BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia25_contig00006647
         (2568 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282072.2| PREDICTED: uncharacterized protein LOC100268...   689   0.0  
ref|XP_007044904.1| RNA-binding family protein isoform 1 [Theobr...   629   e-177
ref|XP_007044902.1| RNA-binding family protein isoform 1 [Theobr...   625   e-176
ref|XP_007225677.1| hypothetical protein PRUPE_ppa002814mg [Prun...   623   e-175
ref|XP_007044908.1| RNA-binding family protein isoform 5, partia...   614   e-173
ref|XP_002515040.1| RNA binding protein, putative [Ricinus commu...   607   e-171
ref|XP_007044907.1| RNA-binding family protein isoform 4 [Theobr...   600   e-168
ref|XP_004310003.1| PREDICTED: uncharacterized protein LOC101309...   570   e-160
ref|XP_007044909.1| RNA-binding family protein isoform 6 [Theobr...   563   e-157
gb|EXB82464.1| Cleavage and polyadenylation specificity factor s...   551   e-154
ref|XP_006341786.1| PREDICTED: cleavage and polyadenylation spec...   532   e-148
ref|XP_002312652.1| RNA recognition motif-containing family prot...   521   e-145
ref|XP_006378268.1| hypothetical protein POPTR_0010s06150g [Popu...   493   e-136
gb|EYU30596.1| hypothetical protein MIMGU_mgv1a002773mg [Mimulus...   467   e-128
ref|XP_002315647.1| RNA recognition motif-containing family prot...   455   e-125
ref|XP_006483997.1| PREDICTED: cleavage and polyadenylation spec...   390   e-105
ref|XP_006438179.1| hypothetical protein CICLE_v10030915mg [Citr...   389   e-105
ref|XP_006483998.1| PREDICTED: cleavage and polyadenylation spec...   383   e-103
ref|XP_006438180.1| hypothetical protein CICLE_v10030917mg [Citr...   378   e-102
ref|XP_002889992.1| RNA recognition motif-containing protein [Ar...   327   2e-86

>ref|XP_002282072.2| PREDICTED: uncharacterized protein LOC100268141 isoform 1 [Vitis
            vinifera] gi|359473133|ref|XP_003631251.1| PREDICTED:
            uncharacterized protein LOC100268141 isoform 2 [Vitis
            vinifera]
          Length = 647

 Score =  689 bits (1777), Expect = 0.0
 Identities = 376/663 (56%), Positives = 411/663 (61%), Gaps = 1/663 (0%)
 Frame = +2

Query: 149  MAEEQLDYEDEEXXXXXXXXXXXXXXISXXXXXXXXXXXXXXXXXXXXXXXXEGFLQMHR 328
            MAEEQLDYEDEE              IS                        EGFLQMHR
Sbjct: 1    MAEEQLDYEDEEYGGAQKMPFQGGGAISALADDELMGEDDEYDDLYNDVNVGEGFLQMHR 60

Query: 329  SEAPVRTGIGNGG-LQAQKTDVLESTLEAGGSQGLSIPGVSAEGKYSNAAHFPDQRVGPL 505
            SEAP  +G+  GG  QA KTDV    LEAG SQGL IPGVS EGKYSN  HF +++ GP+
Sbjct: 61   SEAPAPSGVMAGGPFQAHKTDVPPQKLEAGTSQGLIIPGVSIEGKYSNP-HFHEKKEGPM 119

Query: 506  AAKGPELGSVNYTDGALVSQKGRVNEMTTDGQVRNLGFQGSTLIPHKSGVDSTNMPGKIV 685
            A KGPE+GS ++ DG  VSQKGRV EMT D QVRNLGFQGST IP K+G + +++ GKI 
Sbjct: 120  AVKGPEMGSTSHLDGPSVSQKGRVLEMTHDTQVRNLGFQGSTPIPQKTGAEPSDVHGKIA 179

Query: 686  SESAPLLNSDPGGPRGAPQISXXXXXXXXXXXXXXXXXXXXDNQIRVNENQIRPSVENGP 865
            +ES P+LNS  GGPR  PQ+                      N+  VNENQIRP+V+NG 
Sbjct: 180  NESTPVLNSGTGGPRAVPQMLSNQMGMNVNV-----------NRPMVNENQIRPAVDNGA 228

Query: 866  TMLFVGELHWWTTDSELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFYDPGAASACKE 1045
            TMLFVGELHWWTTD+ELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFYD  AA+ACKE
Sbjct: 229  TMLFVGELHWWTTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFYDASAAAACKE 288

Query: 1046 GMNGYLFNGRACVVAFASPQTLKQMGASYMNKSQVQPQINQQQGRRPMNDGVGRGGGMNY 1225
            GMNGY+FNGRACVVAFASPQTLKQMGASYMNK+Q Q   +Q QGRRPMNDGVGRGGGMN 
Sbjct: 289  GMNGYIFNGRACVVAFASPQTLKQMGASYMNKTQAQ---SQSQGRRPMNDGVGRGGGMNM 345

Query: 1226 SXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVGPKNMVXXXXXXXXXXXXXX 1405
                                                  AVG KNMV              
Sbjct: 346  Q-GGDAGRNYGRGGWGRGGQGILNRGPGGGGPMRGRGGAVGAKNMV--GNTAGVGASGGG 402

Query: 1406 XXXXXXXXXXXXXXXXMMHPQNMMGAGFDPTYMXXXXXXXXXXXXXXXXMIPSFPAVNTM 1585
                            +MHPQ MMG+GFDPTYM                M+PSFPAVNTM
Sbjct: 403  YGQGLAGPTFGGPAGGLMHPQGMMGSGFDPTYMGRGGAYGGFSGSAFPGMVPSFPAVNTM 462

Query: 1586 GLAGVAPHVNPAFFGRXXXXXXXXXXXXXXXDAHHAGMWTDTSMGGWGGDEHGRRTRESS 1765
            GLAGVAPHVNPAFFGR               D HHAGMWTDTSMGGWGG+EHGRRTRESS
Sbjct: 463  GLAGVAPHVNPAFFGRGMAANGMGMMGATGMDGHHAGMWTDTSMGGWGGEEHGRRTRESS 522

Query: 1766 YGGDDGASEYGYGEASHEKGVRSNAAPREKERGSEREWSGNSXXXXXXXXXXXXXXXXXX 1945
            YGGDDGAS+YGYGE +HEK  RSN A REKERGSER+WSGNS                  
Sbjct: 523  YGGDDGASDYGYGEVNHEKVGRSNTASREKERGSERDWSGNSERRHRDEREQDWERSDKD 582

Query: 1946 XXYREEKDSYRDHRHRERDLVNEDEWDRGQXXXXXXXXXXVMPEEDHRSRSRDVDYGKRR 2125
              YREEKD YRDHR RERD  NED+WDRGQ           + +EDHRSRSRD DYGKRR
Sbjct: 583  HRYREEKDGYRDHRQRERDFNNEDDWDRGQSSSRSRSRSRAVADEDHRSRSRDGDYGKRR 642

Query: 2126 RLP 2134
            RLP
Sbjct: 643  RLP 645


>ref|XP_007044904.1| RNA-binding family protein isoform 1 [Theobroma cacao]
            gi|590695496|ref|XP_007044905.1| RNA-binding family
            protein isoform 1 [Theobroma cacao]
            gi|590695500|ref|XP_007044906.1| RNA-binding family
            protein isoform 1 [Theobroma cacao]
            gi|508708839|gb|EOY00736.1| RNA-binding family protein
            isoform 1 [Theobroma cacao] gi|508708840|gb|EOY00737.1|
            RNA-binding family protein isoform 1 [Theobroma cacao]
            gi|508708841|gb|EOY00738.1| RNA-binding family protein
            isoform 1 [Theobroma cacao]
          Length = 652

 Score =  629 bits (1623), Expect = e-177
 Identities = 348/670 (51%), Positives = 403/670 (60%), Gaps = 5/670 (0%)
 Frame = +2

Query: 140  MDPMAEEQLDYEDEEXXXXXXXXXXXXXXISXXXXXXXXXXXXXXXXXXXXXXXXEGFLQ 319
            MD MAEEQ+D+ DEE              I                         EGFLQ
Sbjct: 1    MDAMAEEQIDFGDEEYGGGQKMQYQGSGAIPALADEEMMGEDDEYDDLYNDVNVGEGFLQ 60

Query: 320  MHRSEAPVRTG-IGNGGLQAQKTDVLESTLEAGGSQGLSIPGVSAEGKYSN-AAHFPDQR 493
            + RSEAP++ G +G+ GL+AQ+ +  E  +EAGGSQGL+IPGVS +GK+ N +A +P++ 
Sbjct: 61   LQRSEAPLQPGGLGSTGLKAQRNEAPEPRVEAGGSQGLNIPGVSVQGKHPNVSARYPEKE 120

Query: 494  VGPLAAKGPELGSVNYTDGALVSQKGRVNEMTTDGQVRNLGFQGSTLIPHKSGVDSTNMP 673
              P A   PE+ S +Y  G+ +SQKG V E T D QV+NLGFQG T   +K G+D + +P
Sbjct: 121  EQP-AVNRPEMVSGSYPSGSSISQKGSVTEGTHDKQVKNLGFQGLTSASNKVGIDPSGVP 179

Query: 674  GKIVSESAPLLNSDPGGPRGAPQISXXXXXXXXXXXXXXXXXXXXDNQIRVNENQIRPSV 853
             KI ++ A  LNS  GGP+G P +                      N   +NENQ++P +
Sbjct: 180  QKIANDPAQSLNSGTGGPQGPPHVPPNQMGTNV-------------NHPVMNENQVQPPI 226

Query: 854  ENGPTMLFVGELHWWTTDSELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFYDPGAAS 1033
            ENGPTMLFVGELHWWTTD+ELESVLSQYGR+KEIKFFDE+ASGKSKGYCQVEFYDP +A+
Sbjct: 227  ENGPTMLFVGELHWWTTDAELESVLSQYGRLKEIKFFDEKASGKSKGYCQVEFYDPSSAA 286

Query: 1034 ACKEGMNGYLFNGRACVVAFASPQTLKQMGASYMNKSQVQPQINQQQGRRPMNDGVGRGG 1213
             CKEGMNGY+FNGRACVVAFASPQTLKQMGASYMNK+Q Q Q  Q QGRRP N+G+GRGG
Sbjct: 287  VCKEGMNGYMFNGRACVVAFASPQTLKQMGASYMNKNQGQSQA-QPQGRRP-NEGLGRGG 344

Query: 1214 GMNYSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVGPKNMVXXXXXXXXXX 1393
             +NY                                       VG KNMV          
Sbjct: 345  NLNYQ---SGDAGRNYGRGGWGRGGQGGVNRAGGGGLMRGRGGVGVKNMVGISAGVGNGA 401

Query: 1394 XXXXXXXXXXXXXXXXXXXXMMHPQNMMGAGFDPTYMXXXXXXXXXXXXXXXXMIPSFPA 1573
                                MMHPQ MMGAGFDPTYM                M+PSFPA
Sbjct: 402  NGAGAYGQGPGPAFGGPAGGMMHPQGMMGAGFDPTYMVRGGGYGGFPGPGFPGMLPSFPA 461

Query: 1574 VNTMGLAGVAPHVNPAFFGRXXXXXXXXXXXXXXXDAHHAGMWTDTSMGGWGGDEHGRRT 1753
            VNTMGLAGVAPHVNPAFFGR               D  HAGMWTD SMGGWGGDEHGRRT
Sbjct: 462  VNTMGLAGVAPHVNPAFFGRGMAPNGMGMMGASGMDGPHAGMWTDASMGGWGGDEHGRRT 521

Query: 1754 RESSYGGDDGASEYGYGEASHEKGVRSNAAPREKERGSEREWSGNS---XXXXXXXXXXX 1924
            RESSYGG+DGASEYGYG+A+HEKG RS+ A REKER SEREWSGNS              
Sbjct: 522  RESSYGGEDGASEYGYGDANHEKG-RSSGASREKERVSEREWSGNSDRRHRDEKEQDWDR 580

Query: 1925 XXXXXXXXXYREEKDSYRDHRHRERDLVNEDEWDRGQXXXXXXXXXXVMPEEDHRSRSRD 2104
                     YREEKDSYR+HRHRERDL  +D+WDRGQ           MPEE+HRSRSRD
Sbjct: 581  SEREHREHRYREEKDSYREHRHRERDLDYDDDWDRGQSSSRSRRRSHAMPEEEHRSRSRD 640

Query: 2105 VDYGKRRRLP 2134
            VDYGK+RRLP
Sbjct: 641  VDYGKKRRLP 650


>ref|XP_007044902.1| RNA-binding family protein isoform 1 [Theobroma cacao]
            gi|590695488|ref|XP_007044903.1| RNA-binding family
            protein isoform 1 [Theobroma cacao]
            gi|508708837|gb|EOY00734.1| RNA-binding family protein
            isoform 1 [Theobroma cacao] gi|508708838|gb|EOY00735.1|
            RNA-binding family protein isoform 1 [Theobroma cacao]
          Length = 653

 Score =  625 bits (1613), Expect = e-176
 Identities = 353/671 (52%), Positives = 400/671 (59%), Gaps = 6/671 (0%)
 Frame = +2

Query: 140  MDPMAEEQLDYEDEEXXXXXXXXXXXXXXISXXXXXXXXXXXXXXXXXXXXXXXXEGFLQ 319
            MD MAEEQ+D+ DEE              I                         EGFLQ
Sbjct: 1    MDAMAEEQIDFGDEEYGGAQKMQYQGSGAIPALADEEMMGEDDEYDDLYNDVNVGEGFLQ 60

Query: 320  MHRSEAPVRTG-IGNGGLQAQKTDVLESTLEAGGSQGLSIPGVSAEGKYSNA-AHFPDQR 493
            + RSEAP + G +G+ GLQAQK +  E   EAGGSQGL+IPGVS +GK+ N  A +P+Q 
Sbjct: 61   LQRSEAPPQPGGMGSTGLQAQKNEAPEPRGEAGGSQGLNIPGVSVQGKHLNVTARYPEQD 120

Query: 494  VGPLAAKGPELGSVNYTDGALVSQKGRVNEMTTDGQVRNLGFQGSTLIPHKSGVDSTNMP 673
              P  ++ PE+GS +Y  G  +SQKGRV E T D QV+N+GFQG +   HK G+D + +P
Sbjct: 121  GQPAVSR-PEMGSGSYPSGTSISQKGRVMEGTQDTQVKNMGFQGLSSASHKVGIDPSGVP 179

Query: 674  GKIVSESAPLLNSDPGGPRGAPQISXXXXXXXXXXXXXXXXXXXXDNQIRVNENQIRPSV 853
             KI +  A  LNS  GGP+GAP +                      N   ++ENQ+RP +
Sbjct: 180  QKIANVPAQSLNSGTGGPQGAPHVPPNQMGLNV-------------NHPMISENQVRPPI 226

Query: 854  ENGPTMLFVGELHWWTTDSELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFYDPGAAS 1033
            ENGPTMLFVGELHWWTTD+ELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFYDP +A+
Sbjct: 227  ENGPTMLFVGELHWWTTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFYDPASAA 286

Query: 1034 ACKEGMNGYLFNGRACVVAFASPQTLKQMGASYMNKSQVQPQINQQQGRRPMNDGVGRGG 1213
            ACKEGM+GY+FNGRACVVAFASPQTLKQMGASYMNK+Q Q Q  Q QGRRP NDG+GRGG
Sbjct: 287  ACKEGMDGYMFNGRACVVAFASPQTLKQMGASYMNKNQGQSQA-QPQGRRP-NDGLGRGG 344

Query: 1214 GMNYSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVGPKNMV-XXXXXXXXX 1390
             MNY                                       VG KNMV          
Sbjct: 345  NMNYQ---SGDAGRNYGRGGWGRGGQGVVNRSGVGGPMRGRGGVGVKNMVGSSAGVGNGA 401

Query: 1391 XXXXXXXXXXXXXXXXXXXXXMMHPQNMMGAGFDPTYMXXXXXXXXXXXXXXXXMIPSFP 1570
                                 MMHPQ MMGAGFDPTYM                M+PSFP
Sbjct: 402  NGGAAYGQGPAGPPFGGPAGGMMHPQGMMGAGFDPTYMGRGGSYGGFPGPGFPGMLPSFP 461

Query: 1571 AVNTMGLAGVAPHVNPAFFGRXXXXXXXXXXXXXXXDAHHAGMWTDTSMGGWGGDEHGRR 1750
            AVNT+GLAGVAPHVNPAFFGR               D  H GMWTDTSMGGWGGDEHGRR
Sbjct: 462  AVNTLGLAGVAPHVNPAFFGRGMAPNGMGMMGGPGMDGPHVGMWTDTSMGGWGGDEHGRR 521

Query: 1751 TRESSYGGDDGASEYGYGEASHEKGVRSNAAPREKERGSEREWSGNS---XXXXXXXXXX 1921
            TRESSYGG+DGASEYGYG+A+HEKG RS+ A REKER S+REWSGNS             
Sbjct: 522  TRESSYGGEDGASEYGYGDANHEKG-RSSGASREKERVSDREWSGNSDRRHRDEKERDWD 580

Query: 1922 XXXXXXXXXXYREEKDSYRDHRHRERDLVNEDEWDRGQXXXXXXXXXXVMPEEDHRSRSR 2101
                      YREEKDSYR+HRHRERDL  +D+ DRGQ           MPEE  RSRSR
Sbjct: 581  RSEREHREHRYREEKDSYREHRHRERDLDYDDDLDRGQSSSRSRRRSHAMPEEQRRSRSR 640

Query: 2102 DVDYGKRRRLP 2134
            DVDYGKRRRLP
Sbjct: 641  DVDYGKRRRLP 651


>ref|XP_007225677.1| hypothetical protein PRUPE_ppa002814mg [Prunus persica]
            gi|462422613|gb|EMJ26876.1| hypothetical protein
            PRUPE_ppa002814mg [Prunus persica]
          Length = 630

 Score =  623 bits (1606), Expect = e-175
 Identities = 352/668 (52%), Positives = 388/668 (58%), Gaps = 6/668 (0%)
 Frame = +2

Query: 149  MAEEQLDYEDEEXXXXXXXXXXXXXXISXXXXXXXXXXXXXXXXXXXXXXXXEGFLQMHR 328
            MAEEQ+DYEDEE              IS                        EGFLQMHR
Sbjct: 1    MAEEQIDYEDEEYGGAQKLQYQGSGAISALADEEPMVEDDEYDDLYNDVNVREGFLQMHR 60

Query: 329  SEAPVRTG-IGNGGLQAQKTDVLESTLEAGGSQGLSIPGVSAEGKYSNA-AHFPDQRVGP 502
            SEAP+  G +GNGGLQAQKTDV E+ ++AG SQ   IPGVS +GKYS+A A FP+Q+  P
Sbjct: 61   SEAPLPPGGVGNGGLQAQKTDVTETRVQAGVSQESKIPGVSVQGKYSSAVAQFPEQQGQP 120

Query: 503  LAAKGPELGSVNYTDGALVSQKGRVNEMTTDGQVRNLGFQGSTLIPHKSGVDSTNMPGKI 682
              AK PELGS  Y                           GST +P   G DS+++ GK 
Sbjct: 121  PVAKEPELGSTGY---------------------------GSTTMPPNVGGDSSDITGKT 153

Query: 683  VSESAPLLNSDPGGPRGAPQISXXXXXXXXXXXXXXXXXXXXDNQIRVNENQIRPSVENG 862
              ES P +NS   GP G  Q+                      N+   NENQIRP VENG
Sbjct: 154  ALESVPSMNSGTAGPTGVTQMPTNQISIKVNA-----------NRPMFNENQIRPPVENG 202

Query: 863  PTMLFVGELHWWTTDSELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFYDPGAASACK 1042
             TMLFVGELHWWTTD+ELESVLSQYGRVKEIKFFDERASGKSKGYCQVEF+DP AA+ACK
Sbjct: 203  STMLFVGELHWWTTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFHDPAAATACK 262

Query: 1043 EGMNGYLFNGRACVVAFASPQTLKQMGASYMNKSQVQPQINQQQGRRPMNDGVGRGGGMN 1222
            EGM+GYLFNGRACVVAFASPQTLKQMGASY++KSQ Q Q +QQ GRRPMN+GVGRGGG+N
Sbjct: 263  EGMDGYLFNGRACVVAFASPQTLKQMGASYLSKSQGQTQ-SQQPGRRPMNEGVGRGGGVN 321

Query: 1223 YSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVGPKNMVXXXXXXXXXXXXX 1402
            Y                                      A+G KNM              
Sbjct: 322  YQTGDTGGRNFGRGGWGRGGQGVANRGPGGGGPMRGRGGAMGAKNMA-GNPAGVGTGANG 380

Query: 1403 XXXXXXXXXXXXXXXXXMMHPQNMMGAGFDPTYMXXXXXXXXXXXXXXXXMIPSFPAVNT 1582
                             MM+PQ MMGAGFDPTYM                M+ SFPAVNT
Sbjct: 381  GYGQGLAGPGFGGPVGGMMNPQGMMGAGFDPTYMGRGGGYGGFPGPAFPGMLSSFPAVNT 440

Query: 1583 MGLAGVAPHVNPAFFGRXXXXXXXXXXXXXXXDAHHAGMWTDTSMGGWGGDEHGRRTRES 1762
            MGLAGVAPHVNPAFFGR               D HHAGMW D SMGGWGGDEHGRRTRES
Sbjct: 441  MGLAGVAPHVNPAFFGRGMATNGMGMMGSSGMDGHHAGMWNDPSMGGWGGDEHGRRTRES 500

Query: 1763 SYGGDDGASEYGYGEASHEKGVRSNAAPREKERGSEREWSGNS----XXXXXXXXXXXXX 1930
            SYGGDDGASEYGYGEA+HEKG RSNA  RE+ERGSER+WSGNS                 
Sbjct: 501  SYGGDDGASEYGYGEANHEKGGRSNAPSRERERGSERDWSGNSERRHRDEREQDWDRSER 560

Query: 1931 XXXXXXXYREEKDSYRDHRHRERDLVNEDEWDRGQXXXXXXXXXXVMPEEDHRSRSRDVD 2110
                   Y+EEKDSYRDHR RERD+  ED+WDRGQ           MPE+DHRSRSRDVD
Sbjct: 561  GEHREHRYKEEKDSYRDHRQRERDVGYEDDWDRGQSSSRPRSRSKAMPEDDHRSRSRDVD 620

Query: 2111 YGKRRRLP 2134
            YGKRRRLP
Sbjct: 621  YGKRRRLP 628


>ref|XP_007044908.1| RNA-binding family protein isoform 5, partial [Theobroma cacao]
            gi|508708843|gb|EOY00740.1| RNA-binding family protein
            isoform 5, partial [Theobroma cacao]
          Length = 656

 Score =  614 bits (1583), Expect = e-173
 Identities = 341/667 (51%), Positives = 397/667 (59%), Gaps = 5/667 (0%)
 Frame = +2

Query: 140  MDPMAEEQLDYEDEEXXXXXXXXXXXXXXISXXXXXXXXXXXXXXXXXXXXXXXXEGFLQ 319
            MD MAEEQ+D+ DEE              I                         EGFLQ
Sbjct: 1    MDAMAEEQIDFGDEEYGGGQKMQYQGSGAIPALADEEMMGEDDEYDDLYNDVNVGEGFLQ 60

Query: 320  MHRSEAPVRTG-IGNGGLQAQKTDVLESTLEAGGSQGLSIPGVSAEGKYSN-AAHFPDQR 493
            + RSEAP++ G +G+ GL+AQ+ +  E  +EAGGSQGL+IPGVS +GK+ N +A +P++ 
Sbjct: 61   LQRSEAPLQPGGLGSTGLKAQRNEAPEPRVEAGGSQGLNIPGVSVQGKHPNVSARYPEKE 120

Query: 494  VGPLAAKGPELGSVNYTDGALVSQKGRVNEMTTDGQVRNLGFQGSTLIPHKSGVDSTNMP 673
              P A   PE+ S +Y  G+ +SQKG V E T D QV+NLGFQG T   +K G+D + +P
Sbjct: 121  EQP-AVNRPEMVSGSYPSGSSISQKGSVTEGTHDKQVKNLGFQGLTSASNKVGIDPSGVP 179

Query: 674  GKIVSESAPLLNSDPGGPRGAPQISXXXXXXXXXXXXXXXXXXXXDNQIRVNENQIRPSV 853
             KI ++ A  LNS  GGP+G P +                      N   +NENQ++P +
Sbjct: 180  QKIANDPAQSLNSGTGGPQGPPHVPPNQMGTNV-------------NHPVMNENQVQPPI 226

Query: 854  ENGPTMLFVGELHWWTTDSELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFYDPGAAS 1033
            ENGPTMLFVGELHWWTTD+ELESVLSQYGR+KEIKFFDE+ASGKSKGYCQVEFYDP +A+
Sbjct: 227  ENGPTMLFVGELHWWTTDAELESVLSQYGRLKEIKFFDEKASGKSKGYCQVEFYDPSSAA 286

Query: 1034 ACKEGMNGYLFNGRACVVAFASPQTLKQMGASYMNKSQVQPQINQQQGRRPMNDGVGRGG 1213
             CKEGMNGY+FNGRACVVAFASPQTLKQMGASYMNK+Q Q Q  Q QGRRP N+G+GRGG
Sbjct: 287  VCKEGMNGYMFNGRACVVAFASPQTLKQMGASYMNKNQGQSQA-QPQGRRP-NEGLGRGG 344

Query: 1214 GMNYSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVGPKNMVXXXXXXXXXX 1393
             +NY                                       VG KNMV          
Sbjct: 345  NLNYQ---SGDAGRNYGRGGWGRGGQGGVNRAGGGGLMRGRGGVGVKNMVGISAGVGNGA 401

Query: 1394 XXXXXXXXXXXXXXXXXXXXMMHPQNMMGAGFDPTYMXXXXXXXXXXXXXXXXMIPSFPA 1573
                                MMHPQ MMGAGFDPTYM                M+PSFPA
Sbjct: 402  NGAGAYGQGPGPAFGGPAGGMMHPQGMMGAGFDPTYMVRGGGYGGFPGPGFPGMLPSFPA 461

Query: 1574 VNTMGLAGVAPHVNPAFFGRXXXXXXXXXXXXXXXDAHHAGMWTDTSMGGWGGDEHGRRT 1753
            VNTMGLAGVAPHVNPAFFGR               D  HAGMWTD SMGGWGGDEHGRRT
Sbjct: 462  VNTMGLAGVAPHVNPAFFGRGMAPNGMGMMGASGMDGPHAGMWTDASMGGWGGDEHGRRT 521

Query: 1754 RESSYGGDDGASEYGYGEASHEKGVRSNAAPREKERGSEREWSGNS---XXXXXXXXXXX 1924
            RESSYGG+DGASEYGYG+A+HEKG RS+ A REKER SEREWSGNS              
Sbjct: 522  RESSYGGEDGASEYGYGDANHEKG-RSSGASREKERVSEREWSGNSDRRHRDEKEQDWDR 580

Query: 1925 XXXXXXXXXYREEKDSYRDHRHRERDLVNEDEWDRGQXXXXXXXXXXVMPEEDHRSRSRD 2104
                     YREEKDSYR+HRHRERDL  +D+WDRGQ           MPEE+HRSRSRD
Sbjct: 581  SEREHREHRYREEKDSYREHRHRERDLDYDDDWDRGQSSSRSRRRSHAMPEEEHRSRSRD 640

Query: 2105 VDYGKRR 2125
            V Y + +
Sbjct: 641  VGYREEK 647


>ref|XP_002515040.1| RNA binding protein, putative [Ricinus communis]
            gi|223546091|gb|EEF47594.1| RNA binding protein, putative
            [Ricinus communis]
          Length = 644

 Score =  607 bits (1566), Expect = e-171
 Identities = 344/666 (51%), Positives = 392/666 (58%), Gaps = 4/666 (0%)
 Frame = +2

Query: 149  MAEEQLDYEDEEXXXXXXXXXXXXXXISXXXXXXXXXXXXXXXXXXXXXXXXEGFLQMHR 328
            MA+EQ+DYEDEE              I                         E FLQMHR
Sbjct: 1    MADEQIDYEDEEYGGAQKLQYQGSGAIPALAEEEMGEDDEYDDLYNDVNIG-ENFLQMHR 59

Query: 329  SEAP-VRTGIGNGGLQAQKTDVLESTLEAGGSQGLSIPGVSAEGKYSNAAHFPDQRVGPL 505
            SEAP     +GNGG Q + ++ L   +E+GGSQGL+IPGV+ E KYS   HFP+Q V   
Sbjct: 60   SEAPPAPPSVGNGGFQPRNSNDLR--VESGGSQGLNIPGVAVESKYSTGTHFPEQNV--- 114

Query: 506  AAKGPELGSVNYTDGALVSQKGRVNEMTTDGQVRNLGFQGSTLIPHKSGVDSTNMPGKIV 685
              KGPE+GSV Y DG+ ++QK RV EMT D Q RN+GFQGST  P   GVD ++M  KI 
Sbjct: 115  --KGPEIGSVGYPDGSSIAQKTRVMEMTNDSQARNMGFQGSTSGPSNIGVDPSDMNNKIS 172

Query: 686  SESAPLLNSDPGGPRGAPQISXXXXXXXXXXXXXXXXXXXXDNQIRVNENQIRPSVENGP 865
            ++  P+ N+  G PR  PQ+                      N+   NENQIRP +ENG 
Sbjct: 173  NDPTPVPNA--GVPRVIPQLPASQMNMNMDT-----------NRSATNENQIRPPLENGS 219

Query: 866  TMLFVGELHWWTTDSELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFYDPGAASACKE 1045
            TML+VGELHWWTTD+ELE+VLSQYG VKEIKFFDERASGKSKGYCQVEFYD  AA+ACKE
Sbjct: 220  TMLYVGELHWWTTDAELENVLSQYGMVKEIKFFDERASGKSKGYCQVEFYDAAAAAACKE 279

Query: 1046 GMNGYLFNGRACVVAFASPQTLKQMGASYMNKSQVQPQINQQQGRRPMNDGVGRGGGMNY 1225
            GMNG+LFNGRACVVAFAS QTLKQMGASYMNK+Q QPQ +Q QGRRPMNDG GRGG MNY
Sbjct: 280  GMNGHLFNGRACVVAFASQQTLKQMGASYMNKNQGQPQ-SQNQGRRPMNDGAGRGGNMNY 338

Query: 1226 SXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVGPKNMVXXXXXXXXXXXXXX 1405
                                                  ++G KN+V              
Sbjct: 339  Q-GGDAGRNFGRGGWGRGGQGILNRGPGGGGRMGGRGGSMGAKNIVGGAGGVGSGANGGG 397

Query: 1406 XXXXXXXXXXXXXXXXMMHPQNMMGAGFDPTYMXXXXXXXXXXXXXXXXMIPSFPAVNTM 1585
                            M+ PQ+MM AGFDPTYM                M+PSFPAVN M
Sbjct: 398  YGQGLAGPAFGGPAGAMLPPQSMMRAGFDPTYMGRGAGYGGFAGPGFPGMLPSFPAVNAM 457

Query: 1586 GLAGVAPHVNPAFFGRXXXXXXXXXXXXXXXDAHHAGMWTDTSMGGWGGDEHGRRTRESS 1765
            GLAGVAPHVNPAFFGR               D  +AGMW+DTSMGGW G+E GRRTRESS
Sbjct: 458  GLAGVAPHVNPAFFGRGMAPNGMGMMGPSGMDGPNAGMWSDTSMGGW-GEEPGRRTRESS 516

Query: 1766 YGGDDGASEYGYGEASHEKGVRSNAAPREKERGSEREWSGNS---XXXXXXXXXXXXXXX 1936
            YGGDDGASEYGYGE +HEKG RS+AA REKER SER+WSGNS                  
Sbjct: 517  YGGDDGASEYGYGEVNHEKGARSSAASREKERASERDWSGNSDRRHRDDREHDWDRSERE 576

Query: 1937 XXXXXYREEKDSYRDHRHRERDLVNEDEWDRGQXXXXXXXXXXVMPEEDHRSRSRDVDYG 2116
                 YREEK+SYRDHR RERD   ED+WDRGQ           +PEED+RSRSRD DYG
Sbjct: 577  HKEHRYREEKESYRDHRQRERDSGYEDDWDRGQSSSRSRSRSRAVPEEDYRSRSRDADYG 636

Query: 2117 KRRRLP 2134
            KRRRLP
Sbjct: 637  KRRRLP 642


>ref|XP_007044907.1| RNA-binding family protein isoform 4 [Theobroma cacao]
            gi|508708842|gb|EOY00739.1| RNA-binding family protein
            isoform 4 [Theobroma cacao]
          Length = 697

 Score =  600 bits (1547), Expect = e-168
 Identities = 347/715 (48%), Positives = 400/715 (55%), Gaps = 50/715 (6%)
 Frame = +2

Query: 140  MDPMAEEQLDYEDEEXXXXXXXXXXXXXXISXXXXXXXXXXXXXXXXXXXXXXXXEGFLQ 319
            MD MAEEQ+D+ DEE              I                         EGFLQ
Sbjct: 1    MDAMAEEQIDFGDEEYGGGQKMQYQGSGAIPALADEEMMGEDDEYDDLYNDVNVGEGFLQ 60

Query: 320  MHRSEAPVRTG-IGNGGLQAQKTDVLESTLEAGGSQGLSIPGVSAEGKYSN-AAHFPDQR 493
            + RSEAP++ G +G+ GL+AQ+ +  E  +EAGGSQGL+IPGVS +GK+ N +A +P++ 
Sbjct: 61   LQRSEAPLQPGGLGSTGLKAQRNEAPEPRVEAGGSQGLNIPGVSVQGKHPNVSARYPEKE 120

Query: 494  VGPLAAKGPELGSVNYTDGALVSQKGRVNEMTTDGQVRNLGFQGSTLIPHKSGVDSTNMP 673
              P A   PE+ S +Y  G+ +SQKG V E T D QV+NLGFQG T   +K G+D + +P
Sbjct: 121  EQP-AVNRPEMVSGSYPSGSSISQKGSVTEGTHDKQVKNLGFQGLTSASNKVGIDPSGVP 179

Query: 674  GKIVSESAPLLNSDPGGPRGAPQISXXXXXXXXXXXXXXXXXXXXDNQIRVNENQIRPSV 853
             KI ++ A  LNS  GGP+G P +                      N   +NENQ++P +
Sbjct: 180  QKIANDPAQSLNSGTGGPQGPPHVPPNQMGTNV-------------NHPVMNENQVQPPI 226

Query: 854  ENGPTMLFVGELHWWTTDSELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFYDPGAAS 1033
            ENGPTMLFVGELHWWTTD+ELESVLSQYGR+KEIKFFDE+ASGKSKGYCQVEFYDP +A+
Sbjct: 227  ENGPTMLFVGELHWWTTDAELESVLSQYGRLKEIKFFDEKASGKSKGYCQVEFYDPSSAA 286

Query: 1034 ACKEGMNGYLFNGRACVVAFASPQTLKQMGASYMNKSQVQPQINQQQGRRPMNDGVGRGG 1213
             CKEGMNGY+FNGRACVVAFASPQTLKQMGASYMNK+Q Q Q  Q QGRRP N+G+GRGG
Sbjct: 287  VCKEGMNGYMFNGRACVVAFASPQTLKQMGASYMNKNQGQSQA-QPQGRRP-NEGLGRGG 344

Query: 1214 GMNYSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVGPKNMVXXXXXXXXXX 1393
             +NY                                       VG KNMV          
Sbjct: 345  NLNYQ---SGDAGRNYGRGGWGRGGQGGVNRAGGGGLMRGRGGVGVKNMVGISAGVGNGA 401

Query: 1394 XXXXXXXXXXXXXXXXXXXXMMHPQNMMGAGFDPTYMXXXXXXXXXXXXXXXXMIPSFPA 1573
                                MMHPQ MMGAGFDPTYM                M+PSFPA
Sbjct: 402  NGAGAYGQGPGPAFGGPAGGMMHPQGMMGAGFDPTYMVRGGGYGGFPGPGFPGMLPSFPA 461

Query: 1574 VNTMGLAGVAPHVNPAFFGRXXXXXXXXXXXXXXXDAHHAGMWTDTSMGGWGGDEHGRRT 1753
            VNTMGLAGVAPHVNPAFFGR               D  HAGMWTD SMGGWGGDEHGRRT
Sbjct: 462  VNTMGLAGVAPHVNPAFFGRGMAPNGMGMMGASGMDGPHAGMWTDASMGGWGGDEHGRRT 521

Query: 1754 RESSYGGDDGASEYGYGEASHEKGVRSNAAPREKERGSEREWSGNS---XXXXXXXXXXX 1924
            RESSYGG+DGASEYGYG+A+HEKG RS+ A REKER SEREWSGNS              
Sbjct: 522  RESSYGGEDGASEYGYGDANHEKG-RSSGASREKERVSEREWSGNSDRRHRDEKEQDWDR 580

Query: 1925 XXXXXXXXXYREEK---------------------------------------------D 1969
                     YREEK                                             D
Sbjct: 581  SEREHREHRYREEKDSYREHRHREREWSGNSDRRHRDEKERDWDRSEREHREHRYREEKD 640

Query: 1970 SYRDHRHRERDLVNEDEWDRGQXXXXXXXXXXVMPEEDHRSRSRDVDYGKRRRLP 2134
            SYR+HRHRERDL  +D+ DRGQ           MPEE  RSRSRDVDYGKRRRLP
Sbjct: 641  SYREHRHRERDLDYDDDLDRGQSSSRSRRRSHAMPEEQRRSRSRDVDYGKRRRLP 695


>ref|XP_004310003.1| PREDICTED: uncharacterized protein LOC101309507 [Fragaria vesca
            subsp. vesca]
          Length = 646

 Score =  570 bits (1470), Expect = e-160
 Identities = 326/670 (48%), Positives = 371/670 (55%), Gaps = 5/670 (0%)
 Frame = +2

Query: 140  MDPMAEEQLDYEDEEXXXXXXXXXXXXXXISXXXXXXXXXXXXXXXXXXXXXXXXEGFLQ 319
            MDPM EEQ+DYE+EE              I                         EGFLQ
Sbjct: 1    MDPMGEEQIDYEEEEYGGAQKLQYQESGAIPALADEEPMVEDDEYDDLYNDVNVGEGFLQ 60

Query: 320  MHRSEAPVR-TGIGNGGLQAQKTDVLESTLEAGGSQGLSIPGVSAEGKYSNAAHFPDQRV 496
            MHR E P+   G+GNGGLQAQK +V E  ++ G SQ +  PG S EGKYS+    P+Q+ 
Sbjct: 61   MHRPEPPLPPAGVGNGGLQAQKNNVPEQRVQGGASQEVKNPGFSVEGKYSSV---PEQKD 117

Query: 497  GPLAAKGPELGSVNYTDGALVSQKGRVNEMTTDGQVRNLGFQGSTLIPHKSGVDSTNMPG 676
             P  +  PE+ S          QKGRV EMT D QVRN+GFQG+  +      DS+++ G
Sbjct: 118  QPPVSVVPEMAS----------QKGRVMEMTHDAQVRNMGFQGAATMQSNVVADSSDLTG 167

Query: 677  KIVSESAPLLNSDPGGPRGAPQISXXXXXXXXXXXXXXXXXXXXDNQIRVNENQIRPSVE 856
            KI +   P +NS   GP    Q+                      N+  VNENQIRP VE
Sbjct: 168  KIANGPIPSMNSGSNGPPAVQQMPANQMNMKINV-----------NRPMVNENQIRPPVE 216

Query: 857  NGPTMLFVGELHWWTTDSELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFYDPGAASA 1036
            NG   LFVGELHWWTTD+ELE VLSQ+GR+KEIKFFDERASGKSKGYCQV+FYDP AASA
Sbjct: 217  NGSATLFVGELHWWTTDAELEGVLSQFGRIKEIKFFDERASGKSKGYCQVDFYDPAAASA 276

Query: 1037 CKEGMNGYLFNGRACVVAFASPQTLKQMGASYMNKSQVQPQINQQQGRRPMNDGVGRGGG 1216
            CKEGM+GY+FNGRACVVAFAS QTLKQMG SY+NKSQ Q Q  Q QGRRPMNDG GRGG 
Sbjct: 277  CKEGMDGYVFNGRACVVAFASSQTLKQMGDSYVNKSQGQVQ-TQPQGRRPMNDGAGRGGN 335

Query: 1217 MNYSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVGPKNMVXXXXXXXXXXX 1396
            MN+                                      A+G +NMV           
Sbjct: 336  MNFQ-GGDTGRNFGRGNNWGRGGQGVLNRGPGGGGPGRGRGAMGARNMVGNNAGVGTGAN 394

Query: 1397 XXXXXXXXXXXXXXXXXXXMMHPQNMMGAGFDPTYMXXXXXXXXXXXXXXXXMIPSFPAV 1576
                               MM+   MMG GFDPTYM                M+P FP V
Sbjct: 395  GGGYGQGLGGPGFGGPVGGMMNAPGMMGPGFDPTYMGRGGGYGGFPGPGFPGMLPQFPGV 454

Query: 1577 NTMGLAGVAPHVNPAFFGRXXXXXXXXXXXXXXXDAHHAGMWTDTSMGGWGGDEHGRRTR 1756
            N MGLAGVAPHVNPAFFGR               + HHA MW D SM GW G+E  RRTR
Sbjct: 455  NAMGLAGVAPHVNPAFFGRGMATNGMGMMGSSGMEGHHAPMWNDPSMAGWTGEEQDRRTR 514

Query: 1757 ESSYGGDDGASEYG-YGEASHEKGVRSNAAPREKERGSEREWSGNS---XXXXXXXXXXX 1924
            ESSYGGDDG SEYG YGEA+HEK VRS+AAPRE+ER SEREW+G S              
Sbjct: 515  ESSYGGDDGGSEYGNYGEANHEKPVRSSAAPRERERESEREWTGTSERRHRDEREQDWDR 574

Query: 1925 XXXXXXXXXYREEKDSYRDHRHRERDLVNEDEWDRGQXXXXXXXXXXVMPEEDHRSRSRD 2104
                     Y+EEKDSYRDHR RERD+  ED+ DRG            MPE+DHRSRSRD
Sbjct: 575  SEREHREPRYKEEKDSYRDHRRRERDVAYEDDRDRGHSSSRPRSRSKAMPEDDHRSRSRD 634

Query: 2105 VDYGKRRRLP 2134
            VDYGKRRRLP
Sbjct: 635  VDYGKRRRLP 644


>ref|XP_007044909.1| RNA-binding family protein isoform 6 [Theobroma cacao]
            gi|508708844|gb|EOY00741.1| RNA-binding family protein
            isoform 6 [Theobroma cacao]
          Length = 602

 Score =  563 bits (1450), Expect = e-157
 Identities = 316/621 (50%), Positives = 367/621 (59%), Gaps = 5/621 (0%)
 Frame = +2

Query: 140  MDPMAEEQLDYEDEEXXXXXXXXXXXXXXISXXXXXXXXXXXXXXXXXXXXXXXXEGFLQ 319
            MD MAEEQ+D+ DEE              I                         EGFLQ
Sbjct: 1    MDAMAEEQIDFGDEEYGGGQKMQYQGSGAIPALADEEMMGEDDEYDDLYNDVNVGEGFLQ 60

Query: 320  MHRSEAPVRTG-IGNGGLQAQKTDVLESTLEAGGSQGLSIPGVSAEGKYSN-AAHFPDQR 493
            + RSEAP++ G +G+ GL+AQ+ +  E  +EAGGSQGL+IPGVS +GK+ N +A +P++ 
Sbjct: 61   LQRSEAPLQPGGLGSTGLKAQRNEAPEPRVEAGGSQGLNIPGVSVQGKHPNVSARYPEKE 120

Query: 494  VGPLAAKGPELGSVNYTDGALVSQKGRVNEMTTDGQVRNLGFQGSTLIPHKSGVDSTNMP 673
              P A   PE+ S +Y  G+ +SQKG V E T D QV+NLGFQG T   +K G+D + +P
Sbjct: 121  EQP-AVNRPEMVSGSYPSGSSISQKGSVTEGTHDKQVKNLGFQGLTSASNKVGIDPSGVP 179

Query: 674  GKIVSESAPLLNSDPGGPRGAPQISXXXXXXXXXXXXXXXXXXXXDNQIRVNENQIRPSV 853
             KI ++ A  LNS  GGP+G P +                      N   +NENQ++P +
Sbjct: 180  QKIANDPAQSLNSGTGGPQGPPHVPPNQMGTNV-------------NHPVMNENQVQPPI 226

Query: 854  ENGPTMLFVGELHWWTTDSELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFYDPGAAS 1033
            ENGPTMLFVGELHWWTTD+ELESVLSQYGR+KEIKFFDE+ASGKSKGYCQVEFYDP +A+
Sbjct: 227  ENGPTMLFVGELHWWTTDAELESVLSQYGRLKEIKFFDEKASGKSKGYCQVEFYDPSSAA 286

Query: 1034 ACKEGMNGYLFNGRACVVAFASPQTLKQMGASYMNKSQVQPQINQQQGRRPMNDGVGRGG 1213
             CKEGMNGY+FNGRACVVAFASPQTLKQMGASYMNK+Q Q Q  Q QGRRP N+G+GRGG
Sbjct: 287  VCKEGMNGYMFNGRACVVAFASPQTLKQMGASYMNKNQGQSQA-QPQGRRP-NEGLGRGG 344

Query: 1214 GMNYSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVGPKNMVXXXXXXXXXX 1393
             +NY                                       VG KNMV          
Sbjct: 345  NLNYQ---SGDAGRNYGRGGWGRGGQGGVNRAGGGGLMRGRGGVGVKNMVGISAGVGNGA 401

Query: 1394 XXXXXXXXXXXXXXXXXXXXMMHPQNMMGAGFDPTYMXXXXXXXXXXXXXXXXMIPSFPA 1573
                                MMHPQ MMGAGFDPTYM                M+PSFPA
Sbjct: 402  NGAGAYGQGPGPAFGGPAGGMMHPQGMMGAGFDPTYMVRGGGYGGFPGPGFPGMLPSFPA 461

Query: 1574 VNTMGLAGVAPHVNPAFFGRXXXXXXXXXXXXXXXDAHHAGMWTDTSMGGWGGDEHGRRT 1753
            VNTMGLAGVAPHVNPAFFGR               D  HAGMWTD SMGGWGGDEHGRRT
Sbjct: 462  VNTMGLAGVAPHVNPAFFGRGMAPNGMGMMGASGMDGPHAGMWTDASMGGWGGDEHGRRT 521

Query: 1754 RESSYGGDDGASEYGYGEASHEKGVRSNAAPREKERGSEREWSGNS---XXXXXXXXXXX 1924
            RESSYGG+DGASEYGYG+A+HEKG RS+ A REKER SEREWSGNS              
Sbjct: 522  RESSYGGEDGASEYGYGDANHEKG-RSSGASREKERVSEREWSGNSDRRHRDEKEQDWDR 580

Query: 1925 XXXXXXXXXYREEKDSYRDHR 1987
                     YREEKDSYR+HR
Sbjct: 581  SEREHREHRYREEKDSYREHR 601


>gb|EXB82464.1| Cleavage and polyadenylation specificity factor subunit [Morus
            notabilis]
          Length = 636

 Score =  551 bits (1419), Expect = e-154
 Identities = 328/670 (48%), Positives = 375/670 (55%), Gaps = 8/670 (1%)
 Frame = +2

Query: 149  MAEEQLDYEDEEXXXXXXXXXXXXXX-ISXXXXXXXXXXXXXXXXXXXXXXXXEGFLQMH 325
            MAE+ +D+EDEE               IS                        EGFLQ+ 
Sbjct: 1    MAEDHIDFEDEEYGGAQKHQYQGSGGAISALADEELMGDDDEYDDLYNDVNVGEGFLQLQ 60

Query: 326  RSEAP---VRTGIGNGGLQAQKTDVLESTLEAGGSQGLSIPGVSAEGKYSNA-AHFPDQR 493
            RSEAP      G+GNG LQAQK +  E   E GGSQ  +IPGVSAEG++S+A + FP Q+
Sbjct: 61   RSEAPSLPAAAGVGNG-LQAQKRNFPEPREEIGGSQQPNIPGVSAEGRFSSAGSQFPGQQ 119

Query: 494  VGPLAAKGPELGSVNYTDGALVSQKGRVNEMTTDGQVRNLGFQGSTLIPHKSGVDSTNMP 673
             G    K  E GS+ Y DGA  SQKGR+            GFQGS  + H  GVDS+++P
Sbjct: 120  DGLKVDKKSEAGSMVYPDGASGSQKGRIVA----------GFQGSKPMLHSVGVDSSDIP 169

Query: 674  GKIVSESAPLLNSDPGGPRGAPQISXXXXXXXXXXXXXXXXXXXXDNQIRVNENQIRPSV 853
            GK+V+E     NS   GPRG   +                          VNENQIRPS+
Sbjct: 170  GKMVNEPIQAPNSGGAGPRGILPMQGNQTTVNANVSHPI-----------VNENQIRPSI 218

Query: 854  ENGPTMLFVGELHWWTTDSELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFYDPGAAS 1033
            ENG TMLFVGELHWWTTD+ELESVLSQYGRVKEIKFFDERASGKSKGYCQVE+YD  AA 
Sbjct: 219  ENGSTMLFVGELHWWTTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEYYDAAAAV 278

Query: 1034 ACKEGMNGYLFNGRACVVAFASPQTLKQMGASYMNKSQVQPQINQQQGRRPMNDGVGRGG 1213
            ACKEGM+G++FNGRACVVAFASPQTLKQMGA+YM+K+QVQ Q +Q QGRRP+NDGVGRGG
Sbjct: 279  ACKEGMHGHVFNGRACVVAFASPQTLKQMGAAYMSKNQVQNQ-SQPQGRRPINDGVGRGG 337

Query: 1214 GMNYSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVGPKNMVXXXXXXXXXX 1393
              N+                                      A+G KNMV          
Sbjct: 338  NPNFQ-SGDGGRNFGRGGWGRGGQGAPNRGPGSGGPMRGRGGAMGAKNMV----GNNAGV 392

Query: 1394 XXXXXXXXXXXXXXXXXXXXMMHPQNMMGAGFDPTYMXXXXXXXXXXXXXXXXMIPSFPA 1573
                                MM+PQ MMG GFDPTYM                M+PSFPA
Sbjct: 393  GGGGYGQGLAGPPFGGPAGGMMNPQGMMGTGFDPTYMGRGVGYGGFAGPAFPGMLPSFPA 452

Query: 1574 VNTMGLAGVAPHVNPAFFGRXXXXXXXXXXXXXXXDAHHAGMWTDTSMGGWGGDEHGRRT 1753
            VNTMG A VAPHVNPAFFGR               D H  GMW D S+GGWGG+EHGRRT
Sbjct: 453  VNTMGFAAVAPHVNPAFFGRGMTNNGMGMVGSSLMDGHQGGMWNDPSIGGWGGEEHGRRT 512

Query: 1754 RESSYGGDDGASEYGYGEASHEKGVRSNAAPREKERGSEREWSGNS---XXXXXXXXXXX 1924
            RESSYGGDDGASEYGYG+ +HEKG R        ERGSER+WSGNS              
Sbjct: 513  RESSYGGDDGASEYGYGDTNHEKGGR--------ERGSERDWSGNSERRNHEERDQDWDR 564

Query: 1925 XXXXXXXXXYREEKDSYRDHRHRERDLVNEDEWDRGQXXXXXXXXXXVMPEEDHRSRSRD 2104
                     YRE KD  RD+R +ER+L  ED+WDRGQ          V+ E+ HRSRSRD
Sbjct: 565  SQKEQKEHRYREGKDGSRDYRPKERELDYEDDWDRGQSSSRLRSRSRVVQEDHHRSRSRD 624

Query: 2105 VDYGKRRRLP 2134
            VDYGKRRRLP
Sbjct: 625  VDYGKRRRLP 634


>ref|XP_006341786.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            CG7185-like isoform X1 [Solanum tuberosum]
            gi|565349616|ref|XP_006341787.1| PREDICTED: cleavage and
            polyadenylation specificity factor subunit CG7185-like
            isoform X2 [Solanum tuberosum]
          Length = 648

 Score =  532 bits (1371), Expect = e-148
 Identities = 308/667 (46%), Positives = 362/667 (54%), Gaps = 2/667 (0%)
 Frame = +2

Query: 140  MDPMAEEQLDYEDEEXXXXXXXXXXXXXXISXXXXXXXXXXXXXXXXXXXXXXXXEGFLQ 319
            MDP A+EQLDY DEE              I                         EGFLQ
Sbjct: 1    MDPTADEQLDYGDEEYGGSHKMQYHGSGTIPALAEDEMMGEDDEYDDLYNDVNIGEGFLQ 60

Query: 320  MHRSEAPVRT-GIGNGGLQAQKTDVLESTLEAGGSQGLSIPGVSAEGKYSNA-AHFPDQR 493
            + RSE PV +   GNG  QAQK     S     GS+   IPG++ EGKY+     FP Q+
Sbjct: 61   LQRSEVPVPSVDAGNGNFQAQKDSFPASRAGGLGSEEAKIPGIATEGKYAGTEVQFPQQK 120

Query: 494  VGPLAAKGPELGSVNYTDGALVSQKGRVNEMTTDGQVRNLGFQGSTLIPHKSGVDSTNMP 673
              P+  +  E  +    D A  ++   +  MT + Q  N G+QGS  +P K G D   MP
Sbjct: 121  GEPVVERETERPA----DAAQKARPSAIT-MTLNSQAGNSGYQGSMPMPQKIGADPMAMP 175

Query: 674  GKIVSESAPLLNSDPGGPRGAPQISXXXXXXXXXXXXXXXXXXXXDNQIRVNENQIRPSV 853
             K  SE+ PL+NS   GPR  P +                      N   ++E   RPS+
Sbjct: 176  EKNASEATPLMNSVVPGPRVVPHMPTNQLNSSGNVNM---------NNPVISETPFRPSL 226

Query: 854  ENGPTMLFVGELHWWTTDSELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFYDPGAAS 1033
            ENG TMLFVGELHWWTTD+ELESVL+QYG VKEIKFFDERASGKSKGYCQVEF+DP +A+
Sbjct: 227  ENGNTMLFVGELHWWTTDAELESVLTQYGNVKEIKFFDERASGKSKGYCQVEFFDPASAA 286

Query: 1034 ACKEGMNGYLFNGRACVVAFASPQTLKQMGASYMNKSQVQPQINQQQGRRPMNDGVGRGG 1213
            ACKEGMNGY FNGRACVVAFA+PQT+KQMG+SY NK+Q Q Q +Q QGRRPMN+GVGR G
Sbjct: 287  ACKEGMNGYNFNGRACVVAFATPQTIKQMGSSYANKTQNQVQ-SQPQGRRPMNEGVGR-G 344

Query: 1214 GMNYSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVGPKNMVXXXXXXXXXX 1393
            G NY+                                     A+G KNM+          
Sbjct: 345  GPNYT---PGDAGRNFGRGSWGRGGPGMPNRGPGGGPVRGRGAMGSKNMM--VNPGAGNG 399

Query: 1394 XXXXXXXXXXXXXXXXXXXXMMHPQNMMGAGFDPTYMXXXXXXXXXXXXXXXXMIPSFPA 1573
                                +MHPQ MMG GFDP++M                M+P F A
Sbjct: 400  AGGAFGQGLAGPAFGGPPAGLMHPQGMMGPGFDPSFMGRGAGYGGFSGPAFPGMMPPFQA 459

Query: 1574 VNTMGLAGVAPHVNPAFFGRXXXXXXXXXXXXXXXDAHHAGMWTDTSMGGWGGDEHGRRT 1753
            VN MGL GVAPHVNPAFFGR               D  H GMWTDTS GGWGG+EHGRRT
Sbjct: 460  VNPMGLPGVAPHVNPAFFGRGMAANGMGMMSAAGMDGPHPGMWTDTSGGGWGGEEHGRRT 519

Query: 1754 RESSYGGDDGASEYGYGEASHEKGVRSNAAPREKERGSEREWSGNSXXXXXXXXXXXXXX 1933
            RESSYGG+D ASEYGYGE SH+KG RS+A  REKERGSER+WSGNS              
Sbjct: 520  RESSYGGEDNASEYGYGEVSHDKGARSSAVSREKERGSERDWSGNSDKRHRDEREHDRDR 579

Query: 1934 XXXXXXYREEKDSYRDHRHRERDLVNEDEWDRGQXXXXXXXXXXVMPEEDHRSRSRDVDY 2113
                  YREE+D YRD+R +ER+   E+++DRGQ             EEDHRSRSRD +Y
Sbjct: 580  HDKEHRYREERDGYRDYRQKERESEYEEDYDRGQSSSRSRSKSRAAQEEDHRSRSRDTNY 639

Query: 2114 GKRRRLP 2134
            GKRRR P
Sbjct: 640  GKRRRAP 646


>ref|XP_002312652.1| RNA recognition motif-containing family protein [Populus trichocarpa]
            gi|222852472|gb|EEE90019.1| RNA recognition
            motif-containing family protein [Populus trichocarpa]
          Length = 619

 Score =  521 bits (1343), Expect = e-145
 Identities = 303/614 (49%), Positives = 348/614 (56%), Gaps = 4/614 (0%)
 Frame = +2

Query: 305  EGFLQMHRSEAPVRTG-IGNGGLQAQKTDVLESTLEAGGSQGLSIPG--VSAEGKYSNA- 472
            E FLQMH SEAP     +GNGG Q +     ES +E GGSQ L+I G   + EG YSNA 
Sbjct: 42   ENFLQMHGSEAPAPPATVGNGGFQTRNAH--ESRIETGGSQALAITGGGPAVEGIYSNAK 99

Query: 473  AHFPDQRVGPLAAKGPELGSVNYTDGALVSQKGRVNEMTTDGQVRNLGFQGSTLIPHKSG 652
            AHFP+Q+   +A +  ++G V   DG+ V+QKGRV EM+ D QVRN+GFQ ST +P   G
Sbjct: 100  AHFPEQKQVAVAVEAQDVGPV---DGSSVAQKGRVIEMSHDVQVRNMGFQKSTPVPPGIG 156

Query: 653  VDSTNMPGKIVSESAPLLNSDPGGPRGAPQISXXXXXXXXXXXXXXXXXXXXDNQIRVNE 832
            VD ++M  K   E  PL  +   GPRGAPQ+                      N+  VNE
Sbjct: 157  VDPSDMSRKNAIEPEPLPITGSAGPRGAPQMQVNQMHMSADV-----------NRPVVNE 205

Query: 833  NQIRPSVENGPTMLFVGELHWWTTDSELESVLSQYGRVKEIKFFDERASGKSKGYCQVEF 1012
            NQ+RP +ENG T L+VGELHWWTTD+ELES  SQ+GRVKEIKFFDERASGKSKGYCQV+F
Sbjct: 206  NQVRPPIENGSTTLYVGELHWWTTDAELESFASQFGRVKEIKFFDERASGKSKGYCQVDF 265

Query: 1013 YDPGAASACKEGMNGYLFNGRACVVAFASPQTLKQMGASYMNKSQVQPQINQQQGRRPMN 1192
            Y+  AA+ACKEGMNG++FNGR CVVAFASPQTLKQMGASYMNK+Q QPQ  Q QGR  MN
Sbjct: 266  YEAAAAAACKEGMNGHVFNGRPCVVAFASPQTLKQMGASYMNKTQGQPQ-TQSQGRGSMN 324

Query: 1193 DGVGRGGGMNYSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVGPKNMVXXX 1372
            DG GRGG  N+                                      A+GPKNM    
Sbjct: 325  DGAGRGGNANFQ---SGDGGRNYGRGAWGRGGQGILNRGPGGGPMRGRGAMGPKNMAGNV 381

Query: 1373 XXXXXXXXXXXXXXXXXXXXXXXXXXXMMHPQNMMGAGFDPTYMXXXXXXXXXXXXXXXX 1552
                                       MM PQ MMGAGFDP YM                
Sbjct: 382  AGVGSGANGGGYGQGLAGPAFGGPAGGMMPPQGMMGAGFDPLYMGRGGGYGGFAGPGFPG 441

Query: 1553 MIPSFPAVNTMGLAGVAPHVNPAFFGRXXXXXXXXXXXXXXXDAHHAGMWTDTSMGGWGG 1732
            M+PSFPAVN+MGLAGVAPHVNPAFF R               D  + GMW          
Sbjct: 442  MLPSFPAVNSMGLAGVAPHVNPAFFARGMAPNGMGMMVSSGMDGPNPGMW---------- 491

Query: 1733 DEHGRRTRESSYGGDDGASEYGYGEASHEKGVRSNAAPREKERGSEREWSGNSXXXXXXX 1912
                    ESSY GD+GASEYGYGE +HEKG RS+ A REKERGSER+WSGNS       
Sbjct: 492  --------ESSYDGDEGASEYGYGEGNHEKGARSSGASREKERGSERDWSGNSDRRHRDE 543

Query: 1913 XXXXXXXXXXXXXYREEKDSYRDHRHRERDLVNEDEWDRGQXXXXXXXXXXVMPEEDHRS 2092
                         Y+EEKDSYR HR RERD   ED+ DRG             PEED+RS
Sbjct: 544  REQDWDRPEREHRYKEEKDSYRGHRQRERDSGYEDDRDRGHSSSRARSRSRAAPEEDYRS 603

Query: 2093 RSRDVDYGKRRRLP 2134
            R+RDVDYGKRRRLP
Sbjct: 604  RTRDVDYGKRRRLP 617


>ref|XP_006378268.1| hypothetical protein POPTR_0010s06150g [Populus trichocarpa]
            gi|550329195|gb|ERP56065.1| hypothetical protein
            POPTR_0010s06150g [Populus trichocarpa]
          Length = 591

 Score =  493 bits (1269), Expect = e-136
 Identities = 291/614 (47%), Positives = 332/614 (54%), Gaps = 4/614 (0%)
 Frame = +2

Query: 305  EGFLQMHRSEAPVRTGI-GNGGLQAQKTDVLESTLEAGGSQGLSIPG--VSAEGKYSNA- 472
            E FLQMH SEAP      GNGG Q +     ES +E GGSQ L+  G  V+ EGKYSNA 
Sbjct: 42   ENFLQMHGSEAPAPPATAGNGGFQTRNAH--ESRVETGGSQVLATSGAGVAVEGKYSNAG 99

Query: 473  AHFPDQRVGPLAAKGPELGSVNYTDGALVSQKGRVNEMTTDGQVRNLGFQGSTLIPHKSG 652
            AHFP+Q+   +  +  ++GS+ Y DG+ V+Q                  +GS        
Sbjct: 100  AHFPEQKQAGIGVEANDVGSIGYGDGSSVAQ------------------KGSA------- 134

Query: 653  VDSTNMPGKIVSESAPLLNSDPGGPRGAPQISXXXXXXXXXXXXXXXXXXXXDNQIRVNE 832
                                   GPRG PQ+                      N+  VNE
Sbjct: 135  -----------------------GPRGVPQMQVNQMNMNADV-----------NRPVVNE 160

Query: 833  NQIRPSVENGPTMLFVGELHWWTTDSELESVLSQYGRVKEIKFFDERASGKSKGYCQVEF 1012
            NQ+RP +ENGPT L+VGELHWWTTD+ELESV SQYGRVKEIKFFDERASGKSKGYCQV+F
Sbjct: 161  NQVRPPIENGPTTLYVGELHWWTTDAELESVASQYGRVKEIKFFDERASGKSKGYCQVDF 220

Query: 1013 YDPGAASACKEGMNGYLFNGRACVVAFASPQTLKQMGASYMNKSQVQPQINQQQGRRPMN 1192
            Y+  AA+ACKEGMN ++FNGR CVVAFAS QTLKQMGASYM+K+Q QPQ  Q QGR  MN
Sbjct: 221  YEAAAAAACKEGMNEHVFNGRPCVVAFASAQTLKQMGASYMSKTQGQPQ-PQSQGRGSMN 279

Query: 1193 DGVGRGGGMNYSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVGPKNMVXXX 1372
            DG+GRGG  NY                                       +GPKNM    
Sbjct: 280  DGMGRGGNANYQSGDGGRNYGRGGWGRGGQGVLNRGPGGGPMRGRG---GMGPKNMAGNV 336

Query: 1373 XXXXXXXXXXXXXXXXXXXXXXXXXXXMMHPQNMMGAGFDPTYMXXXXXXXXXXXXXXXX 1552
                                       MMH Q MMGAGFDP YM                
Sbjct: 337  AGVGSGANGGGYGQGIAGPAFGGPAGGMMHHQGMMGAGFDPLYMGRGGGYGGFPGHGFPG 396

Query: 1553 MIPSFPAVNTMGLAGVAPHVNPAFFGRXXXXXXXXXXXXXXXDAHHAGMWTDTSMGGWGG 1732
            M+PSFPAVN+MGLAGVAPHVNPAFF R               +  + G W DTSMGGWG 
Sbjct: 397  MLPSFPAVNSMGLAGVAPHVNPAFFARGMAPNGMGMMASSGMEGPNPGKWPDTSMGGWG- 455

Query: 1733 DEHGRRTRESSYGGDDGASEYGYGEASHEKGVRSNAAPREKERGSEREWSGNSXXXXXXX 1912
            +E GRRTRESSY GD+GASEYGYGE +HEKG RS+ A REKER SER+WSGNS       
Sbjct: 456  EEPGRRTRESSYDGDEGASEYGYGEGNHEKGARSSGASREKERVSERDWSGNSDRRHRDE 515

Query: 1913 XXXXXXXXXXXXXYREEKDSYRDHRHRERDLVNEDEWDRGQXXXXXXXXXXVMPEEDHRS 2092
                         YREEKD+YR HR RERD   ED+ DRG             PEED+RS
Sbjct: 516  REQDWDRSEREPKYREEKDTYRGHRQRERDSGYEDDRDRGHSSSRARSRSRAAPEEDYRS 575

Query: 2093 RSRDVDYGKRRRLP 2134
            RSRDVDYGKRRR P
Sbjct: 576  RSRDVDYGKRRRPP 589


>gb|EYU30596.1| hypothetical protein MIMGU_mgv1a002773mg [Mimulus guttatus]
          Length = 639

 Score =  467 bits (1202), Expect = e-128
 Identities = 285/667 (42%), Positives = 339/667 (50%), Gaps = 2/667 (0%)
 Frame = +2

Query: 140  MDPMAEEQLDYEDEEXXXXXXXXXXXXXXISXXXXXXXXXXXXXXXXXXXXXXXXEGFLQ 319
            MDP+ +EQLDY DEE              I                         EGF+Q
Sbjct: 1    MDPVTDEQLDYGDEEYGGNQKMQYHHGGAIPALAEDEMIGDDDEYDDLYNDVNVGEGFMQ 60

Query: 320  MHRSEAPVRTGIGNGGLQAQKTDVLESTLEAGGSQGLSIPGVSAEGKYS-NAAHFPDQRV 496
            M RSEAP  + +GN      K     +  EA  SQ ++   V  EG Y+ N     DQ+ 
Sbjct: 61   MQRSEAPPPSAVGNNSFSISKNTAPGTRAEAIASQEVNNGRVGNEGSYAPNGVQLSDQKN 120

Query: 497  GPLAAKGPELGSVNYTDGALVSQKGRVNEMTTDGQVRNLGFQGSTLIPHKSGVDSTNMPG 676
               A  GP             SQ+ R+ E+    Q  +LG+QGS ++ HK+  D  N   
Sbjct: 121  NLTAVGGP-------AQPVDASQRVRLPEVANSSQAAHLGYQGSEIMLHKTATDRMNNSE 173

Query: 677  KIVSESAPLLNSDPGGPRGAPQISXXXXXXXXXXXXXXXXXXXXDNQIRVNENQIRPSV- 853
             IV E A L+  + G  +G PQ                       N+   +E  IRPS  
Sbjct: 174  NIVGEPASLVYPNTGSSKGVPQAPSNLMNSNANVNVNV-------NRSMDDEYLIRPSGG 226

Query: 854  ENGPTMLFVGELHWWTTDSELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFYDPGAAS 1033
            ENG  M++VGELHWWTTD+E+ESVL QYGRVKEIKFFDERASGKSKGYCQVEFYDP AA+
Sbjct: 227  ENGNPMIYVGELHWWTTDAEVESVLIQYGRVKEIKFFDERASGKSKGYCQVEFYDPAAAT 286

Query: 1034 ACKEGMNGYLFNGRACVVAFASPQTLKQMGASYMNKSQVQPQINQQQGRRPMNDGVGRGG 1213
            ACK+GM G++FNGRACVV +A+PQT KQMGASY NK+Q Q Q +Q QGR PMNDG GRG 
Sbjct: 287  ACKDGMQGHIFNGRACVVTYANPQTSKQMGASY-NKNQGQSQ-SQLQGRNPMNDGAGRG- 343

Query: 1214 GMNYSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVGPKNMVXXXXXXXXXX 1393
              N +                                      +G KNM+          
Sbjct: 344  --NGTNYPSGDAGRNFGRGGGWGRGNQAPNRGPGAGPIRGRGGMGNKNMIGNAPGAGGGG 401

Query: 1394 XXXXXXXXXXXXXXXXXXXXMMHPQNMMGAGFDPTYMXXXXXXXXXXXXXXXXMIPSFPA 1573
                                MMHPQ MMG GFD  +M                M+P F  
Sbjct: 402  AYGQGLNGPGFGGPPG----MMHPQGMMGPGFDLAFMGRGGGYGGFSGPPFQGMLPPFQG 457

Query: 1574 VNTMGLAGVAPHVNPAFFGRXXXXXXXXXXXXXXXDAHHAGMWTDTSMGGWGGDEHGRRT 1753
            VN+MGL GVAPHVNPAFFGR                  H+GMW D +MGGWGG+EHGR  
Sbjct: 458  VNSMGLPGVAPHVNPAFFGRGMNPNGMGMMGNPGMVGPHSGMWNDPNMGGWGGEEHGR-- 515

Query: 1754 RESSYGGDDGASEYGYGEASHEKGVRSNAAPREKERGSEREWSGNSXXXXXXXXXXXXXX 1933
             ESSYGG+D ASEYGYGE SH+K VRS+AAPREKER SERE+                  
Sbjct: 516  -ESSYGGEDNASEYGYGEGSHDKSVRSSAAPREKERTSEREYPERK---HREERENDGER 571

Query: 1934 XXXXXXYREEKDSYRDHRHRERDLVNEDEWDRGQXXXXXXXXXXVMPEEDHRSRSRDVDY 2113
                  YREEKD YR+HRH+ER+   +D+WDRGQ          V  EEDHRSRSRD DY
Sbjct: 572  NDRDSKYREEKDRYREHRHKERESGYDDDWDRGQSSRSRSRSGAVQ-EEDHRSRSRDADY 630

Query: 2114 GKRRRLP 2134
            GKRRR+P
Sbjct: 631  GKRRRMP 637


>ref|XP_002315647.1| RNA recognition motif-containing family protein [Populus trichocarpa]
            gi|222864687|gb|EEF01818.1| RNA recognition
            motif-containing family protein [Populus trichocarpa]
          Length = 573

 Score =  455 bits (1170), Expect = e-125
 Identities = 279/614 (45%), Positives = 320/614 (52%), Gaps = 4/614 (0%)
 Frame = +2

Query: 305  EGFLQMHRSEAPVRTGI-GNGGLQAQKTDVLESTLEAGGSQGLSIPG--VSAEGKYSNA- 472
            E FLQMH SEAP      GNGG Q +     ES +E GGSQ L+  G  V+ EGKYSNA 
Sbjct: 42   ENFLQMHGSEAPAPPATAGNGGFQTRNAH--ESRVETGGSQVLATSGAGVAVEGKYSNAG 99

Query: 473  AHFPDQRVGPLAAKGPELGSVNYTDGALVSQKGRVNEMTTDGQVRNLGFQGSTLIPHKSG 652
            AHFP+Q+   +  +  ++GS+ Y DG+ V+Q                  +GS        
Sbjct: 100  AHFPEQKQAGIGVEANDVGSIGYGDGSSVAQ------------------KGSA------- 134

Query: 653  VDSTNMPGKIVSESAPLLNSDPGGPRGAPQISXXXXXXXXXXXXXXXXXXXXDNQIRVNE 832
                                   GPRG PQ+                      N+  VNE
Sbjct: 135  -----------------------GPRGVPQMQVNQMNMNADV-----------NRPVVNE 160

Query: 833  NQIRPSVENGPTMLFVGELHWWTTDSELESVLSQYGRVKEIKFFDERASGKSKGYCQVEF 1012
            NQ+RP +ENGPT L+VGELHWWTTD+ELESV SQYGRVKEIKFFDERASGKSKGYCQV+F
Sbjct: 161  NQVRPPIENGPTTLYVGELHWWTTDAELESVASQYGRVKEIKFFDERASGKSKGYCQVDF 220

Query: 1013 YDPGAASACKEGMNGYLFNGRACVVAFASPQTLKQMGASYMNKSQVQPQINQQQGRRPMN 1192
            Y+  AA+ACKEGMN ++FNGR CVVAFAS QTLKQMGASYM+K+Q QPQ  Q QGR  MN
Sbjct: 221  YEAAAAAACKEGMNEHVFNGRPCVVAFASAQTLKQMGASYMSKTQGQPQ-PQSQGRGSMN 279

Query: 1193 DGVGRGGGMNYSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVGPKNMVXXX 1372
            DG+GRGG  NY                                       +GPKNM    
Sbjct: 280  DGMGRGGNANYQ---SGDGGRNYGRGGWGRGGQGVLNRGPGGGPMRGRGGMGPKNMAGNV 336

Query: 1373 XXXXXXXXXXXXXXXXXXXXXXXXXXXMMHPQNMMGAGFDPTYMXXXXXXXXXXXXXXXX 1552
                                       MMH Q MMGAGFDP YM                
Sbjct: 337  AGVGSGANGGGYGQGIAGPAFGGPAGGMMHHQGMMGAGFDPLYMGRGGGYGGFPGHGFPG 396

Query: 1553 MIPSFPAVNTMGLAGVAPHVNPAFFGRXXXXXXXXXXXXXXXDAHHAGMWTDTSMGGWGG 1732
            M+PSFPAVN+MGLAGVAPHVNPAFF R                 +  GM   + M G   
Sbjct: 397  MLPSFPAVNSMGLAGVAPHVNPAFFARGMA-------------PNGMGMMASSGMEG--- 440

Query: 1733 DEHGRRTRESSYGGDDGASEYGYGEASHEKGVRSNAAPREKERGSEREWSGNSXXXXXXX 1912
                   +ESSY GD+GASEYGYGE +HEKG RS+ A REKER SER+WSGNS       
Sbjct: 441  ---PNPGKESSYDGDEGASEYGYGEGNHEKGARSSGASREKERVSERDWSGNSDRRHRDE 497

Query: 1913 XXXXXXXXXXXXXYREEKDSYRDHRHRERDLVNEDEWDRGQXXXXXXXXXXVMPEEDHRS 2092
                         YREEKD+YR HR RERD   ED+ DRG             PEED+RS
Sbjct: 498  REQDWDRSEREPKYREEKDTYRGHRQRERDSGYEDDRDRGHSSSRARSRSRAAPEEDYRS 557

Query: 2093 RSRDVDYGKRRRLP 2134
            RSRDVDYGKRRR P
Sbjct: 558  RSRDVDYGKRRRPP 571


>ref|XP_006483997.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            CG7185-like isoform X1 [Citrus sinensis]
          Length = 658

 Score =  390 bits (1001), Expect = e-105
 Identities = 209/364 (57%), Positives = 242/364 (66%), Gaps = 2/364 (0%)
 Frame = +2

Query: 140  MDPMAEEQLDYEDEEXXXXXXXXXXXXXXISXXXXXXXXXXXXXXXXXXXXXXXXEGFLQ 319
            MD MAEEQ+DYE+EE              I                         +G LQ
Sbjct: 1    MDSMAEEQIDYEEEEYGGAQKMQYQGGGAIPALADEELMGEDDEYDDLYNDVNVGDGLLQ 60

Query: 320  MHRSEAPVRT-GIGNGGLQAQKTDVLESTLEAGGSQGLSIPGVSAEGKYSNAA-HFPDQR 493
              + EAP  + G+GNG LQ +KTDV E  ++AG SQG ++PGVS EGKY+NA  HFP Q 
Sbjct: 61   FQQPEAPPPSAGVGNGRLQVKKTDVPEQQVQAGVSQGSNVPGVSVEGKYTNAGTHFPAQN 120

Query: 494  VGPLAAKGPELGSVNYTDGALVSQKGRVNEMTTDGQVRNLGFQGSTLIPHKSGVDSTNMP 673
               +A   P +GS NY DGA VSQKG V E T D  VRN+GFQGST  P ++GVD +NMP
Sbjct: 121  DVQVAVNRPNMGSGNYPDGASVSQKGSVQETTHDAHVRNMGFQGSTSGPSRTGVDPSNMP 180

Query: 674  GKIVSESAPLLNSDPGGPRGAPQISXXXXXXXXXXXXXXXXXXXXDNQIRVNENQIRPSV 853
            G++ +E AP+LN    GP+GA                         N+  VNENQIRP +
Sbjct: 181  GRVANEPAPVLNPGAAGPQGA------------LIPANQMGVNINVNRAMVNENQIRPPL 228

Query: 854  ENGPTMLFVGELHWWTTDSELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFYDPGAAS 1033
            ENG TMLFVGELHWWTTD+ELESVLSQYGRVKEIKFFDERASGKSKGYCQVEF+D  AA+
Sbjct: 229  ENGGTMLFVGELHWWTTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFFDAAAAA 288

Query: 1034 ACKEGMNGYLFNGRACVVAFASPQTLKQMGASYMNKSQVQPQINQQQGRRPMNDGVGRGG 1213
            ACK+GMNG++FNGR CVVAFASPQTLKQMGASYMNK+Q QPQ +Q QGRRPMNDG GRGG
Sbjct: 289  ACKDGMNGHVFNGRPCVVAFASPQTLKQMGASYMNKNQGQPQ-SQTQGRRPMNDGGGRGG 347

Query: 1214 GMNY 1225
             MNY
Sbjct: 348  NMNY 351



 Score =  267 bits (682), Expect = 2e-68
 Identities = 135/230 (58%), Positives = 148/230 (64%), Gaps = 3/230 (1%)
 Frame = +2

Query: 1454 MMHPQNMMGAGFDPTYMXXXXXXXXXXXXXXXXMIPSFPAVNTMGLAGVAPHVNPAFFGR 1633
            MMHPQNMMG GFDPTYM                M+PSFPAVN MGLAGVAPHVNPAFF R
Sbjct: 428  MMHPQNMMG-GFDPTYMGRGGGYGGFSGPGFPGMLPSFPAVNAMGLAGVAPHVNPAFFNR 486

Query: 1634 XXXXXXXXXXXXXXXDAHHAGMWTDTSMGGWGGDEHGRRTRESSYGGDDGASEYGYGEAS 1813
                           D  H GMWTD+SMGGW G+EHGRRTRESSYGGDDGAS+YGYGEA+
Sbjct: 487  GMAANGMGMMGSSGMDGPHPGMWTDSSMGGWLGEEHGRRTRESSYGGDDGASDYGYGEAN 546

Query: 1814 HEKGVRSNAAPREKERGSEREWSGNS---XXXXXXXXXXXXXXXXXXXXYREEKDSYRDH 1984
            HEKG RS AA REK+RGSER+WSGN+                       +REEKDSYRD 
Sbjct: 547  HEKGARSTAASREKDRGSERDWSGNTDRRHREEREQDWDRSERDHRDHRHREEKDSYRDR 606

Query: 1985 RHRERDLVNEDEWDRGQXXXXXXXXXXVMPEEDHRSRSRDVDYGKRRRLP 2134
            R R+RD   +D WDRG            +P+EDHRSRSRDVDYGKRRRLP
Sbjct: 607  RQRDRDSTYDDNWDRGPSSSRSRSRSRAIPDEDHRSRSRDVDYGKRRRLP 656


>ref|XP_006438179.1| hypothetical protein CICLE_v10030915mg [Citrus clementina]
            gi|557540375|gb|ESR51419.1| hypothetical protein
            CICLE_v10030915mg [Citrus clementina]
          Length = 658

 Score =  389 bits (1000), Expect = e-105
 Identities = 209/364 (57%), Positives = 242/364 (66%), Gaps = 2/364 (0%)
 Frame = +2

Query: 140  MDPMAEEQLDYEDEEXXXXXXXXXXXXXXISXXXXXXXXXXXXXXXXXXXXXXXXEGFLQ 319
            MD MAEEQ+DYE+EE              I                         +G LQ
Sbjct: 1    MDSMAEEQIDYEEEEYGGAQKMQYQGGGAIPALADEELMGEDDEYDDLYNDVNVGDGLLQ 60

Query: 320  MHRSEAPVRT-GIGNGGLQAQKTDVLESTLEAGGSQGLSIPGVSAEGKYSNAA-HFPDQR 493
              + EAP  + G+GNG LQ +KTDV E  ++AG SQG ++PGVS EGKY+NA  HFP Q 
Sbjct: 61   FQQPEAPPPSAGVGNGRLQVKKTDVPEQQVQAGVSQGSNVPGVSVEGKYTNAGTHFPAQN 120

Query: 494  VGPLAAKGPELGSVNYTDGALVSQKGRVNEMTTDGQVRNLGFQGSTLIPHKSGVDSTNMP 673
               +A   P +GS NY DGA VSQKG V E T D  VRN+GFQGST  P ++GVD +NMP
Sbjct: 121  DVQVAVNRPNMGSGNYPDGASVSQKGSVQETTHDAHVRNMGFQGSTSGPPRTGVDPSNMP 180

Query: 674  GKIVSESAPLLNSDPGGPRGAPQISXXXXXXXXXXXXXXXXXXXXDNQIRVNENQIRPSV 853
            G++ +E AP+LN    GP+GA                         N+  VNENQIRP +
Sbjct: 181  GRVANEPAPVLNPGAAGPQGA------------LIPANQMGVNINVNRAMVNENQIRPPL 228

Query: 854  ENGPTMLFVGELHWWTTDSELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFYDPGAAS 1033
            ENG TMLFVGELHWWTTD+ELESVLSQYGRVKEIKFFDERASGKSKGYCQVEF+D  AA+
Sbjct: 229  ENGGTMLFVGELHWWTTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFFDAAAAA 288

Query: 1034 ACKEGMNGYLFNGRACVVAFASPQTLKQMGASYMNKSQVQPQINQQQGRRPMNDGVGRGG 1213
            ACK+GMNG++FNGR CVVAFASPQTLKQMGASYMNK+Q QPQ +Q QGRRPMNDG GRGG
Sbjct: 289  ACKDGMNGHVFNGRPCVVAFASPQTLKQMGASYMNKNQGQPQ-SQTQGRRPMNDGGGRGG 347

Query: 1214 GMNY 1225
             MNY
Sbjct: 348  NMNY 351



 Score =  267 bits (683), Expect = 2e-68
 Identities = 135/230 (58%), Positives = 148/230 (64%), Gaps = 3/230 (1%)
 Frame = +2

Query: 1454 MMHPQNMMGAGFDPTYMXXXXXXXXXXXXXXXXMIPSFPAVNTMGLAGVAPHVNPAFFGR 1633
            MMHPQNMMG GFDPTYM                M+PSFPAVN MGLAGVAPHVNPAFF R
Sbjct: 428  MMHPQNMMG-GFDPTYMGRGGGYGGFSGPGFPGMLPSFPAVNAMGLAGVAPHVNPAFFNR 486

Query: 1634 XXXXXXXXXXXXXXXDAHHAGMWTDTSMGGWGGDEHGRRTRESSYGGDDGASEYGYGEAS 1813
                           D  H GMWTD+SMGGW G+EHGRRTRESSYGGDDGAS+YGYGEA+
Sbjct: 487  GMAANGMGMMGSSGMDGPHPGMWTDSSMGGWVGEEHGRRTRESSYGGDDGASDYGYGEAN 546

Query: 1814 HEKGVRSNAAPREKERGSEREWSGNS---XXXXXXXXXXXXXXXXXXXXYREEKDSYRDH 1984
            HEKG RS AA REK+RGSER+WSGN+                       +REEKDSYRD 
Sbjct: 547  HEKGARSTAASREKDRGSERDWSGNTDRRHREEREQDWDRSERDHRDHRHREEKDSYRDR 606

Query: 1985 RHRERDLVNEDEWDRGQXXXXXXXXXXVMPEEDHRSRSRDVDYGKRRRLP 2134
            R R+RD   +D WDRG            +P+EDHRSRSRDVDYGKRRRLP
Sbjct: 607  RQRDRDSTYDDNWDRGPSSSRSRSRSRAIPDEDHRSRSRDVDYGKRRRLP 656


>ref|XP_006483998.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            CG7185-like isoform X1 [Citrus sinensis]
          Length = 655

 Score =  383 bits (984), Expect = e-103
 Identities = 204/361 (56%), Positives = 239/361 (66%), Gaps = 2/361 (0%)
 Frame = +2

Query: 149  MAEEQLDYEDEEXXXXXXXXXXXXXXISXXXXXXXXXXXXXXXXXXXXXXXXEGFLQMHR 328
            MAEEQ+DYE++E              I                         +G LQ  +
Sbjct: 1    MAEEQIDYEEDEYGGAQKMQYQGGGAIPALADEELMGEDDEYDDLYNDVNVGDGLLQFQQ 60

Query: 329  SEAPVRT-GIGNGGLQAQKTDVLESTLEAGGSQGLSIPGVSAEGKYSNA-AHFPDQRVGP 502
             EAP  + G+GNG LQ +KTDV E  ++ GGSQG +IPGVS EGKY+NA +HFP Q    
Sbjct: 61   PEAPPPSAGVGNGRLQVKKTDVPEQRVQVGGSQGSNIPGVSVEGKYTNAGSHFPAQNDVQ 120

Query: 503  LAAKGPELGSVNYTDGALVSQKGRVNEMTTDGQVRNLGFQGSTLIPHKSGVDSTNMPGKI 682
            +A   P +GS NY DGA VSQKG V E T D  VRN+GFQGST  P ++GVD +NMPG++
Sbjct: 121  VAVNRPNMGSGNYPDGASVSQKGSVQETTHDAHVRNMGFQGSTSGPSRTGVDPSNMPGRV 180

Query: 683  VSESAPLLNSDPGGPRGAPQISXXXXXXXXXXXXXXXXXXXXDNQIRVNENQIRPSVENG 862
             +E AP+LN    GP+GA                         N++ VNENQIRP +ENG
Sbjct: 181  ANEPAPVLNPGAAGPQGA------------LIPANQMGVNANVNRVMVNENQIRPPLENG 228

Query: 863  PTMLFVGELHWWTTDSELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFYDPGAASACK 1042
             TMLFVGELHWWTTD+ELESVLSQYGR KEIKFFDERASGKSKGYCQVEF+D  AA+ACK
Sbjct: 229  GTMLFVGELHWWTTDAELESVLSQYGRAKEIKFFDERASGKSKGYCQVEFFDAAAAAACK 288

Query: 1043 EGMNGYLFNGRACVVAFASPQTLKQMGASYMNKSQVQPQINQQQGRRPMNDGVGRGGGMN 1222
            +GMNG++FNGR CVVAFASPQTLKQMGASYMNK+Q QPQ +Q QG RPMNDG GRGG  N
Sbjct: 289  DGMNGHVFNGRPCVVAFASPQTLKQMGASYMNKNQGQPQ-SQNQGSRPMNDGGGRGGNTN 347

Query: 1223 Y 1225
            Y
Sbjct: 348  Y 348



 Score =  269 bits (688), Expect = 4e-69
 Identities = 136/230 (59%), Positives = 149/230 (64%), Gaps = 3/230 (1%)
 Frame = +2

Query: 1454 MMHPQNMMGAGFDPTYMXXXXXXXXXXXXXXXXMIPSFPAVNTMGLAGVAPHVNPAFFGR 1633
            MMHPQNMMG GFDPTYM                M+PSFPAVN MGLAGVAPHVNPAFF R
Sbjct: 425  MMHPQNMMG-GFDPTYMGRGGGYGGFSGPGFPGMLPSFPAVNAMGLAGVAPHVNPAFFNR 483

Query: 1634 XXXXXXXXXXXXXXXDAHHAGMWTDTSMGGWGGDEHGRRTRESSYGGDDGASEYGYGEAS 1813
                           D  H GMWTD+SMGGW G+EHGRRTRESSYGGDDGAS+YGYGEA+
Sbjct: 484  GMAANGMGMMGSSGMDGPHPGMWTDSSMGGWLGEEHGRRTRESSYGGDDGASDYGYGEAN 543

Query: 1814 HEKGVRSNAAPREKERGSEREWSGNS---XXXXXXXXXXXXXXXXXXXXYREEKDSYRDH 1984
            HEKG RS AA REK+RGSER+WSGN+                       +REEKDSYRD 
Sbjct: 544  HEKGARSTAASREKDRGSERDWSGNTDRRHREEREQDWDRSERDHRDHRHREEKDSYRDR 603

Query: 1985 RHRERDLVNEDEWDRGQXXXXXXXXXXVMPEEDHRSRSRDVDYGKRRRLP 2134
            R R+RD   +D WDRGQ           +P+EDHRSRSRDVDYGKRRRLP
Sbjct: 604  RQRDRDSTYDDNWDRGQSSSRSRSRSGAIPDEDHRSRSRDVDYGKRRRLP 653


>ref|XP_006438180.1| hypothetical protein CICLE_v10030917mg [Citrus clementina]
            gi|567891321|ref|XP_006438181.1| hypothetical protein
            CICLE_v10030917mg [Citrus clementina]
            gi|557540376|gb|ESR51420.1| hypothetical protein
            CICLE_v10030917mg [Citrus clementina]
            gi|557540377|gb|ESR51421.1| hypothetical protein
            CICLE_v10030917mg [Citrus clementina]
          Length = 655

 Score =  378 bits (971), Expect = e-102
 Identities = 203/361 (56%), Positives = 237/361 (65%), Gaps = 2/361 (0%)
 Frame = +2

Query: 149  MAEEQLDYEDEEXXXXXXXXXXXXXXISXXXXXXXXXXXXXXXXXXXXXXXXEGFLQMHR 328
            MAEEQ+DYE++E              I                         +G LQ  +
Sbjct: 1    MAEEQIDYEEDEYGGAQKMQYQGGGAIPALADEELMGEDDEYDDLYNDINVGDGLLQFQQ 60

Query: 329  SEAPVRT-GIGNGGLQAQKTDVLESTLEAGGSQGLSIPGVSAEGKYSNA-AHFPDQRVGP 502
             EAP  + G+GNG LQ +KTDV E  ++ GGSQG +IPGVS EGKY+NA + FP Q    
Sbjct: 61   PEAPPPSAGVGNGRLQVKKTDVPEQRVQVGGSQGSNIPGVSVEGKYTNAGSDFPAQNDVQ 120

Query: 503  LAAKGPELGSVNYTDGALVSQKGRVNEMTTDGQVRNLGFQGSTLIPHKSGVDSTNMPGKI 682
            +A   P +GS NY DGA VSQKG V E T D  VRN+GFQGST  P ++GVD +NMPG+ 
Sbjct: 121  VAVNRPNMGSGNYPDGASVSQKGSVQETTHDAHVRNMGFQGSTSGPSRTGVDPSNMPGRA 180

Query: 683  VSESAPLLNSDPGGPRGAPQISXXXXXXXXXXXXXXXXXXXXDNQIRVNENQIRPSVENG 862
             +E AP+LN    GP+GA                         N++ VNENQIRP +ENG
Sbjct: 181  ANEPAPVLNPGAAGPQGA------------LIPANQMGVNANVNRVMVNENQIRPPLENG 228

Query: 863  PTMLFVGELHWWTTDSELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFYDPGAASACK 1042
             TMLFVGELHWWTTD+ELESVLSQYGR KEIKFFDERASGKSKGYCQVEF+D  AA+ACK
Sbjct: 229  GTMLFVGELHWWTTDAELESVLSQYGRAKEIKFFDERASGKSKGYCQVEFFDAAAAAACK 288

Query: 1043 EGMNGYLFNGRACVVAFASPQTLKQMGASYMNKSQVQPQINQQQGRRPMNDGVGRGGGMN 1222
            +GMNG++FNGR CVVAFASPQTLKQMGASYMNK+Q QPQ +Q QG RPMNDG GRGG  N
Sbjct: 289  DGMNGHVFNGRPCVVAFASPQTLKQMGASYMNKNQGQPQ-SQNQGSRPMNDGGGRGGNTN 347

Query: 1223 Y 1225
            Y
Sbjct: 348  Y 348



 Score =  269 bits (688), Expect = 4e-69
 Identities = 136/230 (59%), Positives = 148/230 (64%), Gaps = 3/230 (1%)
 Frame = +2

Query: 1454 MMHPQNMMGAGFDPTYMXXXXXXXXXXXXXXXXMIPSFPAVNTMGLAGVAPHVNPAFFGR 1633
            MMHPQNMMG GFDPTYM                M+PSFPAVN MGLAGVAPHVNPAFF R
Sbjct: 425  MMHPQNMMG-GFDPTYMGRGGGYGGFSGPGFPGMLPSFPAVNAMGLAGVAPHVNPAFFNR 483

Query: 1634 XXXXXXXXXXXXXXXDAHHAGMWTDTSMGGWGGDEHGRRTRESSYGGDDGASEYGYGEAS 1813
                           D  H GMWTD+SMGGW G+EHGRRTRESSYGGDDGAS+YGYGEAS
Sbjct: 484  GMAANGMGMMGSSGMDGPHPGMWTDSSMGGWVGEEHGRRTRESSYGGDDGASDYGYGEAS 543

Query: 1814 HEKGVRSNAAPREKERGSEREWSGNS---XXXXXXXXXXXXXXXXXXXXYREEKDSYRDH 1984
            HEKG RS  A REK+RGSER+WSGN+                       +REEKDSYRD 
Sbjct: 544  HEKGARSTTASREKDRGSERDWSGNTDRRHREEREQDWDRSERDHRDHRHREEKDSYRDR 603

Query: 1985 RHRERDLVNEDEWDRGQXXXXXXXXXXVMPEEDHRSRSRDVDYGKRRRLP 2134
            R R+RD   +D WDRGQ           +P+EDHRSRSRDVDYGKRRRLP
Sbjct: 604  RQRDRDSTYDDNWDRGQSSSRSRSRSGAIPDEDHRSRSRDVDYGKRRRLP 653


>ref|XP_002889992.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
            lyrata] gi|297335834|gb|EFH66251.1| RNA recognition
            motif-containing protein [Arabidopsis lyrata subsp.
            lyrata]
          Length = 573

 Score =  327 bits (838), Expect = 2e-86
 Identities = 237/618 (38%), Positives = 296/618 (47%), Gaps = 10/618 (1%)
 Frame = +2

Query: 305  EGFLQMHRSEAPVRT--GIGNGGLQAQKTDVLESTLEAGGSQGLSIPGVSAEGKYSNAAH 478
            E F Q H    P     G GN  LQAQ + V      A    G+ + G + EGKY N   
Sbjct: 47   ESFFQAHNQPQPPAQVGGTGNASLQAQTSHVA-----AEPRMGI-VSGGTVEGKYRNDG- 99

Query: 479  FPDQRVGPLAAKGPELGSVNYTDGALVSQKGRVNEMTTDGQVRNLGFQGSTLIP---HKS 649
                  G     GP+  S  Y   +    KG    +  D Q   +G QGST +    H  
Sbjct: 100  ------GHNGISGPDTRSDVYPQASSFGAKG----LNIDIQSNKIGQQGSTSVVLNNHGF 149

Query: 650  GVDSTNMPGKIVSESAPLLNSDPGGPRGAPQISXXXXXXXXXXXXXXXXXXXXDNQIRVN 829
              ++ N+P        P+ N     P+GA QI                     +  + +N
Sbjct: 150  SGNAVNVP------ELPVHNPYGAPPQGAQQIPVSQMSV--------------NPNVMMN 189

Query: 830  ENQIRPSV-ENGPTMLFVGELHWWTTDSELESVLSQYGRVKEIKFFDERASGKSKGYCQV 1006
            ++  +P V +NG TMLFVGELHWWTTD+E+ESVLSQYGRVKEIKFFDER SGKSKGYCQV
Sbjct: 190  KSPTQPFVVDNGNTMLFVGELHWWTTDAEIESVLSQYGRVKEIKFFDERVSGKSKGYCQV 249

Query: 1007 EFYDPGAASACKEGMNGYLFNGRACVVAFASPQTLKQMGASYMNKSQVQPQINQQQGRRP 1186
            EFYD  AA++CKEGMNGY+FNG+ACVVAFASP+TLKQMGA++  ++Q Q   NQ Q RRP
Sbjct: 250  EFYDSAAAASCKEGMNGYIFNGKACVVAFASPETLKQMGANFTGRNQGQ---NQIQNRRP 306

Query: 1187 MNDGVGRGGGMNYSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVGPKNMVX 1366
            +N+G+GR  G N +                                       GP NM  
Sbjct: 307  LNEGMGR--GNNNNNMNTQNGDGGRNYGRGGFARGGQGMSNRGGPWGGGMRGRGPNNMAS 364

Query: 1367 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXMMHPQNMMGAG-FDPTYMXXXXXXXXXXXXX 1543
                                         MMHPQ MMGAG FDPT+M             
Sbjct: 365  GSGTGPYGPGLAGPAFGG-----------MMHPQGMMGAGGFDPTFMGRGGGFGGYSGIA 413

Query: 1544 XXXMIPSFPAVNTMGLAGVAPHVNPAFFGRXXXXXXXXXXXXXXXDAHHAGMWTDTSMGG 1723
               M  S+P VN MG+ GVAPHVNPAFFG                  H A MW++ + G 
Sbjct: 414  YPGMPHSYPGVNAMGMVGVAPHVNPAFFG----TGMGTMGSAGMNGVHAAAMWSEANGG- 468

Query: 1724 WGGDEHGRRTRESSYGGDDGASEY-GYGEASHEKGVRSNAAPREKERG-SEREWSGNSXX 1897
                           GG++G SEY GY + + EK  + +   R+KER  +ER+WS NS  
Sbjct: 469  ---------------GGEEGGSEYGGYEDETQEKEEKPS---RDKERATTERDWSENS-- 508

Query: 1898 XXXXXXXXXXXXXXXXXXYREEKDSYRDHR-HRERDLVNEDEWDRGQXXXXXXXXXXVMP 2074
                              +REEKDS+R+++  R+RD    DE+DRGQ           M 
Sbjct: 509  -----------GDRRHKSHREEKDSHREYKQQRDRD---SDEFDRGQSSVKSRSRSR-MS 553

Query: 2075 EEDHRSRSRDVDYGKRRR 2128
            E+DHRSRSRD DYGKRRR
Sbjct: 554  EDDHRSRSRDADYGKRRR 571