISAFRARSIAQDAGHTSEVLNTIAKRLRR 1463 GGLN+RDLKRCLRLLIFPE+PVE+GRISA+RA+SI+ D G +VLN +A RLRR Sbjct: 356 YAGGLNKRDLKRCLRLLIFPEYPVESGRISAYRAQSISDDVGGLGDVLNKLADRLRR 412 >gb|ABC96789.2| RNA-dependent RNA polymerase-like protein [Pepper cryptic virus 1] Length = 311 Score = 254 bits (650), Expect(2) = 2e-96 Identities = 121/211 (57%), Positives = 156/211 (73%) Frame = +1 Query: 301 HMKAIMQYSISETPINTVNETLYQQAMMAVLERLSSLQRVRAFDVLTQLDLVPFEPSSAA 480 H+ A++ YS+ P + ++++LY+QA+ + SL RV+AFDVLT++D VPF+ SS+A Sbjct: 5 HLAAVLNYSMPNVPASQLSQSLYRQAIESAKNGFISLPRVKAFDVLTEMDQVPFKSSSSA 64 Query: 481 GYDYIGAKGELNGENHQRAIRRAKATLWSALAPDGEGMDHVVRTSVPDVGYTRTQLTLIG 660 GY+Y G KG + ENH RAI AKA LWSA+ DGEG++HV+RTSVPDVGYTRTQLT + Sbjct: 65 GYNYTGRKGLIGDENHSRAISIAKAVLWSAIKDDGEGIEHVIRTSVPDVGYTRTQLTDLL 124 Query: 661 EKTKVRGVWGRAFHYILLEGTTAAPLLEAFKQGDTFLHIGHDPTQSVPDLLSRTASQCAW 840 EKTKVR VWGRAFHYILLEG A P ++ TF+H G DP SVP LLS A C W Sbjct: 125 EKTKVRQVWGRAFHYILLEGLVAYPFIQTVMSHKTFIHAGQDPLISVPRLLSDVALNCKW 184 Query: 841 LIALDWTAFDASVSRFEIHAAFDILEKIIEF 933 + +LDW+ FDA+VSRFEIHAAFDI++ ++F Sbjct: 185 IYSLDWSQFDATVSRFEIHAAFDIIKSYVDF 215 Score = 127 bits (318), Expect(2) = 2e-96 Identities = 58/96 (60%), Positives = 72/96 (75%) Frame = +3 Query: 933 PNSETLECFRICRHLFIHKKIAAPDGKNYWSHKGIPSGSYFTSIIGSIINRLRIEYIWRI 1112 PN ET + F I R LFIHKK+AAPDG Y SHKGIPSGSY+TS++GSIIN LRI Y+WR+ Sbjct: 216 PNYETEQAFEITRQLFIHKKVAAPDGYIYESHKGIPSGSYYTSLVGSIINYLRINYLWRL 275 Query: 1113 LKGRGPIICYTQGDDSLIGESEYTNPEDLAKIAESL 1220 L G P C+T GDDSL+G++ Y NP+ + + A L Sbjct: 276 LTGHPPQQCHTLGDDSLVGDNSYVNPQAIEEAANKL 311 >gb|AAB27624.1| putative RNA-dependent RNA polymerase [Beet cryptic virus 3] Length = 478 Score = 298 bits (763), Expect = 5e-78 Identities = 149/282 (52%), Positives = 196/282 (69%), Gaps = 1/282 (0%) Frame = +1 Query: 91 MALRTLREYEFKDFTNDFEDLDETHVHRVRRETGVTYHDQFAMSELQDLYPNLYDQYLSG 270 MA R +REYEF +F + ++ TH + + RE+ V +D+FA + L D +P LY+Q G Sbjct: 1 MAYRNIREYEFTNFNEELYQIEGTHTNTIGRESEVILNDEFAKAILIDEFPVLYEQVCQG 60 Query: 271 WSRSFYTRADHMKAIMQYSISETPINTVNETLYQQAMMAVLERLSSLQRVRAFDVLTQLD 450 W+RSFYT HM+AI+ Y+ +TP T ++T++ QA AV L SL + RAFDV T+LD Sbjct: 61 WARSFYTLEGHMQAILAYAQPDTPRETFDQTIWDQAYTAVQNELRSLPKARAFDVNTELD 120 Query: 451 LVPFEPSSAAGYDYIGAKGELNGENHQRAIRRAKATLWSALAPDGEGMDHVVRTSVPDVG 630 VP+E SS+AGY Y KG GE H RAI R K TL +A+ PD EG ++ + SVPD+G Sbjct: 121 KVPYEQSSSAGYGYRSHKGPPGGETHMRAISRVKPTLMTAIRPDEEGPEYTILESVPDIG 180 Query: 631 YTRTQLTLIGEKTKVRGVWGRAFHYILLEGTTAAPLLEAFKQGDTFLHIGHDPTQSVPDL 810 YTRTQL + EKTKVRGVWGRAFHYIL+EGT A PLLE F G TF+HIG DP SVP + Sbjct: 181 YTRTQLADLREKTKVRGVWGRAFHYILIEGTAARPLLENFMLGTTFMHIGSDPQLSVPRI 240 Query: 811 LSRTASQ-CAWLIALDWTAFDASVSRFEIHAAFDILEKIIEF 933 L + + WL ALDW++FD+SV+RFEI+ AF++L++ IEF Sbjct: 241 LHQMKREGSKWLYALDWSSFDSSVTRFEINCAFNLLKERIEF 282 Score = 249 bits (636), Expect = 2e-63 Identities = 120/207 (57%), Positives = 149/207 (71%) Frame = +3 Query: 894 SCSIRYLGEDYRIPNSETLECFRICRHLFIHKKIAAPDGKNYWSHKGIPSGSYFTSIIGS 1073 +C+ L E PN ET F + R LF HKK+AAPDG Y HKGIPSGSY+TSI+GS Sbjct: 270 NCAFNLLKERIEFPNEETELAFELSRILFKHKKLAAPDGNIYMIHKGIPSGSYYTSIVGS 329 Query: 1074 IINRLRIEYIWRILKGRGPIICYTQGDDSLIGESEYTNPEDLAKIAESLNWYLNPAKTET 1253 ++NRLRIEYIWR+L R P CYTQGDDSLIGE+ PE +A+ A W +NP KTE Sbjct: 330 VVNRLRIEYIWRVLFSRSPHRCYTQGDDSLIGETFLVEPETVAREAAKYGWIMNPDKTEY 389 Query: 1254 SRSIEFVTFLGRTSYGGLNQRDLKRCLRLLIFPEHPVETGRISAFRARSIAQDAGHTSEV 1433 S +VTFLGRT++G +N R L +CLRLL+FPE+PV +GRISA+RA SIA+D G SEV Sbjct: 390 STDPGYVTFLGRTAHGFMNARSLDKCLRLLMFPEYPVTSGRISAYRAESIARDCGGLSEV 449 Query: 1434 LNTIAKRLRRKYGIAEASEVPRYLRPY 1514 +N +A+RLRR+YG+A EVP Y + Y Sbjct: 450 INLVARRLRRQYGVASEDEVPHYFKRY 476 >gb|ADE34113.1| putative RNA-dependent RNA polymerase [Pittosporum cryptic virus-1] Length = 225 Score = 195 bits (496), Expect(2) = 6e-75 Identities = 93/144 (64%), Positives = 111/144 (77%) Frame = +1 Query: 502 KGELNGENHQRAIRRAKATLWSALAPDGEGMDHVVRTSVPDVGYTRTQLTLIGEKTKVRG 681 KG+ +GENH+RAI RAKA LWSA+A DGEG++HV+ T VPDVGYTRTQLT + EKTKVR Sbjct: 1 KGQYDGENHKRAITRAKAVLWSAIADDGEGIEHVISTFVPDVGYTRTQLTDLLEKTKVRQ 60 Query: 682 VWGRAFHYILLEGTTAAPLLEAFKQGDTFLHIGHDPTQSVPDLLSRTASQCAWLIALDWT 861 VWGR FHYILLEG A+P + + DTF+H G DP SVP+LLS A C WL ALDW Sbjct: 61 VWGRCFHYILLEGLVASPFINELMKHDTFIHAGKDPIFSVPELLSNVARNCRWLYALDWK 120 Query: 862 AFDASVSRFEIHAAFDILEKIIEF 933 FDA+VSRFEI+ AFDI+++ I F Sbjct: 121 QFDATVSRFEINTAFDIIKRKIIF 144 Score = 114 bits (286), Expect(2) = 6e-75 Identities = 51/79 (64%), Positives = 61/79 (77%) Frame = +3 Query: 933 PNSETLECFRICRHLFIHKKIAAPDGKNYWSHKGIPSGSYFTSIIGSIINRLRIEYIWRI 1112 PN ET + F I R LFIHKK+AAPDG YWSHKGIPSGSY+TS++GSI+N L+I+Y+WR Sbjct: 145 PNYETEQAFEITRQLFIHKKVAAPDGYIYWSHKGIPSGSYYTSVVGSIVNFLKIDYLWRT 204 Query: 1113 LKGRGPIICYTQGDDSLIG 1169 L G P YT GDDS +G Sbjct: 205 LTGHPPKDLYTLGDDSFVG 223 >ref|YP_001274391.1| RNA-dependent RNA polymerase [Fragaria chiloensis cryptic virus] gi|117912931|gb|AAZ06131.2| RNA-dependent RNA polymerase [Fragaria chiloensis cryptic virus] Length = 479 Score = 160 bits (406), Expect(2) = 8e-71 Identities = 97/274 (35%), Positives = 146/274 (53%) Frame = +1 Query: 112 EYEFKDFTNDFEDLDETHVHRVRRETGVTYHDQFAMSELQDLYPNLYDQYLSGWSRSFYT 291 E+ F+ +L+E R+R E V + D ++ + + P L GW+RS+YT Sbjct: 2 EHRFRGIPRGLIELEEIPTRRLREER-VVHIDAWSSKAIDAIVPLSLRIELDGWARSYYT 60 Query: 292 RADHMKAIMQYSISETPINTVNETLYQQAMMAVLERLSSLQRVRAFDVLTQLDLVPFEPS 471 H+ +IMQY + P T + V + + + +V+ L QLD V + S Sbjct: 61 LQAHIDSIMQYDRPKLPQPT--NAAWNTTTQHVRTQFARMDKVQTLSYL-QLDQVKWVRS 117 Query: 472 SAAGYDYIGAKGELNGENHQRAIRRAKATLWSALAPDGEGMDHVVRTSVPDVGYTRTQLT 651 SAAGY Y+G K + +N+ RA R+ T+ L D + + S PD+ +TRTQL Sbjct: 118 SAAGYGYVGRKSD--NDNYFRA-RKTAFTIAEKLNHDRDYGPLALEDSTPDIAFTRTQLC 174 Query: 652 LIGEKTKVRGVWGRAFHYILLEGTTAAPLLEAFKQGDTFLHIGHDPTQSVPDLLSRTASQ 831 I K K+R VWG AFHY+LLEG A P+++ F + +F IG DP +VP L+ + S+ Sbjct: 175 QIKVKRKIRNVWGEAFHYVLLEGLFADPIIQHFIRNKSFYFIGEDPLLAVPRLVEKILSE 234 Query: 832 CAWLIALDWTAFDASVSRFEIHAAFDILEKIIEF 933 ++ DW+ FDASV +EI AF +LE I+ F Sbjct: 235 QDYVYMFDWSGFDASVQEWEIRFAFSLLESILIF 268 Score = 135 bits (340), Expect(2) = 8e-71 Identities = 81/186 (43%), Positives = 110/186 (59%), Gaps = 2/186 (1%) Frame = +3 Query: 933 PNSETLECFRICRHLFIHKKIAAPDGKNYWSHKGIPSGSYFTSIIGSIINRLRIEYIWRI 1112 P+S + LFI++KIAAP+GK Y GIPSGS FT+IIGSI+N +RI+Y++ Sbjct: 269 PSSVESYIWHFIIELFIYRKIAAPNGKVYLKTLGIPSGSCFTNIIGSIVNYVRIQYLFFR 328 Query: 1113 LKGRGPIICYTQGDDSLIGES--EYTNPEDLAKIAESLNWYLNPAKTETSRSIEFVTFLG 1286 L + +T GDDSL+G S +Y ++ I NW +N AK+ S E V+FL Sbjct: 329 LTNNF-VTVFTHGDDSLVGVSTTQYVQMDNFEPICAEHNWTINIAKSAVSHEAEGVSFLS 387 Query: 1287 RTSYGGLNQRDLKRCLRLLIFPEHPVETGRISAFRARSIAQDAGHTSEVLNTIAKRLRRK 1466 R + RD CLR+L FPE+ VE+G +S RA SI QDAG S L +I K L + Sbjct: 388 RKVREHCHARDELLCLRMLKFPEYVVESGAMSTLRAHSIHQDAGINSRYLYSIYKYLLHR 447 Query: 1467 YGIAEA 1484 YG A++ Sbjct: 448 YGKADS 453 >gb|AAY51483.1| putative RNA-dependent RNA polymerase [Pinus sylvestris partitivirus NL-2005] Length = 358 Score = 134 bits (336), Expect(2) = 4e-57 Identities = 79/196 (40%), Positives = 114/196 (58%), Gaps = 3/196 (1%) Frame = +3 Query: 936 NSETLE-CFRICRHLFIHKKIAAPDGKNYWSHKGIPSGSYFTSIIGSIINRLRIEYIWRI 1112 NSE E CF + R FIH+K+ P+G+ H+GIPSGSY+T ++ +IIN RI Y++ Sbjct: 156 NSELDELCFEVSRLNFIHRKLIDPEGRILLKHRGIPSGSYYTMLVDTIINARRILYMFHH 215 Query: 1113 LKGRGPIICYTQGDDSLIGESE--YTNPEDLAKIAESLNWYLNPAKTETSRSIEFVTFLG 1286 L G P + + QGDDSL G + +A I + W +NP K + SR E + +LG Sbjct: 216 LTGELPTV-HCQGDDSLTGVRPDFQVSRGHIAAICKEQAWDINPDKLKISRYPEELEYLG 274 Query: 1287 RTSYGGLNQRDLKRCLRLLIFPEHPVETGRISAFRARSIAQDAGHTSEVLNTIAKRLRRK 1466 RTS G N R+ ++ +RL IF E+PV + +ISA RA ++ D+ + L K L R+ Sbjct: 275 RTSSGDYNHRERQKVIRLAIFTEYPVTSPQISAARAHALCIDSSYRIPELVQAWKSLTRQ 334 Query: 1467 YGIAEASEVPRYLRPY 1514 YG ++ R LRPY Sbjct: 335 YGEVPPEQLDRRLRPY 350 Score = 116 bits (291), Expect(2) = 4e-57 Identities = 64/160 (40%), Positives = 95/160 (59%), Gaps = 4/160 (2%) Frame = +1 Query: 472 SAAGYDYIGAKGELNGENHQRAIRRAKATLWSA----LAPDGEGMDHVVRTSVPDVGYTR 639 SAAGY Y G KG+ NH RA+R A AT+ ++ + + + + + PD+ +TR Sbjct: 1 SAAGYGYTGRKGDPG--NHIRAVRTANATIRDLADQMISNQSQTVYNWLMYTTPDIAFTR 58 Query: 640 TQLTLIGEKTKVRGVWGRAFHYILLEGTTAAPLLEAFKQGDTFLHIGHDPTQSVPDLLSR 819 TQL+ + +K K+R VWG FH IL+EG TA PL+E F + TF IG DP VP ++S Sbjct: 59 TQLSYLPDKMKIRNVWGAPFHSILIEGLTAQPLMEYFARHRTFFTIGEDPKIRVPQIISE 118 Query: 820 TASQCAWLIALDWTAFDASVSRFEIHAAFDILEKIIEFQT 939 Q + +DW+ FDASVS I AF ++++++ F + Sbjct: 119 LV-QNRTVYCIDWSGFDASVSAEGIDFAFSLIKRMLTFNS 157 >ref|XP_006841815.1| hypothetical protein AMTR_s00003p00269640 [Amborella trichopoda] gi|548843836|gb|ERN03490.1| hypothetical protein AMTR_s00003p00269640 [Amborella trichopoda] Length = 314 Score = 131 bits (329), Expect(2) = 9e-42 Identities = 73/184 (39%), Positives = 97/184 (52%) Frame = +1 Query: 388 VLERLSSLQRVRAFDVLTQLDLVPFEPSSAAGYDYIGAKGELNGENHQRAIRRAKATLWS 567 V +S RV + T +D +P+E SSAAGY Y G KGE + A R+ Sbjct: 2 VAREFNSFPRVTSLSFETGIDTIPYESSSAAGYGYFGRKGEDITAHGLAAARK------- 54 Query: 568 ALAPDGEGMDHVVRTSVPDVGYTRTQLTLIGEKTKVRGVWGRAFHYILLEGTTAAPLLEA 747 +V +PD+G+ RTQL + KVR V+G AFHY L+EG +A P+L Sbjct: 55 ----------RIVDNGMPDIGFMRTQLARL-TLIKVRNVFGEAFHYGLIEGLSAYPVLPV 103 Query: 748 FKQGDTFLHIGHDPTQSVPDLLSRTASQCAWLIALDWTAFDASVSRFEIHAAFDILEKII 927 FK DTF IG DPT VP +L + C W + LDW+ FDA V +EI F +E ++ Sbjct: 104 FKNLDTFYLIGKDPTFGVPAILDEISHDCRWFMVLDWSRFDALVQHWEIDVTFSCIESMV 163 Query: 928 EFQT 939 EF T Sbjct: 164 EFPT 167 Score = 68.2 bits (165), Expect(2) = 9e-42 Identities = 53/148 (35%), Positives = 71/148 (47%), Gaps = 4/148 (2%) Frame = +3 Query: 933 PNSETLECFRICRHLFIHKKIAAPDGKNYWSHKGIPSGSYFTSIIG-SIINRLRIEYIWR 1109 P T F LF K+ PDG + IPS SYFT+++G SIIN +++ Y+ Sbjct: 166 PTHLTRVAFEYAWTLFKKHKLIVPDGMLWMRDSEIPSESYFTNLVGSSIINYVKLRYL-- 223 Query: 1110 ILKGRGPII-CYTQGDDSLIGESEYTNPE--DLAKIAESLNWYLNPAKTETSRSIEFVTF 1280 L+ P I QG DSL G E + P+ A+I E L W + P K + F Sbjct: 224 CLRSNLPTIRIRVQGADSLTGIGEASPPDIRFFAEIGEPLGWTVKPWKCTIFLHPNEIQF 283 Query: 1281 LGRTSYGGLNQRDLKRCLRLLIFPEHPV 1364 LGR++ N R + LRLL F E V Sbjct: 284 LGRSACVRYNTRYRLKALRLLCFLEFKV 311 >ref|YP_004429258.1| RNA-dependent RNA polymerase [Fig cryptic virus] gi|332163669|emb|CBW77436.1| RNA-dependent RNA polymerase [Fig cryptic virus] Length = 472 Score = 164 bits (414), Expect = 1e-37 Identities = 109/280 (38%), Positives = 156/280 (55%), Gaps = 5/280 (1%) Frame = +1 Query: 181 RETGVTYHDQFAMSELQDLYPNLYDQYLSGWSRSFYTRADHMKAIMQYSISETPINTVNE 360 R+ + DQ A ++ P Q + GW+RSFYT M +IMQ+S + I+ + Sbjct: 17 RDEFIILVDQPAYDSVRRNAPQADMQEIDGWARSFYTVEGIMASIMQFS--KPLIHEPTD 74 Query: 361 TLYQQAMMAVLERLSSL-QRVRAFDVLTQLDLVPFEPSSAAGYDYIGAKGELNGENHQRA 537 ++ L ++ SL +V++ D VPFE SS+AGY Y G KGE N + ++ Sbjct: 75 PIWNDVKRETLMKIGSLFPQVQSLPFEGGFDHVPFESSSSAGYGYDGKKGEGNNFHRAKS 134 Query: 538 IRRAKATLWSALAPDGEGMD----HVVRTSVPDVGYTRTQLTLIGEKTKVRGVWGRAFHY 705 I A +S D +G D H+++ PD+ +TRTQL + KVR V+G AFH Sbjct: 135 IANAAVRKFSEDI-DNQGYDYAVSHLIQQGTPDIAFTRTQLAKL-PSIKVRIVFGEAFHN 192 Query: 706 ILLEGTTAAPLLEAFKQGDTFLHIGHDPTQSVPDLLSRTASQCAWLIALDWTAFDASVSR 885 IL+EG +AAPLLEAFK+ DTF G DPT VP +L + ++ W I LDW AFDASV Sbjct: 193 ILIEGLSAAPLLEAFKRMDTFYFTGKDPTIYVPRILHKMSTNEGWFICLDWKAFDASVQL 252 Query: 886 FEIHAAFDILEKIIEFQTLKH*SVLEFVGIYLSTRKSLRQ 1005 +EI AF+ +++++ F T S L F L TR+S +Q Sbjct: 253 WEIDHAFNCIQQLLAFPT--ELSRLAF----LFTRESFKQ 286 Score = 130 bits (327), Expect = 2e-27 Identities = 78/188 (41%), Positives = 108/188 (57%), Gaps = 2/188 (1%) Frame = +3 Query: 957 FRICRHLFIHKKIAAPDGKNYWSHKGIPSGSYFTSIIGSIINRLRIEYIWRILKGRGPII 1136 F R F +K+A P+G + GIPSGSY+T+IIGS+IN RIEY+ + L G Sbjct: 277 FLFTRESFKQRKLADPNGILWMRKGGIPSGSYYTNIIGSVINYNRIEYVCKRL-GLQKTS 335 Query: 1137 CYTQGDDSLIGESEYTNPE--DLAKIAESLNWYLNPAKTETSRSIEFVTFLGRTSYGGLN 1310 CY QGDDSLI + P+ L + E W LN K ++ + VTFLGR+ LN Sbjct: 336 CYVQGDDSLIHITGDAKPDLTQLQMLGEQFGWTLNIPKCSLTQDSQLVTFLGRSQMHQLN 395 Query: 1311 QRDLKRCLRLLIFPEHPVETGRISAFRARSIAQDAGHTSEVLNTIAKRLRRKYGIAEASE 1490 R+ + LRL+ FPE+ VE +IS R ++IA+DAG + V N I +L+R YG E Sbjct: 396 IRERLKVLRLMCFPEYKVEDPKISTTRVKAIARDAGWSDPVYNKIYLQLKRLYG--EVER 453 Query: 1491 VPRYLRPY 1514 +P +L + Sbjct: 454 LPPHLATF 461 >gb|ABV89762.1| putative RNA-dependent RNA polymerase [Rosa multiflora cryptic virus] Length = 479 Score = 161 bits (407), Expect = 9e-37 Identities = 99/286 (34%), Positives = 149/286 (52%) Frame = +1 Query: 112 EYEFKDFTNDFEDLDETHVHRVRRETGVTYHDQFAMSELQDLYPNLYDQYLSGWSRSFYT 291 E+ F+ +L+E R+R E V + D ++ + + P L GW+RS+YT Sbjct: 2 EHRFRGIPRGLIELEEIPTRRLREEC-VIHIDAWSSQAIDAIVPLSLRNELDGWARSYYT 60 Query: 292 RADHMKAIMQYSISETPINTVNETLYQQAMMAVLERLSSLQRVRAFDVLTQLDLVPFEPS 471 H+ ++MQY + T + + + +++V A L QLD V + S Sbjct: 61 LQAHVDSLMQYD--RPKLQPPTNTAWNITTQYIRTEFARMKKVTALSYL-QLDQVKWVRS 117 Query: 472 SAAGYDYIGAKGELNGENHQRAIRRAKATLWSALAPDGEGMDHVVRTSVPDVGYTRTQLT 651 SAAGY Y G K + G+N+ RA R+ TL L + + + S PDV +TRTQL Sbjct: 118 SAAGYGYTGRKSD--GDNYIRA-RKTAFTLAEKLNHNRDYGPLALEDSTPDVAFTRTQLC 174 Query: 652 LIGEKTKVRGVWGRAFHYILLEGTTAAPLLEAFKQGDTFLHIGHDPTQSVPDLLSRTASQ 831 I K K+R VWG AFHY+LLEG A PL++ F + +F IG DP +VP L+ S+ Sbjct: 175 QIKVKRKIRNVWGEAFHYVLLEGLFADPLIQQFMRIKSFYFIGEDPLLAVPRLIEEILSE 234 Query: 832 CAWLIALDWTAFDASVSRFEIHAAFDILEKIIEFQTLKH*SVLEFV 969 ++ DW+ FDASV +E+ AF +LE I+ F + V +F+ Sbjct: 235 QDYIYMFDWSGFDASVQEWELRFAFGLLESILIFPSSVEHQVWQFI 280 Score = 134 bits (336), Expect = 1e-28 Identities = 82/186 (44%), Positives = 113/186 (60%), Gaps = 2/186 (1%) Frame = +3 Query: 933 PNSETLECFRICRHLFIHKKIAAPDGKNYWSHKGIPSGSYFTSIIGSIINRLRIEYIWRI 1112 P+S + ++ LFI++KIAAP+GK Y GIPSGS FT+IIGSI+N +RI+Y++ Sbjct: 269 PSSVEHQVWQFIIELFIYRKIAAPNGKIYLKTLGIPSGSCFTNIIGSIVNYVRIQYMFFR 328 Query: 1113 LKGRGPIICYTQGDDSLIG--ESEYTNPEDLAKIAESLNWYLNPAKTETSRSIEFVTFLG 1286 L R + +T GDDSL+G ++Y E+ I + W +N AK+ SR E V+FL Sbjct: 329 LT-REFVTAFTHGDDSLVGVPTTQYVQMENFKPICDENLWTINIAKSAISREAEGVSFLS 387 Query: 1287 RTSYGGLNQRDLKRCLRLLIFPEHPVETGRISAFRARSIAQDAGHTSEVLNTIAKRLRRK 1466 R + RD CLR+L FPE+ VETG +S RA SI +DAG S L I K L + Sbjct: 388 RKVREMCHARDELICLRMLKFPEYIVETGAMSTLRAFSIHKDAGINSRYLYQIYKFLLHR 447 Query: 1467 YGIAEA 1484 YG A++ Sbjct: 448 YGKADS 453 >ref|YP_001686786.1| RNA-dependent RNA polymerase [Rose cryptic virus 1] gi|167077473|gb|ABZ10945.1| RNA-dependent RNA polymerase [Rose cryptic virus 1] Length = 479 Score = 161 bits (407), Expect = 9e-37 Identities = 99/286 (34%), Positives = 149/286 (52%) Frame = +1 Query: 112 EYEFKDFTNDFEDLDETHVHRVRRETGVTYHDQFAMSELQDLYPNLYDQYLSGWSRSFYT 291 E+ F+ +L+E R+R E V + D ++ + + P L GW+RS+YT Sbjct: 2 EHRFRGIPRGLIELEEIPTRRLREEC-VIHIDAWSSQAIDAIVPLSLRNELDGWARSYYT 60 Query: 292 RADHMKAIMQYSISETPINTVNETLYQQAMMAVLERLSSLQRVRAFDVLTQLDLVPFEPS 471 H+ ++MQY + T + + + +++V A L QLD V + S Sbjct: 61 LQAHVDSLMQYD--RPKLQPPTNTAWNITTQYIRTEFARMKKVTALSYL-QLDQVKWVRS 117 Query: 472 SAAGYDYIGAKGELNGENHQRAIRRAKATLWSALAPDGEGMDHVVRTSVPDVGYTRTQLT 651 SAAGY Y G K + G+N+ RA R+ TL L + + + S PDV +TRTQL Sbjct: 118 SAAGYGYTGRKSD--GDNYIRA-RKTAFTLAEKLNHNRDYGPLALEDSTPDVAFTRTQLC 174 Query: 652 LIGEKTKVRGVWGRAFHYILLEGTTAAPLLEAFKQGDTFLHIGHDPTQSVPDLLSRTASQ 831 I K K+R VWG AFHY+LLEG A PL++ F + +F IG DP +VP L+ S+ Sbjct: 175 QIKVKRKIRNVWGEAFHYVLLEGLFADPLIQQFMRIKSFYFIGEDPLLAVPRLIEEILSE 234 Query: 832 CAWLIALDWTAFDASVSRFEIHAAFDILEKIIEFQTLKH*SVLEFV 969 ++ DW+ FDASV +E+ AF +LE I+ F + V +F+ Sbjct: 235 QDYIYMFDWSGFDASVQEWELRFAFGLLESILIFPSSVEHQVWQFI 280 Score = 133 bits (334), Expect = 3e-28 Identities = 82/186 (44%), Positives = 113/186 (60%), Gaps = 2/186 (1%) Frame = +3 Query: 933 PNSETLECFRICRHLFIHKKIAAPDGKNYWSHKGIPSGSYFTSIIGSIINRLRIEYIWRI 1112 P+S + ++ LFI++KIAAP+GK Y GIPSGS FT+IIGSI+N +RI+Y++ Sbjct: 269 PSSVEHQVWQFIIELFIYRKIAAPNGKIYLKTLGIPSGSCFTNIIGSIVNYVRIQYMFFR 328 Query: 1113 LKGRGPIICYTQGDDSLIG--ESEYTNPEDLAKIAESLNWYLNPAKTETSRSIEFVTFLG 1286 L R + +T GDDSL+G ++Y E+ I + W +N AK+ SR E V+FL Sbjct: 329 LT-REFVTAFTHGDDSLVGVPTTQYVQMENFKPICDENLWTINIAKSAISREAEGVSFLS 387 Query: 1287 RTSYGGLNQRDLKRCLRLLIFPEHPVETGRISAFRARSIAQDAGHTSEVLNTIAKRLRRK 1466 R + RD CLR+L FPE+ VETG +S RA SI +DAG S L I K L + Sbjct: 388 RKVREMCHARDELICLRMLKFPEYIVETGAMSTLRAFSIHKDAGIHSRYLYQIYKFLLHR 447 Query: 1467 YGIAEA 1484 YG A++ Sbjct: 448 YGKADS 453 >ref|YP_009026407.1| RNA dependent RNA polymerase [Pigeon pea latent virus] gi|575096426|emb|CDL67777.1| RNA dependent RNA polymerase [Pigeon pea latent virus] Length = 475 Score = 159 bits (403), Expect = 3e-36 Identities = 98/286 (34%), Positives = 149/286 (52%) Frame = +1 Query: 112 EYEFKDFTNDFEDLDETHVHRVRRETGVTYHDQFAMSELQDLYPNLYDQYLSGWSRSFYT 291 ++ ++ T L+E R+R E + D++A + P L GW+RS+YT Sbjct: 2 DHRWRGATRGLIRLEEIPTRRIRDERRILI-DEYASEAINRYVPLHLRAELEGWARSYYT 60 Query: 292 RADHMKAIMQYSISETPINTVNETLYQQAMMAVLERLSSLQRVRAFDVLTQLDLVPFEPS 471 H+ AIM Y ++ ++ + M V E+ + +V A LD V + S Sbjct: 61 LETHLNAIMNYD--RPKLSQPSDAAWVSTMHHVREQFRQMDKVTALSHY-HLDKVKWVRS 117 Query: 472 SAAGYDYIGAKGELNGENHQRAIRRAKATLWSALAPDGEGMDHVVRTSVPDVGYTRTQLT 651 SAAGY Y+G K + N++RA R T+ L + + ++ S PDV +TRTQL Sbjct: 118 SAAGYGYVGLKSDPG--NYERA-RTTAFTIAERLNHERDYAPEALKNSTPDVAFTRTQLC 174 Query: 652 LIGEKTKVRGVWGRAFHYILLEGTTAAPLLEAFKQGDTFLHIGHDPTQSVPDLLSRTASQ 831 I K KVR VWG AFHY+LLEG A PL++ F + D+F IG DP +VP L+ S+ Sbjct: 175 QIKIKRKVRNVWGEAFHYVLLEGLFADPLIQHFMKIDSFYFIGQDPLLAVPYLIEDILSE 234 Query: 832 CAWLIALDWTAFDASVSRFEIHAAFDILEKIIEFQTLKH*SVLEFV 969 ++ DW+ FD+SV +EI AF++LE ++ F + V F+ Sbjct: 235 SDYVYMFDWSGFDSSVHEWEIRFAFELLESLLVFPSSVEQHVWRFI 280 Score = 143 bits (361), Expect = 2e-31 Identities = 84/186 (45%), Positives = 116/186 (62%), Gaps = 2/186 (1%) Frame = +3 Query: 933 PNSETLECFRICRHLFIHKKIAAPDGKNYWSHKGIPSGSYFTSIIGSIINRLRIEYIWRI 1112 P+S +R LFI++KIA+P+G Y +GIPSGS FT+IIGSI N +RI+YI+R Sbjct: 269 PSSVEQHVWRFIIELFIYRKIASPNGVMYLKTQGIPSGSCFTNIIGSITNYVRIQYIFRR 328 Query: 1113 LKGRGPIICYTQGDDSLIGES--EYTNPEDLAKIAESLNWYLNPAKTETSRSIEFVTFLG 1286 L R + +T GDDSL G S ++ E++A++ NW +N K++ SR E VTFL Sbjct: 329 LTNRFANV-FTHGDDSLAGVSAVQFIPMENIAQVCAEFNWTINVDKSDVSRIAEAVTFLS 387 Query: 1287 RTSYGGLNQRDLKRCLRLLIFPEHPVETGRISAFRARSIAQDAGHTSEVLNTIAKRLRRK 1466 R + RD CLR+L +PE+PVE+G +S RA SI++DAG S L I K L K Sbjct: 388 RNVREMSHARDELTCLRMLKYPEYPVESGAVSTLRALSISKDAGLNSHYLYKIYKFLDIK 447 Query: 1467 YGIAEA 1484 YG A++ Sbjct: 448 YGKADS 453