BLASTX nr result
ID: Paeonia25_contig00005292
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Paeonia25_contig00005292
(3609 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAZ08457.1| RNA polymerase II second largest subunit [Rhodode... 2276 0.0
ref|XP_006347043.1| PREDICTED: DNA-directed RNA polymerase II su... 2268 0.0
ref|NP_001233889.1| DNA-directed RNA polymerase II subunit RPB2 ... 2268 0.0
ref|XP_002519060.1| DNA-directed RNA polymerase II subunit, puta... 2263 0.0
gb|EXC18122.1| DNA-directed RNA polymerase II subunit [Morus not... 2262 0.0
ref|XP_007025631.1| DNA-directed RNA polymerase family protein i... 2258 0.0
ref|XP_004499217.1| PREDICTED: DNA-directed RNA polymerase II su... 2258 0.0
ref|XP_007148168.1| hypothetical protein PHAVU_006G185800g [Phas... 2257 0.0
gb|EYU43393.1| hypothetical protein MIMGU_mgv1a000385mg [Mimulus... 2256 0.0
ref|XP_007214559.1| hypothetical protein PRUPE_ppa000425mg [Prun... 2256 0.0
ref|XP_003533774.1| PREDICTED: DNA-directed RNA polymerase II su... 2254 0.0
ref|XP_006487405.1| PREDICTED: DNA-directed RNA polymerase II su... 2254 0.0
ref|XP_004294022.1| PREDICTED: DNA-directed RNA polymerase II su... 2254 0.0
ref|XP_004134705.1| PREDICTED: DNA-directed RNA polymerase II su... 2254 0.0
ref|XP_006423594.1| hypothetical protein CICLE_v10027701mg [Citr... 2253 0.0
ref|XP_007138707.1| hypothetical protein PHAVU_009G230400g [Phas... 2251 0.0
ref|XP_003547482.1| PREDICTED: DNA-directed RNA polymerase II su... 2250 0.0
ref|XP_003589372.1| DNA-directed RNA polymerase [Medicago trunca... 2248 0.0
gb|AAY89347.1| RNA polymerase II second largest subunit [Petunia... 2248 0.0
ref|XP_002274051.1| PREDICTED: DNA-directed RNA polymerase II su... 2244 0.0
>gb|AAZ08457.1| RNA polymerase II second largest subunit [Rhododendron macrophyllum]
Length = 1191
Score = 2276 bits (5899), Expect = 0.0
Identities = 1120/1173 (95%), Positives = 1150/1173 (98%)
Frame = -2
Query: 3521 DEDEFETPFNDDEDEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADI 3342
+E+E++ D+E+EITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADI
Sbjct: 5 EEEEYDPTMEDEEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADI 64
Query: 3341 EIRPESQHNPGHQPDFAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAP 3162
EIRPESQHNPGHQ DFAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAP
Sbjct: 65 EIRPESQHNPGHQSDFAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAP 124
Query: 3161 LYVDVSKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPY 2982
LYVDV+KRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPY
Sbjct: 125 LYVDVTKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPY 184
Query: 2981 DQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAFVGEVRSMAESQNRPPSGMFVR 2802
DQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYA+V EVRSMAESQNRPPS MFVR
Sbjct: 185 DQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVR 244
Query: 2801 MLSRTSAKGGSSGQYIRATLPYIRAEIPIIIVFRALGFVADKDILEHICYDFSDTQMMEL 2622
MLSRTSAKGGSSGQYIRATLPYIR EIPIIIVFRALGFVADKDILEHICYDF+DTQMMEL
Sbjct: 245 MLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFADTQMMEL 304
Query: 2621 LRPSLEEAFVIQNQQVALDYIGKRGSTVGVTREKRIKYAREILQKEMLPHVGVGEYCETK 2442
LRPSLEEAFVIQNQQVALDYIGKRG+TVGVT+EKRIKYA+EILQKEMLPHVGVGEYCETK
Sbjct: 305 LRPSLEEAFVIQNQQVALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETK 364
Query: 2441 KAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQ 2262
KAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQ
Sbjct: 365 KAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQ 424
Query: 2261 KCVDNGKEVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSH 2082
KCVDNGK+VNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSH
Sbjct: 425 KCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSH 484
Query: 2081 LRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPI 1902
LRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPI
Sbjct: 485 LRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPI 544
Query: 1901 LEFLEEWGTENFEEISPAVIPQSTKIFVNGCWVGIHRDPDMLVKTXXXXXXRVDVNTEVG 1722
LEFLEEWGTENFEEISPAVIPQ+TKIFVNGCWVGIHRDPDMLV+T RVDVNTEVG
Sbjct: 545 LEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIHRDPDMLVRTLRRLRRRVDVNTEVG 604
Query: 1721 VVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRETPDEGGWHDLVAKGF 1542
VVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIK+KDIQALQQRETP++GGWHDLVAKGF
Sbjct: 605 VVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKRKDIQALQQRETPEDGGWHDLVAKGF 664
Query: 1541 IEYVDXXXXXXTMISMTINDLVSARLNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHN 1362
IEY+D TMISMTINDLVSARLNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHN
Sbjct: 665 IEYIDTEEEETTMISMTINDLVSARLNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHN 724
Query: 1361 QSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGIN 1182
QSPRNTYQSAMGKQAMGIYVTNYQFRMDT+AYVLYYPQKPLVTTRAMEHLHFRQLPAGIN
Sbjct: 725 QSPRNTYQSAMGKQAMGIYVTNYQFRMDTVAYVLYYPQKPLVTTRAMEHLHFRQLPAGIN 784
Query: 1181 AIVAISCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRNDT 1002
AIVAI+CYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRP+R +T
Sbjct: 785 AIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANT 844
Query: 1001 MGMRHGSYDKLDDDGLAPPGTRVGGEDVIIGKTTPIAQDEAQGQASRYTKRDHSTSLRHS 822
MGMRHGSYDKLDDDGLAPPGTRV GEDV+IGKTTPIAQDEAQG A+RYT+RDHSTSLRHS
Sbjct: 845 MGMRHGSYDKLDDDGLAPPGTRVSGEDVVIGKTTPIAQDEAQGPAARYTRRDHSTSLRHS 904
Query: 821 ETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVE 642
ETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWT+E
Sbjct: 905 ETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTME 964
Query: 641 GITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGY 462
GITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGY
Sbjct: 965 GITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGY 1024
Query: 461 QMRGFETMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSR 282
QMRGFETMYNGHTGRRL++MIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSR
Sbjct: 1025 QMRGFETMYNGHTGRRLTSMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSR 1084
Query: 281 DGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGC 102
DGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYR+HVCERCGLIAIANLKKNSFECRGC
Sbjct: 1085 DGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRIHVCERCGLIAIANLKKNSFECRGC 1144
Query: 101 KNKTDIVQVHIPYACKLLFQELMSMAIAPRMLT 3
KNKTDIVQVHIPYACKLLFQELMSMAIAPRMLT
Sbjct: 1145 KNKTDIVQVHIPYACKLLFQELMSMAIAPRMLT 1177
>ref|XP_006347043.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2-like [Solanum
tuberosum]
Length = 1191
Score = 2268 bits (5877), Expect = 0.0
Identities = 1122/1174 (95%), Positives = 1146/1174 (97%), Gaps = 2/1174 (0%)
Frame = -2
Query: 3518 EDEFETPFN--DDEDEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESAD 3345
EDE+E +N DDE+EITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESAD
Sbjct: 4 EDEYEPQYNVDDDEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESAD 63
Query: 3344 IEIRPESQHNPGHQPDFAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSA 3165
IEIRPESQHNPGHQ DFAETIYKI+FGQIYLSKPMMTESDGETATLFPKAARLRNLTYSA
Sbjct: 64 IEIRPESQHNPGHQSDFAETIYKINFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSA 123
Query: 3164 PLYVDVSKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECP 2985
PLYVDV+KRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECP
Sbjct: 124 PLYVDVTKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECP 183
Query: 2984 YDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAFVGEVRSMAESQNRPPSGMFV 2805
DQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAFV EVRSMAESQNRPPS MFV
Sbjct: 184 LDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAFVAEVRSMAESQNRPPSTMFV 243
Query: 2804 RMLSRTSAKGGSSGQYIRATLPYIRAEIPIIIVFRALGFVADKDILEHICYDFSDTQMME 2625
RMLSRTSAKGGSSGQYIRATLPYIR EIPIIIVFRALGFVADKDILEHICYDF+DTQMME
Sbjct: 244 RMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFNDTQMME 303
Query: 2624 LLRPSLEEAFVIQNQQVALDYIGKRGSTVGVTREKRIKYAREILQKEMLPHVGVGEYCET 2445
LLRPSLEEAFVIQNQQVALDYIGKRG+TVGVTREKRIKYA+EILQKEMLPHVGVGEYCET
Sbjct: 304 LLRPSLEEAFVIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEYCET 363
Query: 2444 KKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYV 2265
KKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYV
Sbjct: 364 KKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYV 423
Query: 2264 QKCVDNGKEVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLS 2085
QKCVDNGK+VNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLS
Sbjct: 424 QKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLS 483
Query: 2084 HLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYP 1905
HLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYP
Sbjct: 484 HLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYP 543
Query: 1904 ILEFLEEWGTENFEEISPAVIPQSTKIFVNGCWVGIHRDPDMLVKTXXXXXXRVDVNTEV 1725
ILEFLEEWGTENFEEISPAVIPQ+TKIFVNG WVGIHRDPDMLV+T RVDVNTEV
Sbjct: 544 ILEFLEEWGTENFEEISPAVIPQATKIFVNGTWVGIHRDPDMLVRTLRRLRRRVDVNTEV 603
Query: 1724 GVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRETPDEGGWHDLVAKG 1545
GVVRDIRLKELRIYTDYGRCSRPLFIVEKQRL+IKKKDIQ LQQRE+PDEGGWHDLVAKG
Sbjct: 604 GVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLMIKKKDIQTLQQRESPDEGGWHDLVAKG 663
Query: 1544 FIEYVDXXXXXXTMISMTINDLVSARLNPEEAYSETYTHCEIHPSLILGVCASIIPFPDH 1365
+IEY+D TMISMTINDLV ARLNP +AYS+TYTHCEIHPSLILGVCASIIPFPDH
Sbjct: 664 YIEYIDTEEEETTMISMTINDLVQARLNPGDAYSDTYTHCEIHPSLILGVCASIIPFPDH 723
Query: 1364 NQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGI 1185
NQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGI
Sbjct: 724 NQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGI 783
Query: 1184 NAIVAISCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRND 1005
NAIVAISCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRP+R
Sbjct: 784 NAIVAISCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRAT 843
Query: 1004 TMGMRHGSYDKLDDDGLAPPGTRVGGEDVIIGKTTPIAQDEAQGQASRYTKRDHSTSLRH 825
TMGMRHGSYDKLDDDGLAPPGTRV GEDVIIGKTTPI+QD+AQGQASRYT++DHSTSLRH
Sbjct: 844 TMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPISQDDAQGQASRYTRKDHSTSLRH 903
Query: 824 SETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTV 645
SETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTV
Sbjct: 904 SETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTV 963
Query: 644 EGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCG 465
EGI+PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCG
Sbjct: 964 EGISPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCG 1023
Query: 464 YQMRGFETMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRS 285
YQMRGFETMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRS
Sbjct: 1024 YQMRGFETMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRS 1083
Query: 284 RDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRG 105
RDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRG
Sbjct: 1084 RDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRG 1143
Query: 104 CKNKTDIVQVHIPYACKLLFQELMSMAIAPRMLT 3
CKNKTDIVQVHIPYACKLLFQELM+MAIAPRMLT
Sbjct: 1144 CKNKTDIVQVHIPYACKLLFQELMAMAIAPRMLT 1177
>ref|NP_001233889.1| DNA-directed RNA polymerase II subunit RPB2 [Solanum lycopersicum]
gi|11134656|sp|Q42877.1|RPB2_SOLLC RecName:
Full=DNA-directed RNA polymerase II subunit RPB2;
Short=RNA polymerase II subunit 2; Short=RNA polymerase
II subunit B2; AltName: Full=DNA-directed RNA polymerase
II 135 kDa polypeptide gi|1049068|gb|AAC49273.1| RNA
polymerase II subunit 2 [Solanum lycopersicum]
Length = 1191
Score = 2268 bits (5876), Expect = 0.0
Identities = 1121/1174 (95%), Positives = 1146/1174 (97%), Gaps = 2/1174 (0%)
Frame = -2
Query: 3518 EDEFETPFN--DDEDEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESAD 3345
EDE+E +N DDE+EITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESAD
Sbjct: 4 EDEYEPQYNVDDDEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESAD 63
Query: 3344 IEIRPESQHNPGHQPDFAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSA 3165
IEIRPESQHNPGHQ DFAETIYKI+FGQIYLSKPMMTESDGETATLFPKAARLRNLTYSA
Sbjct: 64 IEIRPESQHNPGHQSDFAETIYKINFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSA 123
Query: 3164 PLYVDVSKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECP 2985
PLYVDV+KRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECP
Sbjct: 124 PLYVDVTKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECP 183
Query: 2984 YDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAFVGEVRSMAESQNRPPSGMFV 2805
DQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAFV EVRSMA++QNRPPS MFV
Sbjct: 184 LDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAFVAEVRSMADTQNRPPSTMFV 243
Query: 2804 RMLSRTSAKGGSSGQYIRATLPYIRAEIPIIIVFRALGFVADKDILEHICYDFSDTQMME 2625
RMLSRTSAKGGSSGQYIRATLPYIR EIPIIIVFRALGFVADKDILEHICYDF+DTQMME
Sbjct: 244 RMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFNDTQMME 303
Query: 2624 LLRPSLEEAFVIQNQQVALDYIGKRGSTVGVTREKRIKYAREILQKEMLPHVGVGEYCET 2445
LLRPSLEEAFVIQNQQVALDYIGKRG+TVGVTREKRIKYA+EILQKEMLPHVGVGEYCET
Sbjct: 304 LLRPSLEEAFVIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEYCET 363
Query: 2444 KKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYV 2265
KKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYV
Sbjct: 364 KKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYV 423
Query: 2264 QKCVDNGKEVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLS 2085
QKCVDNGK+VNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLS
Sbjct: 424 QKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLS 483
Query: 2084 HLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYP 1905
HLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYP
Sbjct: 484 HLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYP 543
Query: 1904 ILEFLEEWGTENFEEISPAVIPQSTKIFVNGCWVGIHRDPDMLVKTXXXXXXRVDVNTEV 1725
ILEFLEEWGTENFEEISPAVIPQ+TKIFVNG WVGIHRDPDMLV+T RVDVNTEV
Sbjct: 544 ILEFLEEWGTENFEEISPAVIPQATKIFVNGTWVGIHRDPDMLVRTLRRLRRRVDVNTEV 603
Query: 1724 GVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRETPDEGGWHDLVAKG 1545
GVVRDIRLKELRIYTDYGRCSRPLFIVEKQRL+IKKKDIQ LQQRE+PDEGGWHDLVAKG
Sbjct: 604 GVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLMIKKKDIQTLQQRESPDEGGWHDLVAKG 663
Query: 1544 FIEYVDXXXXXXTMISMTINDLVSARLNPEEAYSETYTHCEIHPSLILGVCASIIPFPDH 1365
+IEY+D TMISMTINDLV ARLNP +AYS+TYTHCEIHPSLILGVCASIIPFPDH
Sbjct: 664 YIEYIDTEEEETTMISMTINDLVQARLNPGDAYSDTYTHCEIHPSLILGVCASIIPFPDH 723
Query: 1364 NQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGI 1185
NQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGI
Sbjct: 724 NQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGI 783
Query: 1184 NAIVAISCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRND 1005
NAIVAISCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRP+R
Sbjct: 784 NAIVAISCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRAS 843
Query: 1004 TMGMRHGSYDKLDDDGLAPPGTRVGGEDVIIGKTTPIAQDEAQGQASRYTKRDHSTSLRH 825
TMGMRHGSYDKLDDDGLAPPGTRV GEDVIIGKTTPI+QD+AQGQASRYT++DHSTSLRH
Sbjct: 844 TMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPISQDDAQGQASRYTRKDHSTSLRH 903
Query: 824 SETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTV 645
SETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTV
Sbjct: 904 SETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTV 963
Query: 644 EGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCG 465
EGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCG
Sbjct: 964 EGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCG 1023
Query: 464 YQMRGFETMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRS 285
YQMRGFETMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRS
Sbjct: 1024 YQMRGFETMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRS 1083
Query: 284 RDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRG 105
RDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRG
Sbjct: 1084 RDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRG 1143
Query: 104 CKNKTDIVQVHIPYACKLLFQELMSMAIAPRMLT 3
CKNKTDIVQVHIPYACKLLFQELM+MAIAPRMLT
Sbjct: 1144 CKNKTDIVQVHIPYACKLLFQELMAMAIAPRMLT 1177
>ref|XP_002519060.1| DNA-directed RNA polymerase II subunit, putative [Ricinus communis]
gi|223541723|gb|EEF43271.1| DNA-directed RNA polymerase
II subunit, putative [Ricinus communis]
Length = 1194
Score = 2263 bits (5863), Expect = 0.0
Identities = 1119/1178 (94%), Positives = 1146/1178 (97%), Gaps = 5/1178 (0%)
Frame = -2
Query: 3521 DEDEFETPFNDD-----EDEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVD 3357
D+ E++ N+D EDEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVD
Sbjct: 3 DDQEYDQNLNEDYEDEDEDEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVD 62
Query: 3356 ESADIEIRPESQHNPGHQPDFAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNL 3177
ESADIEIRPESQHNPGHQ DFAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNL
Sbjct: 63 ESADIEIRPESQHNPGHQSDFAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNL 122
Query: 3176 TYSAPLYVDVSKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTEL 2997
TYSAPLYVDV+KRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTEL
Sbjct: 123 TYSAPLYVDVTKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTEL 182
Query: 2996 GECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAFVGEVRSMAESQNRPPS 2817
GECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYA+V EVRSMAESQNRPPS
Sbjct: 183 GECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPS 242
Query: 2816 GMFVRMLSRTSAKGGSSGQYIRATLPYIRAEIPIIIVFRALGFVADKDILEHICYDFSDT 2637
MFVRMLSRTSAKGGSSGQYIRATLPYIR EIPIIIVFRALGFVADKDILEHICYDFSDT
Sbjct: 243 TMFVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDT 302
Query: 2636 QMMELLRPSLEEAFVIQNQQVALDYIGKRGSTVGVTREKRIKYAREILQKEMLPHVGVGE 2457
QMMELLRPSLEEAFVIQNQQVALDYIGKRG+TVGVT+EKRIKYA+EILQKEMLPHVGVGE
Sbjct: 303 QMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGE 362
Query: 2456 YCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDV 2277
YCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDV
Sbjct: 363 YCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDV 422
Query: 2276 RGYVQKCVDNGKEVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYA 2097
R YVQKCVDNGK+VNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYA
Sbjct: 423 RSYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYA 482
Query: 2096 STLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGS 1917
STLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGS
Sbjct: 483 STLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGS 542
Query: 1916 AAYPILEFLEEWGTENFEEISPAVIPQSTKIFVNGCWVGIHRDPDMLVKTXXXXXXRVDV 1737
AAYPILEFLEEWGTENFEEISPAVIPQ+TKIFVNGCWVGIHRDPDMLVKT RVDV
Sbjct: 543 AAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIHRDPDMLVKTLRRLRRRVDV 602
Query: 1736 NTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRETPDEGGWHDL 1557
NTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDI ALQQRE+ +EGGWHDL
Sbjct: 603 NTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIHALQQRESSEEGGWHDL 662
Query: 1556 VAKGFIEYVDXXXXXXTMISMTINDLVSARLNPEEAYSETYTHCEIHPSLILGVCASIIP 1377
VAKGFIEY+D TMISMTI+DLV AR+NPEEAYS+TYTHCEIHPSLILGVCASIIP
Sbjct: 663 VAKGFIEYIDTEEEETTMISMTIHDLVQARINPEEAYSDTYTHCEIHPSLILGVCASIIP 722
Query: 1376 FPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQL 1197
FPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQL
Sbjct: 723 FPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQL 782
Query: 1196 PAGINAIVAISCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRP 1017
PAGINAIVAI+CYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRP
Sbjct: 783 PAGINAIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRP 842
Query: 1016 NRNDTMGMRHGSYDKLDDDGLAPPGTRVGGEDVIIGKTTPIAQDEAQGQASRYTKRDHST 837
+R +TMGMRHGSYDKLDDDGLAPPGTRV GEDVIIGKTTPIAQ+EAQGQ++RYT+RDHS
Sbjct: 843 DRANTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPIAQEEAQGQSARYTRRDHSI 902
Query: 836 SLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDM 657
SLRHSETG+VDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDM
Sbjct: 903 SLRHSETGIVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDM 962
Query: 656 PWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKAL 477
PWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKAL
Sbjct: 963 PWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKAL 1022
Query: 476 HKCGYQMRGFETMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPA 297
HKCGYQMRGFETMYNGHTGRRL+AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPA
Sbjct: 1023 HKCGYQMRGFETMYNGHTGRRLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPA 1082
Query: 296 EGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSF 117
EGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSF
Sbjct: 1083 EGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSF 1142
Query: 116 ECRGCKNKTDIVQVHIPYACKLLFQELMSMAIAPRMLT 3
ECRGCKNKTDIVQVHIPYACKLLFQELM+MAIAPRMLT
Sbjct: 1143 ECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRMLT 1180
>gb|EXC18122.1| DNA-directed RNA polymerase II subunit [Morus notabilis]
Length = 1193
Score = 2262 bits (5862), Expect = 0.0
Identities = 1118/1177 (94%), Positives = 1147/1177 (97%), Gaps = 4/1177 (0%)
Frame = -2
Query: 3521 DEDEFETPFNDDED---EITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDES 3351
D+ E++ +NDD+D EITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDES
Sbjct: 3 DDHEYDQQYNDDDDDDEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDES 62
Query: 3350 ADIEIRPESQHNPGHQPDFAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTY 3171
ADIEIRPESQHNPGHQ DF ETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTY
Sbjct: 63 ADIEIRPESQHNPGHQSDFVETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTY 122
Query: 3170 SAPLYVDVSKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGE 2991
SAPLYVDV+KRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGE
Sbjct: 123 SAPLYVDVTKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGE 182
Query: 2990 CPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAFVGEVRSMAESQNRPPSGM 2811
CPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYA+V EVRSMAESQNRPPS M
Sbjct: 183 CPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTM 242
Query: 2810 FVRMLSRTSAKGGSSGQYIRATLPYIRAEIPIIIVFRALGFVADKDILEHICYDFSDTQM 2631
FVRMLSRTS+KGGSSGQYIRATLPYIRAEIPIIIVFRALGFVADKDILEHICYDFSDTQM
Sbjct: 243 FVRMLSRTSSKGGSSGQYIRATLPYIRAEIPIIIVFRALGFVADKDILEHICYDFSDTQM 302
Query: 2630 MELLRPSLEEAFVIQNQQVALDYIGKRGSTVGVTREKRIKYAREILQKEMLPHVGVGEYC 2451
MELLRPSLEEAFVIQNQQVALDYIGKRG+TVGVT+EKRIKYA+EILQKEMLPHVG GE+C
Sbjct: 303 MELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGTGEFC 362
Query: 2450 ETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRG 2271
ETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRG
Sbjct: 363 ETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRG 422
Query: 2270 YVQKCVDNGKEVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYAST 2091
YVQKCVDNGK+VNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYAST
Sbjct: 423 YVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYAST 482
Query: 2090 LSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAA 1911
LSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAA
Sbjct: 483 LSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAA 542
Query: 1910 YPILEFLEEWGTENFEEISPAVIPQSTKIFVNGCWVGIHRDPDMLVKTXXXXXXRVDVNT 1731
YPILEFLEEWGTENFEEISPAVIPQ+TKIFVNGCWVGIHRDPDMLVKT RVDVNT
Sbjct: 543 YPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIHRDPDMLVKTLRRLRRRVDVNT 602
Query: 1730 EVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRETPDEGGWHDLVA 1551
EVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKK+DI+ALQQRETP+E GWHDLV+
Sbjct: 603 EVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKRDIRALQQRETPEEAGWHDLVS 662
Query: 1550 KGFIEYVDXXXXXXTMISMTINDLVSARLNPEEAYSETYTHCEIHPSLILGVCASIIPFP 1371
GFIEY+D TMISMTINDLV ARLNPEEAYSETYTHCEIHPSLILGVCASIIPFP
Sbjct: 663 NGFIEYIDTEEEETTMISMTINDLVQARLNPEEAYSETYTHCEIHPSLILGVCASIIPFP 722
Query: 1370 DHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPA 1191
DHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPA
Sbjct: 723 DHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPA 782
Query: 1190 GINAIVAISCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNR 1011
GINAIVAI+CYSGYNQEDSVIMNQS+IDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRP+R
Sbjct: 783 GINAIVAIACYSGYNQEDSVIMNQSAIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDR 842
Query: 1010 NDTMGMRHGSYDKLDDDGLAPPGTRVGGEDVIIGKTTPIAQDEAQGQ-ASRYTKRDHSTS 834
++TMGMRHGSYDKLDDDGLAPPGTRV GEDVIIGKTTPIAQDEAQGQ ASRYT+RDHS S
Sbjct: 843 SNTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPIAQDEAQGQAASRYTRRDHSIS 902
Query: 833 LRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMP 654
LRHSE G+VDQVLLTTNADGLRFVKVRVRS+RIPQIGDKFSSRHGQKGTVGMTYTQEDMP
Sbjct: 903 LRHSENGIVDQVLLTTNADGLRFVKVRVRSIRIPQIGDKFSSRHGQKGTVGMTYTQEDMP 962
Query: 653 WTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALH 474
WTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALH
Sbjct: 963 WTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALH 1022
Query: 473 KCGYQMRGFETMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAE 294
KCGYQMRGFETMYNGHTGRRL+AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAE
Sbjct: 1023 KCGYQMRGFETMYNGHTGRRLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAE 1082
Query: 293 GRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFE 114
GRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFE
Sbjct: 1083 GRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFE 1142
Query: 113 CRGCKNKTDIVQVHIPYACKLLFQELMSMAIAPRMLT 3
CRGCKNKTDIVQVHIPYACKLLFQELM+MAIAPRMLT
Sbjct: 1143 CRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRMLT 1179
>ref|XP_007025631.1| DNA-directed RNA polymerase family protein isoform 1 [Theobroma
cacao] gi|508780997|gb|EOY28253.1| DNA-directed RNA
polymerase family protein isoform 1 [Theobroma cacao]
Length = 1189
Score = 2258 bits (5852), Expect = 0.0
Identities = 1116/1175 (94%), Positives = 1145/1175 (97%), Gaps = 2/1175 (0%)
Frame = -2
Query: 3521 DEDEFETPFNDDED--EITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESA 3348
D+ E++ DDED EITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESA
Sbjct: 3 DDSEYDPQLMDDEDDEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESA 62
Query: 3347 DIEIRPESQHNPGHQPDFAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYS 3168
DIEIRPESQHNPGHQ DFAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYS
Sbjct: 63 DIEIRPESQHNPGHQSDFAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYS 122
Query: 3167 APLYVDVSKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGEC 2988
APLYVDV+KRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGEC
Sbjct: 123 APLYVDVTKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGEC 182
Query: 2987 PYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAFVGEVRSMAESQNRPPSGMF 2808
PYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYA+V EVRSMAESQNRPPS MF
Sbjct: 183 PYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMF 242
Query: 2807 VRMLSRTSAKGGSSGQYIRATLPYIRAEIPIIIVFRALGFVADKDILEHICYDFSDTQMM 2628
VRMLSRTSAKGGSSGQYIRATLPYIR EIPIIIVFRALGFVADKDILEHICYDFSDTQMM
Sbjct: 243 VRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTQMM 302
Query: 2627 ELLRPSLEEAFVIQNQQVALDYIGKRGSTVGVTREKRIKYAREILQKEMLPHVGVGEYCE 2448
ELLRPSLEEAFVIQNQQVALDYIGKRG+TVGVTREKRIKYA+EILQKEMLPHVGVG++CE
Sbjct: 303 ELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGDFCE 362
Query: 2447 TKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGY 2268
TKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVR Y
Sbjct: 363 TKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSY 422
Query: 2267 VQKCVDNGKEVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTL 2088
VQKCVDNGK+VNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTL
Sbjct: 423 VQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTL 482
Query: 2087 SHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAY 1908
SHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAY
Sbjct: 483 SHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAY 542
Query: 1907 PILEFLEEWGTENFEEISPAVIPQSTKIFVNGCWVGIHRDPDMLVKTXXXXXXRVDVNTE 1728
PILEFLEEWGTENFEEISPAVIPQ+TKIFVNGCWVG+HR+PDMLV T RVDVNTE
Sbjct: 543 PILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGVHRNPDMLVTTLRRLRRRVDVNTE 602
Query: 1727 VGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRETPDEGGWHDLVAK 1548
VGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDI ALQQRE+P++GGWHDLVAK
Sbjct: 603 VGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIHALQQRESPEDGGWHDLVAK 662
Query: 1547 GFIEYVDXXXXXXTMISMTINDLVSARLNPEEAYSETYTHCEIHPSLILGVCASIIPFPD 1368
GFIEY+D TMISMTINDLV AR+NPEEAYSETYTHCEIHPSLILGVCASIIPFPD
Sbjct: 663 GFIEYIDTEEEETTMISMTINDLVQARVNPEEAYSETYTHCEIHPSLILGVCASIIPFPD 722
Query: 1367 HNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAG 1188
HNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAG
Sbjct: 723 HNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAG 782
Query: 1187 INAIVAISCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRN 1008
INAIVAI+CYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRP+R
Sbjct: 783 INAIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRA 842
Query: 1007 DTMGMRHGSYDKLDDDGLAPPGTRVGGEDVIIGKTTPIAQDEAQGQASRYTKRDHSTSLR 828
+TMGMRHGSYDKLDDDGLAPPGTRV GEDVIIGKTTPI+Q+EAQGQASRY++RDHS SLR
Sbjct: 843 NTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPISQEEAQGQASRYSRRDHSISLR 902
Query: 827 HSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWT 648
HSETG+VDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWT
Sbjct: 903 HSETGIVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWT 962
Query: 647 VEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKC 468
VEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNIS+ALHKC
Sbjct: 963 VEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISRALHKC 1022
Query: 467 GYQMRGFETMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGR 288
GYQMRGFETMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGR
Sbjct: 1023 GYQMRGFETMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGR 1082
Query: 287 SRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECR 108
SRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECR
Sbjct: 1083 SRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECR 1142
Query: 107 GCKNKTDIVQVHIPYACKLLFQELMSMAIAPRMLT 3
GCKNKTDIVQV+IPYACKLLFQELM+MAIAPRMLT
Sbjct: 1143 GCKNKTDIVQVYIPYACKLLFQELMAMAIAPRMLT 1177
>ref|XP_004499217.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2-like [Cicer
arietinum]
Length = 1194
Score = 2258 bits (5850), Expect = 0.0
Identities = 1115/1180 (94%), Positives = 1150/1180 (97%), Gaps = 4/1180 (0%)
Frame = -2
Query: 3530 MDVDED-EFETPF---NDDEDEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEI 3363
MD+DE+ E++ DDE+EITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEI
Sbjct: 1 MDLDEEQEYDQQMMDEEDDEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEI 60
Query: 3362 VDESADIEIRPESQHNPGHQPDFAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLR 3183
VDESADIEIRPESQHNPGHQ DFAETIYKISFGQIYLSKPMMTESDGET+TLFPKAARLR
Sbjct: 61 VDESADIEIRPESQHNPGHQSDFAETIYKISFGQIYLSKPMMTESDGETSTLFPKAARLR 120
Query: 3182 NLTYSAPLYVDVSKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLT 3003
NLTYSAPLYVDVSKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTL+QNSEKDLT
Sbjct: 121 NLTYSAPLYVDVSKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLFQNSEKDLT 180
Query: 3002 ELGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAFVGEVRSMAESQNRP 2823
ELGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYA+V EVRSMAESQNRP
Sbjct: 181 ELGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRP 240
Query: 2822 PSGMFVRMLSRTSAKGGSSGQYIRATLPYIRAEIPIIIVFRALGFVADKDILEHICYDFS 2643
PS MFVRMLSRTS+KGGSSGQYIRATLPYIR EIPIIIVFRALGFVADKDILEHICYDFS
Sbjct: 241 PSTMFVRMLSRTSSKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFS 300
Query: 2642 DTQMMELLRPSLEEAFVIQNQQVALDYIGKRGSTVGVTREKRIKYAREILQKEMLPHVGV 2463
DTQMMELLRPSLEEAFVIQNQQVALDYIGKRG+TVGVT+EKRIKYA++ILQ+EMLPHVGV
Sbjct: 301 DTQMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTKEKRIKYAKDILQREMLPHVGV 360
Query: 2462 GEYCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTR 2283
GEYCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTR
Sbjct: 361 GEYCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTR 420
Query: 2282 DVRGYVQKCVDNGKEVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLT 2103
DVRGYVQKCVDNGK+VNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLT
Sbjct: 421 DVRGYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLT 480
Query: 2102 YASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITV 1923
YASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITV
Sbjct: 481 YASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITV 540
Query: 1922 GSAAYPILEFLEEWGTENFEEISPAVIPQSTKIFVNGCWVGIHRDPDMLVKTXXXXXXRV 1743
GSAAYPILEFLEEWGTENFEEISPAVIPQ+TKIFVNGCW+GIHRDPDMLV+T RV
Sbjct: 541 GSAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWMGIHRDPDMLVRTLRKLRRRV 600
Query: 1742 DVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRETPDEGGWH 1563
DVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIV+KQRLLIKKKDI +LQQRE+P+EGGWH
Sbjct: 601 DVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVDKQRLLIKKKDIHSLQQRESPEEGGWH 660
Query: 1562 DLVAKGFIEYVDXXXXXXTMISMTINDLVSARLNPEEAYSETYTHCEIHPSLILGVCASI 1383
DLV+KGFIEY+D TMISMTINDLV ARLNPEEAYS+TYTHCEIHPSLILGVCASI
Sbjct: 661 DLVSKGFIEYIDTEEEETTMISMTINDLVQARLNPEEAYSDTYTHCEIHPSLILGVCASI 720
Query: 1382 IPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFR 1203
IPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFR
Sbjct: 721 IPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFR 780
Query: 1202 QLPAGINAIVAISCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFG 1023
QLPAGINAIVAISCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFG
Sbjct: 781 QLPAGINAIVAISCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFG 840
Query: 1022 RPNRNDTMGMRHGSYDKLDDDGLAPPGTRVGGEDVIIGKTTPIAQDEAQGQASRYTKRDH 843
RP+R +TMGMRHGSYDKLDDDGLAPPGTRV GEDVIIGKTTP++Q+EAQGQA+RY+KRDH
Sbjct: 841 RPDRANTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPLSQEEAQGQAARYSKRDH 900
Query: 842 STSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQE 663
S SLRHSETG+VDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQE
Sbjct: 901 SISLRHSETGIVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQE 960
Query: 662 DMPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISK 483
DMPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISK
Sbjct: 961 DMPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISK 1020
Query: 482 ALHKCGYQMRGFETMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQ 303
ALHKCGYQMRGFETMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQ
Sbjct: 1021 ALHKCGYQMRGFETMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQ 1080
Query: 302 PAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKN 123
PAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCE CGLIAIANLKKN
Sbjct: 1081 PAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCEHCGLIAIANLKKN 1140
Query: 122 SFECRGCKNKTDIVQVHIPYACKLLFQELMSMAIAPRMLT 3
SFECRGCKNKTDIVQV+IPYACKLLFQELM+MAIAPRMLT
Sbjct: 1141 SFECRGCKNKTDIVQVYIPYACKLLFQELMAMAIAPRMLT 1180
>ref|XP_007148168.1| hypothetical protein PHAVU_006G185800g [Phaseolus vulgaris]
gi|561021391|gb|ESW20162.1| hypothetical protein
PHAVU_006G185800g [Phaseolus vulgaris]
Length = 1194
Score = 2257 bits (5848), Expect = 0.0
Identities = 1116/1180 (94%), Positives = 1149/1180 (97%), Gaps = 4/1180 (0%)
Frame = -2
Query: 3530 MDVDED-EFETPF---NDDEDEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEI 3363
MD++E+ E++ DDED+ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEI
Sbjct: 1 MDLEEEQEYDQQMMEEEDDEDDITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEI 60
Query: 3362 VDESADIEIRPESQHNPGHQPDFAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLR 3183
VDESADIEIRPESQHNPGHQ DFAETIY+ISFGQIYLSKPMMTESDGETATLFPKAARLR
Sbjct: 61 VDESADIEIRPESQHNPGHQSDFAETIYRISFGQIYLSKPMMTESDGETATLFPKAARLR 120
Query: 3182 NLTYSAPLYVDVSKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLT 3003
NLTYSAPLYVDVSKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLT
Sbjct: 121 NLTYSAPLYVDVSKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLT 180
Query: 3002 ELGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAFVGEVRSMAESQNRP 2823
ELGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYA+V EVRSMAESQNRP
Sbjct: 181 ELGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRP 240
Query: 2822 PSGMFVRMLSRTSAKGGSSGQYIRATLPYIRAEIPIIIVFRALGFVADKDILEHICYDFS 2643
PS MFVRMLSRTS+KGGSSGQYIRATLPYIR EIPIIIVFRALGFVADKDILEHICYDFS
Sbjct: 241 PSTMFVRMLSRTSSKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFS 300
Query: 2642 DTQMMELLRPSLEEAFVIQNQQVALDYIGKRGSTVGVTREKRIKYAREILQKEMLPHVGV 2463
DTQMMELLRPSLEEAFVIQNQQVALDYIGKRG+TVGVT+EKRIKYA+EILQKEMLPHVGV
Sbjct: 301 DTQMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGV 360
Query: 2462 GEYCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTR 2283
GEYCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTR
Sbjct: 361 GEYCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTR 420
Query: 2282 DVRGYVQKCVDNGKEVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLT 2103
DVRGYVQKCVDNGK+VNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLT
Sbjct: 421 DVRGYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLT 480
Query: 2102 YASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITV 1923
+ASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITV
Sbjct: 481 FASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITV 540
Query: 1922 GSAAYPILEFLEEWGTENFEEISPAVIPQSTKIFVNGCWVGIHRDPDMLVKTXXXXXXRV 1743
GSAAYPILEFLEEWGTENFEEISPAVIPQ+TKIFVNG W+GIHRDPDMLV+T RV
Sbjct: 541 GSAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGSWMGIHRDPDMLVRTLRKLRRRV 600
Query: 1742 DVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRETPDEGGWH 1563
DVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIV+KQRLLIKK+DI ALQQRE+P+EGGWH
Sbjct: 601 DVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVDKQRLLIKKRDIHALQQRESPEEGGWH 660
Query: 1562 DLVAKGFIEYVDXXXXXXTMISMTINDLVSARLNPEEAYSETYTHCEIHPSLILGVCASI 1383
DLV+KGFIEY+D TMISMTINDLV ARLNPE+AYS+TYTHCEIHPSLILGVCASI
Sbjct: 661 DLVSKGFIEYIDTEEEETTMISMTINDLVQARLNPEDAYSDTYTHCEIHPSLILGVCASI 720
Query: 1382 IPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFR 1203
IPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFR
Sbjct: 721 IPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFR 780
Query: 1202 QLPAGINAIVAISCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFG 1023
QLPAGINAIVAI+CYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFG
Sbjct: 781 QLPAGINAIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFG 840
Query: 1022 RPNRNDTMGMRHGSYDKLDDDGLAPPGTRVGGEDVIIGKTTPIAQDEAQGQASRYTKRDH 843
RP+R +TMGMRHGSYDKLDDDGLAPPGTRV GEDVIIGKTTPI+Q+EAQGQA RYT+RDH
Sbjct: 841 RPDRTNTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPISQEEAQGQALRYTRRDH 900
Query: 842 STSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQE 663
S SLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQE
Sbjct: 901 SISLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQE 960
Query: 662 DMPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISK 483
DMPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISK
Sbjct: 961 DMPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISK 1020
Query: 482 ALHKCGYQMRGFETMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQ 303
ALHKCGYQMRGFETMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQ
Sbjct: 1021 ALHKCGYQMRGFETMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQ 1080
Query: 302 PAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKN 123
PAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKN
Sbjct: 1081 PAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKN 1140
Query: 122 SFECRGCKNKTDIVQVHIPYACKLLFQELMSMAIAPRMLT 3
SFECRGCKNKTDIVQV+IPYACKLLFQELM+MAIAPRMLT
Sbjct: 1141 SFECRGCKNKTDIVQVYIPYACKLLFQELMAMAIAPRMLT 1180
>gb|EYU43393.1| hypothetical protein MIMGU_mgv1a000385mg [Mimulus guttatus]
Length = 1197
Score = 2256 bits (5847), Expect = 0.0
Identities = 1114/1183 (94%), Positives = 1149/1183 (97%), Gaps = 7/1183 (0%)
Frame = -2
Query: 3530 MDVDEDEFETPFND------DEDEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQ 3369
MD+DE+ +E + D DE+EITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQ
Sbjct: 1 MDMDEEFYEQGYPDEEFEEEDEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQ 60
Query: 3368 EIVDESADIEIRPESQHNPGHQPDFAETIYKISFGQIYLSKPMMTESDGETATLFPKAAR 3189
EIVDESADIEIRPESQHNPGHQPDFAETIYKISFGQIYLSKPMMTESDGETATLFPKAAR
Sbjct: 61 EIVDESADIEIRPESQHNPGHQPDFAETIYKISFGQIYLSKPMMTESDGETATLFPKAAR 120
Query: 3188 LRNLTYSAPLYVDVSKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKD 3009
LRNLTYSAPLYVDV+KRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKD
Sbjct: 121 LRNLTYSAPLYVDVTKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKD 180
Query: 3008 LTELGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAFVGEVRSMAESQN 2829
LTELGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYA+V EVRSMAE+QN
Sbjct: 181 LTELGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAETQN 240
Query: 2828 RPPSGMFVRMLSRTSAKGGSSGQYIRATLPYIRAEIPIIIVFRALGFVADKDILEHICYD 2649
RPPS MF+RML+RTSAKGGSSGQYIRATLPYIR+EIPIIIVFRALGFVADKDILEHICY+
Sbjct: 241 RPPSTMFIRMLARTSAKGGSSGQYIRATLPYIRSEIPIIIVFRALGFVADKDILEHICYN 300
Query: 2648 FSDTQMMELLRPSLEEAFVIQNQQVALDYIGKRGSTVGVTREKRIKYAREILQKEMLPHV 2469
F DTQMMELLRPSLEEAFVIQNQQVALDYIGKRG+TVGVTR++RIKYA+EILQKEMLPHV
Sbjct: 301 FQDTQMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTRDRRIKYAKEILQKEMLPHV 360
Query: 2468 GVGEYCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKL 2289
GVGEYCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKL
Sbjct: 361 GVGEYCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKL 420
Query: 2288 TRDVRGYVQKCVDNGKEVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNR 2109
TRDVRGYVQKCVDNGK+VNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNR
Sbjct: 421 TRDVRGYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNR 480
Query: 2108 LTYASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYI 1929
LTYASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYI
Sbjct: 481 LTYASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYI 540
Query: 1928 TVGSAAYPILEFLEEWGTENFEEISPAVIPQSTKIFVNGCWVGIHRDPDMLVKTXXXXXX 1749
TVGSAAYPILEFLEEWGTENFEEISPAVIPQ+TKIFVNGCWVGIHR+PDMLV T
Sbjct: 541 TVGSAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIHRNPDMLVSTLRRLRR 600
Query: 1748 RVDVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRETPDEGG 1569
RVDVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRE+PD+GG
Sbjct: 601 RVDVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRESPDDGG 660
Query: 1568 WHDLVAKGFIEYVDXXXXXXTMISMTINDLVSARLNPEEAYSETYTHCEIHPSLILGVCA 1389
WHDLVAKGFIEY+D TMISMTINDLVSAR+NP EAYS+TYTHCEIHPSLILGVCA
Sbjct: 661 WHDLVAKGFIEYIDTEEEETTMISMTINDLVSARINPGEAYSDTYTHCEIHPSLILGVCA 720
Query: 1388 SIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLH 1209
SIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLH
Sbjct: 721 SIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLH 780
Query: 1208 FRQLPAGINAIVAISCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKED 1029
FRQLPAGINAIVAISCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKED
Sbjct: 781 FRQLPAGINAIVAISCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKED 840
Query: 1028 FGRPNRNDTMGMRHGSYDKLDDDGLAPPGTRVGGEDVIIGKTTPIAQDEAQGQA-SRYTK 852
FGRP+R +TMGMRHGSYDKLDDDGLAPPGTRV GEDVIIGKTTPI DEAQGQA +RYTK
Sbjct: 841 FGRPDRANTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPITPDEAQGQANARYTK 900
Query: 851 RDHSTSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTY 672
RDHSTSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTY
Sbjct: 901 RDHSTSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTY 960
Query: 671 TQEDMPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDN 492
TQEDMPWT+EGI PDIIVNPHAIPSRMTIGQLIEC+MGKVAAHMGKEGDATPFTDVTVDN
Sbjct: 961 TQEDMPWTLEGINPDIIVNPHAIPSRMTIGQLIECVMGKVAAHMGKEGDATPFTDVTVDN 1020
Query: 491 ISKALHKCGYQMRGFETMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQIL 312
ISKALHKCGYQMRG+ETMYNGHTGR+L++MIFLGPTYYQRLKHMVDDKIHSRGRGPVQIL
Sbjct: 1021 ISKALHKCGYQMRGYETMYNGHTGRKLTSMIFLGPTYYQRLKHMVDDKIHSRGRGPVQIL 1080
Query: 311 TRQPAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANL 132
TRQPAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYR+HVCE+CGLIAIANL
Sbjct: 1081 TRQPAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRIHVCEKCGLIAIANL 1140
Query: 131 KKNSFECRGCKNKTDIVQVHIPYACKLLFQELMSMAIAPRMLT 3
KKNSFECR CKNKTDIVQVHIPYACKLLFQELMSMAIAPRMLT
Sbjct: 1141 KKNSFECRACKNKTDIVQVHIPYACKLLFQELMSMAIAPRMLT 1183
>ref|XP_007214559.1| hypothetical protein PRUPE_ppa000425mg [Prunus persica]
gi|462410424|gb|EMJ15758.1| hypothetical protein
PRUPE_ppa000425mg [Prunus persica]
Length = 1192
Score = 2256 bits (5847), Expect = 0.0
Identities = 1115/1178 (94%), Positives = 1146/1178 (97%), Gaps = 2/1178 (0%)
Frame = -2
Query: 3530 MDVDEDEFETPFNDD-EDEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDE 3354
MD + + + +NDD EDEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDE
Sbjct: 1 MDEEPEYDDQQYNDDDEDEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDE 60
Query: 3353 SADIEIRPESQHNPGHQPDFAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLT 3174
SADIEIRPESQHNPGHQPDFAET Y+I FGQIYLSKPMMTESDGETATLFPKAARLRNLT
Sbjct: 61 SADIEIRPESQHNPGHQPDFAETTYRIKFGQIYLSKPMMTESDGETATLFPKAARLRNLT 120
Query: 3173 YSAPLYVDVSKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELG 2994
YSAPLYVDVSK ++KKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELG
Sbjct: 121 YSAPLYVDVSKSIVKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELG 180
Query: 2993 ECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAFVGEVRSMAESQNRPPSG 2814
ECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYA+V EVRSMAESQNRPPS
Sbjct: 181 ECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPST 240
Query: 2813 MFVRMLSRTSAKGGSSGQYIRATLPYIRAEIPIIIVFRALGFVADKDILEHICYDFSDTQ 2634
MFVRML+RTS+KGGSSGQYIRATLPYIRAEIPIIIVFRALGFVADKDILEHICYDFSDTQ
Sbjct: 241 MFVRMLARTSSKGGSSGQYIRATLPYIRAEIPIIIVFRALGFVADKDILEHICYDFSDTQ 300
Query: 2633 MMELLRPSLEEAFVIQNQQVALDYIGKRGSTVGVTREKRIKYAREILQKEMLPHVGVGEY 2454
MMELLRPSLEEAFVIQNQQVALDYIGKRG+TVGV+REKRIKYA+EILQKEMLPHVGVGE+
Sbjct: 301 MMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVSREKRIKYAKEILQKEMLPHVGVGEF 360
Query: 2453 CETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVR 2274
CETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVR
Sbjct: 361 CETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVR 420
Query: 2273 GYVQKCVDNGKEVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYAS 2094
GYVQKCVDNGKE+NLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYAS
Sbjct: 421 GYVQKCVDNGKELNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYAS 480
Query: 2093 TLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSA 1914
TLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSA
Sbjct: 481 TLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSA 540
Query: 1913 AYPILEFLEEWGTENFEEISPAVIPQSTKIFVNGCWVGIHRDPDMLVKTXXXXXXRVDVN 1734
AYPILEFLEEWGTENFEEISPAVIPQ+TKIFVNGCWVGIHRDP+MLVKT RVDVN
Sbjct: 541 AYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIHRDPEMLVKTLRKLRRRVDVN 600
Query: 1733 TEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRETPDEGGWHDLV 1554
TEVGVVRDIRLKELRIYTDYGRCSRPLFIV+KQRLLIKKKDI ALQQRE P++GGWHDLV
Sbjct: 601 TEVGVVRDIRLKELRIYTDYGRCSRPLFIVDKQRLLIKKKDIHALQQRENPEDGGWHDLV 660
Query: 1553 AKGFIEYVDXXXXXXTMISMTINDLVSARLNPEEAYSETYTHCEIHPSLILGVCASIIPF 1374
AKGFIEY+D TMISMTINDLV ARLNPEEAYS+TYTHCEIHPSLILGVCASIIPF
Sbjct: 661 AKGFIEYIDTEEEETTMISMTINDLVQARLNPEEAYSDTYTHCEIHPSLILGVCASIIPF 720
Query: 1373 PDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLP 1194
PDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLP
Sbjct: 721 PDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLP 780
Query: 1193 AGINAIVAISCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPN 1014
AGINAIVAISCYSGYNQEDSVIMNQSSIDRGFFRS+FFRSYRDEEKKMGTLVKEDFGRP+
Sbjct: 781 AGINAIVAISCYSGYNQEDSVIMNQSSIDRGFFRSIFFRSYRDEEKKMGTLVKEDFGRPD 840
Query: 1013 RNDTMGMRHGSYDKLDDDGLAPPGTRVGGEDVIIGKTTPIAQDEAQGQ-ASRYTKRDHST 837
R +TMGMRHGSYDKLDDDGLAPPGTRV GEDVIIGKTTP+AQDEAQGQ ASRYT+RDHS
Sbjct: 841 RANTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPMAQDEAQGQAASRYTRRDHSI 900
Query: 836 SLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDM 657
SLRHSETG+VDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDM
Sbjct: 901 SLRHSETGIVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDM 960
Query: 656 PWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKAL 477
PWTVEG+TPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNIS+AL
Sbjct: 961 PWTVEGVTPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISRAL 1020
Query: 476 HKCGYQMRGFETMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPA 297
H CGYQMRGFETMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPA
Sbjct: 1021 HSCGYQMRGFETMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPA 1080
Query: 296 EGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSF 117
EGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSF
Sbjct: 1081 EGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSF 1140
Query: 116 ECRGCKNKTDIVQVHIPYACKLLFQELMSMAIAPRMLT 3
ECRGCKNKTDIVQV+IPYACKLLFQELMSMAIAPRMLT
Sbjct: 1141 ECRGCKNKTDIVQVYIPYACKLLFQELMSMAIAPRMLT 1178
>ref|XP_003533774.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2-like [Glycine
max]
Length = 1192
Score = 2254 bits (5841), Expect = 0.0
Identities = 1115/1180 (94%), Positives = 1146/1180 (97%), Gaps = 4/1180 (0%)
Frame = -2
Query: 3530 MDVDE----DEFETPFNDDEDEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEI 3363
MD++E DE DDE+EITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEI
Sbjct: 1 MDLEEEQEYDEQMMEEEDDEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEI 60
Query: 3362 VDESADIEIRPESQHNPGHQPDFAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLR 3183
VDESADIEIRPESQHNPGHQ DFAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLR
Sbjct: 61 VDESADIEIRPESQHNPGHQSDFAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLR 120
Query: 3182 NLTYSAPLYVDVSKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLT 3003
NLTYSAPLYVDVSKRVIKKGHDGEEVTE QDFTKVFIGKVPIMLRSSYCTLYQNSEKDLT
Sbjct: 121 NLTYSAPLYVDVSKRVIKKGHDGEEVTEAQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLT 180
Query: 3002 ELGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAFVGEVRSMAESQNRP 2823
ELGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYA+V EVRSMAESQNRP
Sbjct: 181 ELGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRP 240
Query: 2822 PSGMFVRMLSRTSAKGGSSGQYIRATLPYIRAEIPIIIVFRALGFVADKDILEHICYDFS 2643
PS MFVRMLSRTS+KGGSSGQYIRATLPYIR EIPIIIVFRALGFVADKDILEHICYDFS
Sbjct: 241 PSTMFVRMLSRTSSKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFS 300
Query: 2642 DTQMMELLRPSLEEAFVIQNQQVALDYIGKRGSTVGVTREKRIKYAREILQKEMLPHVGV 2463
TQMMELLRPSLEEAFVIQNQQVALDYIGKRG+TVGVT+EKRIKYA+EILQKEMLPHVGV
Sbjct: 301 YTQMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGV 360
Query: 2462 GEYCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTR 2283
GEYCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTR
Sbjct: 361 GEYCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTR 420
Query: 2282 DVRGYVQKCVDNGKEVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLT 2103
DVRGYVQKCVDNGK+VNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLT
Sbjct: 421 DVRGYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLT 480
Query: 2102 YASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITV 1923
YASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITV
Sbjct: 481 YASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITV 540
Query: 1922 GSAAYPILEFLEEWGTENFEEISPAVIPQSTKIFVNGCWVGIHRDPDMLVKTXXXXXXRV 1743
GSAAYPILEFLEEWGTENFEEISPAVIPQ+TKIFVNGCW+GIHRDPDMLV+T RV
Sbjct: 541 GSAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWMGIHRDPDMLVRTLKKLRRRV 600
Query: 1742 DVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRETPDEGGWH 1563
DVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIV+KQRLLIKKKDI ALQQRE+P++GGWH
Sbjct: 601 DVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVDKQRLLIKKKDIHALQQRESPEDGGWH 660
Query: 1562 DLVAKGFIEYVDXXXXXXTMISMTINDLVSARLNPEEAYSETYTHCEIHPSLILGVCASI 1383
DLV+KGFIEY+D TMISMTINDLV AR+NPE+AYS+TYTHCEIHPSLILGVCASI
Sbjct: 661 DLVSKGFIEYIDTEEEETTMISMTINDLVQARINPEDAYSDTYTHCEIHPSLILGVCASI 720
Query: 1382 IPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFR 1203
IPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFR
Sbjct: 721 IPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFR 780
Query: 1202 QLPAGINAIVAISCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFG 1023
QLPAGINAIV+I+CYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFG
Sbjct: 781 QLPAGINAIVSIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFG 840
Query: 1022 RPNRNDTMGMRHGSYDKLDDDGLAPPGTRVGGEDVIIGKTTPIAQDEAQGQASRYTKRDH 843
RP+R +TMGMRHGSYDKLDDDGLAPPGTRV GEDVIIGKTTPI+Q+EAQGQA RYT+RDH
Sbjct: 841 RPDRANTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPISQEEAQGQALRYTRRDH 900
Query: 842 STSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQE 663
S SLRHSETG+VDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQE
Sbjct: 901 SISLRHSETGIVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQE 960
Query: 662 DMPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISK 483
DMPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISK
Sbjct: 961 DMPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISK 1020
Query: 482 ALHKCGYQMRGFETMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQ 303
ALHKCGYQMRGFETMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQ
Sbjct: 1021 ALHKCGYQMRGFETMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQ 1080
Query: 302 PAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKN 123
PAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKN
Sbjct: 1081 PAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKN 1140
Query: 122 SFECRGCKNKTDIVQVHIPYACKLLFQELMSMAIAPRMLT 3
SFECRGCKNKTDIVQV+IPYACKLLFQELM+MAIAPRMLT
Sbjct: 1141 SFECRGCKNKTDIVQVYIPYACKLLFQELMAMAIAPRMLT 1180
>ref|XP_006487405.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2-like [Citrus
sinensis]
Length = 1195
Score = 2254 bits (5840), Expect = 0.0
Identities = 1114/1180 (94%), Positives = 1146/1180 (97%), Gaps = 3/1180 (0%)
Frame = -2
Query: 3533 MMDVD---EDEFETPFNDDEDEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEI 3363
MM+ D E++ + D+E+EITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEI
Sbjct: 1 MMEDDYDYEEQHQQEEEDEEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEI 60
Query: 3362 VDESADIEIRPESQHNPGHQPDFAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLR 3183
VDESADIEIRPESQHNPG Q DFAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLR
Sbjct: 61 VDESADIEIRPESQHNPGQQSDFAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLR 120
Query: 3182 NLTYSAPLYVDVSKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLT 3003
NLTYSAPLYVDV+KRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLT
Sbjct: 121 NLTYSAPLYVDVTKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLT 180
Query: 3002 ELGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAFVGEVRSMAESQNRP 2823
ELGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYA+V EVRSMAESQNRP
Sbjct: 181 ELGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRP 240
Query: 2822 PSGMFVRMLSRTSAKGGSSGQYIRATLPYIRAEIPIIIVFRALGFVADKDILEHICYDFS 2643
PS MFVRMLSRTSAKGGSSGQYIRATLPYIR EIPIIIVFRALGFVADKDILEHICYDF
Sbjct: 241 PSTMFVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFQ 300
Query: 2642 DTQMMELLRPSLEEAFVIQNQQVALDYIGKRGSTVGVTREKRIKYAREILQKEMLPHVGV 2463
DTQMMELLRPSLEEAFVIQNQQVALDYIGKRG+TVGVTR+KRIKYA+EILQKEMLPHVG
Sbjct: 301 DTQMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTRDKRIKYAKEILQKEMLPHVGT 360
Query: 2462 GEYCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTR 2283
G++CETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTR
Sbjct: 361 GDFCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTR 420
Query: 2282 DVRGYVQKCVDNGKEVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLT 2103
DVR YVQKCVDNGK+VNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLT
Sbjct: 421 DVRAYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLT 480
Query: 2102 YASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITV 1923
YASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITV
Sbjct: 481 YASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITV 540
Query: 1922 GSAAYPILEFLEEWGTENFEEISPAVIPQSTKIFVNGCWVGIHRDPDMLVKTXXXXXXRV 1743
GSAAYPILEFLEEWGTENFEEISPAVIPQ+TKIFVNGCWVGIHRDP+MLVKT RV
Sbjct: 541 GSAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIHRDPEMLVKTLRRLRRRV 600
Query: 1742 DVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRETPDEGGWH 1563
DVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKK+DI ALQQRE+P++GGWH
Sbjct: 601 DVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKRDIIALQQRESPEDGGWH 660
Query: 1562 DLVAKGFIEYVDXXXXXXTMISMTINDLVSARLNPEEAYSETYTHCEIHPSLILGVCASI 1383
DLVAKGFIEY+D TMISMTINDLV ARL+PEEAY++TYTHCEIHPSLILGVCASI
Sbjct: 661 DLVAKGFIEYIDTEEEETTMISMTINDLVQARLHPEEAYADTYTHCEIHPSLILGVCASI 720
Query: 1382 IPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFR 1203
IPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFR
Sbjct: 721 IPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFR 780
Query: 1202 QLPAGINAIVAISCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFG 1023
QLPAGINAIVAI+CYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFG
Sbjct: 781 QLPAGINAIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFG 840
Query: 1022 RPNRNDTMGMRHGSYDKLDDDGLAPPGTRVGGEDVIIGKTTPIAQDEAQGQASRYTKRDH 843
RP+R++TMGMRHGSYDKLDDDGLAPPGTRV GEDVIIGKTTPI+QDEAQGQASRYT+RDH
Sbjct: 841 RPDRSNTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPISQDEAQGQASRYTRRDH 900
Query: 842 STSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQE 663
S SLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQE
Sbjct: 901 SISLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQE 960
Query: 662 DMPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISK 483
DMPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISK
Sbjct: 961 DMPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISK 1020
Query: 482 ALHKCGYQMRGFETMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQ 303
ALHKCGYQMRGFETMYNGHTGRRL+AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQ
Sbjct: 1021 ALHKCGYQMRGFETMYNGHTGRRLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQ 1080
Query: 302 PAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKN 123
PAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCE CGLIAIANLKKN
Sbjct: 1081 PAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCEHCGLIAIANLKKN 1140
Query: 122 SFECRGCKNKTDIVQVHIPYACKLLFQELMSMAIAPRMLT 3
SFECRGCKNKTDIVQVHIPYACKLLFQELM+MAIAPRMLT
Sbjct: 1141 SFECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRMLT 1180
>ref|XP_004294022.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2-like [Fragaria
vesca subsp. vesca]
Length = 1191
Score = 2254 bits (5840), Expect = 0.0
Identities = 1113/1176 (94%), Positives = 1145/1176 (97%), Gaps = 3/1176 (0%)
Frame = -2
Query: 3521 DEDEFETPFNDD--EDEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESA 3348
+E E+E +NDD EDEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDE+A
Sbjct: 3 EEPEYEEQYNDDDDEDEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDEAA 62
Query: 3347 DIEIRPESQHNPGHQPDFAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYS 3168
DIEIRPESQHNPGHQPDFAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYS
Sbjct: 63 DIEIRPESQHNPGHQPDFAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYS 122
Query: 3167 APLYVDVSKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGEC 2988
APLYVDVSKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGEC
Sbjct: 123 APLYVDVSKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGEC 182
Query: 2987 PYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAFVGEVRSMAESQNRPPSGMF 2808
PYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYA+VGEVRSMAESQNRPPS MF
Sbjct: 183 PYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVGEVRSMAESQNRPPSTMF 242
Query: 2807 VRMLSRTSAKGGSSGQYIRATLPYIRAEIPIIIVFRALGFVADKDILEHICYDFSDTQMM 2628
VRMLSRTS+KGGSSGQYIRATLPYIRAEIPIIIVFRALGFVADKDILEHICYDF+DTQMM
Sbjct: 243 VRMLSRTSSKGGSSGQYIRATLPYIRAEIPIIIVFRALGFVADKDILEHICYDFADTQMM 302
Query: 2627 ELLRPSLEEAFVIQNQQVALDYIGKRGSTVGVTREKRIKYAREILQKEMLPHVGVGEYCE 2448
ELLRPSLEEAFVIQNQQVALDYIGKRG+T GV R+KRI+YAR+ILQKEMLPHVG GE+CE
Sbjct: 303 ELLRPSLEEAFVIQNQQVALDYIGKRGATAGVPRDKRIRYARDILQKEMLPHVGTGEFCE 362
Query: 2447 TKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGY 2268
TKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLG LFR LFRKLT+DV+GY
Sbjct: 363 TKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGSLFRSLFRKLTKDVKGY 422
Query: 2267 VQKCVDNGKEVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTL 2088
VQKCVDNGK+VNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTL
Sbjct: 423 VQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTL 482
Query: 2087 SHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAY 1908
SHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAY
Sbjct: 483 SHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAY 542
Query: 1907 PILEFLEEWGTENFEEISPAVIPQSTKIFVNGCWVGIHRDPDMLVKTXXXXXXRVDVNTE 1728
PILEFLEEWGTENFEEISPAVIPQ+TKIFVNGCWVGIHRDP+MLV+T RVDVNTE
Sbjct: 543 PILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIHRDPEMLVRTLRKLRRRVDVNTE 602
Query: 1727 VGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRETPDEGGWHDLVAK 1548
VGVVRDIRLKELRIYTDYGRCSRPLFIV+KQRLLIKKKDI ALQQRE P++GGWHDLVAK
Sbjct: 603 VGVVRDIRLKELRIYTDYGRCSRPLFIVDKQRLLIKKKDIHALQQRENPEDGGWHDLVAK 662
Query: 1547 GFIEYVDXXXXXXTMISMTINDLVSARLNPEEAYSETYTHCEIHPSLILGVCASIIPFPD 1368
GFIEY+D TMISMTINDLV ARLNPEEAYS+TYTHCEIHPSLILGVCASIIPFPD
Sbjct: 663 GFIEYIDTEEEETTMISMTINDLVQARLNPEEAYSDTYTHCEIHPSLILGVCASIIPFPD 722
Query: 1367 HNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAG 1188
HNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAG
Sbjct: 723 HNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAG 782
Query: 1187 INAIVAISCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRN 1008
INAIVAISCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRP+R
Sbjct: 783 INAIVAISCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRA 842
Query: 1007 DTMGMRHGSYDKLDDDGLAPPGTRVGGEDVIIGKTTPIAQDEAQGQ-ASRYTKRDHSTSL 831
+TMGMRHGSYDKL+DDGLAPPGTRV GEDVIIGKTTPIA +EAQGQ ASRY++RDHS SL
Sbjct: 843 NTMGMRHGSYDKLEDDGLAPPGTRVSGEDVIIGKTTPIAPEEAQGQAASRYSRRDHSISL 902
Query: 830 RHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPW 651
RHSETG+VDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPW
Sbjct: 903 RHSETGIVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPW 962
Query: 650 TVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHK 471
TVEG+TPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHK
Sbjct: 963 TVEGVTPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHK 1022
Query: 470 CGYQMRGFETMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEG 291
CGYQMRGFETMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEG
Sbjct: 1023 CGYQMRGFETMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEG 1082
Query: 290 RSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFEC 111
RSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFEC
Sbjct: 1083 RSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFEC 1142
Query: 110 RGCKNKTDIVQVHIPYACKLLFQELMSMAIAPRMLT 3
RGCKNKTDIVQVHIPYACKLLFQELM+MAIAPRMLT
Sbjct: 1143 RGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRMLT 1178
>ref|XP_004134705.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2-like [Cucumis
sativus] gi|449479313|ref|XP_004155566.1| PREDICTED:
DNA-directed RNA polymerase II subunit RPB2-like [Cucumis
sativus]
Length = 1199
Score = 2254 bits (5840), Expect = 0.0
Identities = 1111/1173 (94%), Positives = 1143/1173 (97%)
Frame = -2
Query: 3521 DEDEFETPFNDDEDEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADI 3342
D+D+ + DDE+EITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADI
Sbjct: 13 DDDDMDQAIPDDEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADI 72
Query: 3341 EIRPESQHNPGHQPDFAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAP 3162
EIRPESQHNPGHQ D AETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAP
Sbjct: 73 EIRPESQHNPGHQSDVAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAP 132
Query: 3161 LYVDVSKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPY 2982
LYVDVSKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPY
Sbjct: 133 LYVDVSKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPY 192
Query: 2981 DQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAFVGEVRSMAESQNRPPSGMFVR 2802
DQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAFV EVRSMAESQNRPPS MFVR
Sbjct: 193 DQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAFVAEVRSMAESQNRPPSTMFVR 252
Query: 2801 MLSRTSAKGGSSGQYIRATLPYIRAEIPIIIVFRALGFVADKDILEHICYDFSDTQMMEL 2622
MLSRTSAKGGSSGQYIRATLPYIR EIPIIIVFRALGFVADKDILEHICYDFSDTQMMEL
Sbjct: 253 MLSRTSAKGGSSGQYIRATLPYIRNEIPIIIVFRALGFVADKDILEHICYDFSDTQMMEL 312
Query: 2621 LRPSLEEAFVIQNQQVALDYIGKRGSTVGVTREKRIKYAREILQKEMLPHVGVGEYCETK 2442
LRPSLEEAFVIQNQQVALDYIGKRGSTVGVT+EKRIKYA+EILQKEMLPHVGVGE+CETK
Sbjct: 313 LRPSLEEAFVIQNQQVALDYIGKRGSTVGVTKEKRIKYAKEILQKEMLPHVGVGEFCETK 372
Query: 2441 KAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQ 2262
KAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQ
Sbjct: 373 KAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQ 432
Query: 2261 KCVDNGKEVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSH 2082
KCVDNGK+VNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSH
Sbjct: 433 KCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSH 492
Query: 2081 LRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPI 1902
LRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPI
Sbjct: 493 LRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPI 552
Query: 1901 LEFLEEWGTENFEEISPAVIPQSTKIFVNGCWVGIHRDPDMLVKTXXXXXXRVDVNTEVG 1722
LEFLEEWGTENFEEISPAVIPQ+TKIFVNGCWVGIHRDP+MLVKT RVDVNTEVG
Sbjct: 553 LEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIHRDPEMLVKTLRRLRRRVDVNTEVG 612
Query: 1721 VVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRETPDEGGWHDLVAKGF 1542
VVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDI ALQQRE+P++GGWHDLVAKGF
Sbjct: 613 VVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIHALQQRESPEDGGWHDLVAKGF 672
Query: 1541 IEYVDXXXXXXTMISMTINDLVSARLNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHN 1362
IEY+D TMISMTI+DL+ AR+NP EAYS+TYTHCEIHPSLILGVCASIIPFPDHN
Sbjct: 673 IEYIDTEEEETTMISMTISDLIQARINPVEAYSDTYTHCEIHPSLILGVCASIIPFPDHN 732
Query: 1361 QSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGIN 1182
QSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGIN
Sbjct: 733 QSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGIN 792
Query: 1181 AIVAISCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRNDT 1002
AIVAI+CYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRP+R++T
Sbjct: 793 AIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRSNT 852
Query: 1001 MGMRHGSYDKLDDDGLAPPGTRVGGEDVIIGKTTPIAQDEAQGQASRYTKRDHSTSLRHS 822
MGMRHGSYDKLDDDGLAPPGTRV GEDVIIGKTTPI+Q+EAQGQA+RY++RDHS SLRHS
Sbjct: 853 MGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPISQEEAQGQAARYSRRDHSISLRHS 912
Query: 821 ETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVE 642
E G+VDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVE
Sbjct: 913 ENGIVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVE 972
Query: 641 GITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGY 462
GITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGY
Sbjct: 973 GITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGY 1032
Query: 461 QMRGFETMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSR 282
QMRGFETMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSR
Sbjct: 1033 QMRGFETMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSR 1092
Query: 281 DGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGC 102
DGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYR+HVCE CGLIAIANLKK+SFECRGC
Sbjct: 1093 DGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRIHVCECCGLIAIANLKKSSFECRGC 1152
Query: 101 KNKTDIVQVHIPYACKLLFQELMSMAIAPRMLT 3
KNKTDIVQV+IPYACKLLFQELM+MAIAPRM T
Sbjct: 1153 KNKTDIVQVYIPYACKLLFQELMAMAIAPRMFT 1185
>ref|XP_006423594.1| hypothetical protein CICLE_v10027701mg [Citrus clementina]
gi|557525528|gb|ESR36834.1| hypothetical protein
CICLE_v10027701mg [Citrus clementina]
Length = 1195
Score = 2253 bits (5837), Expect = 0.0
Identities = 1113/1180 (94%), Positives = 1146/1180 (97%), Gaps = 3/1180 (0%)
Frame = -2
Query: 3533 MMDVD---EDEFETPFNDDEDEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEI 3363
MM+ D E++ + D+E+EITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEI
Sbjct: 1 MMEDDYDYEEQHQQEEEDEEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEI 60
Query: 3362 VDESADIEIRPESQHNPGHQPDFAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLR 3183
VDESADIEIRPESQHNPG Q DFAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLR
Sbjct: 61 VDESADIEIRPESQHNPGQQSDFAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLR 120
Query: 3182 NLTYSAPLYVDVSKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLT 3003
NLTYSAPLYVDV+KRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLT
Sbjct: 121 NLTYSAPLYVDVTKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLT 180
Query: 3002 ELGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAFVGEVRSMAESQNRP 2823
ELGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYA+V EVRSMAESQNRP
Sbjct: 181 ELGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRP 240
Query: 2822 PSGMFVRMLSRTSAKGGSSGQYIRATLPYIRAEIPIIIVFRALGFVADKDILEHICYDFS 2643
PS MFVRMLSRTSAKGGSSGQYIRATLPYIR EIPIIIVFRALGFVADKDILEHICYDF
Sbjct: 241 PSTMFVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFQ 300
Query: 2642 DTQMMELLRPSLEEAFVIQNQQVALDYIGKRGSTVGVTREKRIKYAREILQKEMLPHVGV 2463
DTQMMELLRPSLEEAFVIQNQQVALDYIGKRG+TVGVTR+KRIKYA+EILQKEMLPHVG
Sbjct: 301 DTQMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTRDKRIKYAKEILQKEMLPHVGT 360
Query: 2462 GEYCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTR 2283
G++CETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTR
Sbjct: 361 GDFCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTR 420
Query: 2282 DVRGYVQKCVDNGKEVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLT 2103
DVR YVQKCVDNGK+VNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLT
Sbjct: 421 DVRAYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLT 480
Query: 2102 YASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITV 1923
YASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITV
Sbjct: 481 YASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITV 540
Query: 1922 GSAAYPILEFLEEWGTENFEEISPAVIPQSTKIFVNGCWVGIHRDPDMLVKTXXXXXXRV 1743
GSAAYPILEFLEEWGTENFEEISPAVIPQ+TKIFVNGCWVGIHRDP+MLVKT RV
Sbjct: 541 GSAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIHRDPEMLVKTLRRLRRRV 600
Query: 1742 DVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRETPDEGGWH 1563
DVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKK+DI ALQQRE+P++GGWH
Sbjct: 601 DVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKRDIIALQQRESPEDGGWH 660
Query: 1562 DLVAKGFIEYVDXXXXXXTMISMTINDLVSARLNPEEAYSETYTHCEIHPSLILGVCASI 1383
DLVAKGFIEY+D TMISMTINDLV ARL+PEEAY++TYTHCEIHPSLILGVCASI
Sbjct: 661 DLVAKGFIEYIDTEEEETTMISMTINDLVQARLHPEEAYADTYTHCEIHPSLILGVCASI 720
Query: 1382 IPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFR 1203
IPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFR
Sbjct: 721 IPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFR 780
Query: 1202 QLPAGINAIVAISCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFG 1023
QLPAGINAIVAI+CYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFG
Sbjct: 781 QLPAGINAIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFG 840
Query: 1022 RPNRNDTMGMRHGSYDKLDDDGLAPPGTRVGGEDVIIGKTTPIAQDEAQGQASRYTKRDH 843
RP+R++TMGMRHGSYDKLDDDGLAPPGTRV GEDVIIGKTTPI+QDEAQGQASRYT+RDH
Sbjct: 841 RPDRSNTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPISQDEAQGQASRYTRRDH 900
Query: 842 STSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQE 663
S SLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQE
Sbjct: 901 SISLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQE 960
Query: 662 DMPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISK 483
DMPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISK
Sbjct: 961 DMPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISK 1020
Query: 482 ALHKCGYQMRGFETMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQ 303
ALHKCGYQMRGFETMYNGHTGRRL+AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQ
Sbjct: 1021 ALHKCGYQMRGFETMYNGHTGRRLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQ 1080
Query: 302 PAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKN 123
PAEGRSRDGGLRFGEMERDCMIAHGA+HFLKERLFDQSDAYRVHVCE CGLIAIANLKKN
Sbjct: 1081 PAEGRSRDGGLRFGEMERDCMIAHGASHFLKERLFDQSDAYRVHVCEHCGLIAIANLKKN 1140
Query: 122 SFECRGCKNKTDIVQVHIPYACKLLFQELMSMAIAPRMLT 3
SFECRGCKNKTDIVQVHIPYACKLLFQELM+MAIAPRMLT
Sbjct: 1141 SFECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRMLT 1180
>ref|XP_007138707.1| hypothetical protein PHAVU_009G230400g [Phaseolus vulgaris]
gi|561011794|gb|ESW10701.1| hypothetical protein
PHAVU_009G230400g [Phaseolus vulgaris]
Length = 1196
Score = 2251 bits (5833), Expect = 0.0
Identities = 1111/1175 (94%), Positives = 1143/1175 (97%), Gaps = 3/1175 (0%)
Frame = -2
Query: 3518 EDEFETPFNDDE---DEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESA 3348
EDE+E +DE DEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESA
Sbjct: 4 EDEYEEQMMEDEEEEDEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESA 63
Query: 3347 DIEIRPESQHNPGHQPDFAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYS 3168
DIEIRPESQHNPGHQ D AET+YKISFGQIYLSKPMMTESDGETA+LFPKAARLRNLTYS
Sbjct: 64 DIEIRPESQHNPGHQSDSAETVYKISFGQIYLSKPMMTESDGETASLFPKAARLRNLTYS 123
Query: 3167 APLYVDVSKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGEC 2988
APLYVDVSKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGEC
Sbjct: 124 APLYVDVSKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGEC 183
Query: 2987 PYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAFVGEVRSMAESQNRPPSGMF 2808
PYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYA+V EVRSMAESQNRPPS MF
Sbjct: 184 PYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMF 243
Query: 2807 VRMLSRTSAKGGSSGQYIRATLPYIRAEIPIIIVFRALGFVADKDILEHICYDFSDTQMM 2628
VRMLSRTS+KGGSSGQYIRATLPYIR EIPIIIVFRALGFVADKDILEHICYDFSDTQMM
Sbjct: 244 VRMLSRTSSKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTQMM 303
Query: 2627 ELLRPSLEEAFVIQNQQVALDYIGKRGSTVGVTREKRIKYAREILQKEMLPHVGVGEYCE 2448
+LLRPSLEEAFVIQNQQVALDYIGKRGSTVGVT+EKRIKYA+EILQKEMLPHVG+GEYCE
Sbjct: 304 DLLRPSLEEAFVIQNQQVALDYIGKRGSTVGVTKEKRIKYAKEILQKEMLPHVGIGEYCE 363
Query: 2447 TKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGY 2268
TKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVR Y
Sbjct: 364 TKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRAY 423
Query: 2267 VQKCVDNGKEVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTL 2088
VQKCVDNGK+VNLQFAIKAKT+TSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTL
Sbjct: 424 VQKCVDNGKDVNLQFAIKAKTVTSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTL 483
Query: 2087 SHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAY 1908
SHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAY
Sbjct: 484 SHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAY 543
Query: 1907 PILEFLEEWGTENFEEISPAVIPQSTKIFVNGCWVGIHRDPDMLVKTXXXXXXRVDVNTE 1728
PILEFLEEWGTENFEEISPAVIPQ+TKIFVNGCW+GIHRDPDMLV+T RVDVNTE
Sbjct: 544 PILEFLEEWGTENFEEISPAVIPQATKIFVNGCWMGIHRDPDMLVRTLRKLRRRVDVNTE 603
Query: 1727 VGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRETPDEGGWHDLVAK 1548
VGVVRDIRLKELRIYTDYGRCSRPLFIV++QRLLIKKKDI ALQQRE+P+EGGWHDLV+K
Sbjct: 604 VGVVRDIRLKELRIYTDYGRCSRPLFIVDRQRLLIKKKDIHALQQRESPEEGGWHDLVSK 663
Query: 1547 GFIEYVDXXXXXXTMISMTINDLVSARLNPEEAYSETYTHCEIHPSLILGVCASIIPFPD 1368
GFIEY+D TMISMTINDLV AR+NPEEAYS+TYTHCEIHPSLILGVCASIIPFPD
Sbjct: 664 GFIEYIDTEEEETTMISMTINDLVQARINPEEAYSDTYTHCEIHPSLILGVCASIIPFPD 723
Query: 1367 HNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAG 1188
HNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAG
Sbjct: 724 HNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAG 783
Query: 1187 INAIVAISCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRN 1008
INAIVAISCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRP+R
Sbjct: 784 INAIVAISCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRA 843
Query: 1007 DTMGMRHGSYDKLDDDGLAPPGTRVGGEDVIIGKTTPIAQDEAQGQASRYTKRDHSTSLR 828
+TMGMRHGSYDKLDDDGLAPPGTRV GEDVIIGKTTPI+Q+EAQGQA RYT+RDHS SLR
Sbjct: 844 NTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPISQEEAQGQALRYTRRDHSISLR 903
Query: 827 HSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWT 648
HSETG+VDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWT
Sbjct: 904 HSETGIVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWT 963
Query: 647 VEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKC 468
VEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVD+ISKALHKC
Sbjct: 964 VEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDSISKALHKC 1023
Query: 467 GYQMRGFETMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGR 288
GYQMRGFETMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGR
Sbjct: 1024 GYQMRGFETMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGR 1083
Query: 287 SRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECR 108
SRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCE+CGLIAIANLKKNSFECR
Sbjct: 1084 SRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCEKCGLIAIANLKKNSFECR 1143
Query: 107 GCKNKTDIVQVHIPYACKLLFQELMSMAIAPRMLT 3
GCKNKTDIVQV IPYACKLLFQELM+MAIAPRMLT
Sbjct: 1144 GCKNKTDIVQVFIPYACKLLFQELMAMAIAPRMLT 1178
>ref|XP_003547482.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2-like [Glycine
max]
Length = 1193
Score = 2250 bits (5830), Expect = 0.0
Identities = 1113/1180 (94%), Positives = 1145/1180 (97%), Gaps = 4/1180 (0%)
Frame = -2
Query: 3530 MDVDE----DEFETPFNDDEDEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEI 3363
MD++E DE +DDE+EITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEI
Sbjct: 1 MDLEEEQEYDEQMMEEDDDEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEI 60
Query: 3362 VDESADIEIRPESQHNPGHQPDFAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLR 3183
VDESADIEIRPESQHNPGHQ DFAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLR
Sbjct: 61 VDESADIEIRPESQHNPGHQSDFAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLR 120
Query: 3182 NLTYSAPLYVDVSKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLT 3003
NLTYSAPLYVDVSKRV+KKGHDGEEVTETQD TKVFIGKVPIMLRSSYCTLYQNSEKDLT
Sbjct: 121 NLTYSAPLYVDVSKRVVKKGHDGEEVTETQDLTKVFIGKVPIMLRSSYCTLYQNSEKDLT 180
Query: 3002 ELGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAFVGEVRSMAESQNRP 2823
ELGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYA+V EVRSMAESQNRP
Sbjct: 181 ELGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRP 240
Query: 2822 PSGMFVRMLSRTSAKGGSSGQYIRATLPYIRAEIPIIIVFRALGFVADKDILEHICYDFS 2643
PS MFVRMLSRTS+KGGSSGQYIRATLPYIR EIPIIIVFRALGFVADKDILEHICYDFS
Sbjct: 241 PSTMFVRMLSRTSSKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFS 300
Query: 2642 DTQMMELLRPSLEEAFVIQNQQVALDYIGKRGSTVGVTREKRIKYAREILQKEMLPHVGV 2463
DT MMELLRPSLEEAFVIQNQQVALDYIGKRG+TVGVT+EKRIKYA+EILQKEMLPHVGV
Sbjct: 301 DTLMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGV 360
Query: 2462 GEYCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTR 2283
GEYCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTR
Sbjct: 361 GEYCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTR 420
Query: 2282 DVRGYVQKCVDNGKEVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLT 2103
DVRGYVQKCVDNGK+VNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLT
Sbjct: 421 DVRGYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLT 480
Query: 2102 YASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITV 1923
YASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITV
Sbjct: 481 YASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITV 540
Query: 1922 GSAAYPILEFLEEWGTENFEEISPAVIPQSTKIFVNGCWVGIHRDPDMLVKTXXXXXXRV 1743
GSAAYPILEFLEEWGTENFEEISPAVIPQ+TKIFVNGCW+GIHRDPDMLV+T RV
Sbjct: 541 GSAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWMGIHRDPDMLVRTLRKLRRRV 600
Query: 1742 DVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRETPDEGGWH 1563
DVNTEVGVVRDI LKELRIYTDYGRCSRPLFIV+KQRLLIKKKDI ALQQRE+P++GGWH
Sbjct: 601 DVNTEVGVVRDIILKELRIYTDYGRCSRPLFIVDKQRLLIKKKDIHALQQRESPEDGGWH 660
Query: 1562 DLVAKGFIEYVDXXXXXXTMISMTINDLVSARLNPEEAYSETYTHCEIHPSLILGVCASI 1383
DLV+KGFIEY+D TMISMTINDLV AR+NPE+AY+ TYTHCEIHPSLILGVCASI
Sbjct: 661 DLVSKGFIEYIDTEEEETTMISMTINDLVQARINPEDAYAGTYTHCEIHPSLILGVCASI 720
Query: 1382 IPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFR 1203
IPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFR
Sbjct: 721 IPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFR 780
Query: 1202 QLPAGINAIVAISCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFG 1023
QLPAGINAIVAI+CYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFG
Sbjct: 781 QLPAGINAIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFG 840
Query: 1022 RPNRNDTMGMRHGSYDKLDDDGLAPPGTRVGGEDVIIGKTTPIAQDEAQGQASRYTKRDH 843
RP+R +TMGMRHGSYDKLDDDGLAPPGTRV GEDVIIGKTTPI+Q+EAQGQA RYT+RDH
Sbjct: 841 RPDRANTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPISQEEAQGQALRYTRRDH 900
Query: 842 STSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQE 663
S SLRHSETG+VDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQE
Sbjct: 901 SISLRHSETGIVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQE 960
Query: 662 DMPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISK 483
DMPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISK
Sbjct: 961 DMPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISK 1020
Query: 482 ALHKCGYQMRGFETMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQ 303
ALHKCGYQMRGFETMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQ
Sbjct: 1021 ALHKCGYQMRGFETMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQ 1080
Query: 302 PAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKN 123
PAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKN
Sbjct: 1081 PAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKN 1140
Query: 122 SFECRGCKNKTDIVQVHIPYACKLLFQELMSMAIAPRMLT 3
SFECRGCKNKTDIVQV+IPYACKLLFQELM+MAIAPRMLT
Sbjct: 1141 SFECRGCKNKTDIVQVYIPYACKLLFQELMAMAIAPRMLT 1180
>ref|XP_003589372.1| DNA-directed RNA polymerase [Medicago truncatula]
gi|355478420|gb|AES59623.1| DNA-directed RNA polymerase
[Medicago truncatula]
Length = 1213
Score = 2248 bits (5826), Expect = 0.0
Identities = 1119/1198 (93%), Positives = 1151/1198 (96%), Gaps = 21/1198 (1%)
Frame = -2
Query: 3533 MMDVDED-EFETPFN--DDEDEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEI 3363
MMD++E+ EF+ DDE+EITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEI
Sbjct: 2 MMDLEEENEFDQQMEEEDDEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEI 61
Query: 3362 VDESADIEIRPESQHNPGHQPDFAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLR 3183
VDESADIEIRPESQHNPGHQ DFAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLR
Sbjct: 62 VDESADIEIRPESQHNPGHQSDFAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLR 121
Query: 3182 NLTYSAPLYVDVSKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLT 3003
NLTYSAPLYVDVSKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLT
Sbjct: 122 NLTYSAPLYVDVSKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLT 181
Query: 3002 ELGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAFVGEVRSMAESQNRP 2823
ELGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYA+VGEVRSMAESQNRP
Sbjct: 182 ELGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVGEVRSMAESQNRP 241
Query: 2822 PSGMFVRMLSRTSAKGGSSGQYIRATLPYIRAEIPIIIVFRALGFVADKDILEHICYDFS 2643
PS MFVRMLSR SAKGGSSGQYIRATLPYIR EIPIIIVFRALGFVADKDILEHICYDF+
Sbjct: 242 PSTMFVRMLSRASAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFA 301
Query: 2642 DTQMMELLRPSLEEAFVIQNQQVALDYIGKRGSTVGVTREKRIKYAREILQKEMLPHVGV 2463
DTQMMELLRPSLEEAFVIQNQQVALDYIGKRGSTVGVT+EKRIKYA++ILQKEMLPHVGV
Sbjct: 302 DTQMMELLRPSLEEAFVIQNQQVALDYIGKRGSTVGVTKEKRIKYAKDILQKEMLPHVGV 361
Query: 2462 GEYCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTR 2283
GEYCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTR
Sbjct: 362 GEYCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTR 421
Query: 2282 DVRGYVQKCVDNGKEVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLT 2103
DVRGYVQKCVDNGK+VNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLT
Sbjct: 422 DVRGYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLT 481
Query: 2102 YASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITV 1923
YASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITV
Sbjct: 482 YASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITV 541
Query: 1922 GSAAYPILEFLEEWGTENFE--------EISPAVIPQSTKIFVNGCWVGIHRDPDMLVKT 1767
GSAAYPILEFLEEWGTENFE EISPAVIPQ+TKIFVNGCW+GIHRDPDMLV+T
Sbjct: 542 GSAAYPILEFLEEWGTENFEVLVISFIKEISPAVIPQATKIFVNGCWMGIHRDPDMLVRT 601
Query: 1766 XXXXXXR----------VDVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKK 1617
R VDVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIV+KQRLLIKK
Sbjct: 602 LRKLRRRFSAEGFDVVQVDVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVDKQRLLIKK 661
Query: 1616 KDIQALQQRETPDEGGWHDLVAKGFIEYVDXXXXXXTMISMTINDLVSARLNPEEAYSET 1437
KDI +LQQRE+P++GGWHDLV+KGFIEY+D TMISMTINDLV ARLNPEEAYS+T
Sbjct: 662 KDIHSLQQRESPEDGGWHDLVSKGFIEYIDTEEEETTMISMTINDLVQARLNPEEAYSDT 721
Query: 1436 YTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLY 1257
YTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLY
Sbjct: 722 YTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLY 781
Query: 1256 YPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQEDSVIMNQSSIDRGFFRSLFFR 1077
YPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQEDSVIMNQSSIDRGFFRSLFFR
Sbjct: 782 YPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQEDSVIMNQSSIDRGFFRSLFFR 841
Query: 1076 SYRDEEKKMGTLVKEDFGRPNRNDTMGMRHGSYDKLDDDGLAPPGTRVGGEDVIIGKTTP 897
SYRDEEKKMGTLVKEDFGRP+R +TMGMRHGSYDKLDDDGLAPPGTRV GEDVIIGKTTP
Sbjct: 842 SYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTP 901
Query: 896 IAQDEAQGQASRYTKRDHSTSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDK 717
++Q+E QGQA+RY+KRDHS SLRHSETG+VDQVLLTTNADGLRFVKVRVRSVRIPQIGDK
Sbjct: 902 LSQEEQQGQAARYSKRDHSISLRHSETGIVDQVLLTTNADGLRFVKVRVRSVRIPQIGDK 961
Query: 716 FSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMG 537
FSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMG
Sbjct: 962 FSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMG 1021
Query: 536 KEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRRLSAMIFLGPTYYQRLKHMV 357
KEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRRLSAMIFLGPTYYQRLKHMV
Sbjct: 1022 KEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRRLSAMIFLGPTYYQRLKHMV 1081
Query: 356 DDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYR 177
DDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYR
Sbjct: 1082 DDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYR 1141
Query: 176 VHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQELMSMAIAPRMLT 3
VHVCERCGLIAIANLKKNSFECRGCKNKTDIVQV+IPYACKLLFQELM+MAIAPRMLT
Sbjct: 1142 VHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVYIPYACKLLFQELMAMAIAPRMLT 1199
>gb|AAY89347.1| RNA polymerase II second largest subunit [Petunia x hybrida]
Length = 1195
Score = 2248 bits (5824), Expect = 0.0
Identities = 1111/1178 (94%), Positives = 1143/1178 (97%)
Frame = -2
Query: 3536 EMMDVDEDEFETPFNDDEDEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVD 3357
+ D++ +E E ++E+EITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVD
Sbjct: 8 QQYDMNNEEEE----EEEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVD 63
Query: 3356 ESADIEIRPESQHNPGHQPDFAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNL 3177
ESADIEIRPESQHNPGHQ DFAETIYKI+FGQIYLSKPMMTESDGETATLFPKAARLRNL
Sbjct: 64 ESADIEIRPESQHNPGHQSDFAETIYKINFGQIYLSKPMMTESDGETATLFPKAARLRNL 123
Query: 3176 TYSAPLYVDVSKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTEL 2997
TYSAPLYVDV+KRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTEL
Sbjct: 124 TYSAPLYVDVTKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTEL 183
Query: 2996 GECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAFVGEVRSMAESQNRPPS 2817
GECP DQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAFV EVRSMAESQNRPPS
Sbjct: 184 GECPLDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAFVAEVRSMAESQNRPPS 243
Query: 2816 GMFVRMLSRTSAKGGSSGQYIRATLPYIRAEIPIIIVFRALGFVADKDILEHICYDFSDT 2637
MFVRMLSRTSAKGGSSGQYIRATLPYIR EIPIIIVFRALGFVADKDILEHICYDF+DT
Sbjct: 244 TMFVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFNDT 303
Query: 2636 QMMELLRPSLEEAFVIQNQQVALDYIGKRGSTVGVTREKRIKYAREILQKEMLPHVGVGE 2457
QMMELLRPSLEEAFVIQNQQVALDYIGKRG+TVGVT+EKRIKYA+EILQKEMLPHVGVGE
Sbjct: 304 QMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGE 363
Query: 2456 YCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDV 2277
YCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDV
Sbjct: 364 YCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDV 423
Query: 2276 RGYVQKCVDNGKEVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYA 2097
R YVQKCVDNGK+VNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYA
Sbjct: 424 RSYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYA 483
Query: 2096 STLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGS 1917
STLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGS
Sbjct: 484 STLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGS 543
Query: 1916 AAYPILEFLEEWGTENFEEISPAVIPQSTKIFVNGCWVGIHRDPDMLVKTXXXXXXRVDV 1737
AAYPILEFLEE GTENFEEISPAVIPQ+TKIFV+G W+GIHRDPDMLV+T RVDV
Sbjct: 544 AAYPILEFLEEXGTENFEEISPAVIPQATKIFVBGTWMGIHRDPDMLVRTLRRLRRRVDV 603
Query: 1736 NTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRETPDEGGWHDL 1557
NTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQ+LLIKKKDIQ LQQRETP+EGGWHDL
Sbjct: 604 NTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQKLLIKKKDIQQLQQRETPEEGGWHDL 663
Query: 1556 VAKGFIEYVDXXXXXXTMISMTINDLVSARLNPEEAYSETYTHCEIHPSLILGVCASIIP 1377
VAKG+IEY+D TMISMTINDLV A +NPE+AYS+TYTHCEIHPSLILGVCASIIP
Sbjct: 664 VAKGYIEYIDTEEEETTMISMTINDLVQASINPEDAYSDTYTHCEIHPSLILGVCASIIP 723
Query: 1376 FPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQL 1197
FPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQL
Sbjct: 724 FPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQL 783
Query: 1196 PAGINAIVAISCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRP 1017
PAGINAIVAISCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRP
Sbjct: 784 PAGINAIVAISCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRP 843
Query: 1016 NRNDTMGMRHGSYDKLDDDGLAPPGTRVGGEDVIIGKTTPIAQDEAQGQASRYTKRDHST 837
+R TMGMRHGSYDKLDDDGLAPPGTRV GEDVIIGKTTPI+QD+AQGQASRYT++DHST
Sbjct: 844 DRASTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPISQDDAQGQASRYTRKDHST 903
Query: 836 SLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDM 657
SLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDM
Sbjct: 904 SLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDM 963
Query: 656 PWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKAL 477
PWT+EGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKAL
Sbjct: 964 PWTIEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKAL 1023
Query: 476 HKCGYQMRGFETMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPA 297
HKCGYQMRGFETMYNGHTGRRL AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPA
Sbjct: 1024 HKCGYQMRGFETMYNGHTGRRLPAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPA 1083
Query: 296 EGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSF 117
EGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSF
Sbjct: 1084 EGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSF 1143
Query: 116 ECRGCKNKTDIVQVHIPYACKLLFQELMSMAIAPRMLT 3
ECRGCKNKTDIVQVHIPYACKLLFQELM+MAIAPRMLT
Sbjct: 1144 ECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRMLT 1181
>ref|XP_002274051.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Vitis
vinifera] gi|147841183|emb|CAN72948.1| hypothetical
protein VITISV_033708 [Vitis vinifera]
gi|302143287|emb|CBI21848.3| unnamed protein product
[Vitis vinifera]
Length = 1193
Score = 2244 bits (5814), Expect = 0.0
Identities = 1107/1176 (94%), Positives = 1140/1176 (96%), Gaps = 4/1176 (0%)
Frame = -2
Query: 3518 EDEFETPF----NDDEDEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDES 3351
EDE++ DD++EITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDES
Sbjct: 4 EDEYDPTVVEEEEDDDEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDES 63
Query: 3350 ADIEIRPESQHNPGHQPDFAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTY 3171
ADIEIRPESQHNPG Q DF ETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTY
Sbjct: 64 ADIEIRPESQHNPGRQSDFLETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTY 123
Query: 3170 SAPLYVDVSKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGE 2991
SAPLYVDV+KR+IKKGHD EEVTETQ+FTKVFIGKVPIMLRSSYCT+YQNSEKDLTELGE
Sbjct: 124 SAPLYVDVTKRIIKKGHDLEEVTETQEFTKVFIGKVPIMLRSSYCTVYQNSEKDLTELGE 183
Query: 2990 CPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAFVGEVRSMAESQNRPPSGM 2811
CPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYA+V EVRSMAESQNRPPS M
Sbjct: 184 CPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSSM 243
Query: 2810 FVRMLSRTSAKGGSSGQYIRATLPYIRAEIPIIIVFRALGFVADKDILEHICYDFSDTQM 2631
FVRMLSRTSAKGGSSGQYIRATLPYIR EIPIIIVFRALGFVADKDILEHICYDFSDTQM
Sbjct: 244 FVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTQM 303
Query: 2630 MELLRPSLEEAFVIQNQQVALDYIGKRGSTVGVTREKRIKYAREILQKEMLPHVGVGEYC 2451
MELLRPSLEEAFVIQNQQVALDYIGKRGSTVGVTREKRIKYA+EILQKEMLPHVGVGEYC
Sbjct: 304 MELLRPSLEEAFVIQNQQVALDYIGKRGSTVGVTREKRIKYAKEILQKEMLPHVGVGEYC 363
Query: 2450 ETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRG 2271
ETKKAYYFGYIIHRLLLCALGRR EDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVR
Sbjct: 364 ETKKAYYFGYIIHRLLLCALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRA 423
Query: 2270 YVQKCVDNGKEVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYAST 2091
YVQKCVDNGK+VNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYAST
Sbjct: 424 YVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYAST 483
Query: 2090 LSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAA 1911
LSHLRRLNSPIGREGKLAKPRQLHNS WGMMCPAETPEGQACGLVKNLALMVYITVGSAA
Sbjct: 484 LSHLRRLNSPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAA 543
Query: 1910 YPILEFLEEWGTENFEEISPAVIPQSTKIFVNGCWVGIHRDPDMLVKTXXXXXXRVDVNT 1731
PILEFLEEW TENFEEISPAVIPQSTKIFVNGCWVGIHR+PD+LVKT +VDVNT
Sbjct: 544 NPILEFLEEWSTENFEEISPAVIPQSTKIFVNGCWVGIHRNPDLLVKTLRQLRRQVDVNT 603
Query: 1730 EVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRETPDEGGWHDLVA 1551
EVGV+RDIRLKELR+YTDYGRCSRPLFIVEKQRLLIKK+DI+ALQ RE+P++GGWHDLV+
Sbjct: 604 EVGVIRDIRLKELRLYTDYGRCSRPLFIVEKQRLLIKKRDIRALQLRESPEDGGWHDLVS 663
Query: 1550 KGFIEYVDXXXXXXTMISMTINDLVSARLNPEEAYSETYTHCEIHPSLILGVCASIIPFP 1371
KGFIEYVD TMISMTINDL+SARLNPEEAYSETYTHCEIHPSLILGVCASIIPFP
Sbjct: 664 KGFIEYVDTEEEETTMISMTINDLISARLNPEEAYSETYTHCEIHPSLILGVCASIIPFP 723
Query: 1370 DHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPA 1191
DHNQSPRNTYQSAMGKQAMGIYVTNYQ RMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPA
Sbjct: 724 DHNQSPRNTYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPA 783
Query: 1190 GINAIVAISCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNR 1011
GINAIVAI+CYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNR
Sbjct: 784 GINAIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNR 843
Query: 1010 NDTMGMRHGSYDKLDDDGLAPPGTRVGGEDVIIGKTTPIAQDEAQGQASRYTKRDHSTSL 831
+TMGMRHGSYDKLDDDGLAPPGTRV GEDVIIGKTTPI+QD++QGQASRYT+RDHSTSL
Sbjct: 844 ENTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPISQDDSQGQASRYTRRDHSTSL 903
Query: 830 RHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPW 651
RHSE+GMVDQVLLTTNADGLRFVKVR+RSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPW
Sbjct: 904 RHSESGMVDQVLLTTNADGLRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPW 963
Query: 650 TVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHK 471
TVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHK
Sbjct: 964 TVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHK 1023
Query: 470 CGYQMRGFETMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEG 291
CGYQMRGFETMYNGHTGRRL+AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEG
Sbjct: 1024 CGYQMRGFETMYNGHTGRRLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEG 1083
Query: 290 RSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFEC 111
RSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFEC
Sbjct: 1084 RSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFEC 1143
Query: 110 RGCKNKTDIVQVHIPYACKLLFQELMSMAIAPRMLT 3
RGCKNKTDIVQVHIPYACKLLFQELM+MAIAPRMLT
Sbjct: 1144 RGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRMLT 1179