BLASTX nr result
ID: Paeonia25_contig00006597
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Paeonia25_contig00006597
(4616 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002285900.1| PREDICTED: DNA-directed RNA polymerase II su... 2761 0.0
ref|XP_007203058.1| hypothetical protein PRUPE_ppa000093mg [Prun... 2698 0.0
ref|XP_004287766.1| PREDICTED: DNA-directed RNA polymerase II su... 2695 0.0
ref|XP_006828844.1| hypothetical protein AMTR_s00001p00152770 [A... 2685 0.0
ref|XP_004169177.1| PREDICTED: DNA-directed RNA polymerase II su... 2675 0.0
ref|XP_004146161.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 2675 0.0
ref|XP_006383037.1| DNA-directed RNA polymerase II largest subun... 2674 0.0
gb|EXC35292.1| DNA-directed RNA polymerase II subunit rpb1 [Moru... 2674 0.0
ref|XP_006590737.1| PREDICTED: DNA-directed RNA polymerase II su... 2668 0.0
ref|XP_007157862.1| hypothetical protein PHAVU_002G104500g [Phas... 2665 0.0
ref|XP_002530639.1| DNA-directed RNA polymerase II largest subun... 2665 0.0
ref|XP_006425357.1| hypothetical protein CICLE_v10024686mg [Citr... 2660 0.0
gb|EYU42342.1| hypothetical protein MIMGU_mgv1a000091mg [Mimulus... 2660 0.0
ref|XP_006467031.1| PREDICTED: DNA-directed RNA polymerase II su... 2660 0.0
ref|XP_006467030.1| PREDICTED: DNA-directed RNA polymerase II su... 2660 0.0
ref|XP_006467029.1| PREDICTED: DNA-directed RNA polymerase II su... 2660 0.0
ref|XP_006467027.1| PREDICTED: DNA-directed RNA polymerase II su... 2660 0.0
ref|XP_007046584.1| DNA-directed RNA polymerase II subunit RPB1 ... 2660 0.0
ref|XP_004232527.1| PREDICTED: DNA-directed RNA polymerase II su... 2660 0.0
ref|XP_006340787.1| PREDICTED: DNA-directed RNA polymerase II su... 2659 0.0
>ref|XP_002285900.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB1-like [Vitis
vinifera]
Length = 1848
Score = 2761 bits (7156), Expect = 0.0
Identities = 1358/1462 (92%), Positives = 1415/1462 (96%)
Frame = +2
Query: 2 AECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEDDHKFKLAQKVKNPKAR 181
AECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADE+DHKFK AQK++NPK R
Sbjct: 74 AECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEEDHKFKQAQKIRNPKNR 133
Query: 182 LKRILDACKNKTKCEGGDEIEGQGRDSEEPVKKARGGCGAQQPKLTIEGMKMIAEYKLQR 361
LK+ILDACKNK+KCEGGDEIE Q DS+EPVKK+RGGCGAQQPKLTIEGMKMIAEYK+QR
Sbjct: 134 LKKILDACKNKSKCEGGDEIETQALDSDEPVKKSRGGCGAQQPKLTIEGMKMIAEYKIQR 193
Query: 362 KKSDDQEQLPEPVERKQQLSAERVLSVLKRISDEDCNLLGLNPKYARPDWMILQVLXXXX 541
KK+DD EQLPEPVERKQQLSAERVL+VLKRISDEDC LLGLNPKYARPDWMILQVL
Sbjct: 194 KKNDDPEQLPEPVERKQQLSAERVLNVLKRISDEDCILLGLNPKYARPDWMILQVLPIPP 253
Query: 542 XXXXXSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIISEFAQLLQFHVATY 721
SVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIISEFAQLLQFHVATY
Sbjct: 254 PPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIISEFAQLLQFHVATY 313
Query: 722 FDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDQ 901
FDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINID+
Sbjct: 314 FDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDE 373
Query: 902 LGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIREDGQRLDLRYLKK 1081
LGVPWSIALNLTYPETVTPYNIERLKELVE GPHPPPGKTGAKYIIREDGQRLDLRYLKK
Sbjct: 374 LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIREDGQRLDLRYLKK 433
Query: 1082 SSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNA 1261
SSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNA
Sbjct: 434 SSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNA 493
Query: 1262 DFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKITKRDTF 1441
DFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDTLLGCRKITKRDTF
Sbjct: 494 DFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTF 553
Query: 1442 IEKDVFMNILMWWEDFDGKVPAPTILKPRPLWTGKQVFNLIIPKQINLMRTSAWHSESET 1621
IEKDVFMNILMWWEDFDGK+PAP ILKPRPLWTGKQVFNLIIPKQINL+RTSAWHSESET
Sbjct: 554 IEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQINLLRTSAWHSESET 613
Query: 1622 GFLTPGDTQVRIERGEVITGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNY 1801
GF+TPGDTQVRIE+GE++ GTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNY
Sbjct: 614 GFITPGDTQVRIEKGELLAGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNY 673
Query: 1802 WLLQQAFSIGIGDTIADASTMEKINETISKAKNEVKELIRAAQEKQLEAEPGRTMMDSFE 1981
WLLQ FSIGIGDTIADA+TMEKINETISKAKNEVKELIRAAQE+QLEAEPGRTMM+SFE
Sbjct: 674 WLLQNGFSIGIGDTIADAATMEKINETISKAKNEVKELIRAAQERQLEAEPGRTMMESFE 733
Query: 1982 NRVNQVLNKARDDAGSSAQKSLAESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRI 2161
NRVNQVLNKARDDAGSSAQKSL+ESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRI
Sbjct: 734 NRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRI 793
Query: 2162 PYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETG 2341
PYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETG
Sbjct: 794 PYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETG 853
Query: 2342 YIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQRLDSLKMKKGEFNK 2521
YIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIE+Q+LDSLKMKKGEF++
Sbjct: 854 YIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIETQKLDSLKMKKGEFDR 913
Query: 2522 VYGYEFDDENWNPSYLLPEHVDDLQNIREFRNVFDAELKKLEEDRLQLGKDIVTTGDDVW 2701
V+ YE DDENWNPSY+LPEHV+DL+ IREFRNVFDAE++KLE DR QLG +I TTGD+ W
Sbjct: 914 VFKYEIDDENWNPSYMLPEHVEDLKTIREFRNVFDAEVQKLEADRFQLGTEIATTGDNSW 973
Query: 2702 PMPVNLKRLIWNAQKTFKIDLRRPSGMHPMEIVEAVDKLQERLKVVHGDDPMSTEAQKNA 2881
PMPVNLKRLIWNAQKTFK+DLRRPS MHPMEIVEAVDKLQERLKVV GDD +S EAQKNA
Sbjct: 974 PMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLKVVPGDDLISMEAQKNA 1033
Query: 2882 TLFFNILLRSTLASKRVLKEYRLTKEAFEWVVGEIESRFLQSLVASGEMIGCVAAQSIGE 3061
TLFFNILLRST ASKRVLKEYRLT+EAFEWV+GEIESRFLQSLVA GEMIGCVAAQSIGE
Sbjct: 1034 TLFFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGE 1093
Query: 3062 PATQMTLNTFHFAGVSAKNVTLGVPRLREIINIAKKIKTPSLSVYLKPEVNKTKERAKNV 3241
PATQMTLNTFH+AGVSAKNVTLGVPRLREIIN+AKKIKTPSLSVYLKP+V+KTKERAKNV
Sbjct: 1094 PATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKPDVSKTKERAKNV 1153
Query: 3242 QCALEYTTLRSVTQATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEEISPDKISPWLLRVE 3421
QCALEYTTLRSVTQATEVWYDPDPMSTIIEED+DFVKSYYEMPDEE++P+KISPWLLR+E
Sbjct: 1154 QCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVDFVKSYYEMPDEEVAPEKISPWLLRIE 1213
Query: 3422 LNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGELNDES 3601
LNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGEL DES
Sbjct: 1214 LNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGELQDES 1273
Query: 3602 AEDDVFLKKIESNMLTEMALRGIPDINKVFIKNWKRVRFDDDEGFMPEVEWMLDTEGVNL 3781
AEDDVFLKKIESNMLTEMALRGIPDINKVFIK+ K +FD+ EGF PEVEWMLDTEGVNL
Sbjct: 1274 AEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNKFDESEGFKPEVEWMLDTEGVNL 1333
Query: 3782 LAVICHEDVDATRTTSNHLIEVMEVLGIEAVRKSLLDELRVVISFDGSYVNYRHLAILCD 3961
LAV+CHEDVDA RTTSNHLIEV+EVLGIEAVR+SLLDELRVVISFDGSYVNYRHLAILCD
Sbjct: 1334 LAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAILCD 1393
Query: 3962 TMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDHLRGVTENIMLGQL 4141
TMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETD LRGVTENIMLGQL
Sbjct: 1394 TMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDFLRGVTENIMLGQL 1453
Query: 4142 APIGTGDCALYLNDKMLEHAIDLQLPSYMEGLDFGMTPSRSPIMGTPYRDGMMSPNYMLS 4321
APIGTGDCALYLND+ML+HAI+LQLPSYMEGLDFGMTPSRSPI GTPY DGMMSPNY+LS
Sbjct: 1454 APIGTGDCALYLNDQMLQHAIELQLPSYMEGLDFGMTPSRSPITGTPYHDGMMSPNYLLS 1513
Query: 4322 PNLRLSPTNDAQFSPYVGGMAF 4387
PNLRLSP DAQFSPYVGGMAF
Sbjct: 1514 PNLRLSPITDAQFSPYVGGMAF 1535
>ref|XP_007203058.1| hypothetical protein PRUPE_ppa000093mg [Prunus persica]
gi|462398589|gb|EMJ04257.1| hypothetical protein
PRUPE_ppa000093mg [Prunus persica]
Length = 1844
Score = 2698 bits (6993), Expect = 0.0
Identities = 1326/1462 (90%), Positives = 1395/1462 (95%)
Frame = +2
Query: 2 AECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEDDHKFKLAQKVKNPKAR 181
AECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKIL DEDDHKFK A ++K+PK R
Sbjct: 74 AECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILVDEDDHKFKQALRIKSPKNR 133
Query: 182 LKRILDACKNKTKCEGGDEIEGQGRDSEEPVKKARGGCGAQQPKLTIEGMKMIAEYKLQR 361
LK+ILDACKNKTKC+GGDEI+ QG++SEEPVKK+RGGCGAQQPKL+IEGMKM AEYK QR
Sbjct: 134 LKKILDACKNKTKCDGGDEIDVQGQESEEPVKKSRGGCGAQQPKLSIEGMKMNAEYKAQR 193
Query: 362 KKSDDQEQLPEPVERKQQLSAERVLSVLKRISDEDCNLLGLNPKYARPDWMILQVLXXXX 541
KKSDDQEQLPEPVERKQ L+AERVLSVLKRISDED LLGLNPKYARPDWMILQVL
Sbjct: 194 KKSDDQEQLPEPVERKQTLTAERVLSVLKRISDEDSQLLGLNPKYARPDWMILQVLPIPP 253
Query: 542 XXXXXSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIISEFAQLLQFHVATY 721
SVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNG+PAHIISEFAQLLQFH+ATY
Sbjct: 254 QPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGSPAHIISEFAQLLQFHIATY 313
Query: 722 FDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDQ 901
FDNELPG PRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDP INIDQ
Sbjct: 314 FDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPNINIDQ 373
Query: 902 LGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIREDGQRLDLRYLKK 1081
LGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIR+DGQRLDLRYLKK
Sbjct: 374 LGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIRDDGQRLDLRYLKK 433
Query: 1082 SSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNA 1261
SSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNA
Sbjct: 434 SSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNA 493
Query: 1262 DFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKITKRDTF 1441
DFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDTLLGCRKITKRDTF
Sbjct: 494 DFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTF 553
Query: 1442 IEKDVFMNILMWWEDFDGKVPAPTILKPRPLWTGKQVFNLIIPKQINLMRTSAWHSESET 1621
IEKDVFMNILMWWEDFDGKVPAP ILKPRPLWTGKQVFNLIIPKQINL RTSAWHSE+E+
Sbjct: 554 IEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQINLQRTSAWHSEAES 613
Query: 1622 GFLTPGDTQVRIERGEVITGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNY 1801
G +TPGDT VRIE+GE++ GTLCKK LGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNY
Sbjct: 614 GNITPGDTFVRIEKGELLAGTLCKKALGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNY 673
Query: 1802 WLLQQAFSIGIGDTIADASTMEKINETISKAKNEVKELIRAAQEKQLEAEPGRTMMDSFE 1981
WLLQ AFSIGIGDTIADA+TMEKINETISKAKNEVK+LI AQ KQLEAEPGRTMMDSFE
Sbjct: 674 WLLQNAFSIGIGDTIADAATMEKINETISKAKNEVKDLISKAQSKQLEAEPGRTMMDSFE 733
Query: 1982 NRVNQVLNKARDDAGSSAQKSLAESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRI 2161
N+VNQVLN+ARDDAGSSAQKSL+ESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRI
Sbjct: 734 NKVNQVLNRARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRI 793
Query: 2162 PYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETG 2341
PYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETG
Sbjct: 794 PYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETG 853
Query: 2342 YIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQRLDSLKMKKGEFNK 2521
YIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ+LDSLKMKK EF+K
Sbjct: 854 YIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKSEFDK 913
Query: 2522 VYGYEFDDENWNPSYLLPEHVDDLQNIREFRNVFDAELKKLEEDRLQLGKDIVTTGDDVW 2701
+ YE DDENWNP Y+L EHV+DL+ IREFRNVFDAE++KLE DRLQLG +I TGD+ W
Sbjct: 914 TFSYELDDENWNPDYMLHEHVEDLKTIREFRNVFDAEVQKLETDRLQLGTEIAVTGDNSW 973
Query: 2702 PMPVNLKRLIWNAQKTFKIDLRRPSGMHPMEIVEAVDKLQERLKVVHGDDPMSTEAQKNA 2881
P+PVNLKRLIWNAQKTFKID RR S MHPMEIVEA+DKLQERLKVV GDD +S EAQKNA
Sbjct: 974 PLPVNLKRLIWNAQKTFKIDFRRTSDMHPMEIVEAIDKLQERLKVVPGDDLLSVEAQKNA 1033
Query: 2882 TLFFNILLRSTLASKRVLKEYRLTKEAFEWVVGEIESRFLQSLVASGEMIGCVAAQSIGE 3061
TLFF+ILLRST ASKRVL EYRLT+EAFEWV+GEIESRFLQSLVA GEMIGCVAAQSIGE
Sbjct: 1034 TLFFSILLRSTFASKRVLDEYRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGE 1093
Query: 3062 PATQMTLNTFHFAGVSAKNVTLGVPRLREIINIAKKIKTPSLSVYLKPEVNKTKERAKNV 3241
PATQMTLNTFH+AGVSAKNVTLGVPRLREIIN+AK+IKTPSLSVYLKPE NKTKERAKNV
Sbjct: 1094 PATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLKPEANKTKERAKNV 1153
Query: 3242 QCALEYTTLRSVTQATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEEISPDKISPWLLRVE 3421
QCALEYTTLRSVTQATEVWYDPDPMSTIIEED+DFV SYYEMPDEE++PDKISPWLLR+E
Sbjct: 1154 QCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVDFVNSYYEMPDEEVNPDKISPWLLRIE 1213
Query: 3422 LNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGELNDES 3601
LNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMN EAPKGEL DES
Sbjct: 1214 LNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNAEAPKGELVDES 1273
Query: 3602 AEDDVFLKKIESNMLTEMALRGIPDINKVFIKNWKRVRFDDDEGFMPEVEWMLDTEGVNL 3781
AEDDVFLKKIESNMLTEMALRGIPDINKVFIK+ K +FD +EGF E EWMLDTEGVNL
Sbjct: 1274 AEDDVFLKKIESNMLTEMALRGIPDINKVFIKHGKVNKFDPNEGFKAEQEWMLDTEGVNL 1333
Query: 3782 LAVICHEDVDATRTTSNHLIEVMEVLGIEAVRKSLLDELRVVISFDGSYVNYRHLAILCD 3961
LAV+CH+DVDA RTTSNHLIE++E+LGIEAVR+SLLDELRVVISFDGSYVNYRHLAILCD
Sbjct: 1334 LAVLCHDDVDARRTTSNHLIEILEILGIEAVRRSLLDELRVVISFDGSYVNYRHLAILCD 1393
Query: 3962 TMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDHLRGVTENIMLGQL 4141
TMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAV+AETD+LRGVTENIMLGQL
Sbjct: 1394 TMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETDYLRGVTENIMLGQL 1453
Query: 4142 APIGTGDCALYLNDKMLEHAIDLQLPSYMEGLDFGMTPSRSPIMGTPYRDGMMSPNYMLS 4321
APIGTGDCALYLND+ML++AI+LQLPSYM+GLDFGMTPSRSP+ GTPY +GMMSPNY+LS
Sbjct: 1454 APIGTGDCALYLNDEMLKNAIELQLPSYMDGLDFGMTPSRSPVSGTPYHEGMMSPNYLLS 1513
Query: 4322 PNLRLSPTNDAQFSPYVGGMAF 4387
PNLRLSP +DAQFSPYVGGMAF
Sbjct: 1514 PNLRLSPISDAQFSPYVGGMAF 1535
>ref|XP_004287766.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB1-like [Fragaria
vesca subsp. vesca]
Length = 1842
Score = 2695 bits (6986), Expect = 0.0
Identities = 1321/1462 (90%), Positives = 1394/1462 (95%)
Frame = +2
Query: 2 AECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEDDHKFKLAQKVKNPKAR 181
AECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKIL DEDDHKFK A ++KNPK R
Sbjct: 74 AECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILVDEDDHKFKTALRIKNPKNR 133
Query: 182 LKRILDACKNKTKCEGGDEIEGQGRDSEEPVKKARGGCGAQQPKLTIEGMKMIAEYKLQR 361
LK+ILDACKNKTKCEGGDEI+ Q D++EP+KK+RGGCGAQQPKLTI+GMKM+AEYK QR
Sbjct: 134 LKKILDACKNKTKCEGGDEIDVQ--DTDEPLKKSRGGCGAQQPKLTIDGMKMVAEYKAQR 191
Query: 362 KKSDDQEQLPEPVERKQQLSAERVLSVLKRISDEDCNLLGLNPKYARPDWMILQVLXXXX 541
KKSDDQEQLPEPVERKQ L+AERVLSVLKRISDEDC LLGLNPKYARPDWMILQVL
Sbjct: 192 KKSDDQEQLPEPVERKQTLTAERVLSVLKRISDEDCQLLGLNPKYARPDWMILQVLPIPP 251
Query: 542 XXXXXSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIISEFAQLLQFHVATY 721
SVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNG+PAHIISEFAQLLQFH+ATY
Sbjct: 252 QPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGSPAHIISEFAQLLQFHIATY 311
Query: 722 FDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDQ 901
FDNELPG PRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDP INIDQ
Sbjct: 312 FDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPNINIDQ 371
Query: 902 LGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIREDGQRLDLRYLKK 1081
LGVPWSIALNLTYPETVTPYNIERLKELVE GPHPPPGKTGAKYIIR+DGQRLDLRYLKK
Sbjct: 372 LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLKK 431
Query: 1082 SSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNA 1261
SSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNA
Sbjct: 432 SSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNA 491
Query: 1262 DFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKITKRDTF 1441
DFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDTLLGCRKITKRDTF
Sbjct: 492 DFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTF 551
Query: 1442 IEKDVFMNILMWWEDFDGKVPAPTILKPRPLWTGKQVFNLIIPKQINLMRTSAWHSESET 1621
IEKDVFMNILMWWEDFDGKVPAP ILKPRPLWTGKQVFNLIIPKQINL RTSAWHSESET
Sbjct: 552 IEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQINLQRTSAWHSESET 611
Query: 1622 GFLTPGDTQVRIERGEVITGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNY 1801
G +TPGDT VRIE+GE+++GTLCKK LGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNY
Sbjct: 612 GNITPGDTHVRIEKGELLSGTLCKKALGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNY 671
Query: 1802 WLLQQAFSIGIGDTIADASTMEKINETISKAKNEVKELIRAAQEKQLEAEPGRTMMDSFE 1981
WLLQ AFSIGIGDTIADA+TMEKINETISKAKNEVKELI AQ K LE EPGRTMMDSFE
Sbjct: 672 WLLQNAFSIGIGDTIADAATMEKINETISKAKNEVKELISKAQSKSLEPEPGRTMMDSFE 731
Query: 1982 NRVNQVLNKARDDAGSSAQKSLAESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRI 2161
N+VNQVLN+ARDDAGSSAQKSL+ESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRI
Sbjct: 732 NKVNQVLNRARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRI 791
Query: 2162 PYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETG 2341
PYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETG
Sbjct: 792 PYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETG 851
Query: 2342 YIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQRLDSLKMKKGEFNK 2521
YIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ+LDSLKMKK EF+K
Sbjct: 852 YIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKKEFDK 911
Query: 2522 VYGYEFDDENWNPSYLLPEHVDDLQNIREFRNVFDAELKKLEEDRLQLGKDIVTTGDDVW 2701
+ Y FDDENWNP Y+LPEHV+DL+ IREFRNVFDAE+ KLE DRLQLG +I TGD+ W
Sbjct: 912 TFAYVFDDENWNPDYMLPEHVEDLKTIREFRNVFDAEVSKLETDRLQLGTEIAVTGDNSW 971
Query: 2702 PMPVNLKRLIWNAQKTFKIDLRRPSGMHPMEIVEAVDKLQERLKVVHGDDPMSTEAQKNA 2881
P+PVNLKRLIWNAQKTFKID RR S MHPMEIVEA+DKLQERL+VV GDD +S EAQKNA
Sbjct: 972 PLPVNLKRLIWNAQKTFKIDFRRTSDMHPMEIVEAIDKLQERLRVVPGDDLLSVEAQKNA 1031
Query: 2882 TLFFNILLRSTLASKRVLKEYRLTKEAFEWVVGEIESRFLQSLVASGEMIGCVAAQSIGE 3061
TLFFNILLRST ASKRVL+EYRLT+EAFEWV+GEIESRFLQSLVA GEMIGCVAAQSIGE
Sbjct: 1032 TLFFNILLRSTFASKRVLEEYRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGE 1091
Query: 3062 PATQMTLNTFHFAGVSAKNVTLGVPRLREIINIAKKIKTPSLSVYLKPEVNKTKERAKNV 3241
PATQMTLNTFH+AGVSAKNVTLGVPRLREIIN+AK+IKTPSLSVYLKPE NKTKERAKNV
Sbjct: 1092 PATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLKPEANKTKERAKNV 1151
Query: 3242 QCALEYTTLRSVTQATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEEISPDKISPWLLRVE 3421
QCALEYTTLRSVTQATEVWYDPDPMST+IEED+DFV+SYYEMPDEE++PDKISPWLLR+E
Sbjct: 1152 QCALEYTTLRSVTQATEVWYDPDPMSTLIEEDLDFVRSYYEMPDEEVNPDKISPWLLRIE 1211
Query: 3422 LNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGELNDES 3601
LNREMMVDKKLSMADIAEKINLEFD DLTCIFNDDNAEKLILRIRIMN+E PKG+ DES
Sbjct: 1212 LNREMMVDKKLSMADIAEKINLEFDGDLTCIFNDDNAEKLILRIRIMNEETPKGDSQDES 1271
Query: 3602 AEDDVFLKKIESNMLTEMALRGIPDINKVFIKNWKRVRFDDDEGFMPEVEWMLDTEGVNL 3781
AEDDVFLKKIESNMLTEMALRGIPDINKVFIK+ K +FD +EGF E EWMLDTEGVNL
Sbjct: 1272 AEDDVFLKKIESNMLTEMALRGIPDINKVFIKHGKVNKFDQNEGFKAEQEWMLDTEGVNL 1331
Query: 3782 LAVICHEDVDATRTTSNHLIEVMEVLGIEAVRKSLLDELRVVISFDGSYVNYRHLAILCD 3961
LAV+CH+DVDA RTTSNHLIE++EVLGIEAVR+SLLDELRVVISFDGSYVNYRHLAILCD
Sbjct: 1332 LAVLCHDDVDAKRTTSNHLIEIIEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAILCD 1391
Query: 3962 TMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDHLRGVTENIMLGQL 4141
TMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDA+V+AETDHLRGVTENIMLGQL
Sbjct: 1392 TMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDASVFAETDHLRGVTENIMLGQL 1451
Query: 4142 APIGTGDCALYLNDKMLEHAIDLQLPSYMEGLDFGMTPSRSPIMGTPYRDGMMSPNYMLS 4321
APIGTGDCALYLND+ML++AI+LQLPSY++GLDFGMTPSRSP+ GTP+RDGMMSPNY+LS
Sbjct: 1452 APIGTGDCALYLNDEMLKNAIELQLPSYVDGLDFGMTPSRSPVSGTPFRDGMMSPNYLLS 1511
Query: 4322 PNLRLSPTNDAQFSPYVGGMAF 4387
PN+R+SP +DAQFSPYVGGMAF
Sbjct: 1512 PNMRMSPISDAQFSPYVGGMAF 1533
>ref|XP_006828844.1| hypothetical protein AMTR_s00001p00152770 [Amborella trichopoda]
gi|548833823|gb|ERM96260.1| hypothetical protein
AMTR_s00001p00152770 [Amborella trichopoda]
Length = 1844
Score = 2685 bits (6961), Expect = 0.0
Identities = 1321/1465 (90%), Positives = 1404/1465 (95%), Gaps = 3/1465 (0%)
Frame = +2
Query: 2 AECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEDDHKFKLAQKVKNPKAR 181
AECPGHFGHLELAKPMFHIGF+KTVLSIMRCVCFNCS+ILADE+DH+FK A K++NPK R
Sbjct: 74 AECPGHFGHLELAKPMFHIGFLKTVLSIMRCVCFNCSRILADEEDHRFKQALKIRNPKTR 133
Query: 182 LKRILDACKNKTKCEGGDEI-EGQGRDSEEPVKKAR-GGCGAQQPKLTIEGMKMIAEYKL 355
LK++LD CKNKTKCEGGD+I E Q +DSEE VKK R GGCGAQQPK+TIEGMKM+AEYKL
Sbjct: 134 LKKVLDCCKNKTKCEGGDDIDEDQAQDSEEVVKKKRHGGCGAQQPKITIEGMKMVAEYKL 193
Query: 356 QRKKSDDQEQ-LPEPVERKQQLSAERVLSVLKRISDEDCNLLGLNPKYARPDWMILQVLX 532
RKK+D+QEQ LPEPVERKQQL+AE+VL+VLKRI+DEDC LLGLNPKYARPDWMILQV+
Sbjct: 194 PRKKNDEQEQMLPEPVERKQQLAAEKVLNVLKRITDEDCQLLGLNPKYARPDWMILQVMP 253
Query: 533 XXXXXXXXSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIISEFAQLLQFHV 712
SVMMDTSSRSEDDLTHQLAM+IRHNENL+RQE+NGAPAHIISEFAQLLQFHV
Sbjct: 254 IPPPPVRPSVMMDTSSRSEDDLTHQLAMVIRHNENLKRQEKNGAPAHIISEFAQLLQFHV 313
Query: 713 ATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTIN 892
ATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTIN
Sbjct: 314 ATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTIN 373
Query: 893 IDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIREDGQRLDLRY 1072
ID+LGVPWSIALNLTYPETVTPYNIERLKELVE GPHPPPGKTGAKYIIREDGQRLDLRY
Sbjct: 374 IDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIREDGQRLDLRY 433
Query: 1073 LKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSP 1252
LKKS DHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSP
Sbjct: 434 LKKSGDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSP 493
Query: 1253 YNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKITKR 1432
YNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDTLLGCRKITKR
Sbjct: 494 YNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKR 553
Query: 1433 DTFIEKDVFMNILMWWEDFDGKVPAPTILKPRPLWTGKQVFNLIIPKQINLMRTSAWHSE 1612
DTFIEKDVFMNILMWWEDFDGK+PAP ILKPRPLWTGKQVFNLIIPKQINL+R SAWHSE
Sbjct: 554 DTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQINLIRYSAWHSE 613
Query: 1613 SETGFLTPGDTQVRIERGEVITGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWL 1792
SE+GF+TPGDT VRIERGE+++GTLCKKTLGTS+GSLIHVIWEEVGPDAARKFLGHTQWL
Sbjct: 614 SESGFITPGDTCVRIERGELLSGTLCKKTLGTSSGSLIHVIWEEVGPDAARKFLGHTQWL 673
Query: 1793 VNYWLLQQAFSIGIGDTIADASTMEKINETISKAKNEVKELIRAAQEKQLEAEPGRTMMD 1972
VNYWLLQQAFSIGIGDTIADA+TMEKINETISKAKNEVKELI+AAQEKQLEAEPGRTMM+
Sbjct: 674 VNYWLLQQAFSIGIGDTIADAATMEKINETISKAKNEVKELIKAAQEKQLEAEPGRTMME 733
Query: 1973 SFENRVNQVLNKARDDAGSSAQKSLAESNNLKAMVTAGSKGSFINISQMTACVGQQNVEG 2152
SFENRVNQVLNKARDDAGSSAQKSL+ESNNLKAMVTAGSKGSFINISQMTACVGQQNVEG
Sbjct: 734 SFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEG 793
Query: 2153 KRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTS 2332
KRIP+GF DRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTS
Sbjct: 794 KRIPFGFNDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTS 853
Query: 2333 ETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQRLDSLKMKKGE 2512
ETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ+LDSLKMK+ E
Sbjct: 854 ETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKRAE 913
Query: 2513 FNKVYGYEFDDENWNPSYLLPEHVDDLQNIREFRNVFDAELKKLEEDRLQLGKDIVTTGD 2692
F VY YE D ENW+PSY+LPEHV+DL+ IREF+NVFDAE++KLE DR QLG +I TTGD
Sbjct: 914 FENVYKYEIDQENWSPSYMLPEHVEDLKTIREFQNVFDAEVQKLEADRHQLGTEITTTGD 973
Query: 2693 DVWPMPVNLKRLIWNAQKTFKIDLRRPSGMHPMEIVEAVDKLQERLKVVHGDDPMSTEAQ 2872
+ WPMPVNLKRLIWNAQK FK+DLRRPS MHPMEIVEAVDKLQERLKVV GDD MS EAQ
Sbjct: 974 NSWPMPVNLKRLIWNAQKMFKVDLRRPSDMHPMEIVEAVDKLQERLKVVPGDDLMSIEAQ 1033
Query: 2873 KNATLFFNILLRSTLASKRVLKEYRLTKEAFEWVVGEIESRFLQSLVASGEMIGCVAAQS 3052
KNATLFFNILLRST ASKRVLKEYRLT+EAF+WV+GEIESRFLQSLVA GEMIGCVAAQS
Sbjct: 1034 KNATLFFNILLRSTFASKRVLKEYRLTREAFDWVIGEIESRFLQSLVAPGEMIGCVAAQS 1093
Query: 3053 IGEPATQMTLNTFHFAGVSAKNVTLGVPRLREIINIAKKIKTPSLSVYLKPEVNKTKERA 3232
IGEPATQMTLNTFH+AGVSAKNVTLGVPRLREIIN+AKKIKTPSLSVYLK EVNKTKE+A
Sbjct: 1094 IGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKHEVNKTKEKA 1153
Query: 3233 KNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEEISPDKISPWLL 3412
KNVQCALEYTTLRSVT+ATEVWYDPDPMSTIIEED+DFV+SYYEMPDEE++P+KISPWLL
Sbjct: 1154 KNVQCALEYTTLRSVTEATEVWYDPDPMSTIIEEDVDFVRSYYEMPDEEVAPEKISPWLL 1213
Query: 3413 RVELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGELN 3592
R+ELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGEL
Sbjct: 1214 RIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGELQ 1273
Query: 3593 DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNWKRVRFDDDEGFMPEVEWMLDTEG 3772
DES+EDDVFLKKIESNMLTEMALRGIPDINKVFIK+ K +FD++EGF PE+EWMLDTEG
Sbjct: 1274 DESSEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKINKFDENEGFKPEIEWMLDTEG 1333
Query: 3773 VNLLAVICHEDVDATRTTSNHLIEVMEVLGIEAVRKSLLDELRVVISFDGSYVNYRHLAI 3952
VNLLAV+C+E+VDATRTTSNHLIEV++VLGIEAVR++LLDELRVVISFDGSYVNYRHLAI
Sbjct: 1334 VNLLAVMCNEEVDATRTTSNHLIEVIQVLGIEAVRRALLDELRVVISFDGSYVNYRHLAI 1393
Query: 3953 LCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDHLRGVTENIML 4132
LCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAE DHLRGVTENIML
Sbjct: 1394 LCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAEADHLRGVTENIML 1453
Query: 4133 GQLAPIGTGDCALYLNDKMLEHAIDLQLPSYMEGLDFGMTPSRSPIMGTPYRDGMMSPNY 4312
GQLAPIGTGDCALYLND+ML+ AI+LQLPSYMEG+DFGMTPSRSP+ GTPY +GMMSP Y
Sbjct: 1454 GQLAPIGTGDCALYLNDQMLQQAIELQLPSYMEGMDFGMTPSRSPMTGTPYHEGMMSP-Y 1512
Query: 4313 MLSPNLRLSPTNDAQFSPYVGGMAF 4387
+LSPN+R SP DAQFSPYVGGMAF
Sbjct: 1513 LLSPNMRSSPITDAQFSPYVGGMAF 1537
>ref|XP_004169177.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB1-like [Cucumis
sativus]
Length = 1853
Score = 2675 bits (6935), Expect = 0.0
Identities = 1314/1462 (89%), Positives = 1392/1462 (95%)
Frame = +2
Query: 2 AECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEDDHKFKLAQKVKNPKAR 181
AECPGHFGHLELAKPMFHIGFMKTVL+IMR VCFNCSKIL DE+D KFK A ++KNPK R
Sbjct: 74 AECPGHFGHLELAKPMFHIGFMKTVLTIMRSVCFNCSKILVDEEDPKFKQALRIKNPKNR 133
Query: 182 LKRILDACKNKTKCEGGDEIEGQGRDSEEPVKKARGGCGAQQPKLTIEGMKMIAEYKLQR 361
L++ILDACKNKTKCEGGDEI+ QG+DS++PVKK+RGGCGAQQPK++IEGMKM AEYK QR
Sbjct: 134 LRKILDACKNKTKCEGGDEIDVQGQDSDQPVKKSRGGCGAQQPKISIEGMKMTAEYKAQR 193
Query: 362 KKSDDQEQLPEPVERKQQLSAERVLSVLKRISDEDCNLLGLNPKYARPDWMILQVLXXXX 541
KK+DD EQLPEPVERKQ L+AERVL +LKRI+DEDC LLGLNPKYARPDWMILQVL
Sbjct: 194 KKNDDPEQLPEPVERKQTLTAERVLGILKRITDEDCKLLGLNPKYARPDWMILQVLPIPP 253
Query: 542 XXXXXSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIISEFAQLLQFHVATY 721
SVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNG+PAHIISEFAQLLQFH+ATY
Sbjct: 254 PPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGSPAHIISEFAQLLQFHIATY 313
Query: 722 FDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDQ 901
FDNELPG PRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINID+
Sbjct: 314 FDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDE 373
Query: 902 LGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIREDGQRLDLRYLKK 1081
LGVPWSIALNLTYPETVTPYNIERLKELVE GPHPPPGKTGAKYIIR+DGQRLDLRYLKK
Sbjct: 374 LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLKK 433
Query: 1082 SSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNA 1261
SSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNA
Sbjct: 434 SSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNA 493
Query: 1262 DFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKITKRDTF 1441
DFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDTLLGCRKITKRDTF
Sbjct: 494 DFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTF 553
Query: 1442 IEKDVFMNILMWWEDFDGKVPAPTILKPRPLWTGKQVFNLIIPKQINLMRTSAWHSESET 1621
I KDVFMN LMWWEDFDGK+PAP ILKP+PLWTGKQVFNLIIPKQINL RTSAWHSESET
Sbjct: 554 ITKDVFMNTLMWWEDFDGKIPAPAILKPQPLWTGKQVFNLIIPKQINLTRTSAWHSESET 613
Query: 1622 GFLTPGDTQVRIERGEVITGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNY 1801
G +TPGDT VRIE+GE+++GTLCKK LGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNY
Sbjct: 614 GHITPGDTFVRIEKGELLSGTLCKKALGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNY 673
Query: 1802 WLLQQAFSIGIGDTIADASTMEKINETISKAKNEVKELIRAAQEKQLEAEPGRTMMDSFE 1981
WLLQ AFSIGIGDTIADA+TMEKINETIS AKNEVK LI+ AQE+ LE EPGRTMMDSFE
Sbjct: 674 WLLQNAFSIGIGDTIADAATMEKINETISAAKNEVKNLIKKAQERSLEPEPGRTMMDSFE 733
Query: 1982 NRVNQVLNKARDDAGSSAQKSLAESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRI 2161
N+VNQVLNKARDDAGSSAQKSL+ESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRI
Sbjct: 734 NKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRI 793
Query: 2162 PYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETG 2341
P+GFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETG
Sbjct: 794 PFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETG 853
Query: 2342 YIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQRLDSLKMKKGEFNK 2521
YIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ+LDSLKMKK EF +
Sbjct: 854 YIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKKEFER 913
Query: 2522 VYGYEFDDENWNPSYLLPEHVDDLQNIREFRNVFDAELKKLEEDRLQLGKDIVTTGDDVW 2701
++ YEF+DENW P+Y+LPEHV+DL+ IREFRNVF+AE++KLE DR QLG +I TTG++ W
Sbjct: 914 IFRYEFEDENWKPNYMLPEHVEDLKTIREFRNVFEAEVQKLEADRYQLGTEIATTGENSW 973
Query: 2702 PMPVNLKRLIWNAQKTFKIDLRRPSGMHPMEIVEAVDKLQERLKVVHGDDPMSTEAQKNA 2881
PMPVNLKRLI NAQKTFKID RR S MHPMEIVEA+DKLQERLKVV G+DP+S EAQKNA
Sbjct: 974 PMPVNLKRLIQNAQKTFKIDFRRASDMHPMEIVEAIDKLQERLKVVPGEDPLSVEAQKNA 1033
Query: 2882 TLFFNILLRSTLASKRVLKEYRLTKEAFEWVVGEIESRFLQSLVASGEMIGCVAAQSIGE 3061
TLFFNILLRST ASKRVL EYRLT+EAFEWV+GEIESRFLQSLVA GEMIGCVAAQSIGE
Sbjct: 1034 TLFFNILLRSTFASKRVLDEYRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGE 1093
Query: 3062 PATQMTLNTFHFAGVSAKNVTLGVPRLREIINIAKKIKTPSLSVYLKPEVNKTKERAKNV 3241
PATQMTLNTFH+AGVSAKNVTLGVPRLREIIN+AK+IKTPSLSVYLKPE NKTKERAK V
Sbjct: 1094 PATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLKPEANKTKERAKTV 1153
Query: 3242 QCALEYTTLRSVTQATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEEISPDKISPWLLRVE 3421
QCALEYTTLRSVTQATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEEI+P+KISPWLLR+E
Sbjct: 1154 QCALEYTTLRSVTQATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEEIAPEKISPWLLRIE 1213
Query: 3422 LNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGELNDES 3601
LNREMMVDKKLSMA+IAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGEL DES
Sbjct: 1214 LNREMMVDKKLSMANIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGELTDES 1273
Query: 3602 AEDDVFLKKIESNMLTEMALRGIPDINKVFIKNWKRVRFDDDEGFMPEVEWMLDTEGVNL 3781
AEDDVFLKKIESNMLTEMALRGIPDINKVFIK K +FD++EGF PE+EWMLDTEGVNL
Sbjct: 1274 AEDDVFLKKIESNMLTEMALRGIPDINKVFIKCGKVNKFDENEGFKPEMEWMLDTEGVNL 1333
Query: 3782 LAVICHEDVDATRTTSNHLIEVMEVLGIEAVRKSLLDELRVVISFDGSYVNYRHLAILCD 3961
LAV+ HEDVDA RTTSNHLIEV+EVLGIEAVR+SLLDELRVVISFDGSYVNYRHLAILCD
Sbjct: 1334 LAVMTHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAILCD 1393
Query: 3962 TMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDHLRGVTENIMLGQL 4141
TMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDHLRGVTENIMLGQL
Sbjct: 1394 TMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDHLRGVTENIMLGQL 1453
Query: 4142 APIGTGDCALYLNDKMLEHAIDLQLPSYMEGLDFGMTPSRSPIMGTPYRDGMMSPNYMLS 4321
APIGTG CALYLND+ML++AI+LQLPSY++GLDFGMTPSRSPI GTPY +GMMSPNY+LS
Sbjct: 1454 APIGTGGCALYLNDEMLKNAIELQLPSYIDGLDFGMTPSRSPISGTPYHEGMMSPNYLLS 1513
Query: 4322 PNLRLSPTNDAQFSPYVGGMAF 4387
PNLRLSP +DAQFSPYVGGMAF
Sbjct: 1514 PNLRLSPISDAQFSPYVGGMAF 1535
>ref|XP_004146161.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase II
subunit RPB1-like [Cucumis sativus]
Length = 1832
Score = 2675 bits (6935), Expect = 0.0
Identities = 1314/1462 (89%), Positives = 1392/1462 (95%)
Frame = +2
Query: 2 AECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEDDHKFKLAQKVKNPKAR 181
AECPGHFGHLELAKPMFHIGFMKTVL+IMR VCFNCSKIL DE+D KFK A ++KNPK R
Sbjct: 74 AECPGHFGHLELAKPMFHIGFMKTVLTIMRSVCFNCSKILVDEEDPKFKQALRIKNPKNR 133
Query: 182 LKRILDACKNKTKCEGGDEIEGQGRDSEEPVKKARGGCGAQQPKLTIEGMKMIAEYKLQR 361
L++ILDACKNKTKCEGGDEI+ QG+DS++PVKK+RGGCGAQQPK++IEGMKM AEYK QR
Sbjct: 134 LRKILDACKNKTKCEGGDEIDVQGQDSDQPVKKSRGGCGAQQPKISIEGMKMTAEYKAQR 193
Query: 362 KKSDDQEQLPEPVERKQQLSAERVLSVLKRISDEDCNLLGLNPKYARPDWMILQVLXXXX 541
KK+DD EQLPEPVERKQ L+AERVL +LKRI+DEDC LLGLNPKYARPDWMILQVL
Sbjct: 194 KKNDDPEQLPEPVERKQTLTAERVLGILKRITDEDCKLLGLNPKYARPDWMILQVLPIPP 253
Query: 542 XXXXXSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIISEFAQLLQFHVATY 721
SVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNG+PAHIISEFAQLLQFH+ATY
Sbjct: 254 PPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGSPAHIISEFAQLLQFHIATY 313
Query: 722 FDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDQ 901
FDNELPG PRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINID+
Sbjct: 314 FDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDE 373
Query: 902 LGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIREDGQRLDLRYLKK 1081
LGVPWSIALNLTYPETVTPYNIERLKELVE GPHPPPGKTGAKYIIR+DGQRLDLRYLKK
Sbjct: 374 LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLKK 433
Query: 1082 SSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNA 1261
SSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNA
Sbjct: 434 SSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNA 493
Query: 1262 DFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKITKRDTF 1441
DFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDTLLGCRKITKRDTF
Sbjct: 494 DFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTF 553
Query: 1442 IEKDVFMNILMWWEDFDGKVPAPTILKPRPLWTGKQVFNLIIPKQINLMRTSAWHSESET 1621
I KDVFMN LMWWEDFDGK+PAP ILKP+PLWTGKQVFNLIIPKQINL RTSAWHSESET
Sbjct: 554 ITKDVFMNTLMWWEDFDGKIPAPAILKPQPLWTGKQVFNLIIPKQINLTRTSAWHSESET 613
Query: 1622 GFLTPGDTQVRIERGEVITGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNY 1801
G +TPGDT VRIE+GE+++GTLCKK LGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNY
Sbjct: 614 GHITPGDTFVRIEKGELLSGTLCKKALGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNY 673
Query: 1802 WLLQQAFSIGIGDTIADASTMEKINETISKAKNEVKELIRAAQEKQLEAEPGRTMMDSFE 1981
WLLQ AFSIGIGDTIADA+TMEKINETIS AKNEVK LI+ AQE+ LE EPGRTMMDSFE
Sbjct: 674 WLLQNAFSIGIGDTIADAATMEKINETISAAKNEVKNLIKKAQERSLEPEPGRTMMDSFE 733
Query: 1982 NRVNQVLNKARDDAGSSAQKSLAESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRI 2161
N+VNQVLNKARDDAGSSAQKSL+ESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRI
Sbjct: 734 NKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRI 793
Query: 2162 PYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETG 2341
P+GFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETG
Sbjct: 794 PFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETG 853
Query: 2342 YIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQRLDSLKMKKGEFNK 2521
YIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ+LDSLKMKK EF +
Sbjct: 854 YIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKKEFER 913
Query: 2522 VYGYEFDDENWNPSYLLPEHVDDLQNIREFRNVFDAELKKLEEDRLQLGKDIVTTGDDVW 2701
++ YEF+DENW P+Y+LPEHV+DL+ IREFRNVF+AE++KLE DR QLG +I TTG++ W
Sbjct: 914 IFRYEFEDENWKPNYMLPEHVEDLKTIREFRNVFEAEVQKLEADRYQLGTEIATTGENSW 973
Query: 2702 PMPVNLKRLIWNAQKTFKIDLRRPSGMHPMEIVEAVDKLQERLKVVHGDDPMSTEAQKNA 2881
PMPVNLKRLI NAQKTFKID RR S MHPMEIVEA+DKLQERLKVV G+DP+S EAQKNA
Sbjct: 974 PMPVNLKRLIQNAQKTFKIDFRRASDMHPMEIVEAIDKLQERLKVVPGEDPLSVEAQKNA 1033
Query: 2882 TLFFNILLRSTLASKRVLKEYRLTKEAFEWVVGEIESRFLQSLVASGEMIGCVAAQSIGE 3061
TLFFNILLRST ASKRVL EYRLT+EAFEWV+GEIESRFLQSLVA GEMIGCVAAQSIGE
Sbjct: 1034 TLFFNILLRSTFASKRVLDEYRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGE 1093
Query: 3062 PATQMTLNTFHFAGVSAKNVTLGVPRLREIINIAKKIKTPSLSVYLKPEVNKTKERAKNV 3241
PATQMTLNTFH+AGVSAKNVTLGVPRLREIIN+AK+IKTPSLSVYLKPE NKTKERAK V
Sbjct: 1094 PATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLKPEANKTKERAKTV 1153
Query: 3242 QCALEYTTLRSVTQATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEEISPDKISPWLLRVE 3421
QCALEYTTLRSVTQATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEEI+P+KISPWLLR+E
Sbjct: 1154 QCALEYTTLRSVTQATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEEIAPEKISPWLLRIE 1213
Query: 3422 LNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGELNDES 3601
LNREMMVDKKLSMA+IAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGEL DES
Sbjct: 1214 LNREMMVDKKLSMANIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGELTDES 1273
Query: 3602 AEDDVFLKKIESNMLTEMALRGIPDINKVFIKNWKRVRFDDDEGFMPEVEWMLDTEGVNL 3781
AEDDVFLKKIESNMLTEMALRGIPDINKVFIK K +FD++EGF PE+EWMLDTEGVNL
Sbjct: 1274 AEDDVFLKKIESNMLTEMALRGIPDINKVFIKCGKVNKFDENEGFKPEMEWMLDTEGVNL 1333
Query: 3782 LAVICHEDVDATRTTSNHLIEVMEVLGIEAVRKSLLDELRVVISFDGSYVNYRHLAILCD 3961
LAV+ HEDVDA RTTSNHLIEV+EVLGIEAVR+SLLDELRVVISFDGSYVNYRHLAILCD
Sbjct: 1334 LAVMTHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAILCD 1393
Query: 3962 TMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDHLRGVTENIMLGQL 4141
TMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDHLRGVTENIMLGQL
Sbjct: 1394 TMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDHLRGVTENIMLGQL 1453
Query: 4142 APIGTGDCALYLNDKMLEHAIDLQLPSYMEGLDFGMTPSRSPIMGTPYRDGMMSPNYMLS 4321
APIGTG CALYLND+ML++AI+LQLPSY++GLDFGMTPSRSPI GTPY +GMMSPNY+LS
Sbjct: 1454 APIGTGGCALYLNDEMLKNAIELQLPSYIDGLDFGMTPSRSPISGTPYHEGMMSPNYLLS 1513
Query: 4322 PNLRLSPTNDAQFSPYVGGMAF 4387
PNLRLSP +DAQFSPYVGGMAF
Sbjct: 1514 PNLRLSPISDAQFSPYVGGMAF 1535
>ref|XP_006383037.1| DNA-directed RNA polymerase II largest subunit family protein
[Populus trichocarpa] gi|550338614|gb|ERP60834.1|
DNA-directed RNA polymerase II largest subunit family
protein [Populus trichocarpa]
Length = 1837
Score = 2674 bits (6932), Expect = 0.0
Identities = 1320/1465 (90%), Positives = 1400/1465 (95%), Gaps = 3/1465 (0%)
Frame = +2
Query: 2 AECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEDDHKFKLAQKVKNPKAR 181
AECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADE+DHKFK A K+KNPK+R
Sbjct: 74 AECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEEDHKFKQALKIKNPKSR 133
Query: 182 LKRILDACKNKTKCEGGDEIEGQGRDSEEPVKKARGGCGAQQPKLTIEGMKMIAEYKLQR 361
LK+ILDACKNKTKCEGGDEI+ QG+D+EEPVKK+RGGCGAQQPKLTIEGMKMIAEYK+QR
Sbjct: 134 LKKILDACKNKTKCEGGDEIDVQGQDNEEPVKKSRGGCGAQQPKLTIEGMKMIAEYKVQR 193
Query: 362 KKSDDQEQLPEPVERKQQLSAERVLSVLKRISDEDCNLLGLNPKYARPDWMILQVLXXXX 541
KKSDDQEQLPEPVERKQ L+AERVLSVLKRISDEDC LLGL+PKYARPDWMILQVL
Sbjct: 194 KKSDDQEQLPEPVERKQTLTAERVLSVLKRISDEDCQLLGLDPKYARPDWMILQVLPIPP 253
Query: 542 XXXXXSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIISEFAQLLQFHVATY 721
SVMMDTSSRSEDDLTHQLAMIIRHNENLRRQER+GAPAHIISEFAQLLQFHVATY
Sbjct: 254 PPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERSGAPAHIISEFAQLLQFHVATY 313
Query: 722 FDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDQ 901
FDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINID+
Sbjct: 314 FDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDE 373
Query: 902 LGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIREDGQRLDLRYLKK 1081
LGVPWSIALNLTYPETVTPYNIERLKELVE GPHPPPGKTGAKYIIR+DGQRLDLRYLKK
Sbjct: 374 LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLKK 433
Query: 1082 SSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNA 1261
SSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNA
Sbjct: 434 SSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNA 493
Query: 1262 DFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKITKRDTF 1441
DFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDTLLGCRKITKRDTF
Sbjct: 494 DFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTF 553
Query: 1442 IEKDVFMNILMWWEDFDGKVPAPTILKPRPLWTGKQVFNLIIPKQINLMRTSAWHSESET 1621
IEKDVFMNILMWWEDFDGKVPAPTI+KPRPLWTGKQVFNLIIPKQINL+RT+AWH +SE
Sbjct: 554 IEKDVFMNILMWWEDFDGKVPAPTIVKPRPLWTGKQVFNLIIPKQINLIRTAAWHMDSER 613
Query: 1622 GFLTPGDTQVRIERGEVITGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNY 1801
G +TPGDT VRIE+GE+++GTLCKKTLGTS+GSLIHVIWEEVGPDAARKFLGHTQWLVNY
Sbjct: 614 GMITPGDTLVRIEKGELLSGTLCKKTLGTSSGSLIHVIWEEVGPDAARKFLGHTQWLVNY 673
Query: 1802 WLLQQAFSIGIGDTIADASTMEKINETISKAKNEVKELIRAAQEKQLEAEPGRTMMDSFE 1981
WLLQ AFSIGIGDTIADASTMEKINETIS AKNEVK+LIR AQ K+LEAEPGRTMM+SFE
Sbjct: 674 WLLQNAFSIGIGDTIADASTMEKINETISNAKNEVKDLIRKAQNKELEAEPGRTMMESFE 733
Query: 1982 NRVNQVLNKARDDAGSSAQKSLAESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRI 2161
NRVNQVLNKARDDAGSSAQKSL+ESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRI
Sbjct: 734 NRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRI 793
Query: 2162 PYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETG 2341
PYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETG
Sbjct: 794 PYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETG 853
Query: 2342 YIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQRLDSLKMKKGEFNK 2521
YIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIESQ+LDSLKMKK EF++
Sbjct: 854 YIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQKLDSLKMKKAEFDR 913
Query: 2522 VYGYEFDDENWNPSYLLPEHVDDLQNIREFRNVFDAELKKLEEDRLQLGKDIVTTGDDVW 2701
V+ YEFDDE+WNP+Y++ +HV+DL+NIRE R+VFDAE++KLE DR QLG +I TTGD+ W
Sbjct: 914 VFRYEFDDEDWNPTYMMTDHVEDLRNIRELRDVFDAEVQKLEADRYQLGTEIATTGDNTW 973
Query: 2702 PMPVNLKRLIWNAQKTFKIDLR--RPSGMHPMEIVEAVDKLQERLKVVHGDDPMSTEAQK 2875
PMPVNLKRLIWNAQKTFKID R R S +HPME VEAVDKLQERLKVV GDD +S EAQK
Sbjct: 974 PMPVNLKRLIWNAQKTFKIDTRIGRVSDIHPMEAVEAVDKLQERLKVVPGDDLLSVEAQK 1033
Query: 2876 NATLFFNILLRSTLASKRVLKEYRLTKEAFEWVVGEIESRFLQSLVASGEMIGCVAAQSI 3055
NATLFF ILLRSTLASKRVL+EYRL++EAF+WV+GEIESRFLQSLVA GEMIGCVAAQSI
Sbjct: 1034 NATLFFGILLRSTLASKRVLQEYRLSREAFDWVIGEIESRFLQSLVAPGEMIGCVAAQSI 1093
Query: 3056 GEPATQMTLNTFHFAGVSAKNVTLGVPRLREIINIAKKIKTPSLSVYLKPEVNKTKERAK 3235
GEPATQMTLNTFH+AGVSAKNVTLGVPRLREIIN+AKKIKTPSLSVYLKPE NKTKE+AK
Sbjct: 1094 GEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKPEFNKTKEKAK 1153
Query: 3236 NVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEEISPDKISPWLLR 3415
NVQCALEYTTLRSVTQATEVWYDPDPMSTIIEED DFVKSYYEMPDEE++P+KISPWLLR
Sbjct: 1154 NVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDADFVKSYYEMPDEEVAPEKISPWLLR 1213
Query: 3416 VELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGELND 3595
+ELNREMM+DKKL+MADIAEKIN EFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGELND
Sbjct: 1214 IELNREMMIDKKLNMADIAEKINHEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGELND 1273
Query: 3596 ESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNWKRVRFDDDEGFMPEVEWMLDTEGV 3775
ESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKN K FD+ EGF EWMLDTEGV
Sbjct: 1274 ESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNAKVSSFDESEGFKTTEEWMLDTEGV 1333
Query: 3776 NLLAVICHEDVDATRTTSNHLIEVMEVLGIEAVRKSLLDELRVVISFDGSYVNYRHLAIL 3955
NLLAV+C+E+VDA +TTSNHLIEV+EV+GIEAVR+SLLDELRVVISFDGSYVNYRHLAIL
Sbjct: 1334 NLLAVMCNENVDARKTTSNHLIEVIEVIGIEAVRRSLLDELRVVISFDGSYVNYRHLAIL 1393
Query: 3956 CDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDHLRGVTENIMLG 4135
CDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETD+LRGVTENIMLG
Sbjct: 1394 CDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDYLRGVTENIMLG 1453
Query: 4136 QLAPIGTGDCALYLNDKMLEHAIDLQLPSYMEGLDFGMTPSRSPIMGTPYRDGMMSPNYM 4315
QLAPIGTG CALYLND+ML++AI+LQLPSYMEGLDFGMTP+RSP+ GTPY DGMMSP +
Sbjct: 1454 QLAPIGTGYCALYLNDEMLKNAIELQLPSYMEGLDFGMTPARSPVSGTPYHDGMMSP-ML 1512
Query: 4316 LSPNLRLSPTND-AQFSPYVGGMAF 4387
+SPNLR+SPT D FSPYVGGMAF
Sbjct: 1513 MSPNLRMSPTVDGVAFSPYVGGMAF 1537
>gb|EXC35292.1| DNA-directed RNA polymerase II subunit rpb1 [Morus notabilis]
Length = 1866
Score = 2674 bits (6931), Expect = 0.0
Identities = 1316/1484 (88%), Positives = 1402/1484 (94%), Gaps = 22/1484 (1%)
Frame = +2
Query: 2 AECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEDDHKFKLAQKVKNPKAR 181
AECPGHFGHLELAKPMFHIGFMKTVL+IMRCVCFNCSKI+ DEDDHKFK A K+KNPK +
Sbjct: 67 AECPGHFGHLELAKPMFHIGFMKTVLTIMRCVCFNCSKIMVDEDDHKFKQALKIKNPKNK 126
Query: 182 LKRILDACKNKTKCEGGDEIEGQGRDSEEPVKKARGGCGAQQPKLTIEGMKMIAEYKLQR 361
LK+ILDACKNK+KCEGGD+I QG++SEEPVKK+RGGCGAQQPKL+I+GMKM+AEYK QR
Sbjct: 127 LKKILDACKNKSKCEGGDDINVQGQESEEPVKKSRGGCGAQQPKLSIDGMKMVAEYKSQR 186
Query: 362 KKSDDQEQLPEPVERKQQLSAERVLSVLKRISDEDCNLLGLNPKYARPDWMILQVLXXXX 541
KK D+QEQLPEPVERKQ L+AERVLSVLKRISDEDC LLGLNPKYARPDWMILQVL
Sbjct: 187 KKIDEQEQLPEPVERKQTLTAERVLSVLKRISDEDCQLLGLNPKYARPDWMILQVLPIPP 246
Query: 542 XXXXXSVMMDTSSRSE--DDLTHQLAMIIRHNENLRRQERNGAPAHIISEFAQLLQFHVA 715
SVMMDTSSRSE DDLTHQLAMIIRHNENLRRQERNG+PAHIISEFAQLLQFH+A
Sbjct: 247 PPVRPSVMMDTSSRSEASDDLTHQLAMIIRHNENLRRQERNGSPAHIISEFAQLLQFHIA 306
Query: 716 TYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINI 895
TYFDNELPG PRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINI
Sbjct: 307 TYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINI 366
Query: 896 DQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIREDGQRLDLRYL 1075
D+LGVPWSIALNLTYPETVTPYNIERLKELVE GPHPPPGKTGAKYIIR+DGQRLDLRYL
Sbjct: 367 DELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYL 426
Query: 1076 KKSSDHHLELGYK--------------------VERHLNDGDFVLFNRQPSLHKMSIMGH 1195
KKSSDHHLELGYK VERHLNDGDFVLFNRQPSLHKMSIMGH
Sbjct: 427 KKSSDHHLELGYKARLPILLLLLLFLGPWSGSVVERHLNDGDFVLFNRQPSLHKMSIMGH 486
Query: 1196 RIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANR 1375
RIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NR
Sbjct: 487 RIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNR 546
Query: 1376 PVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPTILKPRPLWTGKQVF 1555
PVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAP ILKPRPLWTGKQVF
Sbjct: 547 PVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVF 606
Query: 1556 NLIIPKQINLMRTSAWHSESETGFLTPGDTQVRIERGEVITGTLCKKTLGTSTGSLIHVI 1735
NLIIPKQINL RTSAWH+ESE+G++TPGDT VRIE+GE+++GTLCKKTLGTS+GSLIHVI
Sbjct: 607 NLIIPKQINLNRTSAWHAESESGYITPGDTLVRIEKGELLSGTLCKKTLGTSSGSLIHVI 666
Query: 1736 WEEVGPDAARKFLGHTQWLVNYWLLQQAFSIGIGDTIADASTMEKINETISKAKNEVKEL 1915
WEEVGPDAARKFLGHTQWLVNYWLLQ FSIGIGDTIADASTMEKINETIS+AKN+VKEL
Sbjct: 667 WEEVGPDAARKFLGHTQWLVNYWLLQNGFSIGIGDTIADASTMEKINETISRAKNDVKEL 726
Query: 1916 IRAAQEKQLEAEPGRTMMDSFENRVNQVLNKARDDAGSSAQKSLAESNNLKAMVTAGSKG 2095
IR AQ K+LEAEPGRTMM+SFEN+VNQVLNKARDDAGSSAQKSL+ESNNLKAMVTAGSKG
Sbjct: 727 IRKAQAKELEAEPGRTMMESFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKG 786
Query: 2096 SFINISQMTACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEF 2275
SFINISQMTACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEF
Sbjct: 787 SFINISQMTACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEF 846
Query: 2276 FFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGM 2455
FFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGM
Sbjct: 847 FFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGM 906
Query: 2456 DAVWIESQRLDSLKMKKGEFNKVYGYEFDDENWNPSYLLPEHVDDLQNIREFRNVFDAEL 2635
D+VWIESQ+LDSLKMKK EF +V+ YEFD+E WNP+Y+LPEHV+DL+ IREFRNVFDAE+
Sbjct: 907 DSVWIESQKLDSLKMKKTEFERVFRYEFDNETWNPTYMLPEHVEDLKTIREFRNVFDAEV 966
Query: 2636 KKLEEDRLQLGKDIVTTGDDVWPMPVNLKRLIWNAQKTFKIDLRRPSGMHPMEIVEAVDK 2815
+KLE DRLQLG +I TTGD+ WP+PVNLKRLI NAQKTFKID RR S MHPMEIVEA+DK
Sbjct: 967 QKLESDRLQLGTEIATTGDNSWPLPVNLKRLIQNAQKTFKIDFRRTSDMHPMEIVEAIDK 1026
Query: 2816 LQERLKVVHGDDPMSTEAQKNATLFFNILLRSTLASKRVLKEYRLTKEAFEWVVGEIESR 2995
LQERLKVV G+DP+S EAQKNATLFFNILLRST ASKRVL+EYRLT+E FEWV+GEIESR
Sbjct: 1027 LQERLKVVPGEDPLSVEAQKNATLFFNILLRSTFASKRVLEEYRLTREGFEWVIGEIESR 1086
Query: 2996 FLQSLVASGEMIGCVAAQSIGEPATQMTLNTFHFAGVSAKNVTLGVPRLREIINIAKKIK 3175
FLQSLVA GEMIGCVAAQSIGEPATQMTLNTFH+AGVSAKNVTLGVPRLREIIN+AK+IK
Sbjct: 1087 FLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIK 1146
Query: 3176 TPSLSVYLKPEVNKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDIDFVKS 3355
TPSLSV+LKPE +KTKERAK VQCALEYTTLRSVTQATEVWYDPDPMSTII+ED+DFV+S
Sbjct: 1147 TPSLSVFLKPEASKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMSTIIDEDVDFVRS 1206
Query: 3356 YYEMPDEEISPDKISPWLLRVELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAE 3535
YYEMPDEEI+PDKISPWLLR+ELNREMMVDKKLSMADIAEKIN+EFDDDLTCIFNDDNAE
Sbjct: 1207 YYEMPDEEINPDKISPWLLRIELNREMMVDKKLSMADIAEKINVEFDDDLTCIFNDDNAE 1266
Query: 3536 KLILRIRIMNDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNWKRVR 3715
KLILRIRIMNDEAPKG+L DE+AEDDVFLKKIESNMLTEM+LRGIPDINKVFIK+ K +
Sbjct: 1267 KLILRIRIMNDEAPKGDLTDEAAEDDVFLKKIESNMLTEMSLRGIPDINKVFIKHGKVNK 1326
Query: 3716 FDDDEGFMPEVEWMLDTEGVNLLAVICHEDVDATRTTSNHLIEVMEVLGIEAVRKSLLDE 3895
FD+++GF PE EWMLDTEGVNLLAVICHEDVDA RTTSNHLIEV+EVLGIEAVR+SLLDE
Sbjct: 1327 FDENDGFKPENEWMLDTEGVNLLAVICHEDVDAKRTTSNHLIEVIEVLGIEAVRRSLLDE 1386
Query: 3896 LRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLD 4075
LRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLD
Sbjct: 1387 LRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLD 1446
Query: 4076 AAVYAETDHLRGVTENIMLGQLAPIGTGDCALYLNDKMLEHAIDLQLPSYMEGLDFGMTP 4255
AAVYAETD+LRGVTENIMLGQLAPIGTG CALYLND+ML++AI+LQLPSYM+GLDFGMTP
Sbjct: 1447 AAVYAETDYLRGVTENIMLGQLAPIGTGGCALYLNDEMLKNAIELQLPSYMDGLDFGMTP 1506
Query: 4256 SRSPIMGTPYRDGMMSPNYMLSPNLRLSPTNDAQFSPYVGGMAF 4387
SRSP+ GTPY +GMMSP Y+LSPNLRLSP +DAQFSPYVGGMAF
Sbjct: 1507 SRSPVSGTPYHEGMMSPGYLLSPNLRLSPISDAQFSPYVGGMAF 1550
>ref|XP_006590737.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like [Glycine
max]
Length = 1827
Score = 2668 bits (6915), Expect = 0.0
Identities = 1309/1462 (89%), Positives = 1394/1462 (95%)
Frame = +2
Query: 2 AECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEDDHKFKLAQKVKNPKAR 181
AECPGHFGHLELAKPMFHIGF+KTVL+IMRCVCFNCSKILADE+DHKFK A +++NPK R
Sbjct: 74 AECPGHFGHLELAKPMFHIGFLKTVLTIMRCVCFNCSKILADENDHKFKQALRIRNPKNR 133
Query: 182 LKRILDACKNKTKCEGGDEIEGQGRDSEEPVKKARGGCGAQQPKLTIEGMKMIAEYKLQR 361
LK+ILDACKNK+KCEGGDEI+ G+D++EPVKK+RGGCGAQQPK+TIEGMKMIAEYK QR
Sbjct: 134 LKKILDACKNKSKCEGGDEIDIPGQDTDEPVKKSRGGCGAQQPKITIEGMKMIAEYKAQR 193
Query: 362 KKSDDQEQLPEPVERKQQLSAERVLSVLKRISDEDCNLLGLNPKYARPDWMILQVLXXXX 541
KKSDDQEQLPEPVERKQ LSAERVL VLKRISDEDC LLGLNPKYARPDWMILQVL
Sbjct: 194 KKSDDQEQLPEPVERKQTLSAERVLGVLKRISDEDCQLLGLNPKYARPDWMILQVLPIPP 253
Query: 542 XXXXXSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIISEFAQLLQFHVATY 721
SVMMDTSSRSEDDLTHQLAMIIRHNENL+RQERNG+PAHIISEFAQLLQFH+ATY
Sbjct: 254 PPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGSPAHIISEFAQLLQFHIATY 313
Query: 722 FDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDQ 901
FDNELPG PRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDQ
Sbjct: 314 FDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDQ 373
Query: 902 LGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIREDGQRLDLRYLKK 1081
LGVPWSIALNLTYPETVTPYNIERLKELVE GPHPPPGKTGAKYIIR+DGQRLDLRYLKK
Sbjct: 374 LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLKK 433
Query: 1082 SSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNA 1261
SSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNA
Sbjct: 434 SSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNA 493
Query: 1262 DFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKITKRDTF 1441
DFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDTLLGCRKITKRDTF
Sbjct: 494 DFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTF 553
Query: 1442 IEKDVFMNILMWWEDFDGKVPAPTILKPRPLWTGKQVFNLIIPKQINLMRTSAWHSESET 1621
I KDVFMNILMWWEDFDGKVPAP ILKP PLWTGKQVFNLIIPKQINL+R S+WHSESE
Sbjct: 554 ITKDVFMNILMWWEDFDGKVPAPAILKPEPLWTGKQVFNLIIPKQINLIRYSSWHSESER 613
Query: 1622 GFLTPGDTQVRIERGEVITGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNY 1801
G +TPGDT VRIE+GE++TGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNY
Sbjct: 614 GSITPGDTMVRIEKGELLTGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNY 673
Query: 1802 WLLQQAFSIGIGDTIADASTMEKINETISKAKNEVKELIRAAQEKQLEAEPGRTMMDSFE 1981
WLLQ AFSIGIGDTIADASTME IN+TIS AK +VK+LIR AQEK+LEAEPGRTMMDSFE
Sbjct: 674 WLLQNAFSIGIGDTIADASTMETINQTISAAKEKVKQLIREAQEKKLEAEPGRTMMDSFE 733
Query: 1982 NRVNQVLNKARDDAGSSAQKSLAESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRI 2161
NRVNQ LN+ARDDAG+SAQKSL+ESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRI
Sbjct: 734 NRVNQTLNRARDDAGNSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRI 793
Query: 2162 PYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETG 2341
PYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETG
Sbjct: 794 PYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETG 853
Query: 2342 YIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQRLDSLKMKKGEFNK 2521
YIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIE+Q+LDSLKMKK EF++
Sbjct: 854 YIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIETQKLDSLKMKKTEFDR 913
Query: 2522 VYGYEFDDENWNPSYLLPEHVDDLQNIREFRNVFDAELKKLEEDRLQLGKDIVTTGDDVW 2701
V+ YEFDDENW P+Y+L E V+DL+ IREFRNVF+AE++KLE DR QL +I TTGD
Sbjct: 914 VFRYEFDDENWKPTYMLEEPVEDLKTIREFRNVFEAEVQKLEADRYQLATEIATTGDSSL 973
Query: 2702 PMPVNLKRLIWNAQKTFKIDLRRPSGMHPMEIVEAVDKLQERLKVVHGDDPMSTEAQKNA 2881
P+PVNLKRLIWNAQKTFK+D RRPS MHPMEIVEA+DKLQERLKVV G+D +S EAQKNA
Sbjct: 974 PLPVNLKRLIWNAQKTFKVDFRRPSDMHPMEIVEAIDKLQERLKVVPGEDLLSQEAQKNA 1033
Query: 2882 TLFFNILLRSTLASKRVLKEYRLTKEAFEWVVGEIESRFLQSLVASGEMIGCVAAQSIGE 3061
TL FNILLRST ASKRVL+EYRL++EAFEWVVGEIESRFLQSLVASGEMIGCVAAQSIGE
Sbjct: 1034 TLLFNILLRSTFASKRVLEEYRLSREAFEWVVGEIESRFLQSLVASGEMIGCVAAQSIGE 1093
Query: 3062 PATQMTLNTFHFAGVSAKNVTLGVPRLREIINIAKKIKTPSLSVYLKPEVNKTKERAKNV 3241
PATQMTLNTFH+AGVSAKNVTLGVPRLREIIN+AK+IKTPSLSVYL+ +V KTKERAK+V
Sbjct: 1094 PATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLRSDVGKTKERAKSV 1153
Query: 3242 QCALEYTTLRSVTQATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEEISPDKISPWLLRVE 3421
QCALEYTTLRSVTQATEVWYDPDPMSTIIEED DFVKSYYEMPDEE++ +KISPWLLR+E
Sbjct: 1154 QCALEYTTLRSVTQATEVWYDPDPMSTIIEEDADFVKSYYEMPDEEVALEKISPWLLRIE 1213
Query: 3422 LNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGELNDES 3601
LNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGE+ DES
Sbjct: 1214 LNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGEIQDES 1273
Query: 3602 AEDDVFLKKIESNMLTEMALRGIPDINKVFIKNWKRVRFDDDEGFMPEVEWMLDTEGVNL 3781
AEDDVFLKKIESNMLTEM LRGIPDINKVFIKN K +FD+++GF P EWMLDTEGVNL
Sbjct: 1274 AEDDVFLKKIESNMLTEMTLRGIPDINKVFIKNTKVQKFDENQGFKPNEEWMLDTEGVNL 1333
Query: 3782 LAVICHEDVDATRTTSNHLIEVMEVLGIEAVRKSLLDELRVVISFDGSYVNYRHLAILCD 3961
LAV+CHEDVDATRTTSNHLIEV+EVLGIEAVR++LLDELRVVISFDGSYVNYRHLAILCD
Sbjct: 1334 LAVMCHEDVDATRTTSNHLIEVIEVLGIEAVRRALLDELRVVISFDGSYVNYRHLAILCD 1393
Query: 3962 TMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDHLRGVTENIMLGQL 4141
TMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETD+LRGVTENIMLGQL
Sbjct: 1394 TMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDYLRGVTENIMLGQL 1453
Query: 4142 APIGTGDCALYLNDKMLEHAIDLQLPSYMEGLDFGMTPSRSPIMGTPYRDGMMSPNYMLS 4321
APIGTG+CALYLND+ML++AI+LQLPSYM+GLDFGMTP+RSPI GTPY +G+MSP+Y+LS
Sbjct: 1454 APIGTGECALYLNDEMLKNAIELQLPSYMDGLDFGMTPARSPISGTPYHEGLMSPSYLLS 1513
Query: 4322 PNLRLSPTNDAQFSPYVGGMAF 4387
PNLRLSPT+DAQFSPYVGGMAF
Sbjct: 1514 PNLRLSPTSDAQFSPYVGGMAF 1535
>ref|XP_007157862.1| hypothetical protein PHAVU_002G104500g [Phaseolus vulgaris]
gi|561031277|gb|ESW29856.1| hypothetical protein
PHAVU_002G104500g [Phaseolus vulgaris]
Length = 1834
Score = 2665 bits (6909), Expect = 0.0
Identities = 1306/1462 (89%), Positives = 1392/1462 (95%)
Frame = +2
Query: 2 AECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEDDHKFKLAQKVKNPKAR 181
AECPGHFGHLELAKPMFHIGF+KTVL+IMRCVCFNCSKILADE+DHKFK A +++NPK R
Sbjct: 74 AECPGHFGHLELAKPMFHIGFLKTVLTIMRCVCFNCSKILADENDHKFKQALRIRNPKNR 133
Query: 182 LKRILDACKNKTKCEGGDEIEGQGRDSEEPVKKARGGCGAQQPKLTIEGMKMIAEYKLQR 361
LK+ILDACKNK+KCEGGDEI+ G+D++EPVKK+RGGCGAQQPK+TIEGMK+IAEYK QR
Sbjct: 134 LKKILDACKNKSKCEGGDEIDIPGQDTDEPVKKSRGGCGAQQPKITIEGMKIIAEYKAQR 193
Query: 362 KKSDDQEQLPEPVERKQQLSAERVLSVLKRISDEDCNLLGLNPKYARPDWMILQVLXXXX 541
KKSDDQEQLPEPVERKQ LSAERVL VLKRISDEDC LLGLNPKYARPDWMILQVL
Sbjct: 194 KKSDDQEQLPEPVERKQTLSAERVLGVLKRISDEDCQLLGLNPKYARPDWMILQVLPIPP 253
Query: 542 XXXXXSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIISEFAQLLQFHVATY 721
SVMMDTSSRSEDDLTHQLAMIIRHNENL+RQERNG+PAHIISEFAQLLQFH+ATY
Sbjct: 254 PPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGSPAHIISEFAQLLQFHIATY 313
Query: 722 FDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDQ 901
FDNELPG PRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDQ
Sbjct: 314 FDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDQ 373
Query: 902 LGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIREDGQRLDLRYLKK 1081
LGVPWSIALNLTYPETVTPYNIERLKELVE GPHPPPGKTGAKYIIR+DGQRLDLRYLKK
Sbjct: 374 LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLKK 433
Query: 1082 SSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNA 1261
SSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNA
Sbjct: 434 SSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNA 493
Query: 1262 DFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKITKRDTF 1441
DFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDTLLGCRKITKRDTF
Sbjct: 494 DFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTF 553
Query: 1442 IEKDVFMNILMWWEDFDGKVPAPTILKPRPLWTGKQVFNLIIPKQINLMRTSAWHSESET 1621
I KDVFMN LMWWEDFDGKVP PTILKP PLWTGKQVFNLIIPK INL+R S+WHSESE
Sbjct: 554 ISKDVFMNTLMWWEDFDGKVPTPTILKPEPLWTGKQVFNLIIPKPINLIRYSSWHSESER 613
Query: 1622 GFLTPGDTQVRIERGEVITGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNY 1801
G +TPGDT VRIE+GE++TGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNY
Sbjct: 614 GSITPGDTMVRIEKGELLTGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNY 673
Query: 1802 WLLQQAFSIGIGDTIADASTMEKINETISKAKNEVKELIRAAQEKQLEAEPGRTMMDSFE 1981
WLLQ AFSIGIGDTIADASTME IN+TIS AK +VK+LIR AQEK+LEAEPGRTMMDSFE
Sbjct: 674 WLLQNAFSIGIGDTIADASTMETINQTISAAKEKVKQLIRDAQEKKLEAEPGRTMMDSFE 733
Query: 1982 NRVNQVLNKARDDAGSSAQKSLAESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRI 2161
NRVNQ LN+ARDDAG+SAQKSL+ESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRI
Sbjct: 734 NRVNQTLNRARDDAGNSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRI 793
Query: 2162 PYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETG 2341
PYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETG
Sbjct: 794 PYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETG 853
Query: 2342 YIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQRLDSLKMKKGEFNK 2521
YIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIE+Q+LDSLKMKK EF++
Sbjct: 854 YIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIETQKLDSLKMKKTEFDR 913
Query: 2522 VYGYEFDDENWNPSYLLPEHVDDLQNIREFRNVFDAELKKLEEDRLQLGKDIVTTGDDVW 2701
V+ YEFDDENW P+Y+L E V+DL+ IREFRNVF+AE++KLE DR QL +I TTGD
Sbjct: 914 VFRYEFDDENWKPTYMLEEPVEDLKTIREFRNVFEAEVQKLEADRYQLATEIATTGDSSL 973
Query: 2702 PMPVNLKRLIWNAQKTFKIDLRRPSGMHPMEIVEAVDKLQERLKVVHGDDPMSTEAQKNA 2881
P+PVNLKRLIWNAQKTFK+D RRPS MHPMEIVEA+DKLQERL+VV G+D +S EAQKNA
Sbjct: 974 PLPVNLKRLIWNAQKTFKVDFRRPSDMHPMEIVEAIDKLQERLRVVPGEDLLSQEAQKNA 1033
Query: 2882 TLFFNILLRSTLASKRVLKEYRLTKEAFEWVVGEIESRFLQSLVASGEMIGCVAAQSIGE 3061
TL FNILLRST ASKRVL+EYRL++EAFEWVVGEIESRFLQSLVASGEMIGCVAAQSIGE
Sbjct: 1034 TLLFNILLRSTFASKRVLEEYRLSREAFEWVVGEIESRFLQSLVASGEMIGCVAAQSIGE 1093
Query: 3062 PATQMTLNTFHFAGVSAKNVTLGVPRLREIINIAKKIKTPSLSVYLKPEVNKTKERAKNV 3241
PATQMTLNTFH+AGVSAKNVTLGVPRLREIIN+AK+IKTPSLSVYL P+V KTKERAK+V
Sbjct: 1094 PATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLNPDVGKTKERAKSV 1153
Query: 3242 QCALEYTTLRSVTQATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEEISPDKISPWLLRVE 3421
QCALEYTTLRSVTQATEVWYDP+PMSTII+ED+DFVKSYYEMPDEE++ +KISPWLLR+E
Sbjct: 1154 QCALEYTTLRSVTQATEVWYDPEPMSTIIDEDVDFVKSYYEMPDEEVALEKISPWLLRIE 1213
Query: 3422 LNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGELNDES 3601
LNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGE+ DES
Sbjct: 1214 LNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGEIQDES 1273
Query: 3602 AEDDVFLKKIESNMLTEMALRGIPDINKVFIKNWKRVRFDDDEGFMPEVEWMLDTEGVNL 3781
AEDDVFLKKIESNMLTEM LRGIPDINKVFIKN K +FD+ EGF P EWMLDTEGVNL
Sbjct: 1274 AEDDVFLKKIESNMLTEMTLRGIPDINKVFIKNTKVQKFDESEGFKPNEEWMLDTEGVNL 1333
Query: 3782 LAVICHEDVDATRTTSNHLIEVMEVLGIEAVRKSLLDELRVVISFDGSYVNYRHLAILCD 3961
LAV+CHEDVDATRTTSNHLIEV+EVLGIEAVR++LLDELRVVISFDGSYVNYRHLAILCD
Sbjct: 1334 LAVMCHEDVDATRTTSNHLIEVIEVLGIEAVRRALLDELRVVISFDGSYVNYRHLAILCD 1393
Query: 3962 TMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDHLRGVTENIMLGQL 4141
TMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDHLRGVTENIMLGQL
Sbjct: 1394 TMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDHLRGVTENIMLGQL 1453
Query: 4142 APIGTGDCALYLNDKMLEHAIDLQLPSYMEGLDFGMTPSRSPIMGTPYRDGMMSPNYMLS 4321
APIGTG+CALYLND+ML++AI+LQLPSYM+GLDFGMTP+RSPI GTPY +G+MSP+Y+LS
Sbjct: 1454 APIGTGECALYLNDEMLKNAIELQLPSYMDGLDFGMTPARSPISGTPYHEGLMSPSYLLS 1513
Query: 4322 PNLRLSPTNDAQFSPYVGGMAF 4387
PNLRLSPT+DAQFSPYVGGMAF
Sbjct: 1514 PNLRLSPTSDAQFSPYVGGMAF 1535
>ref|XP_002530639.1| DNA-directed RNA polymerase II largest subunit, putative [Ricinus
communis] gi|223529812|gb|EEF31747.1| DNA-directed RNA
polymerase II largest subunit, putative [Ricinus
communis]
Length = 1855
Score = 2665 bits (6909), Expect = 0.0
Identities = 1304/1462 (89%), Positives = 1389/1462 (95%)
Frame = +2
Query: 2 AECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEDDHKFKLAQKVKNPKAR 181
AECPGHFGHLELAKPMFHIGF+KTVLSIMRCVCFNCSKILADE+DHKFK A K+KNPK R
Sbjct: 74 AECPGHFGHLELAKPMFHIGFLKTVLSIMRCVCFNCSKILADEEDHKFKQALKIKNPKNR 133
Query: 182 LKRILDACKNKTKCEGGDEIEGQGRDSEEPVKKARGGCGAQQPKLTIEGMKMIAEYKLQR 361
LK+ILDACKNKTKCEGGD+I+ +D++EPVKK+RGGCGAQQP++TIEGMKMIAEYK QR
Sbjct: 134 LKKILDACKNKTKCEGGDDIDVHSQDTDEPVKKSRGGCGAQQPRMTIEGMKMIAEYKAQR 193
Query: 362 KKSDDQEQLPEPVERKQQLSAERVLSVLKRISDEDCNLLGLNPKYARPDWMILQVLXXXX 541
KK+DDQEQLPEPVERKQ L+AERVL VLKRISD+DC LLG NPKYARPDWMILQVL
Sbjct: 194 KKNDDQEQLPEPVERKQTLTAERVLGVLKRISDDDCRLLGFNPKYARPDWMILQVLPIPP 253
Query: 542 XXXXXSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIISEFAQLLQFHVATY 721
SVMMDTSSRSEDDLTHQLAMIIRHNENL++QE+ GAPAHIISEFAQLLQFHVATY
Sbjct: 254 PPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKKQEKGGAPAHIISEFAQLLQFHVATY 313
Query: 722 FDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDQ 901
FDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDP INIDQ
Sbjct: 314 FDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPNINIDQ 373
Query: 902 LGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIREDGQRLDLRYLKK 1081
LGVPWSIALNLTYPETVTPYNIERLKELVE GPHPPPGKTGAKYIIR+DGQRLDLRYLKK
Sbjct: 374 LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLKK 433
Query: 1082 SSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNA 1261
SSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNA
Sbjct: 434 SSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNA 493
Query: 1262 DFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKITKRDTF 1441
DFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDTLLGCRKITKRDTF
Sbjct: 494 DFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTF 553
Query: 1442 IEKDVFMNILMWWEDFDGKVPAPTILKPRPLWTGKQVFNLIIPKQINLMRTSAWHSESET 1621
IEKDVFMNILMWWEDFDGKVPAP ILKPRPLWTGKQVFNLIIPKQINL+RT+AWHS+SE
Sbjct: 554 IEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQINLIRTAAWHSDSER 613
Query: 1622 GFLTPGDTQVRIERGEVITGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNY 1801
G +TPGDT VRIE+GE+++GT+CKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNY
Sbjct: 614 GVITPGDTLVRIEKGELLSGTVCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNY 673
Query: 1802 WLLQQAFSIGIGDTIADASTMEKINETISKAKNEVKELIRAAQEKQLEAEPGRTMMDSFE 1981
WLLQ FSIGIGDTIADA+TMEKINETIS AKN VKELIR AQ K+LE +PGRTMM+SFE
Sbjct: 674 WLLQNGFSIGIGDTIADAATMEKINETISNAKNAVKELIRKAQNKELEPKPGRTMMESFE 733
Query: 1982 NRVNQVLNKARDDAGSSAQKSLAESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRI 2161
N VNQVLN+ARDDAGSSAQKSL+ESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRI
Sbjct: 734 NEVNQVLNRARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRI 793
Query: 2162 PYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETG 2341
PYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETG
Sbjct: 794 PYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETG 853
Query: 2342 YIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQRLDSLKMKKGEFNK 2521
YIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ+LDSLKMKK EF++
Sbjct: 854 YIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKSEFDR 913
Query: 2522 VYGYEFDDENWNPSYLLPEHVDDLQNIREFRNVFDAELKKLEEDRLQLGKDIVTTGDDVW 2701
V+ YE DDENWNP+Y+ +H+DDL+NIRE R+VFDAE++KLE DR QLG +I TTGD W
Sbjct: 914 VFKYELDDENWNPTYMYQDHIDDLKNIRELRDVFDAEVQKLEADRYQLGTEIATTGDSSW 973
Query: 2702 PMPVNLKRLIWNAQKTFKIDLRRPSGMHPMEIVEAVDKLQERLKVVHGDDPMSTEAQKNA 2881
P+PVNL+RLIWNAQKTFK+D RRPS +HPME VEAVDKLQERLKVV GDDP+S EAQKNA
Sbjct: 974 PLPVNLRRLIWNAQKTFKVDKRRPSDIHPMEAVEAVDKLQERLKVVPGDDPLSVEAQKNA 1033
Query: 2882 TLFFNILLRSTLASKRVLKEYRLTKEAFEWVVGEIESRFLQSLVASGEMIGCVAAQSIGE 3061
TLFF ILLRSTLASKRVL++YRLT+EAF+WV+GEIESRFLQSLVA GEMIGCVAAQSIGE
Sbjct: 1034 TLFFGILLRSTLASKRVLEDYRLTREAFDWVIGEIESRFLQSLVAPGEMIGCVAAQSIGE 1093
Query: 3062 PATQMTLNTFHFAGVSAKNVTLGVPRLREIINIAKKIKTPSLSVYLKPEVNKTKERAKNV 3241
PATQMTLNTFH+AGVSAKNVTLGVPRLREIIN+AKKIKTPSLS++L PE NKTKERAKNV
Sbjct: 1094 PATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSIFLIPECNKTKERAKNV 1153
Query: 3242 QCALEYTTLRSVTQATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEEISPDKISPWLLRVE 3421
QCALEYTTLRSVTQATEVWYDPDPMSTIIEED+DFVKSYYEMPDEEISP+KISPWLLR+E
Sbjct: 1154 QCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVDFVKSYYEMPDEEISPEKISPWLLRIE 1213
Query: 3422 LNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGELNDES 3601
LNREMMVDKKL+MADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGELNDES
Sbjct: 1214 LNREMMVDKKLNMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGELNDES 1273
Query: 3602 AEDDVFLKKIESNMLTEMALRGIPDINKVFIKNWKRVRFDDDEGFMPEVEWMLDTEGVNL 3781
AEDDVFLKKIESNMLTEMALRGIPDINKVFIK K +FD++EGF EWMLDTEGVNL
Sbjct: 1274 AEDDVFLKKIESNMLTEMALRGIPDINKVFIKQSKVSKFDENEGFKTIEEWMLDTEGVNL 1333
Query: 3782 LAVICHEDVDATRTTSNHLIEVMEVLGIEAVRKSLLDELRVVISFDGSYVNYRHLAILCD 3961
LAV+C+E+VDA RTTSNHLIEV+EVLGIEAVR+SLLDELRVVISFDGSYVNYRHLAILCD
Sbjct: 1334 LAVMCNENVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAILCD 1393
Query: 3962 TMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDHLRGVTENIMLGQL 4141
TMTYRGHLMAITRHGINRNDTGP+MRCSFEETVDILLDAAVYAE D+LRGVTENIMLGQL
Sbjct: 1394 TMTYRGHLMAITRHGINRNDTGPLMRCSFEETVDILLDAAVYAEADYLRGVTENIMLGQL 1453
Query: 4142 APIGTGDCALYLNDKMLEHAIDLQLPSYMEGLDFGMTPSRSPIMGTPYRDGMMSPNYMLS 4321
APIGTGDCALYLND ML++AI+LQLPSYM+GLDFGMTP+RSP+ TPY DGMMSP+Y+LS
Sbjct: 1454 APIGTGDCALYLNDDMLKNAIELQLPSYMDGLDFGMTPARSPVSVTPYHDGMMSPSYLLS 1513
Query: 4322 PNLRLSPTNDAQFSPYVGGMAF 4387
P+LRLSPT DAQFSPYV GM F
Sbjct: 1514 PSLRLSPTTDAQFSPYVSGMPF 1535
>ref|XP_006425357.1| hypothetical protein CICLE_v10024686mg [Citrus clementina]
gi|557527347|gb|ESR38597.1| hypothetical protein
CICLE_v10024686mg [Citrus clementina]
Length = 1860
Score = 2660 bits (6895), Expect = 0.0
Identities = 1299/1462 (88%), Positives = 1385/1462 (94%)
Frame = +2
Query: 2 AECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEDDHKFKLAQKVKNPKAR 181
AECPGHFGHLELAKPMFHIGFMKTVLSIMR VCFNCSKILADEDDHKFK A K++NPK R
Sbjct: 74 AECPGHFGHLELAKPMFHIGFMKTVLSIMRSVCFNCSKILADEDDHKFKQALKIRNPKNR 133
Query: 182 LKRILDACKNKTKCEGGDEIEGQGRDSEEPVKKARGGCGAQQPKLTIEGMKMIAEYKLQR 361
LK+ILDACKNKTKCEGGDEI+ G+D EEP+KK +GGCGAQQPKLTIEGMKMIAEYK QR
Sbjct: 134 LKKILDACKNKTKCEGGDEIDVPGQDGEEPLKKKKGGCGAQQPKLTIEGMKMIAEYKAQR 193
Query: 362 KKSDDQEQLPEPVERKQQLSAERVLSVLKRISDEDCNLLGLNPKYARPDWMILQVLXXXX 541
KK+DDQEQLPEPVERKQ L+AERVL VLKRISDEDC LLGLNPKYARPDWMILQVL
Sbjct: 194 KKNDDQEQLPEPVERKQTLTAERVLGVLKRISDEDCQLLGLNPKYARPDWMILQVLPIPP 253
Query: 542 XXXXXSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIISEFAQLLQFHVATY 721
SVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIISEFAQLLQFH+ATY
Sbjct: 254 PPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIISEFAQLLQFHIATY 313
Query: 722 FDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDQ 901
FDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDQ
Sbjct: 314 FDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDQ 373
Query: 902 LGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIREDGQRLDLRYLKK 1081
LGVPWSIALNLTYPETVTPYNIERLKELVE GPHPPPGKTGAKYIIR+DGQRLDLRYLKK
Sbjct: 374 LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLKK 433
Query: 1082 SSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNA 1261
SSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNA
Sbjct: 434 SSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNA 493
Query: 1262 DFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKITKRDTF 1441
DFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDTLLGCRKITKRDTF
Sbjct: 494 DFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTF 553
Query: 1442 IEKDVFMNILMWWEDFDGKVPAPTILKPRPLWTGKQVFNLIIPKQINLMRTSAWHSESET 1621
IEKDVFMNILMWWEDFDGKVP PTILKPRPLWTGKQVFNLIIPKQINL RT+AWH++++
Sbjct: 554 IEKDVFMNILMWWEDFDGKVPQPTILKPRPLWTGKQVFNLIIPKQINLFRTAAWHADNDK 613
Query: 1622 GFLTPGDTQVRIERGEVITGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNY 1801
G LT GDT VRIE+GE+++GTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNY
Sbjct: 614 GILTAGDTLVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNY 673
Query: 1802 WLLQQAFSIGIGDTIADASTMEKINETISKAKNEVKELIRAAQEKQLEAEPGRTMMDSFE 1981
WLLQ AFSIGIGDTIADA TME IN+TISKAKN VK LI+ AQ+K LE EPGRTMM+SFE
Sbjct: 674 WLLQNAFSIGIGDTIADAKTMETINDTISKAKNNVKNLIKQAQDKSLEPEPGRTMMESFE 733
Query: 1982 NRVNQVLNKARDDAGSSAQKSLAESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRI 2161
N+VNQVLN ARD+AGSSAQKSL+ESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRI
Sbjct: 734 NKVNQVLNTARDEAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRI 793
Query: 2162 PYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETG 2341
P+GF+DRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETG
Sbjct: 794 PFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETG 853
Query: 2342 YIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQRLDSLKMKKGEFNK 2521
YIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIESQ LDSLKMKK EF+K
Sbjct: 854 YIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQTLDSLKMKKSEFDK 913
Query: 2522 VYGYEFDDENWNPSYLLPEHVDDLQNIREFRNVFDAELKKLEEDRLQLGKDIVTTGDDVW 2701
+ +E D+ENWNP+Y+L E++DDL+ I+E R+VFDAE++KLE DR QL +I T+GD W
Sbjct: 914 AFRFEMDEENWNPNYMLQEYIDDLKTIKELRDVFDAEVQKLEADRYQLATEIATSGDSSW 973
Query: 2702 PMPVNLKRLIWNAQKTFKIDLRRPSGMHPMEIVEAVDKLQERLKVVHGDDPMSTEAQKNA 2881
P+PVNLKRLIWNAQKTFK+D RRPS MHPME+VEAVDKLQERLKVV G+DP+S EAQKNA
Sbjct: 974 PLPVNLKRLIWNAQKTFKVDPRRPSDMHPMEVVEAVDKLQERLKVVPGEDPLSVEAQKNA 1033
Query: 2882 TLFFNILLRSTLASKRVLKEYRLTKEAFEWVVGEIESRFLQSLVASGEMIGCVAAQSIGE 3061
TLFFNILLRST ASKRVLKE+RLT+EAFEWV+GEIESRFLQSLVA GEMIGCVAAQSIGE
Sbjct: 1034 TLFFNILLRSTFASKRVLKEHRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGE 1093
Query: 3062 PATQMTLNTFHFAGVSAKNVTLGVPRLREIINIAKKIKTPSLSVYLKPEVNKTKERAKNV 3241
PATQMTLNTFH+AGVSAKNVTLGVPRLREIIN+AKKIKTPSLSV+LKP VN TKERAKNV
Sbjct: 1094 PATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVFLKPGVNSTKERAKNV 1153
Query: 3242 QCALEYTTLRSVTQATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEEISPDKISPWLLRVE 3421
QCALEYTTLRSVT+ATEVWYDPDPM TIIEED++FVKSYYEMPDE+I+P+KISPWLLR+E
Sbjct: 1154 QCALEYTTLRSVTEATEVWYDPDPMGTIIEEDVEFVKSYYEMPDEDIAPEKISPWLLRIE 1213
Query: 3422 LNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGELNDES 3601
LNREMMVDKKLSMA +AEKIN EFDDDLTCIFNDDNA+KLILRIRIMNDEAPKGELNDES
Sbjct: 1214 LNREMMVDKKLSMAAVAEKINQEFDDDLTCIFNDDNADKLILRIRIMNDEAPKGELNDES 1273
Query: 3602 AEDDVFLKKIESNMLTEMALRGIPDINKVFIKNWKRVRFDDDEGFMPEVEWMLDTEGVNL 3781
AEDDVFLKKIESNMLTEMALRGIPDINKVFIK K ++DD+EGF E EWMLDTEGVNL
Sbjct: 1274 AEDDVFLKKIESNMLTEMALRGIPDINKVFIKKGKTTKYDDNEGFKSEDEWMLDTEGVNL 1333
Query: 3782 LAVICHEDVDATRTTSNHLIEVMEVLGIEAVRKSLLDELRVVISFDGSYVNYRHLAILCD 3961
LAV+CHEDVDA RTTSNHLIE++EVLGIEAVR++LLDELRVVISFDGSYVNYRHLAILCD
Sbjct: 1334 LAVMCHEDVDARRTTSNHLIEIIEVLGIEAVRRALLDELRVVISFDGSYVNYRHLAILCD 1393
Query: 3962 TMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDHLRGVTENIMLGQL 4141
TMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAV+AE+D+LRGVTENIMLGQL
Sbjct: 1394 TMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAESDYLRGVTENIMLGQL 1453
Query: 4142 APIGTGDCALYLNDKMLEHAIDLQLPSYMEGLDFGMTPSRSPIMGTPYRDGMMSPNYMLS 4321
APIGTGDC+LYLND+ML++AI+LQLPSYMEGL+FGMTP+RSP+ GTPY DGMMSP Y+ S
Sbjct: 1454 APIGTGDCSLYLNDEMLKNAIELQLPSYMEGLEFGMTPARSPVSGTPYHDGMMSPGYLFS 1513
Query: 4322 PNLRLSPTNDAQFSPYVGGMAF 4387
PNLRLSP DAQFSPYVGGMAF
Sbjct: 1514 PNLRLSPVTDAQFSPYVGGMAF 1535
>gb|EYU42342.1| hypothetical protein MIMGU_mgv1a000091mg [Mimulus guttatus]
Length = 1842
Score = 2660 bits (6894), Expect = 0.0
Identities = 1306/1464 (89%), Positives = 1392/1464 (95%), Gaps = 2/1464 (0%)
Frame = +2
Query: 2 AECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEDDHKFKLAQKVKNPKAR 181
AECPGHFGHLELAKPMFHIGFMK VLSI+RCVCFNCSKILADE++ KFK A +++NPK R
Sbjct: 74 AECPGHFGHLELAKPMFHIGFMKIVLSILRCVCFNCSKILADEEEPKFKQAMRIRNPKNR 133
Query: 182 LKRILDACKNKTKCEGGDEIEGQGRDSEEPVKKARGGCGAQQPKLTIEGMKMIAEYKLQR 361
L++ILDACKNKTKC+GGDEI+G +D+EEPVKK+RGGCGAQQPK++I+GMKM+AEYKLQ+
Sbjct: 134 LRKILDACKNKTKCDGGDEIDGHSQDTEEPVKKSRGGCGAQQPKISIDGMKMVAEYKLQK 193
Query: 362 KKSDDQEQLPEPVERKQQLSAERVLSVLKRISDEDCNLLGLNPKYARPDWMILQVLXXXX 541
KKSDDQ+Q+PEPVERKQQLSAE+VLS+LKRI+DEDC LLGLNPK+ARPDWMILQVL
Sbjct: 194 KKSDDQDQMPEPVERKQQLSAEKVLSILKRITDEDCQLLGLNPKFARPDWMILQVLPIPP 253
Query: 542 XXXXXSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIISEFAQLLQFHVATY 721
SVMMDTS+RSEDDLTHQLAMIIRHNENL+RQERNGAPAHIISEFAQLLQFHVATY
Sbjct: 254 PPVRPSVMMDTSARSEDDLTHQLAMIIRHNENLKRQERNGAPAHIISEFAQLLQFHVATY 313
Query: 722 FDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDQ 901
FDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDQ
Sbjct: 314 FDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDQ 373
Query: 902 LGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIREDGQRLDLRYLKK 1081
LGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIR+DGQRLDLRYLKK
Sbjct: 374 LGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIRDDGQRLDLRYLKK 433
Query: 1082 SSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNA 1261
SSD HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNA
Sbjct: 434 SSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNA 493
Query: 1262 DFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKITKRDTF 1441
DFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKITKRDTF
Sbjct: 494 DFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKITKRDTF 553
Query: 1442 IEKDVFMNILMWWEDFDGKVPAPTILKPRPLWTGKQVFNLIIPKQINLMRTSAWHSESET 1621
IEKDVFMNILMWWEDFDGKVPAP ILKPRPLWTGKQVFNLIIPKQINL+R SAWH E+E
Sbjct: 554 IEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQINLLRYSAWHQETEK 613
Query: 1622 GFLTPGDTQVRIERGEVITGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNY 1801
GF+TPGDTQVRIE+GE++TGTLCKK LGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNY
Sbjct: 614 GFITPGDTQVRIEKGELLTGTLCKKALGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNY 673
Query: 1802 WLLQQAFSIGIGDTIADASTMEKINETISKAKNEVKELIRAAQEKQLEAEPGRTMMDSFE 1981
WLLQ AFS+GIGDTIADA+TMEKINETIS AKNEVKELIRAAQEKQLE EPGRTMM+SFE
Sbjct: 674 WLLQNAFSMGIGDTIADAATMEKINETISNAKNEVKELIRAAQEKQLEPEPGRTMMESFE 733
Query: 1982 NRVNQVLNKARDDAGSSAQKSLAESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRI 2161
NRVNQVLNKARDDAGSSAQKSL+ESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRI
Sbjct: 734 NRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRI 793
Query: 2162 PYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETG 2341
P+GF+DRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETG
Sbjct: 794 PFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETG 853
Query: 2342 YIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQRLDSLKMKKGEFNK 2521
YIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ L+SLK+KK +FN
Sbjct: 854 YIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQPLESLKLKKSDFND 913
Query: 2522 VYGYEFDDENWNPSYLLPEHVDDLQNIREFRNVFDAELKKLEEDRLQLGKDIVTTGDDVW 2701
+Y YE D+ NWNP+Y+LPE V+DL+ IRE R+VFDAE+ KLE DR QLG +I TTGD+ W
Sbjct: 914 MYKYEIDNSNWNPNYMLPEAVEDLKTIREIRSVFDAEVTKLEVDRFQLGTEIATTGDNSW 973
Query: 2702 PMPVNLKRLIWNAQKTFKIDLRRPSGMHPMEIVEAVDKLQERLKVVHGDDPMSTEAQKNA 2881
P+PVN+KRL+ NAQKTFK+D RRPS MHPMEIVEAVDKLQERLKVV GDD +STEAQKNA
Sbjct: 974 PLPVNIKRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERLKVVVGDDYLSTEAQKNA 1033
Query: 2882 TLFFNILLRSTLASKRVLKEYRLTKEAFEWVVGEIESRFLQSLVASGEMIGCVAAQSIGE 3061
TLFFNILLRS LASKRVLKEYRLT+EAFEWV+GEIESRFLQSLVA+GEMIGCVAAQSIGE
Sbjct: 1034 TLFFNILLRSALASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAAGEMIGCVAAQSIGE 1093
Query: 3062 PATQMTLNTFHFAGVSAKNVTLGVPRLREIINIAKKIKTPSLSVYLKPEVNKTKERAKNV 3241
PATQMTLNTFH+AGVSAKNVTLGVPRLREIIN+AKKIKTPSLSVYLKP+V+KTKE+AKNV
Sbjct: 1094 PATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKPDVSKTKEKAKNV 1153
Query: 3242 QCALEYTTLRSVTQATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEEISPDKISPWLLRVE 3421
QCALEYTTLRSVTQATEVWYDPDPMSTIIEED++FVKSYYEMPDEEI PDKISPWLLR+E
Sbjct: 1154 QCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVEFVKSYYEMPDEEIDPDKISPWLLRIE 1213
Query: 3422 LNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGELNDES 3601
LNREMMVDKKLSMADIAEKIN EF DDLTCIFNDDNAEKLILRIRIMN++APKGEL DES
Sbjct: 1214 LNREMMVDKKLSMADIAEKINTEFSDDLTCIFNDDNAEKLILRIRIMNEQAPKGELADES 1273
Query: 3602 AEDDVFLKKIESNMLTEMALRGIPDINKVFIKNWKRVRFDDDEGFMPEVEWMLDTEGVNL 3781
AEDDVFLKKIE NMLTEMALRGIPDINKVFIKN K +FD+++GF E EWMLDTEGVNL
Sbjct: 1274 AEDDVFLKKIEGNMLTEMALRGIPDINKVFIKNSKLNKFDENDGFKAENEWMLDTEGVNL 1333
Query: 3782 LAVICHEDVDATRTTSNHLIEVMEVLGIEAVRKSLLDELRVVISFDGSYVNYRHLAILCD 3961
LAV+CHE+VD RTTSNHLIEV+EVLGIEAVR+SLLDELRVVISFDGSYVNYRHLAILCD
Sbjct: 1334 LAVMCHEEVDVRRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAILCD 1393
Query: 3962 TMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDHLRGVTENIMLGQL 4141
TMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAV+AETD LRGVTENIMLGQL
Sbjct: 1394 TMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETDCLRGVTENIMLGQL 1453
Query: 4142 APIGTGDCALYLNDKMLEHAIDLQLPSYME-GLDFGMTPSRSPIMGTPYRDGMMSPNYML 4318
APIGTGDCAL LN++ML+ AI++ LPSYME GL+FGMTP RSP GTPY DGMMSPNY+L
Sbjct: 1454 APIGTGDCALLLNEQMLKQAIEIPLPSYMEGGLEFGMTPGRSPHSGTPYHDGMMSPNYLL 1513
Query: 4319 -SPNLRLSPTNDAQFSPYVGGMAF 4387
SPNLRLSP DAQFSPYVGGMAF
Sbjct: 1514 MSPNLRLSPVTDAQFSPYVGGMAF 1537
>ref|XP_006467031.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like isoform X5
[Citrus sinensis]
Length = 1963
Score = 2660 bits (6894), Expect = 0.0
Identities = 1299/1462 (88%), Positives = 1385/1462 (94%)
Frame = +2
Query: 2 AECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEDDHKFKLAQKVKNPKAR 181
AECPGHFGHLELAKPMFHIGFMKTVLSIMR VCFNCSKILADEDDHKFK A K++NPK R
Sbjct: 74 AECPGHFGHLELAKPMFHIGFMKTVLSIMRSVCFNCSKILADEDDHKFKQALKIRNPKNR 133
Query: 182 LKRILDACKNKTKCEGGDEIEGQGRDSEEPVKKARGGCGAQQPKLTIEGMKMIAEYKLQR 361
LK+ILDACKNKTKCEGGDEI+ G+D EEP+KK +GGCGAQQPKLTIEGMKMIAEYK QR
Sbjct: 134 LKKILDACKNKTKCEGGDEIDVPGQDGEEPLKKNKGGCGAQQPKLTIEGMKMIAEYKAQR 193
Query: 362 KKSDDQEQLPEPVERKQQLSAERVLSVLKRISDEDCNLLGLNPKYARPDWMILQVLXXXX 541
KK+DDQEQLPEPVERKQ L+AERVL VLKRISDEDC LLGLNPKYARPDWMILQVL
Sbjct: 194 KKNDDQEQLPEPVERKQTLTAERVLGVLKRISDEDCQLLGLNPKYARPDWMILQVLPIPP 253
Query: 542 XXXXXSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIISEFAQLLQFHVATY 721
SVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIISEFAQLLQFH+ATY
Sbjct: 254 PPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIISEFAQLLQFHIATY 313
Query: 722 FDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDQ 901
FDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDQ
Sbjct: 314 FDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDQ 373
Query: 902 LGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIREDGQRLDLRYLKK 1081
LGVPWSIALNLTYPETVTPYNIERLKELVE GPHPPPGKTGAKYIIR+DGQRLDLRYLKK
Sbjct: 374 LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLKK 433
Query: 1082 SSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNA 1261
SSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNA
Sbjct: 434 SSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNA 493
Query: 1262 DFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKITKRDTF 1441
DFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDTLLGCRKITKRDTF
Sbjct: 494 DFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTF 553
Query: 1442 IEKDVFMNILMWWEDFDGKVPAPTILKPRPLWTGKQVFNLIIPKQINLMRTSAWHSESET 1621
IEKDVFMNILMWWEDFDGKVP PTILKPRPLWTGKQVFNLIIPKQINL RT+AWH++++
Sbjct: 554 IEKDVFMNILMWWEDFDGKVPQPTILKPRPLWTGKQVFNLIIPKQINLFRTAAWHADNDK 613
Query: 1622 GFLTPGDTQVRIERGEVITGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNY 1801
G LT GDT VRIE+GE+++GTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNY
Sbjct: 614 GILTAGDTLVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNY 673
Query: 1802 WLLQQAFSIGIGDTIADASTMEKINETISKAKNEVKELIRAAQEKQLEAEPGRTMMDSFE 1981
WLLQ AFSIGIGDTIADA TME IN+TISKAKN VK LI+ AQ+K LE EPGRTMM+SFE
Sbjct: 674 WLLQNAFSIGIGDTIADAKTMETINDTISKAKNNVKNLIKQAQDKSLEPEPGRTMMESFE 733
Query: 1982 NRVNQVLNKARDDAGSSAQKSLAESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRI 2161
N+VNQVLN ARD+AGSSAQKSL+ESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRI
Sbjct: 734 NKVNQVLNTARDEAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRI 793
Query: 2162 PYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETG 2341
P+GF+DRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETG
Sbjct: 794 PFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETG 853
Query: 2342 YIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQRLDSLKMKKGEFNK 2521
YIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIESQ LDSLKMKK EF+K
Sbjct: 854 YIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQTLDSLKMKKSEFDK 913
Query: 2522 VYGYEFDDENWNPSYLLPEHVDDLQNIREFRNVFDAELKKLEEDRLQLGKDIVTTGDDVW 2701
+ +E D+ENWNP+Y+L E++DDL+ I+E R+VFDAE++KLE DR QL +I T+GD W
Sbjct: 914 AFRFEMDEENWNPNYMLQEYIDDLKTIKELRDVFDAEVQKLEADRYQLATEIATSGDSSW 973
Query: 2702 PMPVNLKRLIWNAQKTFKIDLRRPSGMHPMEIVEAVDKLQERLKVVHGDDPMSTEAQKNA 2881
P+PVNLKRLIWNAQKTFK+D RRPS MHPME+VEAVDKLQERLKVV G+DP+S EAQKNA
Sbjct: 974 PLPVNLKRLIWNAQKTFKVDPRRPSDMHPMEVVEAVDKLQERLKVVPGEDPLSVEAQKNA 1033
Query: 2882 TLFFNILLRSTLASKRVLKEYRLTKEAFEWVVGEIESRFLQSLVASGEMIGCVAAQSIGE 3061
TLFFNILLRST ASKRVLKE+RLT+EAFEWV+GEIESRFLQSLVA GEMIGCVAAQSIGE
Sbjct: 1034 TLFFNILLRSTFASKRVLKEHRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGE 1093
Query: 3062 PATQMTLNTFHFAGVSAKNVTLGVPRLREIINIAKKIKTPSLSVYLKPEVNKTKERAKNV 3241
PATQMTLNTFH+AGVSAKNVTLGVPRLREIIN+AKKIKTPSLSV+LKP VN TKERAKNV
Sbjct: 1094 PATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVFLKPGVNSTKERAKNV 1153
Query: 3242 QCALEYTTLRSVTQATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEEISPDKISPWLLRVE 3421
QCALEYTTLRSVT+ATEVWYDPDPM TIIEED++FVKSYYEMPDE+I+P+KISPWLLR+E
Sbjct: 1154 QCALEYTTLRSVTEATEVWYDPDPMGTIIEEDVEFVKSYYEMPDEDIAPEKISPWLLRIE 1213
Query: 3422 LNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGELNDES 3601
LNREMMVDKKLSMA +AEKIN EFDDDLTCIFNDDNA+KLILRIRIMNDEAPKGELNDES
Sbjct: 1214 LNREMMVDKKLSMAAVAEKINQEFDDDLTCIFNDDNADKLILRIRIMNDEAPKGELNDES 1273
Query: 3602 AEDDVFLKKIESNMLTEMALRGIPDINKVFIKNWKRVRFDDDEGFMPEVEWMLDTEGVNL 3781
AEDDVFLKKIESNMLTEMALRGIPDINKVFIK K ++DD+EGF E EWMLDTEGVNL
Sbjct: 1274 AEDDVFLKKIESNMLTEMALRGIPDINKVFIKKGKTTKYDDNEGFKSEDEWMLDTEGVNL 1333
Query: 3782 LAVICHEDVDATRTTSNHLIEVMEVLGIEAVRKSLLDELRVVISFDGSYVNYRHLAILCD 3961
LAV+CHEDVDA RTTSNHLIE++EVLGIEAVR++LLDELRVVISFDGSYVNYRHLAILCD
Sbjct: 1334 LAVMCHEDVDARRTTSNHLIEIIEVLGIEAVRRALLDELRVVISFDGSYVNYRHLAILCD 1393
Query: 3962 TMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDHLRGVTENIMLGQL 4141
TMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAV+AE+D+LRGVTENIMLGQL
Sbjct: 1394 TMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAESDYLRGVTENIMLGQL 1453
Query: 4142 APIGTGDCALYLNDKMLEHAIDLQLPSYMEGLDFGMTPSRSPIMGTPYRDGMMSPNYMLS 4321
APIGTGDC+LYLND+ML++AI+LQLPSYMEGL+FGMTP+RSP+ GTPY DGMMSP Y+ S
Sbjct: 1454 APIGTGDCSLYLNDEMLKNAIELQLPSYMEGLEFGMTPARSPVSGTPYHDGMMSPGYLFS 1513
Query: 4322 PNLRLSPTNDAQFSPYVGGMAF 4387
PNLRLSP DAQFSPYVGGMAF
Sbjct: 1514 PNLRLSPVTDAQFSPYVGGMAF 1535
>ref|XP_006467030.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like isoform X4
[Citrus sinensis]
Length = 1853
Score = 2660 bits (6894), Expect = 0.0
Identities = 1299/1462 (88%), Positives = 1385/1462 (94%)
Frame = +2
Query: 2 AECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEDDHKFKLAQKVKNPKAR 181
AECPGHFGHLELAKPMFHIGFMKTVLSIMR VCFNCSKILADEDDHKFK A K++NPK R
Sbjct: 74 AECPGHFGHLELAKPMFHIGFMKTVLSIMRSVCFNCSKILADEDDHKFKQALKIRNPKNR 133
Query: 182 LKRILDACKNKTKCEGGDEIEGQGRDSEEPVKKARGGCGAQQPKLTIEGMKMIAEYKLQR 361
LK+ILDACKNKTKCEGGDEI+ G+D EEP+KK +GGCGAQQPKLTIEGMKMIAEYK QR
Sbjct: 134 LKKILDACKNKTKCEGGDEIDVPGQDGEEPLKKNKGGCGAQQPKLTIEGMKMIAEYKAQR 193
Query: 362 KKSDDQEQLPEPVERKQQLSAERVLSVLKRISDEDCNLLGLNPKYARPDWMILQVLXXXX 541
KK+DDQEQLPEPVERKQ L+AERVL VLKRISDEDC LLGLNPKYARPDWMILQVL
Sbjct: 194 KKNDDQEQLPEPVERKQTLTAERVLGVLKRISDEDCQLLGLNPKYARPDWMILQVLPIPP 253
Query: 542 XXXXXSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIISEFAQLLQFHVATY 721
SVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIISEFAQLLQFH+ATY
Sbjct: 254 PPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIISEFAQLLQFHIATY 313
Query: 722 FDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDQ 901
FDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDQ
Sbjct: 314 FDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDQ 373
Query: 902 LGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIREDGQRLDLRYLKK 1081
LGVPWSIALNLTYPETVTPYNIERLKELVE GPHPPPGKTGAKYIIR+DGQRLDLRYLKK
Sbjct: 374 LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLKK 433
Query: 1082 SSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNA 1261
SSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNA
Sbjct: 434 SSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNA 493
Query: 1262 DFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKITKRDTF 1441
DFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDTLLGCRKITKRDTF
Sbjct: 494 DFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTF 553
Query: 1442 IEKDVFMNILMWWEDFDGKVPAPTILKPRPLWTGKQVFNLIIPKQINLMRTSAWHSESET 1621
IEKDVFMNILMWWEDFDGKVP PTILKPRPLWTGKQVFNLIIPKQINL RT+AWH++++
Sbjct: 554 IEKDVFMNILMWWEDFDGKVPQPTILKPRPLWTGKQVFNLIIPKQINLFRTAAWHADNDK 613
Query: 1622 GFLTPGDTQVRIERGEVITGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNY 1801
G LT GDT VRIE+GE+++GTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNY
Sbjct: 614 GILTAGDTLVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNY 673
Query: 1802 WLLQQAFSIGIGDTIADASTMEKINETISKAKNEVKELIRAAQEKQLEAEPGRTMMDSFE 1981
WLLQ AFSIGIGDTIADA TME IN+TISKAKN VK LI+ AQ+K LE EPGRTMM+SFE
Sbjct: 674 WLLQNAFSIGIGDTIADAKTMETINDTISKAKNNVKNLIKQAQDKSLEPEPGRTMMESFE 733
Query: 1982 NRVNQVLNKARDDAGSSAQKSLAESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRI 2161
N+VNQVLN ARD+AGSSAQKSL+ESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRI
Sbjct: 734 NKVNQVLNTARDEAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRI 793
Query: 2162 PYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETG 2341
P+GF+DRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETG
Sbjct: 794 PFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETG 853
Query: 2342 YIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQRLDSLKMKKGEFNK 2521
YIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIESQ LDSLKMKK EF+K
Sbjct: 854 YIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQTLDSLKMKKSEFDK 913
Query: 2522 VYGYEFDDENWNPSYLLPEHVDDLQNIREFRNVFDAELKKLEEDRLQLGKDIVTTGDDVW 2701
+ +E D+ENWNP+Y+L E++DDL+ I+E R+VFDAE++KLE DR QL +I T+GD W
Sbjct: 914 AFRFEMDEENWNPNYMLQEYIDDLKTIKELRDVFDAEVQKLEADRYQLATEIATSGDSSW 973
Query: 2702 PMPVNLKRLIWNAQKTFKIDLRRPSGMHPMEIVEAVDKLQERLKVVHGDDPMSTEAQKNA 2881
P+PVNLKRLIWNAQKTFK+D RRPS MHPME+VEAVDKLQERLKVV G+DP+S EAQKNA
Sbjct: 974 PLPVNLKRLIWNAQKTFKVDPRRPSDMHPMEVVEAVDKLQERLKVVPGEDPLSVEAQKNA 1033
Query: 2882 TLFFNILLRSTLASKRVLKEYRLTKEAFEWVVGEIESRFLQSLVASGEMIGCVAAQSIGE 3061
TLFFNILLRST ASKRVLKE+RLT+EAFEWV+GEIESRFLQSLVA GEMIGCVAAQSIGE
Sbjct: 1034 TLFFNILLRSTFASKRVLKEHRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGE 1093
Query: 3062 PATQMTLNTFHFAGVSAKNVTLGVPRLREIINIAKKIKTPSLSVYLKPEVNKTKERAKNV 3241
PATQMTLNTFH+AGVSAKNVTLGVPRLREIIN+AKKIKTPSLSV+LKP VN TKERAKNV
Sbjct: 1094 PATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVFLKPGVNSTKERAKNV 1153
Query: 3242 QCALEYTTLRSVTQATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEEISPDKISPWLLRVE 3421
QCALEYTTLRSVT+ATEVWYDPDPM TIIEED++FVKSYYEMPDE+I+P+KISPWLLR+E
Sbjct: 1154 QCALEYTTLRSVTEATEVWYDPDPMGTIIEEDVEFVKSYYEMPDEDIAPEKISPWLLRIE 1213
Query: 3422 LNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGELNDES 3601
LNREMMVDKKLSMA +AEKIN EFDDDLTCIFNDDNA+KLILRIRIMNDEAPKGELNDES
Sbjct: 1214 LNREMMVDKKLSMAAVAEKINQEFDDDLTCIFNDDNADKLILRIRIMNDEAPKGELNDES 1273
Query: 3602 AEDDVFLKKIESNMLTEMALRGIPDINKVFIKNWKRVRFDDDEGFMPEVEWMLDTEGVNL 3781
AEDDVFLKKIESNMLTEMALRGIPDINKVFIK K ++DD+EGF E EWMLDTEGVNL
Sbjct: 1274 AEDDVFLKKIESNMLTEMALRGIPDINKVFIKKGKTTKYDDNEGFKSEDEWMLDTEGVNL 1333
Query: 3782 LAVICHEDVDATRTTSNHLIEVMEVLGIEAVRKSLLDELRVVISFDGSYVNYRHLAILCD 3961
LAV+CHEDVDA RTTSNHLIE++EVLGIEAVR++LLDELRVVISFDGSYVNYRHLAILCD
Sbjct: 1334 LAVMCHEDVDARRTTSNHLIEIIEVLGIEAVRRALLDELRVVISFDGSYVNYRHLAILCD 1393
Query: 3962 TMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDHLRGVTENIMLGQL 4141
TMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAV+AE+D+LRGVTENIMLGQL
Sbjct: 1394 TMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAESDYLRGVTENIMLGQL 1453
Query: 4142 APIGTGDCALYLNDKMLEHAIDLQLPSYMEGLDFGMTPSRSPIMGTPYRDGMMSPNYMLS 4321
APIGTGDC+LYLND+ML++AI+LQLPSYMEGL+FGMTP+RSP+ GTPY DGMMSP Y+ S
Sbjct: 1454 APIGTGDCSLYLNDEMLKNAIELQLPSYMEGLEFGMTPARSPVSGTPYHDGMMSPGYLFS 1513
Query: 4322 PNLRLSPTNDAQFSPYVGGMAF 4387
PNLRLSP DAQFSPYVGGMAF
Sbjct: 1514 PNLRLSPVTDAQFSPYVGGMAF 1535
>ref|XP_006467029.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like isoform X3
[Citrus sinensis]
Length = 1790
Score = 2660 bits (6894), Expect = 0.0
Identities = 1299/1462 (88%), Positives = 1385/1462 (94%)
Frame = +2
Query: 2 AECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEDDHKFKLAQKVKNPKAR 181
AECPGHFGHLELAKPMFHIGFMKTVLSIMR VCFNCSKILADEDDHKFK A K++NPK R
Sbjct: 74 AECPGHFGHLELAKPMFHIGFMKTVLSIMRSVCFNCSKILADEDDHKFKQALKIRNPKNR 133
Query: 182 LKRILDACKNKTKCEGGDEIEGQGRDSEEPVKKARGGCGAQQPKLTIEGMKMIAEYKLQR 361
LK+ILDACKNKTKCEGGDEI+ G+D EEP+KK +GGCGAQQPKLTIEGMKMIAEYK QR
Sbjct: 134 LKKILDACKNKTKCEGGDEIDVPGQDGEEPLKKNKGGCGAQQPKLTIEGMKMIAEYKAQR 193
Query: 362 KKSDDQEQLPEPVERKQQLSAERVLSVLKRISDEDCNLLGLNPKYARPDWMILQVLXXXX 541
KK+DDQEQLPEPVERKQ L+AERVL VLKRISDEDC LLGLNPKYARPDWMILQVL
Sbjct: 194 KKNDDQEQLPEPVERKQTLTAERVLGVLKRISDEDCQLLGLNPKYARPDWMILQVLPIPP 253
Query: 542 XXXXXSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIISEFAQLLQFHVATY 721
SVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIISEFAQLLQFH+ATY
Sbjct: 254 PPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIISEFAQLLQFHIATY 313
Query: 722 FDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDQ 901
FDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDQ
Sbjct: 314 FDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDQ 373
Query: 902 LGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIREDGQRLDLRYLKK 1081
LGVPWSIALNLTYPETVTPYNIERLKELVE GPHPPPGKTGAKYIIR+DGQRLDLRYLKK
Sbjct: 374 LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLKK 433
Query: 1082 SSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNA 1261
SSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNA
Sbjct: 434 SSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNA 493
Query: 1262 DFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKITKRDTF 1441
DFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDTLLGCRKITKRDTF
Sbjct: 494 DFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTF 553
Query: 1442 IEKDVFMNILMWWEDFDGKVPAPTILKPRPLWTGKQVFNLIIPKQINLMRTSAWHSESET 1621
IEKDVFMNILMWWEDFDGKVP PTILKPRPLWTGKQVFNLIIPKQINL RT+AWH++++
Sbjct: 554 IEKDVFMNILMWWEDFDGKVPQPTILKPRPLWTGKQVFNLIIPKQINLFRTAAWHADNDK 613
Query: 1622 GFLTPGDTQVRIERGEVITGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNY 1801
G LT GDT VRIE+GE+++GTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNY
Sbjct: 614 GILTAGDTLVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNY 673
Query: 1802 WLLQQAFSIGIGDTIADASTMEKINETISKAKNEVKELIRAAQEKQLEAEPGRTMMDSFE 1981
WLLQ AFSIGIGDTIADA TME IN+TISKAKN VK LI+ AQ+K LE EPGRTMM+SFE
Sbjct: 674 WLLQNAFSIGIGDTIADAKTMETINDTISKAKNNVKNLIKQAQDKSLEPEPGRTMMESFE 733
Query: 1982 NRVNQVLNKARDDAGSSAQKSLAESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRI 2161
N+VNQVLN ARD+AGSSAQKSL+ESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRI
Sbjct: 734 NKVNQVLNTARDEAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRI 793
Query: 2162 PYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETG 2341
P+GF+DRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETG
Sbjct: 794 PFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETG 853
Query: 2342 YIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQRLDSLKMKKGEFNK 2521
YIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIESQ LDSLKMKK EF+K
Sbjct: 854 YIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQTLDSLKMKKSEFDK 913
Query: 2522 VYGYEFDDENWNPSYLLPEHVDDLQNIREFRNVFDAELKKLEEDRLQLGKDIVTTGDDVW 2701
+ +E D+ENWNP+Y+L E++DDL+ I+E R+VFDAE++KLE DR QL +I T+GD W
Sbjct: 914 AFRFEMDEENWNPNYMLQEYIDDLKTIKELRDVFDAEVQKLEADRYQLATEIATSGDSSW 973
Query: 2702 PMPVNLKRLIWNAQKTFKIDLRRPSGMHPMEIVEAVDKLQERLKVVHGDDPMSTEAQKNA 2881
P+PVNLKRLIWNAQKTFK+D RRPS MHPME+VEAVDKLQERLKVV G+DP+S EAQKNA
Sbjct: 974 PLPVNLKRLIWNAQKTFKVDPRRPSDMHPMEVVEAVDKLQERLKVVPGEDPLSVEAQKNA 1033
Query: 2882 TLFFNILLRSTLASKRVLKEYRLTKEAFEWVVGEIESRFLQSLVASGEMIGCVAAQSIGE 3061
TLFFNILLRST ASKRVLKE+RLT+EAFEWV+GEIESRFLQSLVA GEMIGCVAAQSIGE
Sbjct: 1034 TLFFNILLRSTFASKRVLKEHRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGE 1093
Query: 3062 PATQMTLNTFHFAGVSAKNVTLGVPRLREIINIAKKIKTPSLSVYLKPEVNKTKERAKNV 3241
PATQMTLNTFH+AGVSAKNVTLGVPRLREIIN+AKKIKTPSLSV+LKP VN TKERAKNV
Sbjct: 1094 PATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVFLKPGVNSTKERAKNV 1153
Query: 3242 QCALEYTTLRSVTQATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEEISPDKISPWLLRVE 3421
QCALEYTTLRSVT+ATEVWYDPDPM TIIEED++FVKSYYEMPDE+I+P+KISPWLLR+E
Sbjct: 1154 QCALEYTTLRSVTEATEVWYDPDPMGTIIEEDVEFVKSYYEMPDEDIAPEKISPWLLRIE 1213
Query: 3422 LNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGELNDES 3601
LNREMMVDKKLSMA +AEKIN EFDDDLTCIFNDDNA+KLILRIRIMNDEAPKGELNDES
Sbjct: 1214 LNREMMVDKKLSMAAVAEKINQEFDDDLTCIFNDDNADKLILRIRIMNDEAPKGELNDES 1273
Query: 3602 AEDDVFLKKIESNMLTEMALRGIPDINKVFIKNWKRVRFDDDEGFMPEVEWMLDTEGVNL 3781
AEDDVFLKKIESNMLTEMALRGIPDINKVFIK K ++DD+EGF E EWMLDTEGVNL
Sbjct: 1274 AEDDVFLKKIESNMLTEMALRGIPDINKVFIKKGKTTKYDDNEGFKSEDEWMLDTEGVNL 1333
Query: 3782 LAVICHEDVDATRTTSNHLIEVMEVLGIEAVRKSLLDELRVVISFDGSYVNYRHLAILCD 3961
LAV+CHEDVDA RTTSNHLIE++EVLGIEAVR++LLDELRVVISFDGSYVNYRHLAILCD
Sbjct: 1334 LAVMCHEDVDARRTTSNHLIEIIEVLGIEAVRRALLDELRVVISFDGSYVNYRHLAILCD 1393
Query: 3962 TMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDHLRGVTENIMLGQL 4141
TMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAV+AE+D+LRGVTENIMLGQL
Sbjct: 1394 TMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAESDYLRGVTENIMLGQL 1453
Query: 4142 APIGTGDCALYLNDKMLEHAIDLQLPSYMEGLDFGMTPSRSPIMGTPYRDGMMSPNYMLS 4321
APIGTGDC+LYLND+ML++AI+LQLPSYMEGL+FGMTP+RSP+ GTPY DGMMSP Y+ S
Sbjct: 1454 APIGTGDCSLYLNDEMLKNAIELQLPSYMEGLEFGMTPARSPVSGTPYHDGMMSPGYLFS 1513
Query: 4322 PNLRLSPTNDAQFSPYVGGMAF 4387
PNLRLSP DAQFSPYVGGMAF
Sbjct: 1514 PNLRLSPVTDAQFSPYVGGMAF 1535
>ref|XP_006467027.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like isoform X1
[Citrus sinensis] gi|568825318|ref|XP_006467028.1|
PREDICTED: DNA-directed RNA polymerase II subunit 1-like
isoform X2 [Citrus sinensis]
Length = 1860
Score = 2660 bits (6894), Expect = 0.0
Identities = 1299/1462 (88%), Positives = 1385/1462 (94%)
Frame = +2
Query: 2 AECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEDDHKFKLAQKVKNPKAR 181
AECPGHFGHLELAKPMFHIGFMKTVLSIMR VCFNCSKILADEDDHKFK A K++NPK R
Sbjct: 74 AECPGHFGHLELAKPMFHIGFMKTVLSIMRSVCFNCSKILADEDDHKFKQALKIRNPKNR 133
Query: 182 LKRILDACKNKTKCEGGDEIEGQGRDSEEPVKKARGGCGAQQPKLTIEGMKMIAEYKLQR 361
LK+ILDACKNKTKCEGGDEI+ G+D EEP+KK +GGCGAQQPKLTIEGMKMIAEYK QR
Sbjct: 134 LKKILDACKNKTKCEGGDEIDVPGQDGEEPLKKNKGGCGAQQPKLTIEGMKMIAEYKAQR 193
Query: 362 KKSDDQEQLPEPVERKQQLSAERVLSVLKRISDEDCNLLGLNPKYARPDWMILQVLXXXX 541
KK+DDQEQLPEPVERKQ L+AERVL VLKRISDEDC LLGLNPKYARPDWMILQVL
Sbjct: 194 KKNDDQEQLPEPVERKQTLTAERVLGVLKRISDEDCQLLGLNPKYARPDWMILQVLPIPP 253
Query: 542 XXXXXSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIISEFAQLLQFHVATY 721
SVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIISEFAQLLQFH+ATY
Sbjct: 254 PPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIISEFAQLLQFHIATY 313
Query: 722 FDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDQ 901
FDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDQ
Sbjct: 314 FDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDQ 373
Query: 902 LGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIREDGQRLDLRYLKK 1081
LGVPWSIALNLTYPETVTPYNIERLKELVE GPHPPPGKTGAKYIIR+DGQRLDLRYLKK
Sbjct: 374 LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLKK 433
Query: 1082 SSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNA 1261
SSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNA
Sbjct: 434 SSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNA 493
Query: 1262 DFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKITKRDTF 1441
DFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDTLLGCRKITKRDTF
Sbjct: 494 DFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTF 553
Query: 1442 IEKDVFMNILMWWEDFDGKVPAPTILKPRPLWTGKQVFNLIIPKQINLMRTSAWHSESET 1621
IEKDVFMNILMWWEDFDGKVP PTILKPRPLWTGKQVFNLIIPKQINL RT+AWH++++
Sbjct: 554 IEKDVFMNILMWWEDFDGKVPQPTILKPRPLWTGKQVFNLIIPKQINLFRTAAWHADNDK 613
Query: 1622 GFLTPGDTQVRIERGEVITGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNY 1801
G LT GDT VRIE+GE+++GTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNY
Sbjct: 614 GILTAGDTLVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNY 673
Query: 1802 WLLQQAFSIGIGDTIADASTMEKINETISKAKNEVKELIRAAQEKQLEAEPGRTMMDSFE 1981
WLLQ AFSIGIGDTIADA TME IN+TISKAKN VK LI+ AQ+K LE EPGRTMM+SFE
Sbjct: 674 WLLQNAFSIGIGDTIADAKTMETINDTISKAKNNVKNLIKQAQDKSLEPEPGRTMMESFE 733
Query: 1982 NRVNQVLNKARDDAGSSAQKSLAESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRI 2161
N+VNQVLN ARD+AGSSAQKSL+ESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRI
Sbjct: 734 NKVNQVLNTARDEAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRI 793
Query: 2162 PYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETG 2341
P+GF+DRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETG
Sbjct: 794 PFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETG 853
Query: 2342 YIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQRLDSLKMKKGEFNK 2521
YIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIESQ LDSLKMKK EF+K
Sbjct: 854 YIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQTLDSLKMKKSEFDK 913
Query: 2522 VYGYEFDDENWNPSYLLPEHVDDLQNIREFRNVFDAELKKLEEDRLQLGKDIVTTGDDVW 2701
+ +E D+ENWNP+Y+L E++DDL+ I+E R+VFDAE++KLE DR QL +I T+GD W
Sbjct: 914 AFRFEMDEENWNPNYMLQEYIDDLKTIKELRDVFDAEVQKLEADRYQLATEIATSGDSSW 973
Query: 2702 PMPVNLKRLIWNAQKTFKIDLRRPSGMHPMEIVEAVDKLQERLKVVHGDDPMSTEAQKNA 2881
P+PVNLKRLIWNAQKTFK+D RRPS MHPME+VEAVDKLQERLKVV G+DP+S EAQKNA
Sbjct: 974 PLPVNLKRLIWNAQKTFKVDPRRPSDMHPMEVVEAVDKLQERLKVVPGEDPLSVEAQKNA 1033
Query: 2882 TLFFNILLRSTLASKRVLKEYRLTKEAFEWVVGEIESRFLQSLVASGEMIGCVAAQSIGE 3061
TLFFNILLRST ASKRVLKE+RLT+EAFEWV+GEIESRFLQSLVA GEMIGCVAAQSIGE
Sbjct: 1034 TLFFNILLRSTFASKRVLKEHRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGE 1093
Query: 3062 PATQMTLNTFHFAGVSAKNVTLGVPRLREIINIAKKIKTPSLSVYLKPEVNKTKERAKNV 3241
PATQMTLNTFH+AGVSAKNVTLGVPRLREIIN+AKKIKTPSLSV+LKP VN TKERAKNV
Sbjct: 1094 PATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVFLKPGVNSTKERAKNV 1153
Query: 3242 QCALEYTTLRSVTQATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEEISPDKISPWLLRVE 3421
QCALEYTTLRSVT+ATEVWYDPDPM TIIEED++FVKSYYEMPDE+I+P+KISPWLLR+E
Sbjct: 1154 QCALEYTTLRSVTEATEVWYDPDPMGTIIEEDVEFVKSYYEMPDEDIAPEKISPWLLRIE 1213
Query: 3422 LNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGELNDES 3601
LNREMMVDKKLSMA +AEKIN EFDDDLTCIFNDDNA+KLILRIRIMNDEAPKGELNDES
Sbjct: 1214 LNREMMVDKKLSMAAVAEKINQEFDDDLTCIFNDDNADKLILRIRIMNDEAPKGELNDES 1273
Query: 3602 AEDDVFLKKIESNMLTEMALRGIPDINKVFIKNWKRVRFDDDEGFMPEVEWMLDTEGVNL 3781
AEDDVFLKKIESNMLTEMALRGIPDINKVFIK K ++DD+EGF E EWMLDTEGVNL
Sbjct: 1274 AEDDVFLKKIESNMLTEMALRGIPDINKVFIKKGKTTKYDDNEGFKSEDEWMLDTEGVNL 1333
Query: 3782 LAVICHEDVDATRTTSNHLIEVMEVLGIEAVRKSLLDELRVVISFDGSYVNYRHLAILCD 3961
LAV+CHEDVDA RTTSNHLIE++EVLGIEAVR++LLDELRVVISFDGSYVNYRHLAILCD
Sbjct: 1334 LAVMCHEDVDARRTTSNHLIEIIEVLGIEAVRRALLDELRVVISFDGSYVNYRHLAILCD 1393
Query: 3962 TMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDHLRGVTENIMLGQL 4141
TMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAV+AE+D+LRGVTENIMLGQL
Sbjct: 1394 TMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAESDYLRGVTENIMLGQL 1453
Query: 4142 APIGTGDCALYLNDKMLEHAIDLQLPSYMEGLDFGMTPSRSPIMGTPYRDGMMSPNYMLS 4321
APIGTGDC+LYLND+ML++AI+LQLPSYMEGL+FGMTP+RSP+ GTPY DGMMSP Y+ S
Sbjct: 1454 APIGTGDCSLYLNDEMLKNAIELQLPSYMEGLEFGMTPARSPVSGTPYHDGMMSPGYLFS 1513
Query: 4322 PNLRLSPTNDAQFSPYVGGMAF 4387
PNLRLSP DAQFSPYVGGMAF
Sbjct: 1514 PNLRLSPVTDAQFSPYVGGMAF 1535
>ref|XP_007046584.1| DNA-directed RNA polymerase II subunit RPB1 isoform 1 [Theobroma
cacao] gi|590702281|ref|XP_007046585.1| DNA-directed RNA
polymerase II subunit RPB1 isoform 1 [Theobroma cacao]
gi|590702285|ref|XP_007046586.1| DNA-directed RNA
polymerase II subunit RPB1 isoform 1 [Theobroma cacao]
gi|508698845|gb|EOX90741.1| DNA-directed RNA polymerase
II subunit RPB1 isoform 1 [Theobroma cacao]
gi|508698846|gb|EOX90742.1| DNA-directed RNA polymerase
II subunit RPB1 isoform 1 [Theobroma cacao]
gi|508698847|gb|EOX90743.1| DNA-directed RNA polymerase
II subunit RPB1 isoform 1 [Theobroma cacao]
Length = 1861
Score = 2660 bits (6894), Expect = 0.0
Identities = 1303/1463 (89%), Positives = 1393/1463 (95%), Gaps = 1/1463 (0%)
Frame = +2
Query: 2 AECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEDDHKFKLAQKVKNPKAR 181
AECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADE++HKFK A K+KNPK R
Sbjct: 74 AECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEEEHKFKQALKIKNPKNR 133
Query: 182 LKRILDACKNKTKCEGGDEIEGQGRDSEEPVKKARGGCGAQQPKLTIEGMKMIAEYKLQR 361
LK+ILDACKNK+KCEGGDEI+ QG+D+EEPVKK+RGGCGAQQPKL+I+GMKMIAEYK QR
Sbjct: 134 LKKILDACKNKSKCEGGDEIDVQGQDTEEPVKKSRGGCGAQQPKLSIDGMKMIAEYKPQR 193
Query: 362 KKSDDQEQLPEPVERKQQLSAERVLSVLKRISDEDCNLLGLNPKYARPDWMILQVLXXXX 541
K++DDQEQLPEPVERKQ L+AERVLSVLKRISDEDC LLGLNPK+ARPDWMILQVL
Sbjct: 194 KRNDDQEQLPEPVERKQTLTAERVLSVLKRISDEDCQLLGLNPKFARPDWMILQVLPIPP 253
Query: 542 XXXXXSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIISEFAQLLQFHVATY 721
SVMMDTSSRSEDDLTH LAMIIRHNENLRRQERNG+PAHIISEFAQLLQFHVATY
Sbjct: 254 PPVRPSVMMDTSSRSEDDLTHALAMIIRHNENLRRQERNGSPAHIISEFAQLLQFHVATY 313
Query: 722 FDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDQ 901
FDNELPG PRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDP INID+
Sbjct: 314 FDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPNINIDE 373
Query: 902 LGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIREDGQRLDLRYLKK 1081
LGVPWSIALNLTYPETVTPYNIERLKELVE GPHPPPGKTGAKYIIR+DGQRLDLRYLKK
Sbjct: 374 LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLKK 433
Query: 1082 SSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNA 1261
SSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRI+IMPYSTFRLNLSVTSPYNA
Sbjct: 434 SSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIRIMPYSTFRLNLSVTSPYNA 493
Query: 1262 DFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKITKRDTF 1441
DFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDTLLGCRKITKRDTF
Sbjct: 494 DFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTF 553
Query: 1442 IEKDVFMNILMWWEDFDGKVPAPTILKPRPLWTGKQVFNLIIPKQINLMRTSAWHSESET 1621
IEKDVFMNILMWWEDFDGKVPAP ILKPRPLWTGKQVFNLIIPKQINL+R SAWHSE+ET
Sbjct: 554 IEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQINLLRNSAWHSETET 613
Query: 1622 GFLTPGDTQVRIERGEVITGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNY 1801
GF+TPGDTQVRIE+GE+++GTLCKK LGTS+GSLIHVIWEEVGPDAARKFLGHTQWLVNY
Sbjct: 614 GFITPGDTQVRIEKGELLSGTLCKKALGTSSGSLIHVIWEEVGPDAARKFLGHTQWLVNY 673
Query: 1802 WLLQQAFSIGIGDTIADASTMEKINETISKAKNEVKELIRAAQEKQLEAEPGRTMMDSFE 1981
WLLQ AFSIGIGDTIADA+TMEKINETISKAK EVK LI AQ K LE EPGRTMM+SFE
Sbjct: 674 WLLQNAFSIGIGDTIADAATMEKINETISKAKEEVKNLIVKAQNKDLEPEPGRTMMESFE 733
Query: 1982 NRVNQVLNKARDDAGSSAQKSLAESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRI 2161
N+VNQVLNKARDDAG+SAQKSL+ESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRI
Sbjct: 734 NKVNQVLNKARDDAGNSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRI 793
Query: 2162 PYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETG 2341
P+GFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETG
Sbjct: 794 PFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETG 853
Query: 2342 YIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQRLDSLKMKKGEFNK 2521
YIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIESQ+LDSLKMKK EF++
Sbjct: 854 YIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQKLDSLKMKKSEFDR 913
Query: 2522 VYGYEFDDENWNP-SYLLPEHVDDLQNIREFRNVFDAELKKLEEDRLQLGKDIVTTGDDV 2698
V+ Y DDE+WNP SY+LPEH++DL+ I+E R+VF+AE++KL+ DR QLG +I TGD
Sbjct: 914 VFRYNIDDESWNPTSYMLPEHIEDLRTIQELRDVFEAEVQKLDADRYQLGTEIAVTGDSN 973
Query: 2699 WPMPVNLKRLIWNAQKTFKIDLRRPSGMHPMEIVEAVDKLQERLKVVHGDDPMSTEAQKN 2878
WP+PVNLKRLIWNAQKTFK+D RR S +HP+EIV++VDKLQERLKVV G DP+S EAQKN
Sbjct: 974 WPLPVNLKRLIWNAQKTFKVDFRRVSDLHPVEIVDSVDKLQERLKVVPGTDPLSVEAQKN 1033
Query: 2879 ATLFFNILLRSTLASKRVLKEYRLTKEAFEWVVGEIESRFLQSLVASGEMIGCVAAQSIG 3058
ATLFF+ILLRSTLASKRVL+EYRLTKEAFEWV+GEIESRFLQSLVA GEMIGCVAAQSIG
Sbjct: 1034 ATLFFSILLRSTLASKRVLQEYRLTKEAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIG 1093
Query: 3059 EPATQMTLNTFHFAGVSAKNVTLGVPRLREIINIAKKIKTPSLSVYLKPEVNKTKERAKN 3238
EPATQMTLNTFH+AGVSAKNVTLGVPRLREIIN+AKKIKTPSLSVYL PE +KTKE+AKN
Sbjct: 1094 EPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLSPEASKTKEKAKN 1153
Query: 3239 VQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEEISPDKISPWLLRV 3418
VQCALEYTTLRSVT ATEVWYDPDP STIIEEDIDFVKSYYEMPDEE++P+KISPWLLR+
Sbjct: 1154 VQCALEYTTLRSVTHATEVWYDPDPTSTIIEEDIDFVKSYYEMPDEEVAPEKISPWLLRI 1213
Query: 3419 ELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGELNDE 3598
ELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDE PKGELNDE
Sbjct: 1214 ELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEGPKGELNDE 1273
Query: 3599 SAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNWKRVRFDDDEGFMPEVEWMLDTEGVN 3778
SAEDDVFLKKIESNMLTEMALRGIPDINKVFIK+ K +FD+ +G+ EW+LDTEGVN
Sbjct: 1274 SAEDDVFLKKIESNMLTEMALRGIPDINKVFIKHSKASKFDEADGYKTGEEWVLDTEGVN 1333
Query: 3779 LLAVICHEDVDATRTTSNHLIEVMEVLGIEAVRKSLLDELRVVISFDGSYVNYRHLAILC 3958
LLAV+CHEDVDA RTTSNHLIEV+EVLGIEAVR+SLLDELRVVISFDGSYVNYRHLAILC
Sbjct: 1334 LLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAILC 1393
Query: 3959 DTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDHLRGVTENIMLGQ 4138
DTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAE+D+LRGVTENIMLGQ
Sbjct: 1394 DTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAESDYLRGVTENIMLGQ 1453
Query: 4139 LAPIGTGDCALYLNDKMLEHAIDLQLPSYMEGLDFGMTPSRSPIMGTPYRDGMMSPNYML 4318
LAPIGTGDCALYLND+ML++AI+LQLPSYMEGL+FGMTP+RSP+ GTPY +GMMSP+Y+L
Sbjct: 1454 LAPIGTGDCALYLNDEMLKNAIELQLPSYMEGLEFGMTPARSPVSGTPYHEGMMSPSYLL 1513
Query: 4319 SPNLRLSPTNDAQFSPYVGGMAF 4387
SPNLRLSP DAQFSPYVGGMAF
Sbjct: 1514 SPNLRLSPITDAQFSPYVGGMAF 1536
>ref|XP_004232527.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB1 [Solanum
lycopersicum]
Length = 1846
Score = 2660 bits (6894), Expect = 0.0
Identities = 1307/1463 (89%), Positives = 1394/1463 (95%), Gaps = 1/1463 (0%)
Frame = +2
Query: 2 AECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEDDHKFKLAQKVKNPKAR 181
AECPGHFGHLELAKPMFHIGFMK VLSI+RCVCFNCSKILADEDD KFK A +++NPK R
Sbjct: 74 AECPGHFGHLELAKPMFHIGFMKPVLSILRCVCFNCSKILADEDDPKFKQAMRIRNPKNR 133
Query: 182 LKRILDACKNKTKCEGGDEIEGQGRDSEEPVKKARGGCGAQQPKLTIEGMKMIAEYKLQR 361
L+++LDACKNKTKCEGGDEI+ QG+D+EEPVKK+RGGCGAQQPK++I+GMKM+AEYK+Q+
Sbjct: 134 LRKMLDACKNKTKCEGGDEIDVQGQDTEEPVKKSRGGCGAQQPKISIDGMKMVAEYKMQK 193
Query: 362 KKSDDQEQLPEPVERKQQLSAERVLSVLKRISDEDCNLLGLNPKYARPDWMILQVLXXXX 541
KKSDD EQ+PEPVERKQQLSAERVLS+LKR+SDEDC LLGLNP++ARPDWMILQ L
Sbjct: 194 KKSDDPEQMPEPVERKQQLSAERVLSILKRVSDEDCLLLGLNPEFARPDWMILQALPIPP 253
Query: 542 XXXXXSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIISEFAQLLQFHVATY 721
SVMMDTSSRSEDDLTHQLAMIIRHNENL+RQERNGAPAHIISEFAQLLQFH+ATY
Sbjct: 254 PPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIISEFAQLLQFHIATY 313
Query: 722 FDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDQ 901
FDN+LPGQPRATQRSGRPIKSICSRLK+KEGRIRGNLMGKRVDFSARTVITPDPTINIDQ
Sbjct: 314 FDNDLPGQPRATQRSGRPIKSICSRLKSKEGRIRGNLMGKRVDFSARTVITPDPTINIDQ 373
Query: 902 LGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIREDGQRLDLRYLKK 1081
LGVPWSIALNLTYPETVTPYNIERLKELVE GPHPPPGKTGAKYIIR+DGQRLDLRYLKK
Sbjct: 374 LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLKK 433
Query: 1082 SSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNA 1261
SSD HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNA
Sbjct: 434 SSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNA 493
Query: 1262 DFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKITKRDTF 1441
DFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRK+TKRDTF
Sbjct: 494 DFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKVTKRDTF 553
Query: 1442 IEKDVFMNILMWWEDFDGKVPAPTILKPRPLWTGKQVFNLIIPKQINLMRTSAWHSESET 1621
IEKDVFMNILMWWEDFDGKVPAP ILKPRPLWTGKQVFNLIIPKQINL+R SAWH++SE
Sbjct: 554 IEKDVFMNILMWWEDFDGKVPAPVILKPRPLWTGKQVFNLIIPKQINLLRYSAWHNDSEK 613
Query: 1622 GFLTPGDTQVRIERGEVITGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNY 1801
G++TPGDTQVRIE+GE+++GTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNY
Sbjct: 614 GYITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNY 673
Query: 1802 WLLQQAFSIGIGDTIADASTMEKINETISKAKNEVKELIRAAQEKQLEAEPGRTMMDSFE 1981
WLLQQAFSIGIGDTIADASTMEKINETIS AK +VKELI+AAQEK LEAEPGRTMM+SFE
Sbjct: 674 WLLQQAFSIGIGDTIADASTMEKINETISNAKAKVKELIKAAQEKLLEAEPGRTMMESFE 733
Query: 1982 NRVNQVLNKARDDAGSSAQKSLAESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRI 2161
NRVNQVLNKARDDAGSSA+KSL+ESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRI
Sbjct: 734 NRVNQVLNKARDDAGSSAEKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRI 793
Query: 2162 PYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETG 2341
P+GFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETG
Sbjct: 794 PFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETG 853
Query: 2342 YIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQRLDSLKMKKGEFNK 2521
YIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIE+Q+LDSLK KKG F+
Sbjct: 854 YIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIETQKLDSLKAKKGTFDD 913
Query: 2522 VYGYEFDDENWNPSYLLPEHVDDLQNIREFRNVFDAELKKLEEDRLQLGKDIVTTGDDVW 2701
+Y YE DD NWNPSY+LPE V+DL+ IRE R+VFDAE++KLE DR QLG +I TGD+ W
Sbjct: 914 MYAYEIDDPNWNPSYMLPEAVEDLKGIREIRSVFDAEVQKLEADRHQLGTEIAVTGDNSW 973
Query: 2702 PMPVNLKRLIWNAQKTFKIDLRRPSGMHPMEIVEAVDKLQERLKVVHGDDPMSTEAQKNA 2881
P+PVN++RL+ NAQKTFKID RRPS MHPMEIVEAVDKLQERLKVV GDD +S EAQKNA
Sbjct: 974 PLPVNIQRLVLNAQKTFKIDFRRPSDMHPMEIVEAVDKLQERLKVVPGDDYLSMEAQKNA 1033
Query: 2882 TLFFNILLRSTLASKRVLKEYRLTKEAFEWVVGEIESRFLQSLVASGEMIGCVAAQSIGE 3061
TLFFNILLRS LASKRVLKEYRL++EAFEWVVGEIESRFLQSLVA GEMIGCVAAQSIGE
Sbjct: 1034 TLFFNILLRSALASKRVLKEYRLSREAFEWVVGEIESRFLQSLVAPGEMIGCVAAQSIGE 1093
Query: 3062 PATQMTLNTFHFAGVSAKNVTLGVPRLREIINIAKKIKTPSLSVYLKPEVNKTKERAKNV 3241
PATQMTLNTFH+AGVSAKNVTLGVPRLREIIN+AKKIKTPSLSVYLKPEV KTKERAK V
Sbjct: 1094 PATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKPEVGKTKERAKTV 1153
Query: 3242 QCALEYTTLRSVTQATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEEISPDKISPWLLRVE 3421
QCALEYTTLRSVTQATEVWYDPDPMST+IEED++FVKSYYEMPDEEI PDKISPWLLR+E
Sbjct: 1154 QCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEIDPDKISPWLLRIE 1213
Query: 3422 LNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGELNDES 3601
LNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGEL DES
Sbjct: 1214 LNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGEL-DES 1272
Query: 3602 AEDDVFLKKIESNMLTEMALRGIPDINKVFIKNWKRVRFDDDEGFMPEVEWMLDTEGVNL 3781
AEDDVFLKKIESNMLTEMALRGIPDINKVFIKN K +FDD+EGF E EWMLDTEGVNL
Sbjct: 1273 AEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKVQKFDDNEGFKAENEWMLDTEGVNL 1332
Query: 3782 LAVICHEDVDATRTTSNHLIEVMEVLGIEAVRKSLLDELRVVISFDGSYVNYRHLAILCD 3961
LAV+ HEDVDA+RTTSNHLIEV+EVLGIEAVR+SLLDELRVVISFDGSYVNYRHLAILCD
Sbjct: 1333 LAVMTHEDVDASRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAILCD 1392
Query: 3962 TMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDHLRGVTENIMLGQL 4141
TMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAV+AE+DHLRGVTENIMLGQL
Sbjct: 1393 TMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAESDHLRGVTENIMLGQL 1452
Query: 4142 APIGTGDCALYLNDKMLEHAIDLQLPSYME-GLDFGMTPSRSPIMGTPYRDGMMSPNYML 4318
APIGTG C+LYLN++ML+ AI++ LPSYME GL+FGMTP RSPI GTPY DGMMSPNY+L
Sbjct: 1453 APIGTGGCSLYLNEEMLKQAIEIPLPSYMEGGLEFGMTPGRSPISGTPYHDGMMSPNYLL 1512
Query: 4319 SPNLRLSPTNDAQFSPYVGGMAF 4387
SPN+R+SP DAQFSPYVGGMAF
Sbjct: 1513 SPNMRMSPITDAQFSPYVGGMAF 1535
>ref|XP_006340787.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like [Solanum
tuberosum]
Length = 1839
Score = 2659 bits (6891), Expect = 0.0
Identities = 1306/1463 (89%), Positives = 1393/1463 (95%), Gaps = 1/1463 (0%)
Frame = +2
Query: 2 AECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEDDHKFKLAQKVKNPKAR 181
AECPGHFGHLELAKPMFHIGFMK VLSI+RCVCFNCSKILADEDD KFK A +++NPK R
Sbjct: 74 AECPGHFGHLELAKPMFHIGFMKPVLSILRCVCFNCSKILADEDDPKFKQAMRIRNPKNR 133
Query: 182 LKRILDACKNKTKCEGGDEIEGQGRDSEEPVKKARGGCGAQQPKLTIEGMKMIAEYKLQR 361
L+++LDACKNKTKCEGGDEI+ QG D+EEPVKK+RGGCGAQQPK++I+GMKM+AEYK+Q+
Sbjct: 134 LRKMLDACKNKTKCEGGDEIDVQGHDTEEPVKKSRGGCGAQQPKISIDGMKMVAEYKMQK 193
Query: 362 KKSDDQEQLPEPVERKQQLSAERVLSVLKRISDEDCNLLGLNPKYARPDWMILQVLXXXX 541
KKSDD EQ+PEPVERKQQLSAERVLS+LKR+SDEDC LLGLNP++ARPDWMILQ L
Sbjct: 194 KKSDDPEQMPEPVERKQQLSAERVLSILKRVSDEDCLLLGLNPEFARPDWMILQALPIPP 253
Query: 542 XXXXXSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIISEFAQLLQFHVATY 721
SVMMDTSSRSEDDLTHQLAMIIRHNENL+RQERNGAPAHIISEFAQLLQFH+ATY
Sbjct: 254 PPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIISEFAQLLQFHIATY 313
Query: 722 FDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDQ 901
FDN+LPGQPRATQRSGRPIKSICSRLK+KEGRIRGNLMGKRVDFSARTVITPDPTINIDQ
Sbjct: 314 FDNDLPGQPRATQRSGRPIKSICSRLKSKEGRIRGNLMGKRVDFSARTVITPDPTINIDQ 373
Query: 902 LGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIREDGQRLDLRYLKK 1081
LGVPWSIALNLTYPETVTPYNIERLKELVE GPHPPPGKTGAKYIIR+DGQRLDLRYLKK
Sbjct: 374 LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLKK 433
Query: 1082 SSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNA 1261
SSD HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNA
Sbjct: 434 SSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNA 493
Query: 1262 DFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKITKRDTF 1441
DFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRK+TKRDTF
Sbjct: 494 DFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKVTKRDTF 553
Query: 1442 IEKDVFMNILMWWEDFDGKVPAPTILKPRPLWTGKQVFNLIIPKQINLMRTSAWHSESET 1621
IEKDVFMNILMWWEDFDGKVPAP ILKPRPLWTGKQVFNLIIPKQINL+R SAWH++SE
Sbjct: 554 IEKDVFMNILMWWEDFDGKVPAPVILKPRPLWTGKQVFNLIIPKQINLLRYSAWHNDSEK 613
Query: 1622 GFLTPGDTQVRIERGEVITGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNY 1801
G++TPGDTQVRIE+GE+++GTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNY
Sbjct: 614 GYITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNY 673
Query: 1802 WLLQQAFSIGIGDTIADASTMEKINETISKAKNEVKELIRAAQEKQLEAEPGRTMMDSFE 1981
WLLQQAFSIGIGDTIADASTMEKINETIS AK +VKELI+AAQEK LEAEPGRTMM+SFE
Sbjct: 674 WLLQQAFSIGIGDTIADASTMEKINETISNAKAKVKELIKAAQEKLLEAEPGRTMMESFE 733
Query: 1982 NRVNQVLNKARDDAGSSAQKSLAESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRI 2161
NRVNQVLNKARDDAGSSA+KSL+ESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRI
Sbjct: 734 NRVNQVLNKARDDAGSSAEKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRI 793
Query: 2162 PYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETG 2341
P+GFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETG
Sbjct: 794 PFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETG 853
Query: 2342 YIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQRLDSLKMKKGEFNK 2521
YIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIE+Q+LDSLK KKG F+
Sbjct: 854 YIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIETQKLDSLKAKKGTFDD 913
Query: 2522 VYGYEFDDENWNPSYLLPEHVDDLQNIREFRNVFDAELKKLEEDRLQLGKDIVTTGDDVW 2701
+Y YE DD NWNPSY+LPE V+DL+ IRE R+VFDAE++KLE DR QLG +I TGD+ W
Sbjct: 914 MYAYEIDDPNWNPSYMLPEAVEDLKGIREIRSVFDAEVQKLEADRHQLGTEIAVTGDNSW 973
Query: 2702 PMPVNLKRLIWNAQKTFKIDLRRPSGMHPMEIVEAVDKLQERLKVVHGDDPMSTEAQKNA 2881
P+PVN++RL+ NAQKTFKID RRPS MHPMEIVEAVDKLQERLKVV GDD +S EAQKNA
Sbjct: 974 PLPVNIQRLVLNAQKTFKIDFRRPSDMHPMEIVEAVDKLQERLKVVPGDDYLSMEAQKNA 1033
Query: 2882 TLFFNILLRSTLASKRVLKEYRLTKEAFEWVVGEIESRFLQSLVASGEMIGCVAAQSIGE 3061
TLFFNILLRS LASKRVLKEYRL++EAFEWVVGEIESRFLQSLVA GEMIGCVAAQSIGE
Sbjct: 1034 TLFFNILLRSALASKRVLKEYRLSREAFEWVVGEIESRFLQSLVAPGEMIGCVAAQSIGE 1093
Query: 3062 PATQMTLNTFHFAGVSAKNVTLGVPRLREIINIAKKIKTPSLSVYLKPEVNKTKERAKNV 3241
PATQMTLNTFH+AGVSAKNVTLGVPRLREIIN+AKKIKTPSLSVYLKPEV KTKERAK V
Sbjct: 1094 PATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLKPEVGKTKERAKTV 1153
Query: 3242 QCALEYTTLRSVTQATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEEISPDKISPWLLRVE 3421
QCALEYTTLRSVTQATEVWYDPDPMST+IEED++FVKSYYEMPDEEI PDKISPWLLR+E
Sbjct: 1154 QCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEIDPDKISPWLLRIE 1213
Query: 3422 LNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGELNDES 3601
LNREMMVDKKLSMADIAEKIN+EFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGEL DES
Sbjct: 1214 LNREMMVDKKLSMADIAEKINVEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGEL-DES 1272
Query: 3602 AEDDVFLKKIESNMLTEMALRGIPDINKVFIKNWKRVRFDDDEGFMPEVEWMLDTEGVNL 3781
AEDDVFLKKIESNMLTEMALRGIPDINKVFIKN K +FDD+EGF E EWMLDTEGVNL
Sbjct: 1273 AEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKVQKFDDNEGFKAENEWMLDTEGVNL 1332
Query: 3782 LAVICHEDVDATRTTSNHLIEVMEVLGIEAVRKSLLDELRVVISFDGSYVNYRHLAILCD 3961
LAV+ HEDVDA+RTTSNHLIEV+EVLGIEAVR+SLLDELRVVISFDGSYVNYRHLAILCD
Sbjct: 1333 LAVMTHEDVDASRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAILCD 1392
Query: 3962 TMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDHLRGVTENIMLGQL 4141
TMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAV+AE+DHLRGVTENIMLGQL
Sbjct: 1393 TMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAESDHLRGVTENIMLGQL 1452
Query: 4142 APIGTGDCALYLNDKMLEHAIDLQLPSYME-GLDFGMTPSRSPIMGTPYRDGMMSPNYML 4318
APIGTG C+LYLN++ML+ AI++ LPSYME GL+FGMTP RSPI GTPY DGMMSPNY+L
Sbjct: 1453 APIGTGSCSLYLNEEMLKQAIEIPLPSYMEGGLEFGMTPGRSPISGTPYHDGMMSPNYLL 1512
Query: 4319 SPNLRLSPTNDAQFSPYVGGMAF 4387
SPN+R+SP DAQFSPYVGGMAF
Sbjct: 1513 SPNMRMSPITDAQFSPYVGGMAF 1535