BLASTX nr result
ID: Paeonia25_contig00005512
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Paeonia25_contig00005512
(1430 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006428771.1| hypothetical protein CICLE_v10012331mg [Citr... 320 1e-84
ref|XP_002281642.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop... 317 6e-84
ref|XP_007205644.1| hypothetical protein PRUPE_ppa009295mg [Prun... 301 5e-79
ref|XP_002519525.1| ribonucleoprotein, chloroplast, putative [Ri... 301 6e-79
sp|Q08935.1|ROC1_NICSY RecName: Full=29 kDa ribonucleoprotein A,... 300 1e-78
ref|XP_002323470.1| 29 kDa ribonucleoprotein [Populus trichocarp... 300 1e-78
ref|XP_004304439.1| PREDICTED: 29 kDa ribonucleoprotein A, chlor... 298 4e-78
ref|XP_002881497.1| hypothetical protein ARALYDRAFT_482714 [Arab... 296 2e-77
gb|AAM66970.1| putative RNA-binding protein [Arabidopsis thaliana] 295 3e-77
ref|XP_006428768.1| hypothetical protein CICLE_v10012331mg [Citr... 294 6e-77
ref|NP_181259.1| chloroplast RNA binding protein [Arabidopsis th... 294 8e-77
gb|EXC16209.1| 29 kDa ribonucleoprotein B [Morus notabilis] 293 2e-76
ref|XP_006294745.1| hypothetical protein CARUB_v10023790mg [Caps... 293 2e-76
ref|XP_006428770.1| hypothetical protein CICLE_v10012331mg [Citr... 290 8e-76
ref|XP_006363666.1| PREDICTED: 29 kDa ribonucleoprotein B, chlor... 289 2e-75
ref|XP_006428767.1| hypothetical protein CICLE_v10012331mg [Citr... 289 2e-75
ref|XP_006410902.1| hypothetical protein EUTSA_v10017023mg [Eutr... 289 2e-75
ref|XP_006381446.1| 29 kDa ribonucleoprotein [Populus trichocarp... 288 3e-75
ref|XP_006428769.1| hypothetical protein CICLE_v10012331mg [Citr... 288 5e-75
sp|P49313.1|ROC1_NICPL RecName: Full=30 kDa ribonucleoprotein, c... 287 7e-75
>ref|XP_006428771.1| hypothetical protein CICLE_v10012331mg [Citrus clementina]
gi|568855826|ref|XP_006481497.1| PREDICTED:
ribonucleoprotein At2g37220, chloroplastic-like [Citrus
sinensis] gi|557530828|gb|ESR42011.1| hypothetical
protein CICLE_v10012331mg [Citrus clementina]
Length = 282
Score = 320 bits (820), Expect = 1e-84
Identities = 177/268 (66%), Positives = 197/268 (73%), Gaps = 9/268 (3%)
Frame = -2
Query: 1234 PKTLALSTSQTPSLSL-------KLHPNPISTSHPXXXXXXXXXXXXXXRFVRNVAVTSE 1076
PKTLA S+ S SL KL PIS S FVRNVAV+SE
Sbjct: 16 PKTLAFYNSKPTSFSLLSSSSSHKLLAKPISISSSFIHSFQPLPSSPSR-FVRNVAVSSE 74
Query: 1075 FEQDEEVSNDRRQQNFSPELKLFVGNLPFNVDSADLAGLFEQAGNVEMVEVIYDKITGRS 896
F+Q+E++ +D NFSP+LKLFVGNLPF+VDSA LAGLFE AGNVEMVEVIYDK+TGRS
Sbjct: 75 FDQEEDLLSDEDGSNFSPDLKLFVGNLPFSVDSAQLAGLFETAGNVEMVEVIYDKVTGRS 134
Query: 895 RGFGFVTMSTIEEVEAAAQQFNGYELDGRPLRVNXXXXXXXXXXXXXXXXXXSGSNFDSE 716
RGFGFVTMS++EEVEAAAQQFNGYEL+GRPLRVN G+ S
Sbjct: 135 RGFGFVTMSSVEEVEAAAQQFNGYELEGRPLRVNSGPPPPRREEFSPRGPRGGGAGAPSS 194
Query: 715 --NRVYVGNLSWGVDDLALETLFGEQGKVMDAKVVYDRESGRSRGFGFVTYGSAEEVNNA 542
NRVYVGNLSWGVDDLALETLF EQGKV++AKVVYDRESGRSRGFGFVTY SAEEV+NA
Sbjct: 195 GGNRVYVGNLSWGVDDLALETLFREQGKVLEAKVVYDRESGRSRGFGFVTYSSAEEVDNA 254
Query: 541 IESLNGVDLEGRSIRVSAAEAKPPRRQF 458
I+SLNGVDL GR+IRVS AEA+P RRQF
Sbjct: 255 IDSLNGVDLAGRAIRVSVAEARPQRRQF 282
>ref|XP_002281642.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic isoform 1 [Vitis
vinifera]
Length = 288
Score = 317 bits (813), Expect = 6e-84
Identities = 179/280 (63%), Positives = 201/280 (71%), Gaps = 21/280 (7%)
Frame = -2
Query: 1234 PKTLALSTSQTPSL--------SLKLHPNPISTSHPXXXXXXXXXXXXXXRFVRNVAVTS 1079
PKTLA+S + S SLKLH N IS S RFVRNVAV+S
Sbjct: 15 PKTLAISKPTSVSFFSLPFSCSSLKLHSNSISLS-----PSSRGFLTLSSRFVRNVAVSS 69
Query: 1078 EFEQDEEVSNDRRQQNFSPELKLFVGNLPFNVDSADLAGLFEQAGNVEMVEVIYDKITGR 899
++EQDE+V +D + +FSP+LKLFVGNLPFNVDSA LAGLFEQAGNVEMVEVIYDKITGR
Sbjct: 70 DYEQDEDVLSDEGEPSFSPDLKLFVGNLPFNVDSAGLAGLFEQAGNVEMVEVIYDKITGR 129
Query: 898 SRGFGFVTMSTIEEVEAAAQQFNGYELDGRPLRVN-------------XXXXXXXXXXXX 758
SRGFGFVTMST+EEVEAAAQQFNGYEL+GR LRVN
Sbjct: 130 SRGFGFVTMSTVEEVEAAAQQFNGYELEGRQLRVNSGPPPARRENSNFRGENSNFRGENT 189
Query: 757 XXXXXXSGSNFDSENRVYVGNLSWGVDDLALETLFGEQGKVMDAKVVYDRESGRSRGFGF 578
G+N +S NR+YVGNLSWGVDDLALETLF EQGKV +A+V+YDRE+GRSRGFGF
Sbjct: 190 NFRGPRGGANLNSTNRIYVGNLSWGVDDLALETLFSEQGKVTEARVIYDRETGRSRGFGF 249
Query: 577 VTYGSAEEVNNAIESLNGVDLEGRSIRVSAAEAKPPRRQF 458
VTY SAEEVN AIESL+GVDL GRSIRV+ AEA+ PRRQF
Sbjct: 250 VTYNSAEEVNRAIESLDGVDLNGRSIRVTMAEAR-PRRQF 288
>ref|XP_007205644.1| hypothetical protein PRUPE_ppa009295mg [Prunus persica]
gi|462401286|gb|EMJ06843.1| hypothetical protein
PRUPE_ppa009295mg [Prunus persica]
Length = 298
Score = 301 bits (771), Expect = 5e-79
Identities = 169/267 (63%), Positives = 196/267 (73%), Gaps = 8/267 (2%)
Frame = -2
Query: 1234 PKTLALSTSQTPSL--------SLKLHPNPISTSHPXXXXXXXXXXXXXXRFVRNVAVTS 1079
PKTLAL T + S+ SL L PIS S RFVRNVAV+S
Sbjct: 37 PKTLALYTPKPTSVPFYSVSSSSLTLGCKPISIS--ASFLNSGRFQSASSRFVRNVAVSS 94
Query: 1078 EFEQDEEVSNDRRQQNFSPELKLFVGNLPFNVDSADLAGLFEQAGNVEMVEVIYDKITGR 899
EFEQDEEV +D + +F+P+LKLFVGNLPF+VDSA LAGLFE AGNVEMVEVIYDK TGR
Sbjct: 95 EFEQDEEVLSDDGEASFAPDLKLFVGNLPFSVDSAQLAGLFESAGNVEMVEVIYDKTTGR 154
Query: 898 SRGFGFVTMSTIEEVEAAAQQFNGYELDGRPLRVNXXXXXXXXXXXXXXXXXXSGSNFDS 719
SRGFGFVTMS+++E E AA+Q NGYELDGR LRVN GS DS
Sbjct: 155 SRGFGFVTMSSVQEAEGAARQLNGYELDGRALRVNYGPPPPRSEDSFRGARGGGGS--DS 212
Query: 718 ENRVYVGNLSWGVDDLALETLFGEQGKVMDAKVVYDRESGRSRGFGFVTYGSAEEVNNAI 539
NR+YVGNL+WGVD+LALE LF EQGKV++AKVVYDR+SGRSRGFGFVTYG+A+E+N+A+
Sbjct: 213 SNRLYVGNLAWGVDNLALENLFSEQGKVLEAKVVYDRDSGRSRGFGFVTYGTADEMNSAM 272
Query: 538 ESLNGVDLEGRSIRVSAAEAKPPRRQF 458
ESL+GVDL GRSIRV+AAE + PRRQF
Sbjct: 273 ESLDGVDLNGRSIRVTAAEPR-PRRQF 298
>ref|XP_002519525.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
gi|223541388|gb|EEF42939.1| ribonucleoprotein,
chloroplast, putative [Ricinus communis]
Length = 280
Score = 301 bits (770), Expect = 6e-79
Identities = 168/266 (63%), Positives = 192/266 (72%), Gaps = 7/266 (2%)
Frame = -2
Query: 1234 PKTLALSTSQTP-SLSLKLHPNPIS---TSHPXXXXXXXXXXXXXXRFVRNVAVTSEFEQ 1067
PKTL+L P SLS KLH PIS + RFV +VA++SEF Q
Sbjct: 16 PKTLSLCNPNKPISLSFKLHAKPISIPSSLFSSFVPLQQQPYSSSSRFVPSVAISSEFGQ 75
Query: 1066 DEEVSNDRRQQNFSPELKLFVGNLPFNVDSADLAGLFEQAGNVEMVEVIYDKITGRSRGF 887
+E+VS+D + +FS +LKLFVGNLPFNVDSA LAGLFE AGNVEMVEVIYDK+TGRSRGF
Sbjct: 76 EEDVSSDGDESSFSQDLKLFVGNLPFNVDSAQLAGLFESAGNVEMVEVIYDKVTGRSRGF 135
Query: 886 GFVTMSTIEEVEAAAQQFNGYELDGRPLRVNXXXXXXXXXXXXXXXXXXSGSNFDSE--- 716
GFVTMS+I+EVEAAAQQFNGYEL+GR LRVN G
Sbjct: 136 GFVTMSSIDEVEAAAQQFNGYELEGRALRVNSGPPPQRESSFSRSPRFGGGGGGGESLEG 195
Query: 715 NRVYVGNLSWGVDDLALETLFGEQGKVMDAKVVYDRESGRSRGFGFVTYGSAEEVNNAIE 536
NR+YVGNLSW VD+LALE+ F EQGKV+DAKVVYDRESGRSRGFGFVTY SAEEV NAI+
Sbjct: 196 NRLYVGNLSWSVDNLALESFFSEQGKVVDAKVVYDRESGRSRGFGFVTYSSAEEVENAID 255
Query: 535 SLNGVDLEGRSIRVSAAEAKPPRRQF 458
SLNG +L+GR+IRVS AEA+ PRRQF
Sbjct: 256 SLNGAELDGRAIRVSVAEAR-PRRQF 280
>sp|Q08935.1|ROC1_NICSY RecName: Full=29 kDa ribonucleoprotein A, chloroplastic; AltName:
Full=CP29A; Flags: Precursor gi|19754|emb|CAA43427.1|
29kD A ribonucleoprotein [Nicotiana sylvestris]
Length = 273
Score = 300 bits (767), Expect = 1e-78
Identities = 170/266 (63%), Positives = 194/266 (72%), Gaps = 7/266 (2%)
Frame = -2
Query: 1234 PKTLALS--TSQTPSLSL-KLHPNPISTSHPXXXXXXXXXXXXXXRFVRNVAVTSEFEQD 1064
P+TL L TSQT SLS L P+ ++ S RFVR V + S+F+Q
Sbjct: 15 PQTLPLPKPTSQTTSLSFFSLPPSSLNLS------LSSSSSCFSSRFVRKVTL-SDFDQI 67
Query: 1063 EEVSND----RRQQNFSPELKLFVGNLPFNVDSADLAGLFEQAGNVEMVEVIYDKITGRS 896
E+V + ++NFSP+LK+FVGNLPF+ DSA LA LFE+AGNVEMVEVIYDK+TGRS
Sbjct: 68 EDVEDGDDGVEEERNFSPDLKIFVGNLPFSADSAALAELFERAGNVEMVEVIYDKLTGRS 127
Query: 895 RGFGFVTMSTIEEVEAAAQQFNGYELDGRPLRVNXXXXXXXXXXXXXXXXXXSGSNFDSE 716
RGFGFVTMS+ EEVEAA QQFNGYELDGR LRVN G +FDS
Sbjct: 128 RGFGFVTMSSKEEVEAACQQFNGYELDGRALRVNSGPPPEKRENSSFRGGSRGGGSFDSS 187
Query: 715 NRVYVGNLSWGVDDLALETLFGEQGKVMDAKVVYDRESGRSRGFGFVTYGSAEEVNNAIE 536
NRVYVGNL+WGVD ALETLF EQGKV+DAKVVYDR+SGRSRGFGFVTY SAEEVNNAIE
Sbjct: 188 NRVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVNNAIE 247
Query: 535 SLNGVDLEGRSIRVSAAEAKPPRRQF 458
SL+GVDL GR+IRVS AEA+PPRRQF
Sbjct: 248 SLDGVDLNGRAIRVSPAEARPPRRQF 273
>ref|XP_002323470.1| 29 kDa ribonucleoprotein [Populus trichocarpa]
gi|222868100|gb|EEF05231.1| 29 kDa ribonucleoprotein
[Populus trichocarpa]
Length = 273
Score = 300 bits (767), Expect = 1e-78
Identities = 156/216 (72%), Positives = 179/216 (82%)
Frame = -2
Query: 1105 FVRNVAVTSEFEQDEEVSNDRRQQNFSPELKLFVGNLPFNVDSADLAGLFEQAGNVEMVE 926
F++NVA++SEF Q+E+ +D +Q+FS +LKLFVGNLPFNVDSA LAGLFE AGNVEMVE
Sbjct: 61 FLKNVAISSEFGQEEDFLSDGDEQSFSQDLKLFVGNLPFNVDSARLAGLFETAGNVEMVE 120
Query: 925 VIYDKITGRSRGFGFVTMSTIEEVEAAAQQFNGYELDGRPLRVNXXXXXXXXXXXXXXXX 746
VIYDK+TGRSRGFGFVTM+TIEEVEAA++QFNGYELDGR LRVN
Sbjct: 121 VIYDKVTGRSRGFGFVTMTTIEEVEAASKQFNGYELDGRTLRVN--FGPPPQKESSFSRG 178
Query: 745 XXSGSNFDSENRVYVGNLSWGVDDLALETLFGEQGKVMDAKVVYDRESGRSRGFGFVTYG 566
G FDS NRVYVGNLSW VD+LALETLF E+G+VMDAKVVYDR+SGRSRGFGFVTY
Sbjct: 179 PRGGETFDSGNRVYVGNLSWNVDNLALETLFREKGRVMDAKVVYDRDSGRSRGFGFVTYS 238
Query: 565 SAEEVNNAIESLNGVDLEGRSIRVSAAEAKPPRRQF 458
SAEEV+NAI+SLNG +L+GR+IRVS AEAK PRRQF
Sbjct: 239 SAEEVDNAIDSLNGAELDGRAIRVSVAEAK-PRRQF 273
>ref|XP_004304439.1| PREDICTED: 29 kDa ribonucleoprotein A, chloroplastic-like [Fragaria
vesca subsp. vesca]
Length = 277
Score = 298 bits (763), Expect = 4e-78
Identities = 172/271 (63%), Positives = 194/271 (71%), Gaps = 12/271 (4%)
Frame = -2
Query: 1234 PKTLALSTSQTPSLSL-------KLHPNPISTSHPXXXXXXXXXXXXXXRFVRNVAVTSE 1076
PKTLAL + + S+SL L P IS S FVR+VAV S+
Sbjct: 15 PKTLALYSPKPTSVSLFSLSSFSSLKPISISASF-------LSSGKASRSFVRHVAV-SD 66
Query: 1075 FEQDEEV-SNDRRQQNFSPELKLFVGNLPFNVDSADLAGLFEQAGNVEMVEVIYDKITGR 899
FEQDEEV S D + NFSP+LKLFVGNLPF VDSA LA LFE AGNVEMVEVIYDK TGR
Sbjct: 67 FEQDEEVLSGDEAEPNFSPDLKLFVGNLPFTVDSAQLAELFEGAGNVEMVEVIYDKTTGR 126
Query: 898 SRGFGFVTMSTIEEVEAAAQQFNGYELDGRPLRVN----XXXXXXXXXXXXXXXXXXSGS 731
SRGFGFVTMS+ +EVEAAA+QFNGYELDGR LRVN G
Sbjct: 127 SRGFGFVTMSSAQEVEAAARQFNGYELDGRALRVNYGPPPPRTEDSFRGARGGSPRGGGG 186
Query: 730 NFDSENRVYVGNLSWGVDDLALETLFGEQGKVMDAKVVYDRESGRSRGFGFVTYGSAEEV 551
DS NR+YVGNL+WGVD+LALE LF EQGKV++AKVV+DR+SGRSRGFGFVTYGSAEE+
Sbjct: 187 YGDSSNRLYVGNLAWGVDNLALENLFNEQGKVLEAKVVFDRDSGRSRGFGFVTYGSAEEM 246
Query: 550 NNAIESLNGVDLEGRSIRVSAAEAKPPRRQF 458
N+AIESL+GVDL GRSIRV+AAE +PPRRQF
Sbjct: 247 NSAIESLDGVDLGGRSIRVTAAEPRPPRRQF 277
>ref|XP_002881497.1| hypothetical protein ARALYDRAFT_482714 [Arabidopsis lyrata subsp.
lyrata] gi|297327336|gb|EFH57756.1| hypothetical protein
ARALYDRAFT_482714 [Arabidopsis lyrata subsp. lyrata]
Length = 289
Score = 296 bits (757), Expect = 2e-77
Identities = 167/281 (59%), Positives = 193/281 (68%), Gaps = 22/281 (7%)
Frame = -2
Query: 1234 PKTLALSTSQT-------PSLSLKLHPNPISTSHPXXXXXXXXXXXXXXRFVRNVAVTSE 1076
PK+L S+ PSLS KL+ + +S S RFVRNVA+TSE
Sbjct: 15 PKSLPFCVSRPASVSLLPPSLSFKLNSDSVSFS------IAAKWNSPASRFVRNVAITSE 68
Query: 1075 FEQDEEVSNDR---RQQNFSPELKLFVGNLPFNVDSADLAGLFEQAGNVEMVEVIYDKIT 905
FE +E+ D +QQ+FS +LKLFVGNLPFNVDSA LA LFE AGNVEMVEVIYDK+T
Sbjct: 69 FEVEEDGFADDAAPQQQSFSADLKLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKVT 128
Query: 904 GRSRGFGFVTMSTIEEVEAAAQQFNGYELDGRPLRVN------------XXXXXXXXXXX 761
GRSRGFGFVTMS++ EVEAAA QFNGYELDGRPLRVN
Sbjct: 129 GRSRGFGFVTMSSVSEVEAAANQFNGYELDGRPLRVNAGPPPPKREDGFSRGPRSSFGSS 188
Query: 760 XXXXXXXSGSNFDSENRVYVGNLSWGVDDLALETLFGEQGKVMDAKVVYDRESGRSRGFG 581
GS S NRVYVGNLSWGVDD+ALE+LF EQGKV++A+V+YDR+SGRS+GFG
Sbjct: 189 GSGYGGGGGSGAGSGNRVYVGNLSWGVDDMALESLFAEQGKVVEARVIYDRDSGRSKGFG 248
Query: 580 FVTYGSAEEVNNAIESLNGVDLEGRSIRVSAAEAKPPRRQF 458
FVTY S++EV NAI SLNG DL+GR IRVS AEA+PPRRQF
Sbjct: 249 FVTYNSSQEVQNAINSLNGADLDGRQIRVSEAEARPPRRQF 289
>gb|AAM66970.1| putative RNA-binding protein [Arabidopsis thaliana]
Length = 289
Score = 295 bits (756), Expect = 3e-77
Identities = 166/281 (59%), Positives = 196/281 (69%), Gaps = 22/281 (7%)
Frame = -2
Query: 1234 PKTLALSTSQ-------TPSLSLKLHPNPISTSHPXXXXXXXXXXXXXXRFVRNVAVTSE 1076
PK+L S+ +PSLS KL+ + +S S RFVRNVA+TSE
Sbjct: 15 PKSLPFGVSRPASVSLLSPSLSFKLNSDSVSFS------IAAKWNSPASRFVRNVAITSE 68
Query: 1075 FEQDEEVSND---RRQQNFSPELKLFVGNLPFNVDSADLAGLFEQAGNVEMVEVIYDKIT 905
FE +E+ D ++Q+FS +LKLFVGNLPFNVDSA LA LFE AGNVEMVEVIYDKIT
Sbjct: 69 FEVEEDGFADVAPPKEQSFSADLKLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKIT 128
Query: 904 GRSRGFGFVTMSTIEEVEAAAQQFNGYELDGRPLRVN------------XXXXXXXXXXX 761
GRSRGFGFVTMS++ EVEAAAQQFNGYELDGRPLRVN
Sbjct: 129 GRSRGFGFVTMSSVSEVEAAAQQFNGYELDGRPLRVNAGPPPPKREDGFSRGPRSSFGSS 188
Query: 760 XXXXXXXSGSNFDSENRVYVGNLSWGVDDLALETLFGEQGKVMDAKVVYDRESGRSRGFG 581
GS S NRVYVGNLSWGVDD+ALE+LF EQGKV++A+V+YDR+SGRS+GFG
Sbjct: 189 GSGYGGGGGSGAGSGNRVYVGNLSWGVDDMALESLFSEQGKVVEARVIYDRDSGRSKGFG 248
Query: 580 FVTYGSAEEVNNAIESLNGVDLEGRSIRVSAAEAKPPRRQF 458
FVTY S++EV NAI+SL+G DL+GR IRVS AEA+PPRRQ+
Sbjct: 249 FVTYDSSQEVQNAIKSLDGADLDGRQIRVSEAEARPPRRQY 289
>ref|XP_006428768.1| hypothetical protein CICLE_v10012331mg [Citrus clementina]
gi|557530825|gb|ESR42008.1| hypothetical protein
CICLE_v10012331mg [Citrus clementina]
Length = 271
Score = 294 bits (753), Expect = 6e-77
Identities = 168/268 (62%), Positives = 186/268 (69%), Gaps = 9/268 (3%)
Frame = -2
Query: 1234 PKTLALSTSQTPSLSL-------KLHPNPISTSHPXXXXXXXXXXXXXXRFVRNVAVTSE 1076
PKTLA S+ S SL KL PIS S FVRNVAV+SE
Sbjct: 16 PKTLAFYNSKPTSFSLLSSSSSHKLLAKPISISSSFIHSFQPLPSSPSR-FVRNVAVSSE 74
Query: 1075 FEQDEEVSNDRRQQNFSPELKLFVGNLPFNVDSADLAGLFEQAGNVEMVEVIYDKITGRS 896
F+Q+E++ +D NFSP+LKLFVGNLPF+VDSA LAGLFE AGNVEMVEVIYDK+TGRS
Sbjct: 75 FDQEEDLLSDEDGSNFSPDLKLFVGNLPFSVDSAQLAGLFETAGNVEMVEVIYDKVTGRS 134
Query: 895 RGFGFVTMSTIEEVEAAAQQFNGYELDGRPLRVNXXXXXXXXXXXXXXXXXXSGSNFDSE 716
RGFGFVTMS++EEVEAAAQQFNGYEL+GRPLRVN G+ S
Sbjct: 135 RGFGFVTMSSVEEVEAAAQQFNGYELEGRPLRVNSGPPPPRREEFSPRGPRGGGAGAPSS 194
Query: 715 --NRVYVGNLSWGVDDLALETLFGEQGKVMDAKVVYDRESGRSRGFGFVTYGSAEEVNNA 542
NRVYVGNLSWGVDDLALETLF EQGKV++AKVVYDRESGRSRGFGFVTY SAEE
Sbjct: 195 GGNRVYVGNLSWGVDDLALETLFREQGKVLEAKVVYDRESGRSRGFGFVTYSSAEE---- 250
Query: 541 IESLNGVDLEGRSIRVSAAEAKPPRRQF 458
DL GR+IRVS AEA+P RRQF
Sbjct: 251 -------DLAGRAIRVSVAEARPQRRQF 271
>ref|NP_181259.1| chloroplast RNA binding protein [Arabidopsis thaliana]
gi|12230623|sp|Q9ZUU4.1|ROC1_ARATH RecName:
Full=Ribonucleoprotein At2g37220, chloroplastic; Flags:
Precursor gi|13877809|gb|AAK43982.1|AF370167_1 putative
RNA-binding protein [Arabidopsis thaliana]
gi|4056477|gb|AAC98043.1| putative RNA-binding protein
[Arabidopsis thaliana] gi|15081717|gb|AAK82513.1|
At2g37220/F3G5.1 [Arabidopsis thaliana]
gi|16323482|gb|AAL15235.1| putative RNA-binding protein
[Arabidopsis thaliana] gi|20197716|gb|AAM15222.1|
putative RNA-binding protein [Arabidopsis thaliana]
gi|330254275|gb|AEC09369.1| chloroplast RNA binding
protein [Arabidopsis thaliana]
Length = 289
Score = 294 bits (752), Expect = 8e-77
Identities = 165/281 (58%), Positives = 195/281 (69%), Gaps = 22/281 (7%)
Frame = -2
Query: 1234 PKTLALSTSQ-------TPSLSLKLHPNPISTSHPXXXXXXXXXXXXXXRFVRNVAVTSE 1076
PK+L S+ +PSLS KL+ + +S S RF RNVA+TSE
Sbjct: 15 PKSLPFGVSRPASVSLLSPSLSFKLNSDSVSFS------IAAKWNSPASRFARNVAITSE 68
Query: 1075 FEQDEEVSND---RRQQNFSPELKLFVGNLPFNVDSADLAGLFEQAGNVEMVEVIYDKIT 905
FE +E+ D ++Q+FS +LKLFVGNLPFNVDSA LA LFE AGNVEMVEVIYDKIT
Sbjct: 69 FEVEEDGFADVAPPKEQSFSADLKLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKIT 128
Query: 904 GRSRGFGFVTMSTIEEVEAAAQQFNGYELDGRPLRVN------------XXXXXXXXXXX 761
GRSRGFGFVTMS++ EVEAAAQQFNGYELDGRPLRVN
Sbjct: 129 GRSRGFGFVTMSSVSEVEAAAQQFNGYELDGRPLRVNAGPPPPKREDGFSRGPRSSFGSS 188
Query: 760 XXXXXXXSGSNFDSENRVYVGNLSWGVDDLALETLFGEQGKVMDAKVVYDRESGRSRGFG 581
GS S NRVYVGNLSWGVDD+ALE+LF EQGKV++A+V+YDR+SGRS+GFG
Sbjct: 189 GSGYGGGGGSGAGSGNRVYVGNLSWGVDDMALESLFSEQGKVVEARVIYDRDSGRSKGFG 248
Query: 580 FVTYGSAEEVNNAIESLNGVDLEGRSIRVSAAEAKPPRRQF 458
FVTY S++EV NAI+SL+G DL+GR IRVS AEA+PPRRQ+
Sbjct: 249 FVTYDSSQEVQNAIKSLDGADLDGRQIRVSEAEARPPRRQY 289
>gb|EXC16209.1| 29 kDa ribonucleoprotein B [Morus notabilis]
Length = 296
Score = 293 bits (749), Expect = 2e-76
Identities = 164/272 (60%), Positives = 196/272 (72%), Gaps = 13/272 (4%)
Frame = -2
Query: 1234 PKTLALSTSQTPS---LSLKLHPNPISTSHPXXXXXXXXXXXXXXRFVRNVAVTSEFEQD 1064
P +L+LS+ +PS SLKL+ ++ RFV VAV+SEF+QD
Sbjct: 26 PTSLSLSSLYSPSSSFASLKLYAGNVNVVCVSARGFRGLSSSSPCRFVPKVAVSSEFDQD 85
Query: 1063 EEVSNDRRQQ-NFSPELKLFVGNLPFNVDSADLAGLFEQAGNVEMVEVIYDKITGRSRGF 887
E+V +D ++ FSP+LKLFVGNLPF+VDSA LAGLFE+ GNVEMVEVIYDK TGRSRGF
Sbjct: 86 EDVLSDGGEEPGFSPDLKLFVGNLPFSVDSAQLAGLFERTGNVEMVEVIYDKTTGRSRGF 145
Query: 886 GFVTMSTIEEVEAAAQQFNGYELDGRPLRVN---------XXXXXXXXXXXXXXXXXXSG 734
GFVTMS+I+EVEAAAQQFNGYEL+GRPLRVN G
Sbjct: 146 GFVTMSSIDEVEAAAQQFNGYELEGRPLRVNYGPPPSREDDSFPRGRRGGGGGGGGGGGG 205
Query: 733 SNFDSENRVYVGNLSWGVDDLALETLFGEQGKVMDAKVVYDRESGRSRGFGFVTYGSAEE 554
+ +++ NRVYVGNLSWGVD+ ALE+LF EQGKV++AKVVYDR+SGRSRGFGFVTY +A+E
Sbjct: 206 AGYETGNRVYVGNLSWGVDNAALESLFSEQGKVLEAKVVYDRDSGRSRGFGFVTYNTADE 265
Query: 553 VNNAIESLNGVDLEGRSIRVSAAEAKPPRRQF 458
VN+AI SLNGVDL GRSIRV+ AEAK PRR F
Sbjct: 266 VNSAINSLNGVDLNGRSIRVTHAEAK-PRRSF 296
>ref|XP_006294745.1| hypothetical protein CARUB_v10023790mg [Capsella rubella]
gi|482563453|gb|EOA27643.1| hypothetical protein
CARUB_v10023790mg [Capsella rubella]
Length = 284
Score = 293 bits (749), Expect = 2e-76
Identities = 168/277 (60%), Positives = 194/277 (70%), Gaps = 18/277 (6%)
Frame = -2
Query: 1234 PKTLALSTSQT-------PSLSLKLHPNPISTSHPXXXXXXXXXXXXXXRFVRNVAVTSE 1076
PK+L S+ PSLS KL+ + +S S RFVRNVA TSE
Sbjct: 15 PKSLPFCVSRPASVSLLPPSLSFKLNSDSVSVS------IAAKWSSPASRFVRNVA-TSE 67
Query: 1075 FEQDEEVSNDR---RQQNFSPELKLFVGNLPFNVDSADLAGLFEQAGNVEMVEVIYDKIT 905
FE +E+ +D ++Q+FS +LKLFVGNLPFNVDSA LA LFE AGNVEMVEVIYDK+T
Sbjct: 68 FEVEEDGFSDDAAPQEQSFSADLKLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKVT 127
Query: 904 GRSRGFGFVTMSTIEEVEAAAQQFNGYELDGRPLRVNXXXXXXXXXXXXXXXXXXS---- 737
GRSRGFGFVTMS+ EVEAAAQQFNGYELDGRPLRVN S
Sbjct: 128 GRSRGFGFVTMSSASEVEAAAQQFNGYELDGRPLRVNAGPPPPKREDGFSRGPRSSFGGS 187
Query: 736 ----GSNFDSENRVYVGNLSWGVDDLALETLFGEQGKVMDAKVVYDRESGRSRGFGFVTY 569
GS S NRVYVGNLSWGVDD+ALE+LF EQGKV++A+V+YDR+SGRS+GFGFVTY
Sbjct: 188 GYGGGSGAGSGNRVYVGNLSWGVDDMALESLFAEQGKVVEARVIYDRDSGRSKGFGFVTY 247
Query: 568 GSAEEVNNAIESLNGVDLEGRSIRVSAAEAKPPRRQF 458
S++EV NAI SLNG DL+GR IRVS AEA+PPRRQF
Sbjct: 248 NSSQEVQNAINSLNGADLDGRQIRVSEAEARPPRRQF 284
>ref|XP_006428770.1| hypothetical protein CICLE_v10012331mg [Citrus clementina]
gi|557530827|gb|ESR42010.1| hypothetical protein
CICLE_v10012331mg [Citrus clementina]
Length = 266
Score = 290 bits (743), Expect = 8e-76
Identities = 163/252 (64%), Positives = 181/252 (71%), Gaps = 9/252 (3%)
Frame = -2
Query: 1234 PKTLALSTSQTPSLSL-------KLHPNPISTSHPXXXXXXXXXXXXXXRFVRNVAVTSE 1076
PKTLA S+ S SL KL PIS S FVRNVAV+SE
Sbjct: 16 PKTLAFYNSKPTSFSLLSSSSSHKLLAKPISISSSFIHSFQPLPSSPSR-FVRNVAVSSE 74
Query: 1075 FEQDEEVSNDRRQQNFSPELKLFVGNLPFNVDSADLAGLFEQAGNVEMVEVIYDKITGRS 896
F+Q+E++ +D NFSP+LKLFVGNLPF+VDSA LAGLFE AGNVEMVEVIYDK+TGRS
Sbjct: 75 FDQEEDLLSDEDGSNFSPDLKLFVGNLPFSVDSAQLAGLFETAGNVEMVEVIYDKVTGRS 134
Query: 895 RGFGFVTMSTIEEVEAAAQQFNGYELDGRPLRVNXXXXXXXXXXXXXXXXXXSGSNFDSE 716
RGFGFVTMS++EEVEAAAQQFNGYEL+GRPLRVN G+ S
Sbjct: 135 RGFGFVTMSSVEEVEAAAQQFNGYELEGRPLRVNSGPPPPRREEFSPRGPRGGGAGAPSS 194
Query: 715 --NRVYVGNLSWGVDDLALETLFGEQGKVMDAKVVYDRESGRSRGFGFVTYGSAEEVNNA 542
NRVYVGNLSWGVDDLALETLF EQGKV++AKVVYDRESGRSRGFGFVTY SAEEV+NA
Sbjct: 195 GGNRVYVGNLSWGVDDLALETLFREQGKVLEAKVVYDRESGRSRGFGFVTYSSAEEVDNA 254
Query: 541 IESLNGVDLEGR 506
I+SLNGV GR
Sbjct: 255 IDSLNGVVRFGR 266
Score = 90.5 bits (223), Expect = 2e-15
Identities = 53/126 (42%), Positives = 73/126 (57%)
Frame = -2
Query: 736 GSNFDSENRVYVGNLSWGVDDLALETLFGEQGKVMDAKVVYDRESGRSRGFGFVTYGSAE 557
GSNF + +++VGNL + VD L LF G V +V+YD+ +GRSRGFGFVT S E
Sbjct: 87 GSNFSPDLKLFVGNLPFSVDSAQLAGLFETAGNVEMVEVIYDKVTGRSRGFGFVTMSSVE 146
Query: 556 EVNNAIESLNGVDLEGRSIRVSAAEAKPPRRQF*LLNQQQKENMGTCSSLHDCIWMCCLS 377
EV A + NG +LEGR +RV++ PPRR+ + G SS + +++ LS
Sbjct: 147 EVEAAAQQFNGYELEGRPLRVNSG-PPPPRREEFSPRGPRGGGAGAPSSGGNRVYVGNLS 205
Query: 376 SSTDDL 359
DDL
Sbjct: 206 WGVDDL 211
>ref|XP_006363666.1| PREDICTED: 29 kDa ribonucleoprotein B, chloroplastic-like isoform X2
[Solanum tuberosum]
Length = 291
Score = 289 bits (740), Expect = 2e-75
Identities = 162/260 (62%), Positives = 185/260 (71%), Gaps = 12/260 (4%)
Frame = -2
Query: 1201 PSLSLKLHPNPISTSHPXXXXXXXXXXXXXXRFVRNVAVTSEFEQ-DEEVSNDRRQQNFS 1025
PS SL L +S+S P RFVRNVA+ SEF+Q +++V + NFS
Sbjct: 36 PSSSLNLS---LSSSTPSSSIKPFESSSFGSRFVRNVAL-SEFDQLEDDVGEVEEEPNFS 91
Query: 1024 PELKLFVGNLPFNVDSADLAGLFEQAGNVEMVEVIYDKITGRSRGFGFVTMSTIEEVEAA 845
P+LKLFVGNLPF+VDSA LA LFE+AGNVEMVEVIYDK+TGRSRGFGFVTMS+ EVEAA
Sbjct: 92 PDLKLFVGNLPFSVDSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKAEVEAA 151
Query: 844 AQQFNGYELDGRPLRVN-----------XXXXXXXXXXXXXXXXXXSGSNFDSENRVYVG 698
QQFNGYE+DGR LRVN G NFDS NRVYVG
Sbjct: 152 EQQFNGYEIDGRALRVNSGPAPEKRENSFGGGRGGRSENSSYGGARGGRNFDSSNRVYVG 211
Query: 697 NLSWGVDDLALETLFGEQGKVMDAKVVYDRESGRSRGFGFVTYGSAEEVNNAIESLNGVD 518
NLSWGVDDL+L LF +QGKV+D KVVYDR+SGRSRGFGFVT+ SA+EVN AI+SLNG D
Sbjct: 212 NLSWGVDDLSLRELFSDQGKVVDCKVVYDRDSGRSRGFGFVTFSSAQEVNKAIDSLNGFD 271
Query: 517 LEGRSIRVSAAEAKPPRRQF 458
L+GRSIRVSAAE +PPRRQF
Sbjct: 272 LDGRSIRVSAAEERPPRRQF 291
>ref|XP_006428767.1| hypothetical protein CICLE_v10012331mg [Citrus clementina]
gi|557530824|gb|ESR42007.1| hypothetical protein
CICLE_v10012331mg [Citrus clementina]
Length = 297
Score = 289 bits (740), Expect = 2e-75
Identities = 161/247 (65%), Positives = 179/247 (72%), Gaps = 9/247 (3%)
Frame = -2
Query: 1234 PKTLALSTSQTPSLSL-------KLHPNPISTSHPXXXXXXXXXXXXXXRFVRNVAVTSE 1076
PKTLA S+ S SL KL PIS S FVRNVAV+SE
Sbjct: 16 PKTLAFYNSKPTSFSLLSSSSSHKLLAKPISISSSFIHSFQPLPSSPSR-FVRNVAVSSE 74
Query: 1075 FEQDEEVSNDRRQQNFSPELKLFVGNLPFNVDSADLAGLFEQAGNVEMVEVIYDKITGRS 896
F+Q+E++ +D NFSP+LKLFVGNLPF+VDSA LAGLFE AGNVEMVEVIYDK+TGRS
Sbjct: 75 FDQEEDLLSDEDGSNFSPDLKLFVGNLPFSVDSAQLAGLFETAGNVEMVEVIYDKVTGRS 134
Query: 895 RGFGFVTMSTIEEVEAAAQQFNGYELDGRPLRVNXXXXXXXXXXXXXXXXXXSGSNFDSE 716
RGFGFVTMS++EEVEAAAQQFNGYEL+GRPLRVN G+ S
Sbjct: 135 RGFGFVTMSSVEEVEAAAQQFNGYELEGRPLRVNSGPPPPRREEFSPRGPRGGGAGAPSS 194
Query: 715 --NRVYVGNLSWGVDDLALETLFGEQGKVMDAKVVYDRESGRSRGFGFVTYGSAEEVNNA 542
NRVYVGNLSWGVDDLALETLF EQGKV++AKVVYDRESGRSRGFGFVTY SAEEV+NA
Sbjct: 195 GGNRVYVGNLSWGVDDLALETLFREQGKVLEAKVVYDRESGRSRGFGFVTYSSAEEVDNA 254
Query: 541 IESLNGV 521
I+SLNGV
Sbjct: 255 IDSLNGV 261
Score = 90.5 bits (223), Expect = 2e-15
Identities = 53/126 (42%), Positives = 73/126 (57%)
Frame = -2
Query: 736 GSNFDSENRVYVGNLSWGVDDLALETLFGEQGKVMDAKVVYDRESGRSRGFGFVTYGSAE 557
GSNF + +++VGNL + VD L LF G V +V+YD+ +GRSRGFGFVT S E
Sbjct: 87 GSNFSPDLKLFVGNLPFSVDSAQLAGLFETAGNVEMVEVIYDKVTGRSRGFGFVTMSSVE 146
Query: 556 EVNNAIESLNGVDLEGRSIRVSAAEAKPPRRQF*LLNQQQKENMGTCSSLHDCIWMCCLS 377
EV A + NG +LEGR +RV++ PPRR+ + G SS + +++ LS
Sbjct: 147 EVEAAAQQFNGYELEGRPLRVNSG-PPPPRREEFSPRGPRGGGAGAPSSGGNRVYVGNLS 205
Query: 376 SSTDDL 359
DDL
Sbjct: 206 WGVDDL 211
>ref|XP_006410902.1| hypothetical protein EUTSA_v10017023mg [Eutrema salsugineum]
gi|557112071|gb|ESQ52355.1| hypothetical protein
EUTSA_v10017023mg [Eutrema salsugineum]
Length = 292
Score = 289 bits (739), Expect = 2e-75
Identities = 166/280 (59%), Positives = 193/280 (68%), Gaps = 21/280 (7%)
Frame = -2
Query: 1234 PKTLALSTSQT-------PSLSLKLHPNPISTSHPXXXXXXXXXXXXXXRFVRNVAVTSE 1076
PK+L S+ PS+S KL+ +S S RFVRNVAVT +
Sbjct: 15 PKSLPFCVSRPASASLLPPSVSFKLNSESVSVS--IFASSAAKWSSAASRFVRNVAVTED 72
Query: 1075 FEQDEE--VSNDR--RQQNFSPELKLFVGNLPFNVDSADLAGLFEQAGNVEMVEVIYDKI 908
FE +E+ ++D R+Q+FS +LKLFVGNLPF+VDSA LA LFE AG VE+VEVIYDKI
Sbjct: 73 FEVEEDGIFADDAAPREQSFSADLKLFVGNLPFDVDSARLAQLFESAGTVEIVEVIYDKI 132
Query: 907 TGRSRGFGFVTMSTIEEVEAAAQQFNGYELDGRPLRVNXXXXXXXXXXXXXXXXXXS--- 737
TGRSRGFGFVTMS+ EVEAAAQQFNGYELDGRPLRVN S
Sbjct: 133 TGRSRGFGFVTMSSASEVEAAAQQFNGYELDGRPLRVNAGPPPPKREDGFSRGPRSSFGS 192
Query: 736 -------GSNFDSENRVYVGNLSWGVDDLALETLFGEQGKVMDAKVVYDRESGRSRGFGF 578
GS S NRVYVGNLSWGVDD+ALE LFGEQGKV++A+V+YDR+SGRS+GFGF
Sbjct: 193 SGSGYGGGSGAGSGNRVYVGNLSWGVDDMALENLFGEQGKVVEARVIYDRDSGRSKGFGF 252
Query: 577 VTYGSAEEVNNAIESLNGVDLEGRSIRVSAAEAKPPRRQF 458
VTY SA+EV NAI +LNG DL+GR IRVS AEA+PPRRQF
Sbjct: 253 VTYNSAQEVQNAIRTLNGADLDGRQIRVSEAEARPPRRQF 292
>ref|XP_006381446.1| 29 kDa ribonucleoprotein [Populus trichocarpa]
gi|550336149|gb|ERP59243.1| 29 kDa ribonucleoprotein
[Populus trichocarpa]
Length = 286
Score = 288 bits (738), Expect = 3e-75
Identities = 149/224 (66%), Positives = 174/224 (77%), Gaps = 10/224 (4%)
Frame = -2
Query: 1105 FVRNVAVTSEFEQDEEVSNDRRQQNFSPELKLFVGNLPFNVDSADLAGLFEQAGNVEMVE 926
F+++VA++SEF Q+E+V D + +FSP+L+LFVGNLPFNV+SA LA LF+ AGNVEMVE
Sbjct: 62 FLKSVAISSEFGQEEDVFGDGDEPSFSPDLQLFVGNLPFNVNSAQLADLFKSAGNVEMVE 121
Query: 925 VIYDKITGRSRGFGFVTMSTIEEVEAAAQQFNGYELDGRPLRVN----------XXXXXX 776
V YDK+TGRSRGFGFVTMSTIEEVEAA+QQFNGYELDGRPLRVN
Sbjct: 122 VKYDKVTGRSRGFGFVTMSTIEEVEAASQQFNGYELDGRPLRVNSGPPPQRETSFSRLPQ 181
Query: 775 XXXXXXXXXXXXSGSNFDSENRVYVGNLSWGVDDLALETLFGEQGKVMDAKVVYDRESGR 596
G FDS NRVYVGNLSW VDD ALE+LF E+GKVMDAKVVYDR+SGR
Sbjct: 182 RENSFSRGPGARGGETFDSSNRVYVGNLSWNVDDSALESLFREKGKVMDAKVVYDRDSGR 241
Query: 595 SRGFGFVTYGSAEEVNNAIESLNGVDLEGRSIRVSAAEAKPPRR 464
S+GFGFVTY SAEEV +A++SLNG +L+GR+IRVS AEAKP RR
Sbjct: 242 SKGFGFVTYSSAEEVEDAVDSLNGAELDGRAIRVSVAEAKPRRR 285
Score = 77.4 bits (189), Expect = 1e-11
Identities = 41/101 (40%), Positives = 61/101 (60%)
Frame = -2
Query: 730 NFDSENRVYVGNLSWGVDDLALETLFGEQGKVMDAKVVYDRESGRSRGFGFVTYGSAEEV 551
+F + +++VGNL + V+ L LF G V +V YD+ +GRSRGFGFVT + EEV
Sbjct: 86 SFSPDLQLFVGNLPFNVNSAQLADLFKSAGNVEMVEVKYDKVTGRSRGFGFVTMSTIEEV 145
Query: 550 NNAIESLNGVDLEGRSIRVSAAEAKPPRRQF*LLNQQQKEN 428
A + NG +L+GR +RV++ PP+R+ Q+EN
Sbjct: 146 EAASQQFNGYELDGRPLRVNS--GPPPQRETSFSRLPQREN 184
>ref|XP_006428769.1| hypothetical protein CICLE_v10012331mg [Citrus clementina]
gi|557530826|gb|ESR42009.1| hypothetical protein
CICLE_v10012331mg [Citrus clementina]
Length = 263
Score = 288 bits (736), Expect = 5e-75
Identities = 160/246 (65%), Positives = 178/246 (72%), Gaps = 9/246 (3%)
Frame = -2
Query: 1234 PKTLALSTSQTPSLSL-------KLHPNPISTSHPXXXXXXXXXXXXXXRFVRNVAVTSE 1076
PKTLA S+ S SL KL PIS S FVRNVAV+SE
Sbjct: 16 PKTLAFYNSKPTSFSLLSSSSSHKLLAKPISISSSFIHSFQPLPSSPSR-FVRNVAVSSE 74
Query: 1075 FEQDEEVSNDRRQQNFSPELKLFVGNLPFNVDSADLAGLFEQAGNVEMVEVIYDKITGRS 896
F+Q+E++ +D NFSP+LKLFVGNLPF+VDSA LAGLFE AGNVEMVEVIYDK+TGRS
Sbjct: 75 FDQEEDLLSDEDGSNFSPDLKLFVGNLPFSVDSAQLAGLFETAGNVEMVEVIYDKVTGRS 134
Query: 895 RGFGFVTMSTIEEVEAAAQQFNGYELDGRPLRVNXXXXXXXXXXXXXXXXXXSGSNFDSE 716
RGFGFVTMS++EEVEAAAQQFNGYEL+GRPLRVN G+ S
Sbjct: 135 RGFGFVTMSSVEEVEAAAQQFNGYELEGRPLRVNSGPPPPRREEFSPRGPRGGGAGAPSS 194
Query: 715 --NRVYVGNLSWGVDDLALETLFGEQGKVMDAKVVYDRESGRSRGFGFVTYGSAEEVNNA 542
NRVYVGNLSWGVDDLALETLF EQGKV++AKVVYDRESGRSRGFGFVTY SAEEV+NA
Sbjct: 195 GGNRVYVGNLSWGVDDLALETLFREQGKVLEAKVVYDRESGRSRGFGFVTYSSAEEVDNA 254
Query: 541 IESLNG 524
I+SLNG
Sbjct: 255 IDSLNG 260
Score = 90.5 bits (223), Expect = 2e-15
Identities = 53/126 (42%), Positives = 73/126 (57%)
Frame = -2
Query: 736 GSNFDSENRVYVGNLSWGVDDLALETLFGEQGKVMDAKVVYDRESGRSRGFGFVTYGSAE 557
GSNF + +++VGNL + VD L LF G V +V+YD+ +GRSRGFGFVT S E
Sbjct: 87 GSNFSPDLKLFVGNLPFSVDSAQLAGLFETAGNVEMVEVIYDKVTGRSRGFGFVTMSSVE 146
Query: 556 EVNNAIESLNGVDLEGRSIRVSAAEAKPPRRQF*LLNQQQKENMGTCSSLHDCIWMCCLS 377
EV A + NG +LEGR +RV++ PPRR+ + G SS + +++ LS
Sbjct: 147 EVEAAAQQFNGYELEGRPLRVNSG-PPPPRREEFSPRGPRGGGAGAPSSGGNRVYVGNLS 205
Query: 376 SSTDDL 359
DDL
Sbjct: 206 WGVDDL 211
Score = 65.9 bits (159), Expect = 4e-08
Identities = 31/64 (48%), Positives = 43/64 (67%)
Frame = -2
Query: 1015 KLFVGNLPFNVDSADLAGLFEQAGNVEMVEVIYDKITGRSRGFGFVTMSTIEEVEAAAQQ 836
+++VGNL + VD L LF + G V +V+YD+ +GRSRGFGFVT S+ EEV+ A
Sbjct: 198 RVYVGNLSWGVDDLALETLFREQGKVLEAKVVYDRESGRSRGFGFVTYSSAEEVDNAIDS 257
Query: 835 FNGY 824
NG+
Sbjct: 258 LNGF 261
>sp|P49313.1|ROC1_NICPL RecName: Full=30 kDa ribonucleoprotein, chloroplastic; AltName:
Full=CP-RBP30; Flags: Precursor gi|19708|emb|CAA46234.1|
RNA binding protein 30 [Nicotiana plumbaginifolia]
Length = 279
Score = 287 bits (735), Expect = 7e-75
Identities = 168/272 (61%), Positives = 192/272 (70%), Gaps = 13/272 (4%)
Frame = -2
Query: 1234 PKTLALS--TSQTPSLSL-KLHPNPISTSHPXXXXXXXXXXXXXXRFVRNVAVTSEFEQD 1064
P+TL L TSQT SLS L P+ ++ S RFVR V + +F+Q
Sbjct: 15 PQTLLLPKPTSQTTSLSFFSLPPSSLNLS------LSSPSSCFSSRFVRKVTLP-DFDQI 67
Query: 1063 EEVSND----RRQQNFSPELKLFVGNLPFNVDSADLAGLFEQAGNVEMVEVIYDKITGRS 896
E+V + ++NFSP+LK+FVGNL F+ DSA LA LFE+AGNVEMVEVIYDK+TGRS
Sbjct: 68 EDVEDGDEGVEEERNFSPDLKIFVGNLLFSADSAALAELFERAGNVEMVEVIYDKLTGRS 127
Query: 895 RGFGFVTMSTIEEVEAAAQQFNGYELDGRPLRVNXXXXXXXXXXXXXXXXXXS------G 734
RGFGFVTMS+ EEVEAA QQFNGYELDGR LRVN G
Sbjct: 128 RGFGFVTMSSKEEVEAACQQFNGYELDGRALRVNSGPPPEKRENSSFRENSSFRGGSRGG 187
Query: 733 SNFDSENRVYVGNLSWGVDDLALETLFGEQGKVMDAKVVYDRESGRSRGFGFVTYGSAEE 554
+FDS NRVYVGNL+WGVD ALETLF EQGKV+DAKVVYDR+SGRSRGFGFVTY SAEE
Sbjct: 188 GSFDSSNRVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEE 247
Query: 553 VNNAIESLNGVDLEGRSIRVSAAEAKPPRRQF 458
VNNAIESL+GVDL GR+IRVS AEA+PPRRQF
Sbjct: 248 VNNAIESLDGVDLNGRAIRVSPAEARPPRRQF 279