BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia25_contig00005245
         (2870 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275898.2| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...  1149   0.0  
ref|XP_007040111.1| DNA-directed RNA polymerase II subunit RPB1-...  1088   0.0  
emb|CBI34757.3| unnamed protein product [Vitis vinifera]             1080   0.0  
ref|XP_006477376.1| PREDICTED: DNA-directed RNA polymerase IV su...  1008   0.0  
ref|XP_006477375.1| PREDICTED: DNA-directed RNA polymerase IV su...  1008   0.0  
ref|XP_004147993.1| PREDICTED: DNA-directed RNA polymerase D sub...  1003   0.0  
ref|XP_006440521.1| hypothetical protein CICLE_v10018489mg [Citr...  1001   0.0  
ref|XP_007210915.1| hypothetical protein PRUPE_ppa000278mg [Prun...   996   0.0  
ref|XP_006573755.1| PREDICTED: DNA-directed RNA polymerase IV su...   960   0.0  
ref|XP_006590533.1| PREDICTED: DNA-directed RNA polymerase IV su...   958   0.0  
ref|XP_006573757.1| PREDICTED: DNA-directed RNA polymerase IV su...   955   0.0  
ref|XP_006573754.1| PREDICTED: DNA-directed RNA polymerase IV su...   955   0.0  
ref|XP_006573756.1| PREDICTED: DNA-directed RNA polymerase IV su...   946   0.0  
ref|XP_004511611.1| PREDICTED: DNA-directed RNA polymerase D sub...   942   0.0  
ref|XP_004511607.1| PREDICTED: DNA-directed RNA polymerase D sub...   938   0.0  
gb|EXC17779.1| DNA-directed RNA polymerase D subunit 1 [Morus no...   938   0.0  
ref|XP_007158453.1| hypothetical protein PHAVU_002G153700g [Phas...   934   0.0  
ref|XP_007158454.1| hypothetical protein PHAVU_002G153700g [Phas...   929   0.0  
ref|XP_004298730.1| PREDICTED: DNA-directed RNA polymerase D sub...   912   0.0  
ref|XP_003611164.1| DNA-directed RNA polymerase subunit beta [Me...   912   0.0  

>ref|XP_002275898.2| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase D subunit
            1-like [Vitis vinifera]
          Length = 1560

 Score = 1149 bits (2972), Expect = 0.0
 Identities = 579/881 (65%), Positives = 687/881 (77%), Gaps = 4/881 (0%)
 Frame = -3

Query: 2859 STWLRETDGNLFCSLVKHNQDLVLDYLYAAQEVLCEWLSMRGLTVXXXXXXXXXXXXSRK 2680
            S WLR+ DGNLF SLVK  Q   LD+LYAAQEVLCEWLSMRGL+V            SRK
Sbjct: 611  SAWLRDIDGNLFSSLVKDCQGKALDFLYAAQEVLCEWLSMRGLSVSLSDIYLSSDSISRK 670

Query: 2679 NMIDEVHCGLLEAEQTCLFKQLLVDSNHDFLVEMGEENQNAMTLEVDQLCYEKQKSAALT 2500
            NMIDEV CGLL AEQTC FKQLLVDS+ +FL+  GE NQN +  +V  L YE+Q SAAL 
Sbjct: 671  NMIDEVFCGLLVAEQTCHFKQLLVDSSQNFLIGSGENNQNGVVPDVQSLWYERQGSAALC 730

Query: 2499 QGSVYAFKQVFRDIQNLTYRYASWNNSLLAMVKAGSKGNLLKLVQQGLCLGLQHSLVPLS 2320
            Q SV AFKQ FRDIQNL Y+YA+ +NSLLAM+KAGSKGNLLKLVQQGLCLGLQHSLVPLS
Sbjct: 731  QSSVCAFKQKFRDIQNLVYQYANKDNSLLAMLKAGSKGNLLKLVQQGLCLGLQHSLVPLS 790

Query: 2319 FSLPRQLSCAAWNNQKASNRSQMTWG--SQSYIPYAVVENSYITGLNPLETFVHSITGRE 2146
            F +P QLSCAAWN QK     Q      ++SYIPYAVVENS++ GLNPLE FVHS+T R+
Sbjct: 791  FKIPHQLSCAAWNKQKVPGLIQNDTSEYAESYIPYAVVENSFLMGLNPLECFVHSVTSRD 850

Query: 2145 SSFSNHAELPGTLTRKLNFFMRDLYITYDGTVRNAYGNQLVQFSYNIEKDTSSSSGMHGF 1966
            SSFS++A+LPGTLTR+L FFMRDLYI YDGTVRNAYGNQLVQFSYNIE  ++ S G+   
Sbjct: 851  SSFSDNADLPGTLTRRLMFFMRDLYIAYDGTVRNAYGNQLVQFSYNIEHTSTPSDGI--- 907

Query: 1965 SGENSYACGA-MGGQSVGSLAACAISEASYSALDQPISLLEISPLLNLKNVLECGLPKST 1789
               N   C   MGGQ VGS++ACAISEA+YSALDQPISLLE SPLLNLK VLECGL KST
Sbjct: 908  ---NEDTCAYDMGGQPVGSISACAISEAAYSALDQPISLLEPSPLLNLKRVLECGLRKST 964

Query: 1788 ADQTMSLFLSEKLGRQRHGFEYGALEVKNHLERLLFSDIVSTVMIIFSPQTCSQTHFSPW 1609
            AD+T+SLFLS+KL +++HGFEYGALEVKNHLE+LLFSDIVSTVMI+FSPQ  S+THFSPW
Sbjct: 965  ADRTVSLFLSKKLEKRKHGFEYGALEVKNHLEKLLFSDIVSTVMIVFSPQNGSKTHFSPW 1024

Query: 1608 VCHFHVCKEIVKRRKLKVHSIIDSLYMKCNMARVESKVNLPTLQITSKECSMDEMQKENN 1429
            VCHFHVC+EI K+R LK HSIID+LYMKCN AR ESK+NLP LQITSK+C +D M+KE++
Sbjct: 1025 VCHFHVCEEIAKKRSLKPHSIIDALYMKCNSARAESKINLPDLQITSKDCFVD-MEKEDS 1083

Query: 1428 DMICITVTFENLKNSCLQWETARDLVIPFFLGTVIKGFSVIKKVDILWNDRRGVQKSTGL 1249
            D  CITV+  N K SC+Q +T RDLVIPF LG V+KG   +KKVDILWND          
Sbjct: 1084 DCFCITVSIVNSKKSCIQLDTVRDLVIPFLLGAVVKGLLDVKKVDILWNDNPDSDVLKSS 1143

Query: 1248 FGELYLKVFMSADCSRTKIWNALVNNCIQIMDMIDWKRSHPDNINTMFAAYGIDIAWTFF 1069
             G LYL+V++S DC +   W  L++ C+QIMDMIDW+RSHPDNI+ +F  YGID  W +F
Sbjct: 1144 SGRLYLRVYVSGDCGKKNFWGVLMDACLQIMDMIDWERSHPDNIHDIFVVYGIDAGWKYF 1203

Query: 1068 VKNLKSAISDIGKTILPEHLLLFANHLSSTGEFVGLNAKGMAHQKEQTSVSSPLMQACFS 889
            + +LKSAISDIGKT+LPEHLLL A+ LS+TGEFVGLNAKGMA QKE TS+SSP MQ CFS
Sbjct: 1204 LNSLKSAISDIGKTVLPEHLLLVASCLSATGEFVGLNAKGMARQKELTSISSPFMQGCFS 1263

Query: 888  NPSACFIKAAKSAVVDNLQGSLDALAWGSTPSLGTAGPFELVYSEKGYELAKPLDVYSLL 709
            +P +CFIKA K AV DNL GSLDALAWG  PS+G+ G F+++YS KG+ELA+P D+Y LL
Sbjct: 1264 SPGSCFIKAGKRAVADNLHGSLDALAWGKIPSVGSGGHFDILYSAKGHELARPEDIYKLL 1323

Query: 708  GSQISSQEQIVEFDIPNSCSRMLDKCGVKPLYTYGDSPLKGRKNYEIFLKAI-RNYISLN 532
            GSQ S  EQ ++  +P +C +   KCG + +Y  GDS  KG K+ E   K++ R+++SLN
Sbjct: 1324 GSQTSCHEQNLKVKVPITCYQTTTKCGAQLVYANGDSASKGCKSLEKISKSVLRSFLSLN 1383

Query: 531  DVQNLSHTWKNILRKYPVNHQLNERDKSTLLVGLERHPRRDEKIGVGVQEIKVGYHPKHP 352
            D+Q LS   K IL+KYP+NHQL+E DK+TL++ L  HPRRDEKIG G Q IKV YH K+ 
Sbjct: 1384 DIQKLSRRLKFILQKYPINHQLSEIDKTTLMMALYFHPRRDEKIGPGAQNIKVRYHSKYH 1443

Query: 351  TSTCFFVVRTDGTIEDFSYHKCVIGWLELIAPRKVKSYESK 229
             + CF +VRTDGT EDFSYHKCV G LE+I PR+ +SY+S+
Sbjct: 1444 NTRCFSLVRTDGTEEDFSYHKCVHGALEIIDPRRARSYQSR 1484


>ref|XP_007040111.1| DNA-directed RNA polymerase II subunit RPB1-B, putative [Theobroma
            cacao] gi|508777356|gb|EOY24612.1| DNA-directed RNA
            polymerase II subunit RPB1-B, putative [Theobroma cacao]
          Length = 1484

 Score = 1088 bits (2814), Expect = 0.0
 Identities = 557/890 (62%), Positives = 679/890 (76%), Gaps = 10/890 (1%)
 Frame = -3

Query: 2868 SRESTWLRETDGNLFCSLVKHNQDLVLDYLYAAQEVLCEWLSMRGLTVXXXXXXXXXXXX 2689
            S  STWLR+ DGNLF SL+KH Q  VLD+LYAAQEVLCEWLSMRGL+V            
Sbjct: 589  SEGSTWLRDADGNLFQSLIKHYQGKVLDFLYAAQEVLCEWLSMRGLSVSLSDLYLSSDSN 648

Query: 2688 SRKNMIDEVHCGLLEAEQTCLFKQLLVDSNHDFLVEMGEENQNAMTLEVDQLCYEKQKSA 2509
            S+KNM+DE+ CGL E EQTC FKQL+VDSNHDFLV   EE  + M L+V+Q+CYEKQ+SA
Sbjct: 649  SQKNMMDEIFCGLQEIEQTCNFKQLMVDSNHDFLVGHDEEVDSFMALDVEQMCYEKQRSA 708

Query: 2508 ALTQGSVYAFKQVFRDIQNLTYRYASWNNSLLAMVKAGSKGNLLKLVQQGLCLGLQHSLV 2329
            AL+Q SV +FKQVFRDIQNL Y+YA+ +NSLL M KAGSKGNLLKLVQ  LCLGLQHSLV
Sbjct: 709  ALSQASVDSFKQVFRDIQNLLYKYANKDNSLLTMFKAGSKGNLLKLVQHSLCLGLQHSLV 768

Query: 2328 PLSFSLPRQLSCAAWNNQKASNRSQ----MTWGSQSYIPYAVVENSYITGLNPLETFVHS 2161
            PLSF  P QLSCAAWNNQK+   +Q        +++YIPYAVVE+S++TGLNPLE+FVHS
Sbjct: 769  PLSFRFPHQLSCAAWNNQKSHGLTQKVDDTAESAKNYIPYAVVESSFMTGLNPLESFVHS 828

Query: 2160 ITGRESSFSNHAELPGTLTRKLNFFMRDLYITYDGTVRNAYGNQLVQFSYNIEKDTSS-S 1984
            +T R+SSFS++A+LPGTL+R+L FFMRDLY  YDGTVRN+YG+ +VQF Y+I+KD SS +
Sbjct: 829  VTSRDSSFSDNADLPGTLSRRLMFFMRDLYTAYDGTVRNSYGDLVVQFCYDIDKDASSPT 888

Query: 1983 SGMHGFSGENSYACGAMGGQSVGSLAACAISEASYSALDQPISLLEISPLLNLKNVLECG 1804
            S  HG   E+S     +GGQ VGSL+ACAISEA+YSALDQP+SLLE SPLLNLK V+ECG
Sbjct: 889  SCAHGLISESSTIPEGIGGQPVGSLSACAISEAAYSALDQPVSLLETSPLLNLKRVVECG 948

Query: 1803 LPKSTADQTMSLFLSEKLGRQRHGFEYGALEVKNHLERLLFSDIVSTVMIIFSPQTCSQT 1624
              +S ADQTM+LFLS KLGR+RHG EY ALEVKNHLERL FSDIV+TV IIFSPQ   + 
Sbjct: 949  SKRSNADQTMTLFLSNKLGRKRHGSEYAALEVKNHLERLTFSDIVTTVSIIFSPQMYREN 1008

Query: 1623 HFSPWVCHFHVCKEIVKRRKLKVHSIIDSLYMKCNMARVESKVNLPTLQITS--KECSMD 1450
            HF+PWVCHFHVCK+ +KRR+LKV SIIDSL+M C  A+   K++LP +QITS  + CS  
Sbjct: 1009 HFTPWVCHFHVCKDTMKRRQLKVQSIIDSLHMHCTTAKTMWKISLPDMQITSNGRACSHI 1068

Query: 1449 EMQKENNDMICITVTF-ENLKNSCLQWETARDLVIPFFLGTVIKGFSVIKKVDILWNDRR 1273
            +M  E +D  CITVT  E  K+S ++ +  RD+VIP+ L  VIKGF  IKKVDILW DR 
Sbjct: 1069 DMPNE-DDTFCITVTIVEYSKSSHMELDVIRDMVIPYLLEAVIKGFPEIKKVDILWKDRL 1127

Query: 1272 GVQK-STGLFGELYLKVFMSADCSRTKIWNALVNNCIQIMDMIDWKRSHPDNINTMFAAY 1096
             V K      GELYL+VF+S D   TK+W  L+N+C+QIMDMIDW RSHPDNIN +  AY
Sbjct: 1128 KVSKPHKSSCGELYLRVFVSGDFGITKLWGVLMNDCLQIMDMIDWTRSHPDNINQLCLAY 1187

Query: 1095 GIDIAWTFFVKNLKSAISDIGKTILPEHLLLFANHLSSTGEFVGLNAKGMAHQKEQTSVS 916
            GID  W FF+ NLKSAISD GKTIL EHLL+ AN LS+TGEFVGLN+KG+  Q+E   VS
Sbjct: 1188 GIDAGWKFFLNNLKSAISDTGKTILNEHLLVVANCLSATGEFVGLNSKGLRQQREHAYVS 1247

Query: 915  SPLMQACFSNPSACFIKAAKSAVVDNLQGSLDALAWGSTPSLGTAGPFELVYSEKGYELA 736
            SP MQACFSNPSA F+KAAK+   D+LQG++DALAWG  P +GT G F+++YS K   LA
Sbjct: 1248 SPFMQACFSNPSASFVKAAKTGASDDLQGTIDALAWGRIPHIGTGGQFDIIYSVKDQRLA 1307

Query: 735  KPLDVYSLLGSQISSQEQIVEFDIPNSCSRMLDKCGVKPLYTYGDSPLKGRKNYEIFLKA 556
            +P+DVY LLGS ISSQ+Q VEF++P + +   +K G   +   GDS  +  K  E   ++
Sbjct: 1308 EPVDVYKLLGSSISSQKQDVEFEVPKALNFKSEKYGSLLIDALGDSASEELKKIETKRRS 1367

Query: 555  I-RNYISLNDVQNLSHTWKNILRKYPVNHQLNERDKSTLLVGLERHPRRDEKIGVGVQEI 379
            I R  ++L+D+Q LS   +NIL KYP++H+L+E D +TL++ L  HPRRDEKIG G QEI
Sbjct: 1368 IWRELLTLDDIQRLSRALRNILHKYPIDHRLSEADWNTLMMALYFHPRRDEKIGSGAQEI 1427

Query: 378  KVGYHPKHPTSTCFFVVRTDGTIEDFSYHKCVIGWLELIAPRKVKSYESK 229
            KVGYHP+H  + CF +VRTDGTI DFSYHKCV+G LE+IAP + KSY+SK
Sbjct: 1428 KVGYHPEHANARCFSLVRTDGTIVDFSYHKCVLGALEIIAPHRAKSYKSK 1477


>emb|CBI34757.3| unnamed protein product [Vitis vinifera]
          Length = 1359

 Score = 1080 bits (2792), Expect = 0.0
 Identities = 550/846 (65%), Positives = 658/846 (77%), Gaps = 4/846 (0%)
 Frame = -3

Query: 2754 EWLSMRGLTVXXXXXXXXXXXXSRKNMIDEVHCGLLEAEQTCLFKQLLVDSNHDFLVEMG 2575
            +WLSMRGL+V            SRKNMIDEV CGLL AEQTC FKQLLVDS+ +FL+  G
Sbjct: 515  QWLSMRGLSVSLSDIYLSSDSISRKNMIDEVFCGLLVAEQTCHFKQLLVDSSQNFLIGSG 574

Query: 2574 EENQNAMTLEVDQLCYEKQKSAALTQGSVYAFKQVFRDIQNLTYRYASWNNSLLAMVKAG 2395
            E NQN +  +V  L YE+Q SAAL Q SV AFKQ FRDIQNL Y+YA+ +NSLLAM+KAG
Sbjct: 575  ENNQNGVVPDVQSLWYERQGSAALCQSSVCAFKQKFRDIQNLVYQYANKDNSLLAMLKAG 634

Query: 2394 SKGNLLKLVQQGLCLGLQHSLVPLSFSLPRQLSCAAWNNQKASNRSQMTWG--SQSYIPY 2221
            SKGNLLKLVQQGLCLGLQHSLVPLSF +P QLSCAAWN QK     Q      ++SYIPY
Sbjct: 635  SKGNLLKLVQQGLCLGLQHSLVPLSFKIPHQLSCAAWNKQKVPGLIQNDTSEYAESYIPY 694

Query: 2220 AVVENSYITGLNPLETFVHSITGRESSFSNHAELPGTLTRKLNFFMRDLYITYDGTVRNA 2041
            AVVENS++ GLNPLE FVHS+T R+SSFS++A+LPGTLTR+L FFMRDLYI YDGTVRNA
Sbjct: 695  AVVENSFLMGLNPLECFVHSVTSRDSSFSDNADLPGTLTRRLMFFMRDLYIAYDGTVRNA 754

Query: 2040 YGNQLVQFSYNIEKDTSSSSGMHGFSGENSYACGA-MGGQSVGSLAACAISEASYSALDQ 1864
            YGNQLVQFSYNIE  ++ S G+      N   C   MGGQ VGS++ACAISEA+YSALDQ
Sbjct: 755  YGNQLVQFSYNIEHTSTPSDGI------NEDTCAYDMGGQPVGSISACAISEAAYSALDQ 808

Query: 1863 PISLLEISPLLNLKNVLECGLPKSTADQTMSLFLSEKLGRQRHGFEYGALEVKNHLERLL 1684
            PISLLE SPLLNLK VLECGL KSTAD+T+SLFLS+KL +++HGFEYGALEVKNHLE+LL
Sbjct: 809  PISLLEPSPLLNLKRVLECGLRKSTADRTVSLFLSKKLEKRKHGFEYGALEVKNHLEKLL 868

Query: 1683 FSDIVSTVMIIFSPQTCSQTHFSPWVCHFHVCKEIVKRRKLKVHSIIDSLYMKCNMARVE 1504
            FSDIVSTVMI+FSPQ  S+THFSPWVCHFHVC+EI K+R LK HSIID+LYMKCN AR E
Sbjct: 869  FSDIVSTVMIVFSPQNGSKTHFSPWVCHFHVCEEIAKKRSLKPHSIIDALYMKCNSARAE 928

Query: 1503 SKVNLPTLQITSKECSMDEMQKENNDMICITVTFENLKNSCLQWETARDLVIPFFLGTVI 1324
            SK+NLP LQITSK+C +D M+KE++D  CITV+  N K SC+Q +T RDLVIPF LG V+
Sbjct: 929  SKINLPDLQITSKDCFVD-MEKEDSDCFCITVSIVNSKKSCIQLDTVRDLVIPFLLGAVV 987

Query: 1323 KGFSVIKKVDILWNDRRGVQKSTGLFGELYLKVFMSADCSRTKIWNALVNNCIQIMDMID 1144
            KG   IK  D+L        KS+   G LYL+V++S DC +   W  L++ C+QIMDMID
Sbjct: 988  KG-CCIKNSDVL--------KSSS--GRLYLRVYVSGDCGKKNFWGVLMDACLQIMDMID 1036

Query: 1143 WKRSHPDNINTMFAAYGIDIAWTFFVKNLKSAISDIGKTILPEHLLLFANHLSSTGEFVG 964
            W+RSHPDNI+ +F  YGID  W +F+ +LKSAISDIGKT+LPEHLLL A+ LS+TGEFVG
Sbjct: 1037 WERSHPDNIHDIFVVYGIDAGWKYFLNSLKSAISDIGKTVLPEHLLLVASCLSATGEFVG 1096

Query: 963  LNAKGMAHQKEQTSVSSPLMQACFSNPSACFIKAAKSAVVDNLQGSLDALAWGSTPSLGT 784
            LNAKGMA QKE TS+SSP MQ CFS+P +CFIKA K AV DNL GSLDALAWG  PS+G+
Sbjct: 1097 LNAKGMARQKELTSISSPFMQGCFSSPGSCFIKAGKRAVADNLHGSLDALAWGKIPSVGS 1156

Query: 783  AGPFELVYSEKGYELAKPLDVYSLLGSQISSQEQIVEFDIPNSCSRMLDKCGVKPLYTYG 604
             G F+++YS KG+ELA+P D+Y LLGSQ S  EQ ++  +P +C +   KCG + +Y  G
Sbjct: 1157 GGHFDILYSAKGHELARPEDIYKLLGSQTSCHEQNLKVKVPITCYQTTTKCGAQLVYANG 1216

Query: 603  DSPLKGRKNYEIFLKAI-RNYISLNDVQNLSHTWKNILRKYPVNHQLNERDKSTLLVGLE 427
            DS  KG K+ E   K++ R+++SLND+Q LS   K IL+KYP+NHQL+E DK+TL++ L 
Sbjct: 1217 DSASKGCKSLEKISKSVLRSFLSLNDIQKLSRRLKFILQKYPINHQLSEIDKTTLMMALY 1276

Query: 426  RHPRRDEKIGVGVQEIKVGYHPKHPTSTCFFVVRTDGTIEDFSYHKCVIGWLELIAPRKV 247
             HPRRDEKIG G Q IKV YH K+  + CF +VRTDGT EDFSYHKCV G LE+I PR+ 
Sbjct: 1277 FHPRRDEKIGPGAQNIKVRYHSKYHNTRCFSLVRTDGTEEDFSYHKCVHGALEIIDPRRA 1336

Query: 246  KSYESK 229
            +SY+S+
Sbjct: 1337 RSYQSR 1342


>ref|XP_006477376.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X2
            [Citrus sinensis] gi|568847098|ref|XP_006477377.1|
            PREDICTED: DNA-directed RNA polymerase IV subunit 1-like
            isoform X3 [Citrus sinensis]
            gi|568847100|ref|XP_006477378.1| PREDICTED: DNA-directed
            RNA polymerase IV subunit 1-like isoform X4 [Citrus
            sinensis]
          Length = 1443

 Score = 1008 bits (2606), Expect = 0.0
 Identities = 524/886 (59%), Positives = 654/886 (73%), Gaps = 5/886 (0%)
 Frame = -3

Query: 2859 STWLRETDGNLFCSLVKHNQDLVLDYLYAAQEVLCEWLSMRGLTVXXXXXXXXXXXXSRK 2680
            S+WLR+ +GNLF  L+K  QD VLD+LYAAQEVLCEWLS+RG+TV            SRK
Sbjct: 578  SSWLRDYEGNLFQYLIKRYQDKVLDFLYAAQEVLCEWLSVRGMTVSLSDLYLASHSCSRK 637

Query: 2679 NMIDEVHCGLLEAEQTCLFKQLLVDSNHDFLVEMGEENQNAMTLEVDQLCYEKQKSAALT 2500
             ++DE+  GL EA+ TC F+QL+VDS+ +FL+   E++++  +L+ + L YEKQ+SAAL+
Sbjct: 638  ILMDEIFYGLREAQDTCNFQQLMVDSHMNFLMS-AEDSESTRSLQGEHLSYEKQRSAALS 696

Query: 2499 QGSVYAFKQVFRDIQNLTYRYASWNNSLLAMVKAGSKGNLLKLVQQGLCLGLQHSLVPLS 2320
            Q SV AFK VF DIQNL Y+Y S +NSLLAM KAGSKGNLLKLVQ  LCLGLQHSL PLS
Sbjct: 697  QASVDAFKHVFWDIQNLAYKYGSKDNSLLAMFKAGSKGNLLKLVQHSLCLGLQHSLAPLS 756

Query: 2319 FSLPRQLSCAAWNNQKASNRSQMTWGSQSYIPYAVVENSYITGLNPLETFVHSITGRESS 2140
            F  P +LSCAAWN  +A + ++    ++SYIP AVV NS++TGLNPLE F+HS+T R+SS
Sbjct: 757  FRFPHELSCAAWNRLRAGDNTEC---AKSYIPSAVVANSFLTGLNPLECFIHSVTSRDSS 813

Query: 2139 FSNHAELPGTLTRKLNFFMRDLYITYDGTVRNAYGNQLVQFSYNIEKDTSSSSGMHGFSG 1960
            FS++A+LPGTLTR+L FFMRDL   YDGTVRNAYGNQ+VQFSYNIE  ++ +        
Sbjct: 814  FSDNADLPGTLTRRLMFFMRDLCTAYDGTVRNAYGNQIVQFSYNIEGTSTPT-------- 865

Query: 1959 ENSYACGAMGGQSVGSLAACAISEASYSALDQPISLLEISPLLNLKNVLECGLPKSTADQ 1780
                  G +GGQSVGSL+ACAISEA+YSALDQPISLLE SPLLNLKNVLECG  KS ADQ
Sbjct: 866  ------GEIGGQSVGSLSACAISEAAYSALDQPISLLETSPLLNLKNVLECGSKKSNADQ 919

Query: 1779 TMSLFLSEKLGRQRHGFEYGALEVKNHLERLLFSDIVSTVMIIFSPQTCSQTHFSPWVCH 1600
            TMSLFLS KLG++RHGFEYGALEVKNHLE L+ SDIVST MII+SPQT S  HFSPW+CH
Sbjct: 920  TMSLFLSNKLGKRRHGFEYGALEVKNHLECLMLSDIVSTSMIIYSPQTGSMKHFSPWICH 979

Query: 1599 FHVCKEIVKRRKLKVHSIIDSLYMKCNMARVESKVNLPTLQITSKECSMDEMQKENNDMI 1420
            FHV KEI+KR  LK HSIIDSLY +C  AR E K+++P + I++K+CS   MQKE ND  
Sbjct: 980  FHVRKEIMKRTGLKEHSIIDSLYRQCKAARTELKISVPDMLISNKDCSSINMQKECNDAF 1039

Query: 1419 CITVTF-ENLKNSCLQWETARDLVIPFFLGTVIKGFSVIKKVDILWNDRRGVQKS-TGLF 1246
            C+TV   EN K + +  ET +  V+PF L TV+KGF  IKKVDILW D++   KS    F
Sbjct: 1040 CVTVMIVENFKRTSIDLETIQMWVMPFLLKTVVKGFREIKKVDILWKDKQKASKSHDDSF 1099

Query: 1245 GELYLKVFMSADCSRTKIWNALVNNCIQIMDMIDWKRSHPDNINTMFAAYGIDIAWTFFV 1066
            GELYL+V MS  C  T +W+AL+N+C QIMDMIDW RSHPDNI +   AYGID    FF+
Sbjct: 1100 GELYLRVSMSGQCHITSLWSALMNDCHQIMDMIDWTRSHPDNIRSFCLAYGIDAGLQFFL 1159

Query: 1065 KNLKSAISDIGKTILPEHLLLFANHLSSTGEFVGLNAKGMAHQKEQTSVSSPLMQACFSN 886
             NL+SAISD GK ILPEHLL+ AN LS+TGEFVGLNAKG+A Q++ +SVSSP +QA FSN
Sbjct: 1160 TNLESAISDTGKNILPEHLLIVANTLSATGEFVGLNAKGLALQRKHSSVSSPFVQAFFSN 1219

Query: 885  PSACFIKAAKSAVVDNLQGSLDALAWGSTPSLGTAGPFELVYSEKGYELAKPLDVYSLLG 706
            P A FIKAAK+  VDNLQGS+DAL WG  PS+GT G F+++YS +G  L+KP+DVY+LL 
Sbjct: 1220 PGASFIKAAKAGAVDNLQGSVDALGWGKVPSVGTGGHFDIIYSGEGRTLSKPVDVYNLLS 1279

Query: 705  SQISSQEQIVEFDIPNSCSRMLDKCGVKPLYTYGDSPLKGRKNYE---IFLKAIRNYISL 535
            + +SS +Q  +  +  +   + DKCG K    +GD   KG  N +   I    +R   + 
Sbjct: 1280 TPVSS-KQNEKLKVCKAQGLISDKCGAK----FGDFAFKGLGNLDFETISRGVLRKSWTY 1334

Query: 534  NDVQNLSHTWKNILRKYPVNHQLNERDKSTLLVGLERHPRRDEKIGVGVQEIKVGYHPKH 355
            NDV  LS+  K IL KY +  +L+E+DK+T++  L  HPRR+EK+G+   +I+V YHP+H
Sbjct: 1335 NDVLRLSNALKKILHKYSIGQRLSEKDKTTVIRALYFHPRRNEKLGIEPPDIEVTYHPEH 1394

Query: 354  PTSTCFFVVRTDGTIEDFSYHKCVIGWLELIAPRKVKSYESKLQKM 217
              S CF +VR DG+IEDFSYHKCVIG LE+IAP K + Y +K +++
Sbjct: 1395 QNSRCFSLVREDGSIEDFSYHKCVIGALEIIAPEKAEIYRAKWKRL 1440


>ref|XP_006477375.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X1
            [Citrus sinensis]
          Length = 1481

 Score = 1008 bits (2606), Expect = 0.0
 Identities = 524/886 (59%), Positives = 654/886 (73%), Gaps = 5/886 (0%)
 Frame = -3

Query: 2859 STWLRETDGNLFCSLVKHNQDLVLDYLYAAQEVLCEWLSMRGLTVXXXXXXXXXXXXSRK 2680
            S+WLR+ +GNLF  L+K  QD VLD+LYAAQEVLCEWLS+RG+TV            SRK
Sbjct: 616  SSWLRDYEGNLFQYLIKRYQDKVLDFLYAAQEVLCEWLSVRGMTVSLSDLYLASHSCSRK 675

Query: 2679 NMIDEVHCGLLEAEQTCLFKQLLVDSNHDFLVEMGEENQNAMTLEVDQLCYEKQKSAALT 2500
             ++DE+  GL EA+ TC F+QL+VDS+ +FL+   E++++  +L+ + L YEKQ+SAAL+
Sbjct: 676  ILMDEIFYGLREAQDTCNFQQLMVDSHMNFLMS-AEDSESTRSLQGEHLSYEKQRSAALS 734

Query: 2499 QGSVYAFKQVFRDIQNLTYRYASWNNSLLAMVKAGSKGNLLKLVQQGLCLGLQHSLVPLS 2320
            Q SV AFK VF DIQNL Y+Y S +NSLLAM KAGSKGNLLKLVQ  LCLGLQHSL PLS
Sbjct: 735  QASVDAFKHVFWDIQNLAYKYGSKDNSLLAMFKAGSKGNLLKLVQHSLCLGLQHSLAPLS 794

Query: 2319 FSLPRQLSCAAWNNQKASNRSQMTWGSQSYIPYAVVENSYITGLNPLETFVHSITGRESS 2140
            F  P +LSCAAWN  +A + ++    ++SYIP AVV NS++TGLNPLE F+HS+T R+SS
Sbjct: 795  FRFPHELSCAAWNRLRAGDNTEC---AKSYIPSAVVANSFLTGLNPLECFIHSVTSRDSS 851

Query: 2139 FSNHAELPGTLTRKLNFFMRDLYITYDGTVRNAYGNQLVQFSYNIEKDTSSSSGMHGFSG 1960
            FS++A+LPGTLTR+L FFMRDL   YDGTVRNAYGNQ+VQFSYNIE  ++ +        
Sbjct: 852  FSDNADLPGTLTRRLMFFMRDLCTAYDGTVRNAYGNQIVQFSYNIEGTSTPT-------- 903

Query: 1959 ENSYACGAMGGQSVGSLAACAISEASYSALDQPISLLEISPLLNLKNVLECGLPKSTADQ 1780
                  G +GGQSVGSL+ACAISEA+YSALDQPISLLE SPLLNLKNVLECG  KS ADQ
Sbjct: 904  ------GEIGGQSVGSLSACAISEAAYSALDQPISLLETSPLLNLKNVLECGSKKSNADQ 957

Query: 1779 TMSLFLSEKLGRQRHGFEYGALEVKNHLERLLFSDIVSTVMIIFSPQTCSQTHFSPWVCH 1600
            TMSLFLS KLG++RHGFEYGALEVKNHLE L+ SDIVST MII+SPQT S  HFSPW+CH
Sbjct: 958  TMSLFLSNKLGKRRHGFEYGALEVKNHLECLMLSDIVSTSMIIYSPQTGSMKHFSPWICH 1017

Query: 1599 FHVCKEIVKRRKLKVHSIIDSLYMKCNMARVESKVNLPTLQITSKECSMDEMQKENNDMI 1420
            FHV KEI+KR  LK HSIIDSLY +C  AR E K+++P + I++K+CS   MQKE ND  
Sbjct: 1018 FHVRKEIMKRTGLKEHSIIDSLYRQCKAARTELKISVPDMLISNKDCSSINMQKECNDAF 1077

Query: 1419 CITVTF-ENLKNSCLQWETARDLVIPFFLGTVIKGFSVIKKVDILWNDRRGVQKS-TGLF 1246
            C+TV   EN K + +  ET +  V+PF L TV+KGF  IKKVDILW D++   KS    F
Sbjct: 1078 CVTVMIVENFKRTSIDLETIQMWVMPFLLKTVVKGFREIKKVDILWKDKQKASKSHDDSF 1137

Query: 1245 GELYLKVFMSADCSRTKIWNALVNNCIQIMDMIDWKRSHPDNINTMFAAYGIDIAWTFFV 1066
            GELYL+V MS  C  T +W+AL+N+C QIMDMIDW RSHPDNI +   AYGID    FF+
Sbjct: 1138 GELYLRVSMSGQCHITSLWSALMNDCHQIMDMIDWTRSHPDNIRSFCLAYGIDAGLQFFL 1197

Query: 1065 KNLKSAISDIGKTILPEHLLLFANHLSSTGEFVGLNAKGMAHQKEQTSVSSPLMQACFSN 886
             NL+SAISD GK ILPEHLL+ AN LS+TGEFVGLNAKG+A Q++ +SVSSP +QA FSN
Sbjct: 1198 TNLESAISDTGKNILPEHLLIVANTLSATGEFVGLNAKGLALQRKHSSVSSPFVQAFFSN 1257

Query: 885  PSACFIKAAKSAVVDNLQGSLDALAWGSTPSLGTAGPFELVYSEKGYELAKPLDVYSLLG 706
            P A FIKAAK+  VDNLQGS+DAL WG  PS+GT G F+++YS +G  L+KP+DVY+LL 
Sbjct: 1258 PGASFIKAAKAGAVDNLQGSVDALGWGKVPSVGTGGHFDIIYSGEGRTLSKPVDVYNLLS 1317

Query: 705  SQISSQEQIVEFDIPNSCSRMLDKCGVKPLYTYGDSPLKGRKNYE---IFLKAIRNYISL 535
            + +SS +Q  +  +  +   + DKCG K    +GD   KG  N +   I    +R   + 
Sbjct: 1318 TPVSS-KQNEKLKVCKAQGLISDKCGAK----FGDFAFKGLGNLDFETISRGVLRKSWTY 1372

Query: 534  NDVQNLSHTWKNILRKYPVNHQLNERDKSTLLVGLERHPRRDEKIGVGVQEIKVGYHPKH 355
            NDV  LS+  K IL KY +  +L+E+DK+T++  L  HPRR+EK+G+   +I+V YHP+H
Sbjct: 1373 NDVLRLSNALKKILHKYSIGQRLSEKDKTTVIRALYFHPRRNEKLGIEPPDIEVTYHPEH 1432

Query: 354  PTSTCFFVVRTDGTIEDFSYHKCVIGWLELIAPRKVKSYESKLQKM 217
              S CF +VR DG+IEDFSYHKCVIG LE+IAP K + Y +K +++
Sbjct: 1433 QNSRCFSLVREDGSIEDFSYHKCVIGALEIIAPEKAEIYRAKWKRL 1478


>ref|XP_004147993.1| PREDICTED: DNA-directed RNA polymerase D subunit 1-like [Cucumis
            sativus] gi|449494342|ref|XP_004159519.1| PREDICTED: LOW
            QUALITY PROTEIN: DNA-directed RNA polymerase D subunit
            1-like [Cucumis sativus]
          Length = 1469

 Score = 1003 bits (2594), Expect = 0.0
 Identities = 507/885 (57%), Positives = 653/885 (73%), Gaps = 5/885 (0%)
 Frame = -3

Query: 2868 SRESTWLRETDGNLFCSLVKHNQDLVLDYLYAAQEVLCEWLSMRGLTVXXXXXXXXXXXX 2689
            S  S WLR++  NLF +L++H +   LDYL  AQ VLCEWLS RGL+V            
Sbjct: 586  SEGSYWLRDSGRNLFQALIEHCEGKTLDYLRDAQGVLCEWLSTRGLSVSLSDLYLSVDSY 645

Query: 2688 SRKNMIDEVHCGLLEAEQTCLFKQLLVDSNHDFLVEMGEENQNAMTLEVDQLCYEKQKSA 2509
            S +NM+D++ CGL EAE+TC  KQL+VDS+ + L+   E+NQ+ +++ V++L YEKQKSA
Sbjct: 646  SHENMMDDIFCGLQEAEETCNLKQLMVDSHKEILIGNDEDNQHLLSIAVERLIYEKQKSA 705

Query: 2508 ALTQGSVYAFKQVFRDIQNLTYRYASWNNSLLAMVKAGSKGNLLKLVQQGLCLGLQHSLV 2329
            AL Q SV AFK+VFRDIQNL Y+Y+  +NSLL M KAGSKGNL+KLVQ  +CLGLQHSLV
Sbjct: 706  ALNQASVDAFKKVFRDIQNLVYKYSGKDNSLLTMFKAGSKGNLMKLVQHSMCLGLQHSLV 765

Query: 2328 PLSFSLPRQLSCAAWNNQKASNRSQ---MTWGSQSYIPYAVVENSYITGLNPLETFVHSI 2158
             LSFSLP +LSCAAWN+QK     Q   +   +QS+IPYAVVENS+++GLNP E F HS+
Sbjct: 766  TLSFSLPHKLSCAAWNSQKMPRYIQKDGLPDRTQSFIPYAVVENSFLSGLNPFECFAHSV 825

Query: 2157 TGRESSFSNHAELPGTLTRKLNFFMRDLYITYDGTVRNAYGNQLVQFSYNIEKDTSSSSG 1978
            T R+SSFS++AE+PGTLTRKL F MRD+Y  YDGTVRNAYGNQLVQF Y+I++ TS S  
Sbjct: 826  TNRDSSFSDNAEVPGTLTRKLTFLMRDIYTAYDGTVRNAYGNQLVQFCYDIDRPTSESES 885

Query: 1977 MHGFSGENSYACGAMGGQSVGSLAACAISEASYSALDQPISLLEISPLLNLKNVLECGLP 1798
                  EN+     +GG  VGSLAACAISEA+YSALDQPISLLE SPLLNLK VLECG  
Sbjct: 886  ------ENNNRDRGIGGHPVGSLAACAISEAAYSALDQPISLLEASPLLNLKRVLECGSK 939

Query: 1797 KSTADQTMSLFLSEKLGRQRHGFEYGALEVKNHLERLLFSDIVSTVMIIFSPQTCSQTHF 1618
            +++  QT SLFLSEKL ++ +GFEYGAL VKNHLER++F DIVS+VMIIFSP    + HF
Sbjct: 940  RNSTKQTFSLFLSEKLSKRSYGFEYGALGVKNHLERVMFKDIVSSVMIIFSPLPSRKKHF 999

Query: 1617 SPWVCHFHVCKEIVKRRKLKVHSIIDSLYMKCNMARVESKVNLPTLQITSKECSMDEMQK 1438
            SPWVCHFHVCKEI+K+R+LK++S+I SL M+C+  R E ++NLP+LQI +++C + +   
Sbjct: 1000 SPWVCHFHVCKEILKKRRLKMNSVIHSLNMRCDSMRQEGRMNLPSLQIITQDCPLADSLT 1059

Query: 1437 ENNDMICITVTF-ENLKNSCLQWETARDLVIPFFLGTVIKGFSVIKKVDILWNDRRGVQK 1261
            E+ D +C+TVT  EN KNS LQ +  +DL+I F LGTVI+GF+ I +VDI WNDR  V K
Sbjct: 1060 EDGDTVCLTVTIAENTKNSFLQLDFIQDLLIHFLLGTVIRGFTEIDRVDITWNDRPKVPK 1119

Query: 1260 STGLFGELYLKVFMSADCSRTKIWNALVNNCIQIMDMIDWKRSHPDNINTMFAAYGIDIA 1081
                 GELYL+V MS +   ++ W  L+NNC+ IMD+IDW RSHPDN +++  AYGID  
Sbjct: 1120 PRCSHGELYLRVTMSGE-GNSRFWATLMNNCLPIMDLIDWTRSHPDNTHSLCLAYGIDSG 1178

Query: 1080 WTFFVKNLKSAISDIGKTILPEHLLLFANHLSSTGEFVGLNAKGMAHQKEQTSVSSPLMQ 901
            W +F+ +L+SA  D+GKTI  EHLLL +N LS+TGEFVGLN KG+ HQ+E   V +P MQ
Sbjct: 1179 WKYFLNSLESATLDVGKTIRLEHLLLVSNSLSATGEFVGLNVKGLTHQREHALVKTPFMQ 1238

Query: 900  ACFSNPSACFIKAAKSAVVDNLQGSLDALAWGSTPSLGTAGPFELVYSEKGYELAKPLDV 721
            ACFS+P AC IKAAK+ + DNL GSLDALAWG  PSLGT G F+++YS KG+EL KP+DV
Sbjct: 1239 ACFSSPGACMIKAAKAGIKDNLSGSLDALAWGRMPSLGTGGQFDILYSGKGHELNKPVDV 1298

Query: 720  YSLLGSQISSQEQIVEFDIPNSCSRMLDKCGVKPLYTYGDSPLKGRKNYEIFLKAI-RNY 544
            Y+LLG Q + ++Q  + +  +  + + +K   + +   G S +KG K  +   K+I R +
Sbjct: 1299 YNLLGGQSTCEKQNTKIESLDK-NTISEKYSAQLMLKNGGSTIKGLKRLDSVSKSILRKF 1357

Query: 543  ISLNDVQNLSHTWKNILRKYPVNHQLNERDKSTLLVGLERHPRRDEKIGVGVQEIKVGYH 364
            ++LND+Q LS   + IL KY +N +LNE DKSTL++ L  HP RDEKIGVG Q+IKVG H
Sbjct: 1358 LTLNDIQKLSFALRTILHKYSLNERLNEVDKSTLMMALYFHPHRDEKIGVGAQDIKVGSH 1417

Query: 363  PKHPTSTCFFVVRTDGTIEDFSYHKCVIGWLELIAPRKVKSYESK 229
             K+  + CF ++R+DGT EDFSYHKCV+G LE+IAP +VK Y+SK
Sbjct: 1418 SKYQNTRCFVLIRSDGTTEDFSYHKCVLGALEIIAPHRVKGYQSK 1462


>ref|XP_006440521.1| hypothetical protein CICLE_v10018489mg [Citrus clementina]
            gi|557542783|gb|ESR53761.1| hypothetical protein
            CICLE_v10018489mg [Citrus clementina]
          Length = 1443

 Score = 1001 bits (2588), Expect = 0.0
 Identities = 520/886 (58%), Positives = 652/886 (73%), Gaps = 5/886 (0%)
 Frame = -3

Query: 2859 STWLRETDGNLFCSLVKHNQDLVLDYLYAAQEVLCEWLSMRGLTVXXXXXXXXXXXXSRK 2680
            S+WLR+ +GNLF  L+K  +D VLD+LYAAQEVLCEWLS+RG+TV            SRK
Sbjct: 578  SSWLRDYEGNLFQYLIKRYRDKVLDFLYAAQEVLCEWLSVRGMTVSLSDLYLASHSCSRK 637

Query: 2679 NMIDEVHCGLLEAEQTCLFKQLLVDSNHDFLVEMGEENQNAMTLEVDQLCYEKQKSAALT 2500
             ++DE+  GL EA+ TC F+QL+VDS+ +FL+   +++++  +L+ + L YEKQ+SAAL+
Sbjct: 638  ILMDEIFYGLREAQDTCNFQQLMVDSHMNFLMS-AKDSESTRSLQGEHLSYEKQRSAALS 696

Query: 2499 QGSVYAFKQVFRDIQNLTYRYASWNNSLLAMVKAGSKGNLLKLVQQGLCLGLQHSLVPLS 2320
            Q SV AFK VF DIQNL Y+Y S +NSLL M KAGSKGNLLKLVQ  LCLGLQHSL PLS
Sbjct: 697  QASVDAFKHVFWDIQNLAYKYGSKDNSLLGMFKAGSKGNLLKLVQHSLCLGLQHSLAPLS 756

Query: 2319 FSLPRQLSCAAWNNQKASNRSQMTWGSQSYIPYAVVENSYITGLNPLETFVHSITGRESS 2140
            F  P +LSCAAWN  +A + ++    ++SYIP AVVENS++TGLNPLE F+HS+T R+SS
Sbjct: 757  FRFPHELSCAAWNRLRAGDNTEC---AKSYIPSAVVENSFLTGLNPLECFIHSVTSRDSS 813

Query: 2139 FSNHAELPGTLTRKLNFFMRDLYITYDGTVRNAYGNQLVQFSYNIEKDTSSSSGMHGFSG 1960
            FS++A+LPGTLTR+L FFMRDL   YDGTVRNAYGNQ+VQFSYNIE  ++ +        
Sbjct: 814  FSDNADLPGTLTRRLMFFMRDLCTAYDGTVRNAYGNQIVQFSYNIEGTSTPT-------- 865

Query: 1959 ENSYACGAMGGQSVGSLAACAISEASYSALDQPISLLEISPLLNLKNVLECGLPKSTADQ 1780
                  G +G Q VGSL+ACAISEA+YSALDQPISLLE SPLLNLKNVLECG  KS ADQ
Sbjct: 866  ------GEIGDQPVGSLSACAISEAAYSALDQPISLLETSPLLNLKNVLECGSKKSNADQ 919

Query: 1779 TMSLFLSEKLGRQRHGFEYGALEVKNHLERLLFSDIVSTVMIIFSPQTCSQTHFSPWVCH 1600
            TMSLFLS KLG++RHGFEYGALEVKNHLE L+ SDIVST MII+SPQT S  HFSPW+CH
Sbjct: 920  TMSLFLSNKLGKRRHGFEYGALEVKNHLECLMLSDIVSTSMIIYSPQTGSMKHFSPWICH 979

Query: 1599 FHVCKEIVKRRKLKVHSIIDSLYMKCNMARVESKVNLPTLQITSKECSMDEMQKENNDMI 1420
            FHV KEI+KR  LK HSIIDSLY +C  AR E K+++P + I++K+CS   MQKE ND  
Sbjct: 980  FHVRKEIMKRTGLKEHSIIDSLYRQCKAARTELKISVPDMLISNKDCSSINMQKECNDAF 1039

Query: 1419 CITVTF-ENLKNSCLQWETARDLVIPFFLGTVIKGFSVIKKVDILWNDRRGVQKS-TGLF 1246
            C+TV   EN K + +  ET +  V+PF L TV+KGF  IKKVDILW D++   KS    F
Sbjct: 1040 CVTVMIVENFKRTSIDLETIQMWVMPFLLKTVVKGFREIKKVDILWKDKQKASKSHDDSF 1099

Query: 1245 GELYLKVFMSADCSRTKIWNALVNNCIQIMDMIDWKRSHPDNINTMFAAYGIDIAWTFFV 1066
            GELYL+V MS  C  T +W+AL+N+C QIMDMIDW RSHPDNI +   AYGID    FF+
Sbjct: 1100 GELYLRVSMSGQCHITSLWSALMNDCHQIMDMIDWTRSHPDNIRSFCLAYGIDAGLQFFL 1159

Query: 1065 KNLKSAISDIGKTILPEHLLLFANHLSSTGEFVGLNAKGMAHQKEQTSVSSPLMQACFSN 886
             NL+SAISD GK ILPEHLL+ AN LS+TGEFVGLNAKG+A Q++ +SVSSP +QA FSN
Sbjct: 1160 TNLESAISDTGKNILPEHLLIVANTLSATGEFVGLNAKGLALQRKHSSVSSPFVQAFFSN 1219

Query: 885  PSACFIKAAKSAVVDNLQGSLDALAWGSTPSLGTAGPFELVYSEKGYELAKPLDVYSLLG 706
            P A FIKAAK+  VDNLQGS+DAL WG  PS+GT G F+++YS +G  L+KP+DVY+LL 
Sbjct: 1220 PGASFIKAAKAGAVDNLQGSVDALGWGKVPSVGTGGHFDIIYSGEGRTLSKPVDVYNLLS 1279

Query: 705  SQISSQEQIVEFDIPNSCSRMLDKCGVKPLYTYGDSPLKGRKNYE---IFLKAIRNYISL 535
            + +SS +Q  +  +  +   + DKCG K    +GD   KG  N +   I    +R   + 
Sbjct: 1280 TPVSS-KQNEKLKVCKAQGLISDKCGAK----FGDFAFKGLGNLDFETISRGVLRKSWTY 1334

Query: 534  NDVQNLSHTWKNILRKYPVNHQLNERDKSTLLVGLERHPRRDEKIGVGVQEIKVGYHPKH 355
            NDV  LS+  K IL KY +  +L+E+DK+T++  L  HPRR+EK+G+   +I+V YHP+H
Sbjct: 1335 NDVLRLSNALKKILHKYSIGQRLSEKDKTTVIRALYFHPRRNEKLGIEPPDIEVTYHPEH 1394

Query: 354  PTSTCFFVVRTDGTIEDFSYHKCVIGWLELIAPRKVKSYESKLQKM 217
              S CF +VR DG+IEDFSYHKCVIG LE+IAP K + Y +K +++
Sbjct: 1395 QNSRCFSLVREDGSIEDFSYHKCVIGALEIIAPEKAEIYRAKWKRL 1440


>ref|XP_007210915.1| hypothetical protein PRUPE_ppa000278mg [Prunus persica]
            gi|462406650|gb|EMJ12114.1| hypothetical protein
            PRUPE_ppa000278mg [Prunus persica]
          Length = 1356

 Score =  996 bits (2574), Expect = 0.0
 Identities = 506/847 (59%), Positives = 631/847 (74%), Gaps = 6/847 (0%)
 Frame = -3

Query: 2751 WLSMRGLTVXXXXXXXXXXXXSRKNMIDEVHCGLLEAEQTCLFKQLLVDSNHDFLVEMGE 2572
            WLSMRGL+V            SR N+++E+ CGL EAEQ C+FKQLLVD+  DFL+   E
Sbjct: 514  WLSMRGLSVSLADLYLASDSGSRNNLMEEILCGLQEAEQACIFKQLLVDNCQDFLMGCAE 573

Query: 2571 ENQNAMTLEVDQLCYEKQKSAALTQGSVYAFKQVFRDIQNLTYRYASWNNSLLAMVKAGS 2392
            EN++ +T + +  C+EKQKSAAL+Q    AFK +FRDIQ+L ++YA  +NSLL M+KAGS
Sbjct: 574  ENRSPLTFDAEYFCHEKQKSAALSQVVHDAFKHIFRDIQSLAHKYAGKDNSLLTMLKAGS 633

Query: 2391 KGNLLKLVQQGLCLGLQHSLVPLSFSLPRQLSCAAWNNQKASNRSQMTWGS----QSYIP 2224
            KGNL KLVQ  +CLGLQHSL+PLSF +P QLSCAAWNNQKA +  Q   G+    +SYIP
Sbjct: 634  KGNLQKLVQHSMCLGLQHSLIPLSFRIPNQLSCAAWNNQKACSLIQKVEGTYECVESYIP 693

Query: 2223 YAVVENSYITGLNPLETFVHSITGRESSFSNHAELPGTLTRKLNFFMRDLYITYDGTVRN 2044
             AVV++S++TGLNPLE FVHS+T R+SSFS +A+LPGTLTRKL F MRDLY  YDGTVRN
Sbjct: 694  SAVVKSSFLTGLNPLECFVHSVTSRDSSFSGNADLPGTLTRKLMFLMRDLYTAYDGTVRN 753

Query: 2043 AYGNQLVQFSYNIEKDTSSSSGMHGFSGENSYACGAMGGQSVGSLAACAISEASYSALDQ 1864
            AYGNQLVQFSY+I+ D S S+       +++ AC  +GGQ VGSL+ACA+SEA+YSALDQ
Sbjct: 754  AYGNQLVQFSYDIDMDKSDSTSTS--HAKSTTACDGIGGQPVGSLSACALSEAAYSALDQ 811

Query: 1863 PISLLEISPLLNLKNVLECGLPKSTADQTMSLFLSEKLGRQRHGFEYGALEVKNHLERLL 1684
            P+SLLE SPLLNLKN+LECG  KS+A QT+SLFLS+KLGR+RHGFEYGALEVKNHL  L 
Sbjct: 812  PVSLLETSPLLNLKNILECGSKKSSAKQTLSLFLSKKLGRRRHGFEYGALEVKNHLVGLT 871

Query: 1683 FSDIVSTVMIIFSPQTCSQTHFSPWVCHFHVCKEIVKRRKLKVHSIIDSLYMKCNMARVE 1504
            FSDIVSTVMIIFS Q+ SQ  FSPWV HFH+CKEIV++R+LKVHS++DSLY +CN AR E
Sbjct: 872  FSDIVSTVMIIFSSQSNSQKRFSPWVTHFHICKEIVRKRRLKVHSVVDSLYARCNSARPE 931

Query: 1503 SKVNLPTLQITSKECSMDEMQKENNDMICITVTF-ENLKNSCLQWETARDLVIPFFLGTV 1327
             K+ L +L ITSK CS  +    ++D  CITVT  EN KNS  Q + ARDLVIPF LGTV
Sbjct: 932  LKIVLRSLLITSKGCSAAQTCNGDDDTFCITVTMPENSKNSSEQLDIARDLVIPFLLGTV 991

Query: 1326 IKGFSVIKKVDILWNDR-RGVQKSTGLFGELYLKVFMSADCSRTKIWNALVNNCIQIMDM 1150
            +KGF  +KKVDILWND  R  +K  G  GELYL+V MS    R ++W+ L++NC+QIMD+
Sbjct: 992  VKGFLEVKKVDILWNDHPRESKKIHGSSGELYLRVSMSGKTGRRRLWSMLMDNCLQIMDL 1051

Query: 1149 IDWKRSHPDNINTMFAAYGIDIAWTFFVKNLKSAISDIGKTILPEHLLLFANHLSSTGEF 970
            IDW RSHPDN++    AYGID  W +F+ NL++A +DIGK ILP+HL+L A+ LS+TGEF
Sbjct: 1052 IDWSRSHPDNVHDYCIAYGIDAGWKYFLNNLETAANDIGKDILPQHLILVADCLSATGEF 1111

Query: 969  VGLNAKGMAHQKEQTSVSSPLMQACFSNPSACFIKAAKSAVVDNLQGSLDALAWGSTPSL 790
            VGLNAKG+A QK  TSVSSP +QACFS+P ACFIKAAK  VVD L GS++ALAWG+TP  
Sbjct: 1112 VGLNAKGIAQQKGHTSVSSPFVQACFSSPGACFIKAAKGGVVDELHGSVEALAWGNTPPS 1171

Query: 789  GTAGPFELVYSEKGYELAKPLDVYSLLGSQISSQEQIVEFDIPNSCSRMLDKCGVKPLYT 610
            GT   F+++YS++G  L+KPL+ Y LLGSQISS  +   F+   + +  LDKC V     
Sbjct: 1172 GTGRQFDILYSKEGLNLSKPLNPYDLLGSQISSSRENA-FETSKAWNNTLDKCDV----- 1225

Query: 609  YGDSPLKGRKNYEIFLKAIRNYISLNDVQNLSHTWKNILRKYPVNHQLNERDKSTLLVGL 430
               + +   K+  +F   IR Y+++ND+Q  + T K ILRKY +N  L E DKS L + L
Sbjct: 1226 ---TSIGLEKSESVFKSVIRKYLTINDIQKWTQTLKRILRKYDINESLTEGDKSILKMAL 1282

Query: 429  ERHPRRDEKIGVGVQEIKVGYHPKHPTSTCFFVVRTDGTIEDFSYHKCVIGWLELIAPRK 250
              HP + +K+G GVQ+IKVG HPKH  + CF +VR D T EDFSYHKCV+G LE++AP +
Sbjct: 1283 HFHPHKVDKMGSGVQDIKVGQHPKHENARCFMLVRIDRTEEDFSYHKCVLGALEIVAPER 1342

Query: 249  VKSYESK 229
             KSY SK
Sbjct: 1343 AKSYRSK 1349


>ref|XP_006573755.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X2
            [Glycine max]
          Length = 1457

 Score =  960 bits (2481), Expect = 0.0
 Identities = 509/915 (55%), Positives = 651/915 (71%), Gaps = 15/915 (1%)
 Frame = -3

Query: 2868 SRESTWLRETDGNLFCSLVKHNQDLVLDYLYAAQEVLCEWLSMRGLTVXXXXXXXXXXXX 2689
            S  S WLR++D N+F SLV+H Q   L++LYAAQ+VLCEWLSM G +V            
Sbjct: 573  SEASGWLRDSDYNVFQSLVEHYQGKTLNFLYAAQKVLCEWLSMTGFSVSLSDLYLSSDSY 632

Query: 2688 SRKNMIDEVHCGLLEAEQTCLFKQLLVDSNHDFLVEMGEENQNAMTLEVDQLCYEKQKSA 2509
            +R+NMI+E+  GL +AE+ C FKQLL+D   DFL    +E++NA+T+  D+L YE+Q SA
Sbjct: 633  ARENMIEEIFYGLQDAERACNFKQLLLDYYCDFLSGSLQESENAITVNADRLNYERQISA 692

Query: 2508 ALTQGSVYAFKQVFRDIQNLTYRYASWNNSLLAMVKAGSKGNLLKLVQQGLCLGLQHSLV 2329
            +L+Q SV AF+QVFR+IQ+L  +YA   NS LAM KAGSKGNLLKLVQ  +CLG+Q+SLV
Sbjct: 693  SLSQASVDAFRQVFRNIQSLADKYACKGNSFLAMFKAGSKGNLLKLVQHSMCLGMQNSLV 752

Query: 2328 PLSFSLPRQLSCAAWNNQKASNRSQMTWGS----QSYIPYAVVENSYITGLNPLETFVHS 2161
             LS+ LPR LSCA WN+QK  +  QM+ G+    QSYIPYAVVE+S++TGLNPLE FVHS
Sbjct: 753  RLSYRLPRHLSCADWNSQKWVDSIQMSSGTLESVQSYIPYAVVESSFLTGLNPLECFVHS 812

Query: 2160 ITGRESSFSNHAELPGTLTRKLNFFMRDLYITYDGTVRNAYGNQLVQFSYNIEKDTSSSS 1981
            +T R+SSFS+HA+LPGTLTR+L FFMRDLY  YDGTVRN YGNQL+QFSY+IE+D+S + 
Sbjct: 813  VTNRDSSFSDHADLPGTLTRRLMFFMRDLYDAYDGTVRNLYGNQLIQFSYDIEEDSSCNK 872

Query: 1980 GMHGFSGENSYACGAMGGQSVGSLAACAISEASYSALDQPISLLEISPLLNLKNVLECGL 1801
            G   +         A+GG+SVG+++ACAISEA+YSAL QP+SLLE SPLLNLKNVLECG 
Sbjct: 873  GFQQY---------ALGGESVGAISACAISEAAYSALGQPVSLLETSPLLNLKNVLECGS 923

Query: 1800 PKSTADQTMSLFLSEKLGRQRHGFEYGALEVKNHLERLLFSDIVSTVMIIFSPQTC-SQT 1624
             K   DQT+SLFLSEKLG+QRHGFEY ALEVKN+LERLLFS+IVS VMIIF+P    SQ 
Sbjct: 924  RKRNGDQTVSLFLSEKLGKQRHGFEYAALEVKNYLERLLFSNIVSKVMIIFTPHDSRSQE 983

Query: 1623 HFSPWVCHFHVCKEIVKRRKLKVHSIIDSLYMKCNMARVESKVNLPTLQITSKECSMDEM 1444
             +SPWVCHFH+ KEIV RRKLKVHSIIDSLY +    R +SKV    L+I+S++CS D M
Sbjct: 984  KYSPWVCHFHLDKEIVTRRKLKVHSIIDSLYQRYYSQRKDSKVCFTNLKISSRKCSADSM 1043

Query: 1443 QKENNDMI--------CITVTF-ENLKNSCLQWETARDLVIPFFLGTVIKGFSVIKKVDI 1291
             KE  D          CI VT  EN KN  +Q ++ RDLVIPF LGT I+GF  +KKVDI
Sbjct: 1044 VKEGEDTSIDKEEGDDCIMVTIVENSKNP-IQLDSVRDLVIPFLLGTAIQGFLDVKKVDI 1102

Query: 1290 LWNDRRGVQKS-TGLFGELYLKVFMSADCSRTKIWNALVNNCIQIMDMIDWKRSHPDNIN 1114
            LWN++  V  S  G  GELYL+V +S++ SR + W  L+  C +IM +IDW RSH DNIN
Sbjct: 1103 LWNNQSKVTNSRNGFSGELYLRVTLSSEGSRGRFWGVLLKLCHKIMHIIDWTRSHTDNIN 1162

Query: 1113 TMFAAYGIDIAWTFFVKNLKSAISDIGKTILPEHLLLFANHLSSTGEFVGLNAKGMAHQK 934
               +AYGID  W +F  +L  A SD GK+ILP+HL L AN LS +GEFVGLNAKGMA Q+
Sbjct: 1163 HFSSAYGIDAGWQYFFNSLACATSDTGKSILPKHLCLVANSLSCSGEFVGLNAKGMALQR 1222

Query: 933  EQTSVSSPLMQACFSNPSACFIKAAKSAVVDNLQGSLDALAWGSTPSLGTAGPFELVYSE 754
            +  SVSSP +QACF+NP +CFIKAAKS   DNLQGSLD LAWG+  S+GT+G F+++YSE
Sbjct: 1223 KHASVSSPFVQACFANPGSCFIKAAKSGATDNLQGSLDGLAWGNCLSMGTSGMFDVIYSE 1282

Query: 753  KGYELAKPLDVYSLLGSQISSQEQIVEFDIPNSCSRMLDKCGVKPLYTYGDSPLKGRKNY 574
            KG+++AK +DVY LL +        +   +    S   DKCG +  +  G + LK  K +
Sbjct: 1283 KGHQVAKSVDVYELLEASFDKPNNKIGTHLHKYSS---DKCGSEFRHKNGYA-LKEGKQW 1338

Query: 573  EIFLKAIRNYISLNDVQNLSHTWKNILRKYPVNHQLNERDKSTLLVGLERHPRRDEKIGV 394
            +  L   RN++++ND+Q L+   + IL KY ++  L+E D+ST+L  L  HP + EK G+
Sbjct: 1339 KTIL---RNFVTVNDIQKLTFASRCILNKYSIDELLSESDRSTMLRVLNFHPHKSEKFGI 1395

Query: 393  GVQEIKVGYHPKHPTSTCFFVVRTDGTIEDFSYHKCVIGWLELIAPRKVKSYESKLQKM* 214
            G Q+IKVG+HPK+  S CF ++RTDGT+EDFSY KC++G L+++ P+K K          
Sbjct: 1396 GPQDIKVGWHPKYKDSRCFHIIRTDGTVEDFSYRKCILGALDIVDPKKSK---------- 1445

Query: 213  QNNVREKKWDWEVDT 169
               ++EKKW    DT
Sbjct: 1446 ---IQEKKWSGHGDT 1457


>ref|XP_006590533.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like [Glycine
            max]
          Length = 1369

 Score =  958 bits (2476), Expect = 0.0
 Identities = 514/902 (56%), Positives = 652/902 (72%), Gaps = 22/902 (2%)
 Frame = -3

Query: 2868 SRESTWLRETDGNLFCSLVKHNQDLVLDYLYAAQEVLCEWLSMRGLTVXXXXXXXXXXXX 2689
            S  S WLR++D N+F SLV+H Q   L++LY AQ+VLCEWLSM G +V            
Sbjct: 487  SEASGWLRDSDYNVFQSLVEHYQGKTLNFLYTAQKVLCEWLSMTGFSVSLSDLYLSSDSY 546

Query: 2688 SRKNMIDEVHCGLLEAEQTCLFKQLLVDSNHDFLVEMGEENQNAMTLEVDQLCYEKQKSA 2509
            +RKNMI+E+  GL +AEQ C FKQLL+D   DFL    +E++NA+T++ D+L YE+Q SA
Sbjct: 547  ARKNMIEEIFYGLQDAEQACNFKQLLLDCYCDFLSGSIQESENAITVDADRLNYERQISA 606

Query: 2508 ALTQGSVYAFKQVFRDIQNLTYRYASWNNSLLAMVKAGSKGNLLKLVQQGLCLGLQHSLV 2329
            AL+Q SV AF+QVFR+IQ+L  +YA  +N+ LAM KAGSKGNLLKLVQ  +CLG+Q+SLV
Sbjct: 607  ALSQASVDAFRQVFRNIQSLADKYACKDNAFLAMFKAGSKGNLLKLVQHSMCLGMQNSLV 666

Query: 2328 PLSFSLPRQLSCAAWNNQKASNRSQMTWGS----QSYIPYAVVENSYITGLNPLETFVHS 2161
             LS+ LPR LSCAAWN+QK  +  QM+ G+    QSYIPYAVVE+S++TGLNPLE FVHS
Sbjct: 667  RLSYRLPRHLSCAAWNSQKWLDSIQMSSGTLESVQSYIPYAVVESSFLTGLNPLECFVHS 726

Query: 2160 ITGRESSFSNHAELPGTLTRKLNFFMRDLYITYDGTVRNAYGNQLVQFSYNIEKDTSSSS 1981
            +T R+SSFS+HA+LPGTLTR+L FFMRDL+  YDGTVRN YGNQL+QFSY+IE+D+S   
Sbjct: 727  VTNRDSSFSDHADLPGTLTRRLMFFMRDLHDAYDGTVRNLYGNQLIQFSYDIEEDSSCDK 786

Query: 1980 GMHGFSGENSYACGAMGGQSVGSLAACAISEASYSALDQPISLLEISPLLNLKNVLECGL 1801
            G   +         A+GG+ VG+++ACAISEA+YSAL QP+SLLE SPLLNLKNVLECG 
Sbjct: 787  GFQEY---------AIGGEPVGAISACAISEAAYSALGQPVSLLETSPLLNLKNVLECGS 837

Query: 1800 PKSTADQTMSLFLSEKLGRQRHGFEYGALEVKNHLERLLFSDIVSTVMIIFSPQT-CSQT 1624
             K   DQT+SLFLSEKLG+QRHGFEY ALEVKN+LERLLFS+IVSTVMIIF+P    SQ 
Sbjct: 838  RKRNGDQTVSLFLSEKLGKQRHGFEYAALEVKNYLERLLFSNIVSTVMIIFTPHDGSSQE 897

Query: 1623 HFSPWVCHFHVCKEIVKRRKLKVHSIIDSLYMKCNMARVESKVNLPTLQITS-KECSMDE 1447
             +SPWVCHFH+ KEIV RRKLKVHSIIDSLY +    R +SKV    L+I+S ++CS D 
Sbjct: 898  KYSPWVCHFHLDKEIVTRRKLKVHSIIDSLYQRYYSQRKDSKVCFTNLKISSNRKCSADS 957

Query: 1446 MQKENNDMI--------CITVTF-ENLKNSCLQWETARDLVIPFFLGTVIKGFSVIKKVD 1294
            M KE  D          CITVT  EN KN  +Q ++ RDLVIPF LGT IKGF  +KKVD
Sbjct: 958  MAKEGEDTSIDKKEGDDCITVTIVENSKNP-IQLDSVRDLVIPFLLGTAIKGFLDVKKVD 1016

Query: 1293 ILWNDRRGVQKS-TGLFGELYLKVFMSADCSRTKIWNALVNNCIQIMDMIDWKRSHPDNI 1117
            +LWN++  V+ S  G  GELYL+V +S++ SR + W  L+N C +IM +IDW RSHPDNI
Sbjct: 1017 VLWNNQSKVKNSCNGFSGELYLRVTLSSEGSRGRFWGVLLNLCHKIMHIIDWTRSHPDNI 1076

Query: 1116 NTMFAAYGIDIAWTFFVKNLKSAISDIGKTILPEHLLLFANHLSSTGEFVGLNAKGMAHQ 937
            N   +AYGID  W +F  +L SA SD GK+ILP+HL L AN LS +GEFVGLNAKGMA Q
Sbjct: 1077 NHFSSAYGIDAGWQYFFNSLASATSDTGKSILPKHLCLVANSLSCSGEFVGLNAKGMALQ 1136

Query: 936  KEQTSVSSPLMQACFSNPSACFIKAAKSAVVDNLQGSLDALAWGSTPSLGTAGPFELVYS 757
            ++  SVSSP +QACF+NP +CFIKAAKS V DNLQGSLDALAWG+  S+GT+G F+++YS
Sbjct: 1137 RKHASVSSPFVQACFANPGSCFIKAAKSGVTDNLQGSLDALAWGNCLSMGTSGMFDIIYS 1196

Query: 756  EKGYELAKPLDVYSLLGSQISSQEQIVEFDIPNSCS------RMLDKCGVKPLYTYGDSP 595
            EK   +AK  +VY LL +          FD PN+ +         DKCG +  +  G + 
Sbjct: 1197 EK---VAKSGNVYELLEA---------SFDKPNNKAGTHLHKYSSDKCGSEFRHKNGYA- 1243

Query: 594  LKGRKNYEIFLKAIRNYISLNDVQNLSHTWKNILRKYPVNHQLNERDKSTLLVGLERHPR 415
            LK  K ++  L   RN++++ND+Q L+   + IL KY ++  L+E D+ST+L  L  HPR
Sbjct: 1244 LKEGKQWKTIL---RNFVTVNDIQKLTFASRCILNKYSIDELLSESDRSTMLRVLNFHPR 1300

Query: 414  RDEKIGVGVQEIKVGYHPKHPTSTCFFVVRTDGTIEDFSYHKCVIGWLELIAPRKVKSYE 235
            + EK G+G Q+IKVG+HPK+  S CF +VR DGT+EDFSY KC++G L+++ P+K K  E
Sbjct: 1301 KSEKFGIGPQDIKVGWHPKYKDSRCFHIVRIDGTVEDFSYRKCILGALDIVDPKKSKIQE 1360

Query: 234  SK 229
             K
Sbjct: 1361 KK 1362


>ref|XP_006573757.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X4
            [Glycine max]
          Length = 1381

 Score =  955 bits (2469), Expect = 0.0
 Identities = 509/916 (55%), Positives = 651/916 (71%), Gaps = 16/916 (1%)
 Frame = -3

Query: 2868 SRESTWLRETDGNLFCSLVKHNQDLVLDYLYAAQEVLCEWLSMRGLTVXXXXXXXXXXXX 2689
            S  S WLR++D N+F SLV+H Q   L++LYAAQ+VLCEWLSM G +V            
Sbjct: 496  SEASGWLRDSDYNVFQSLVEHYQGKTLNFLYAAQKVLCEWLSMTGFSVSLSDLYLSSDSY 555

Query: 2688 SRKNMIDEVHCGLLEAEQTCLFKQLLVDSNHDFLVEMGEENQNAMTLEVDQLCYEKQKSA 2509
            +R+NMI+E+  GL +AE+ C FKQLL+D   DFL    +E++NA+T+  D+L YE+Q SA
Sbjct: 556  ARENMIEEIFYGLQDAERACNFKQLLLDYYCDFLSGSLQESENAITVNADRLNYERQISA 615

Query: 2508 ALTQGSVYAFKQVFRDIQNLTYRYASWNNSLLAMVKAGSKGNLLKLVQQGLCLGLQHSLV 2329
            +L+Q SV AF+QVFR+IQ+L  +YA   NS LAM KAGSKGNLLKLVQ  +CLG+Q+SLV
Sbjct: 616  SLSQASVDAFRQVFRNIQSLADKYACKGNSFLAMFKAGSKGNLLKLVQHSMCLGMQNSLV 675

Query: 2328 PLSFSLPRQLSCAAWNNQKASNRSQMTWGS----QSYIPYAVVENSYITGLNPLETFVHS 2161
             LS+ LPR LSCA WN+QK  +  QM+ G+    QSYIPYAVVE+S++TGLNPLE FVHS
Sbjct: 676  RLSYRLPRHLSCADWNSQKWVDSIQMSSGTLESVQSYIPYAVVESSFLTGLNPLECFVHS 735

Query: 2160 ITGRESSFSNHAELPGTLTRKLNFFMRDLYITYDGTVRNAYGNQLVQFSYNIEKDTSSSS 1981
            +T R+SSFS+HA+LPGTLTR+L FFMRDLY  YDGTVRN YGNQL+QFSY+IE+D+S + 
Sbjct: 736  VTNRDSSFSDHADLPGTLTRRLMFFMRDLYDAYDGTVRNLYGNQLIQFSYDIEEDSSCNK 795

Query: 1980 GMHGFSGENSYACGAMGGQSVGSLAACAISEASYSALDQPISLLEISPLLNLKNVLECGL 1801
            G   +         A+GG+SVG+++ACAISEA+YSAL QP+SLLE SPLLNLKNVLECG 
Sbjct: 796  GFQQY---------ALGGESVGAISACAISEAAYSALGQPVSLLETSPLLNLKNVLECGS 846

Query: 1800 PKSTADQTMSLFLSEKLGRQRHGFEYGALEVKNHLERLLFSDIVSTVMIIFSPQTC-SQT 1624
             K   DQT+SLFLSEKLG+QRHGFEY ALEVKN+LERLLFS+IVS VMIIF+P    SQ 
Sbjct: 847  RKRNGDQTVSLFLSEKLGKQRHGFEYAALEVKNYLERLLFSNIVSKVMIIFTPHDSRSQE 906

Query: 1623 HFSPWVCHFHVCKEIVKRRKLKVHSIIDSLYMKCNMARVESKVNLPTLQITS-KECSMDE 1447
             +SPWVCHFH+ KEIV RRKLKVHSIIDSLY +    R +SKV    L+I+S ++CS D 
Sbjct: 907  KYSPWVCHFHLDKEIVTRRKLKVHSIIDSLYQRYYSQRKDSKVCFTNLKISSSRKCSADS 966

Query: 1446 MQKENNDMI--------CITVTF-ENLKNSCLQWETARDLVIPFFLGTVIKGFSVIKKVD 1294
            M KE  D          CI VT  EN KN  +Q ++ RDLVIPF LGT I+GF  +KKVD
Sbjct: 967  MVKEGEDTSIDKEEGDDCIMVTIVENSKNP-IQLDSVRDLVIPFLLGTAIQGFLDVKKVD 1025

Query: 1293 ILWNDRRGVQKS-TGLFGELYLKVFMSADCSRTKIWNALVNNCIQIMDMIDWKRSHPDNI 1117
            ILWN++  V  S  G  GELYL+V +S++ SR + W  L+  C +IM +IDW RSH DNI
Sbjct: 1026 ILWNNQSKVTNSRNGFSGELYLRVTLSSEGSRGRFWGVLLKLCHKIMHIIDWTRSHTDNI 1085

Query: 1116 NTMFAAYGIDIAWTFFVKNLKSAISDIGKTILPEHLLLFANHLSSTGEFVGLNAKGMAHQ 937
            N   +AYGID  W +F  +L  A SD GK+ILP+HL L AN LS +GEFVGLNAKGMA Q
Sbjct: 1086 NHFSSAYGIDAGWQYFFNSLACATSDTGKSILPKHLCLVANSLSCSGEFVGLNAKGMALQ 1145

Query: 936  KEQTSVSSPLMQACFSNPSACFIKAAKSAVVDNLQGSLDALAWGSTPSLGTAGPFELVYS 757
            ++  SVSSP +QACF+NP +CFIKAAKS   DNLQGSLD LAWG+  S+GT+G F+++YS
Sbjct: 1146 RKHASVSSPFVQACFANPGSCFIKAAKSGATDNLQGSLDGLAWGNCLSMGTSGMFDVIYS 1205

Query: 756  EKGYELAKPLDVYSLLGSQISSQEQIVEFDIPNSCSRMLDKCGVKPLYTYGDSPLKGRKN 577
            EKG+++AK +DVY LL +        +   +    S   DKCG +  +  G + LK  K 
Sbjct: 1206 EKGHQVAKSVDVYELLEASFDKPNNKIGTHLHKYSS---DKCGSEFRHKNGYA-LKEGKQ 1261

Query: 576  YEIFLKAIRNYISLNDVQNLSHTWKNILRKYPVNHQLNERDKSTLLVGLERHPRRDEKIG 397
            ++  L   RN++++ND+Q L+   + IL KY ++  L+E D+ST+L  L  HP + EK G
Sbjct: 1262 WKTIL---RNFVTVNDIQKLTFASRCILNKYSIDELLSESDRSTMLRVLNFHPHKSEKFG 1318

Query: 396  VGVQEIKVGYHPKHPTSTCFFVVRTDGTIEDFSYHKCVIGWLELIAPRKVKSYESKLQKM 217
            +G Q+IKVG+HPK+  S CF ++RTDGT+EDFSY KC++G L+++ P+K K         
Sbjct: 1319 IGPQDIKVGWHPKYKDSRCFHIIRTDGTVEDFSYRKCILGALDIVDPKKSK--------- 1369

Query: 216  *QNNVREKKWDWEVDT 169
                ++EKKW    DT
Sbjct: 1370 ----IQEKKWSGHGDT 1381


>ref|XP_006573754.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X1
            [Glycine max]
          Length = 1458

 Score =  955 bits (2469), Expect = 0.0
 Identities = 509/916 (55%), Positives = 651/916 (71%), Gaps = 16/916 (1%)
 Frame = -3

Query: 2868 SRESTWLRETDGNLFCSLVKHNQDLVLDYLYAAQEVLCEWLSMRGLTVXXXXXXXXXXXX 2689
            S  S WLR++D N+F SLV+H Q   L++LYAAQ+VLCEWLSM G +V            
Sbjct: 573  SEASGWLRDSDYNVFQSLVEHYQGKTLNFLYAAQKVLCEWLSMTGFSVSLSDLYLSSDSY 632

Query: 2688 SRKNMIDEVHCGLLEAEQTCLFKQLLVDSNHDFLVEMGEENQNAMTLEVDQLCYEKQKSA 2509
            +R+NMI+E+  GL +AE+ C FKQLL+D   DFL    +E++NA+T+  D+L YE+Q SA
Sbjct: 633  ARENMIEEIFYGLQDAERACNFKQLLLDYYCDFLSGSLQESENAITVNADRLNYERQISA 692

Query: 2508 ALTQGSVYAFKQVFRDIQNLTYRYASWNNSLLAMVKAGSKGNLLKLVQQGLCLGLQHSLV 2329
            +L+Q SV AF+QVFR+IQ+L  +YA   NS LAM KAGSKGNLLKLVQ  +CLG+Q+SLV
Sbjct: 693  SLSQASVDAFRQVFRNIQSLADKYACKGNSFLAMFKAGSKGNLLKLVQHSMCLGMQNSLV 752

Query: 2328 PLSFSLPRQLSCAAWNNQKASNRSQMTWGS----QSYIPYAVVENSYITGLNPLETFVHS 2161
             LS+ LPR LSCA WN+QK  +  QM+ G+    QSYIPYAVVE+S++TGLNPLE FVHS
Sbjct: 753  RLSYRLPRHLSCADWNSQKWVDSIQMSSGTLESVQSYIPYAVVESSFLTGLNPLECFVHS 812

Query: 2160 ITGRESSFSNHAELPGTLTRKLNFFMRDLYITYDGTVRNAYGNQLVQFSYNIEKDTSSSS 1981
            +T R+SSFS+HA+LPGTLTR+L FFMRDLY  YDGTVRN YGNQL+QFSY+IE+D+S + 
Sbjct: 813  VTNRDSSFSDHADLPGTLTRRLMFFMRDLYDAYDGTVRNLYGNQLIQFSYDIEEDSSCNK 872

Query: 1980 GMHGFSGENSYACGAMGGQSVGSLAACAISEASYSALDQPISLLEISPLLNLKNVLECGL 1801
            G   +         A+GG+SVG+++ACAISEA+YSAL QP+SLLE SPLLNLKNVLECG 
Sbjct: 873  GFQQY---------ALGGESVGAISACAISEAAYSALGQPVSLLETSPLLNLKNVLECGS 923

Query: 1800 PKSTADQTMSLFLSEKLGRQRHGFEYGALEVKNHLERLLFSDIVSTVMIIFSPQTC-SQT 1624
             K   DQT+SLFLSEKLG+QRHGFEY ALEVKN+LERLLFS+IVS VMIIF+P    SQ 
Sbjct: 924  RKRNGDQTVSLFLSEKLGKQRHGFEYAALEVKNYLERLLFSNIVSKVMIIFTPHDSRSQE 983

Query: 1623 HFSPWVCHFHVCKEIVKRRKLKVHSIIDSLYMKCNMARVESKVNLPTLQITS-KECSMDE 1447
             +SPWVCHFH+ KEIV RRKLKVHSIIDSLY +    R +SKV    L+I+S ++CS D 
Sbjct: 984  KYSPWVCHFHLDKEIVTRRKLKVHSIIDSLYQRYYSQRKDSKVCFTNLKISSSRKCSADS 1043

Query: 1446 MQKENNDMI--------CITVTF-ENLKNSCLQWETARDLVIPFFLGTVIKGFSVIKKVD 1294
            M KE  D          CI VT  EN KN  +Q ++ RDLVIPF LGT I+GF  +KKVD
Sbjct: 1044 MVKEGEDTSIDKEEGDDCIMVTIVENSKNP-IQLDSVRDLVIPFLLGTAIQGFLDVKKVD 1102

Query: 1293 ILWNDRRGVQKS-TGLFGELYLKVFMSADCSRTKIWNALVNNCIQIMDMIDWKRSHPDNI 1117
            ILWN++  V  S  G  GELYL+V +S++ SR + W  L+  C +IM +IDW RSH DNI
Sbjct: 1103 ILWNNQSKVTNSRNGFSGELYLRVTLSSEGSRGRFWGVLLKLCHKIMHIIDWTRSHTDNI 1162

Query: 1116 NTMFAAYGIDIAWTFFVKNLKSAISDIGKTILPEHLLLFANHLSSTGEFVGLNAKGMAHQ 937
            N   +AYGID  W +F  +L  A SD GK+ILP+HL L AN LS +GEFVGLNAKGMA Q
Sbjct: 1163 NHFSSAYGIDAGWQYFFNSLACATSDTGKSILPKHLCLVANSLSCSGEFVGLNAKGMALQ 1222

Query: 936  KEQTSVSSPLMQACFSNPSACFIKAAKSAVVDNLQGSLDALAWGSTPSLGTAGPFELVYS 757
            ++  SVSSP +QACF+NP +CFIKAAKS   DNLQGSLD LAWG+  S+GT+G F+++YS
Sbjct: 1223 RKHASVSSPFVQACFANPGSCFIKAAKSGATDNLQGSLDGLAWGNCLSMGTSGMFDVIYS 1282

Query: 756  EKGYELAKPLDVYSLLGSQISSQEQIVEFDIPNSCSRMLDKCGVKPLYTYGDSPLKGRKN 577
            EKG+++AK +DVY LL +        +   +    S   DKCG +  +  G + LK  K 
Sbjct: 1283 EKGHQVAKSVDVYELLEASFDKPNNKIGTHLHKYSS---DKCGSEFRHKNGYA-LKEGKQ 1338

Query: 576  YEIFLKAIRNYISLNDVQNLSHTWKNILRKYPVNHQLNERDKSTLLVGLERHPRRDEKIG 397
            ++  L   RN++++ND+Q L+   + IL KY ++  L+E D+ST+L  L  HP + EK G
Sbjct: 1339 WKTIL---RNFVTVNDIQKLTFASRCILNKYSIDELLSESDRSTMLRVLNFHPHKSEKFG 1395

Query: 396  VGVQEIKVGYHPKHPTSTCFFVVRTDGTIEDFSYHKCVIGWLELIAPRKVKSYESKLQKM 217
            +G Q+IKVG+HPK+  S CF ++RTDGT+EDFSY KC++G L+++ P+K K         
Sbjct: 1396 IGPQDIKVGWHPKYKDSRCFHIIRTDGTVEDFSYRKCILGALDIVDPKKSK--------- 1446

Query: 216  *QNNVREKKWDWEVDT 169
                ++EKKW    DT
Sbjct: 1447 ----IQEKKWSGHGDT 1458


>ref|XP_006573756.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X3
            [Glycine max]
          Length = 1455

 Score =  946 bits (2445), Expect = 0.0
 Identities = 508/916 (55%), Positives = 649/916 (70%), Gaps = 16/916 (1%)
 Frame = -3

Query: 2868 SRESTWLRETDGNLFCSLVKHNQDLVLDYLYAAQEVLCEWLSMRGLTVXXXXXXXXXXXX 2689
            S  S WLR++D N+F SLV+H Q   L++LYAAQ+VLCEWLSM G +V            
Sbjct: 573  SEASGWLRDSDYNVFQSLVEHYQGKTLNFLYAAQKVLCEWLSMTGFSVSLSDLYLSSDSY 632

Query: 2688 SRKNMIDEVHCGLLEAEQTCLFKQLLVDSNHDFLVEMGEENQNAMTLEVDQLCYEKQKSA 2509
            +R+NMI+E+  GL +AE+ C FKQLL+D   DFL    +E++NA+T+  D+L YE+Q SA
Sbjct: 633  ARENMIEEIFYGLQDAERACNFKQLLLDYYCDFLSGSLQESENAITVNADRLNYERQISA 692

Query: 2508 ALTQGSVYAFKQVFRDIQNLTYRYASWNNSLLAMVKAGSKGNLLKLVQQGLCLGLQHSLV 2329
            +L+Q SV AF+QVFR+IQ+L  +YA   NS LAM KAGSKGNLLKLVQ  +CLG+Q+SLV
Sbjct: 693  SLSQASVDAFRQVFRNIQSLADKYACKGNSFLAMFKAGSKGNLLKLVQHSMCLGMQNSLV 752

Query: 2328 PLSFSLPRQLSCAAWNNQKASNRSQMTWGS----QSYIPYAVVENSYITGLNPLETFVHS 2161
             LS+ LPR LSCA WN+QK  +  QM+ G+    QSYIPYAVVE+S++TGLNPLE FVHS
Sbjct: 753  RLSYRLPRHLSCADWNSQKWVDSIQMSSGTLESVQSYIPYAVVESSFLTGLNPLECFVHS 812

Query: 2160 ITGRESSFSNHAELPGTLTRKLNFFMRDLYITYDGTVRNAYGNQLVQFSYNIEKDTSSSS 1981
            +T R+SSFS+HA+LPGTLTR+L FFMRDLY  YDGTVRN YGNQL+QFSY+IE+D+S + 
Sbjct: 813  VTNRDSSFSDHADLPGTLTRRLMFFMRDLYDAYDGTVRNLYGNQLIQFSYDIEEDSSCNK 872

Query: 1980 GMHGFSGENSYACGAMGGQSVGSLAACAISEASYSALDQPISLLEISPLLNLKNVLECGL 1801
            G   +         A+GG+SVG+++ACAISEA+YSAL QP+SLLE SPLLNLKNVLECG 
Sbjct: 873  GFQQY---------ALGGESVGAISACAISEAAYSALGQPVSLLETSPLLNLKNVLECGS 923

Query: 1800 PKSTADQTMSLFLSEKLGRQRHGFEYGALEVKNHLERLLFSDIVSTVMIIFSP-QTCSQT 1624
             K   DQT+SLFLSEKLG+QRHGFEY ALEVKN+LERLLFS+IVS VMIIF+P  + SQ 
Sbjct: 924  RKRNGDQTVSLFLSEKLGKQRHGFEYAALEVKNYLERLLFSNIVSKVMIIFTPHDSRSQE 983

Query: 1623 HFSPWVCHFHVCKEIVKRRKLKVHSIIDSLYMKCNMARVESKVNLPTLQI-TSKECSMDE 1447
             +SPWVCHFH+ KEIV RRKLKVHSIIDSLY +    R +SKV    L+I +S++CS D 
Sbjct: 984  KYSPWVCHFHLDKEIVTRRKLKVHSIIDSLYQRYYSQRKDSKVCFTNLKISSSRKCSADS 1043

Query: 1446 MQKENNDMI--------CITVTF-ENLKNSCLQWETARDLVIPFFLGTVIKGFSVIKKVD 1294
            M KE  D          CI VT  EN KN  +Q ++ RDLVIPF LGT I+GF  +KKVD
Sbjct: 1044 MVKEGEDTSIDKEEGDDCIMVTIVENSKNP-IQLDSVRDLVIPFLLGTAIQGFLDVKKVD 1102

Query: 1293 ILWNDRRGVQKS-TGLFGELYLKVFMSADCSRTKIWNALVNNCIQIMDMIDWKRSHPDNI 1117
            ILWN++  V  S  G  GELYL+V +S++ SR + W  L+  C +IM +IDW RSH DNI
Sbjct: 1103 ILWNNQSKVTNSRNGFSGELYLRVTLSSEGSRGRFWGVLLKLCHKIMHIIDWTRSHTDNI 1162

Query: 1116 NTMFAAYGIDIAWTFFVKNLKSAISDIGKTILPEHLLLFANHLSSTGEFVGLNAKGMAHQ 937
            N   +AYGID  W +F  +L  A SD GK+ILP+HL L AN LS +GEFVGLNAKGMA Q
Sbjct: 1163 NHFSSAYGIDAGWQYFFNSLACATSDTGKSILPKHLCLVANSLSCSGEFVGLNAKGMALQ 1222

Query: 936  KEQTSVSSPLMQACFSNPSACFIKAAKSAVVDNLQGSLDALAWGSTPSLGTAGPFELVYS 757
            ++  SVSSP +QACF+NP +CFIKAAKS   DNLQGSLD LAWG+  S+GT+G F+++YS
Sbjct: 1223 RKHASVSSPFVQACFANPGSCFIKAAKSGATDNLQGSLDGLAWGNCLSMGTSGMFDVIYS 1282

Query: 756  EKGYELAKPLDVYSLLGSQISSQEQIVEFDIPNSCSRMLDKCGVKPLYTYGDSPLKGRKN 577
            EK   +AK +DVY LL +        +   +    S   DKCG +  +  G + LK  K 
Sbjct: 1283 EK---VAKSVDVYELLEASFDKPNNKIGTHLHKYSS---DKCGSEFRHKNGYA-LKEGKQ 1335

Query: 576  YEIFLKAIRNYISLNDVQNLSHTWKNILRKYPVNHQLNERDKSTLLVGLERHPRRDEKIG 397
            ++  L   RN++++ND+Q L+   + IL KY ++  L+E D+ST+L  L  HP + EK G
Sbjct: 1336 WKTIL---RNFVTVNDIQKLTFASRCILNKYSIDELLSESDRSTMLRVLNFHPHKSEKFG 1392

Query: 396  VGVQEIKVGYHPKHPTSTCFFVVRTDGTIEDFSYHKCVIGWLELIAPRKVKSYESKLQKM 217
            +G Q+IKVG+HPK+  S CF ++RTDGT+EDFSY KC++G L+++ P+K K         
Sbjct: 1393 IGPQDIKVGWHPKYKDSRCFHIIRTDGTVEDFSYRKCILGALDIVDPKKSK--------- 1443

Query: 216  *QNNVREKKWDWEVDT 169
                ++EKKW    DT
Sbjct: 1444 ----IQEKKWSGHGDT 1455


>ref|XP_004511611.1| PREDICTED: DNA-directed RNA polymerase D subunit 1-like isoform X5
            [Cicer arietinum]
          Length = 1474

 Score =  942 bits (2436), Expect = 0.0
 Identities = 506/913 (55%), Positives = 639/913 (69%), Gaps = 12/913 (1%)
 Frame = -3

Query: 2868 SRESTWLRETDGNLFCSLVKHNQDLVLDYLYAAQEVLCEWLSMRGLTVXXXXXXXXXXXX 2689
            S  S WLR++D N+F SLV+H Q   LD L+ AQ+ LCEWLSM G +V            
Sbjct: 582  SEASGWLRDSDNNVFQSLVEHFQGKTLDILHGAQKALCEWLSMTGFSVSLSDLYLSSDSY 641

Query: 2688 SRKNMIDEVHCGLLEAEQTCLFKQLLVDSNHDFLVEMGEENQNAMTLEVDQLCYEKQKSA 2509
            +RKNMI+E+  GL EAEQ C F QLLVD   DFL    +E +N + ++VD L YE+Q SA
Sbjct: 642  ARKNMIEEISYGLQEAEQACDFNQLLVDYCCDFLSGSLQEIENLVAVDVDCLNYERQISA 701

Query: 2508 ALTQGSVYAFKQVFRDIQNLTYRYASWNNSLLAMVKAGSKGNLLKLVQQGLCLGLQHSLV 2329
            AL+Q SV AF+QVFR+IQ+L  +YA  +N+ LAM KAGSKGNLLKLVQ  +CLGLQHSLV
Sbjct: 702  ALSQASVDAFRQVFRNIQSLADKYACKDNAFLAMFKAGSKGNLLKLVQHSMCLGLQHSLV 761

Query: 2328 PLSFSLPRQLSCAAWNNQKASNR-SQMTWGSQSYIPYAVVENSYITGLNPLETFVHSITG 2152
             L + +PR+LSCAAWN+QK     S      QSYIPYAVVE+S++TGLNPLE FVHS+T 
Sbjct: 762  RLPYKIPRKLSCAAWNSQKGMQIFSDTVEPVQSYIPYAVVESSFLTGLNPLECFVHSVTN 821

Query: 2151 RESSFSNHAELPGTLTRKLNFFMRDLYITYDGTVRNAYGNQLVQFSYNIEKDTSSSSGMH 1972
            R+SSFS++A+LPGTLTR+L FFMRD+Y  YDGTVRN YGNQL+QFSY+ E+D+S  S   
Sbjct: 822  RDSSFSDNADLPGTLTRRLMFFMRDMYDAYDGTVRNLYGNQLIQFSYDAEEDSSCDS--- 878

Query: 1971 GFSGENSYACGAMGGQSVGSLAACAISEASYSALDQPISLLEISPLLNLKNVLECGLPKS 1792
                   +    +GG+ VG+L+ACA+SEA+YSAL QPISLLE SPLLNLK VLECG  K 
Sbjct: 879  ------HFREDTIGGEPVGTLSACAVSEAAYSALSQPISLLEASPLLNLKYVLECGSRKR 932

Query: 1791 TADQTMSLFLSEKLGRQRHGFEYGALEVKNHLERLLFSDIVSTVMIIFSPQTCSQTHFSP 1612
              DQT+SLFLSEK+G+QR+GFEY ALEVKN+LERL+FSDIVSTVMIIF+PQ+ S   +SP
Sbjct: 933  GGDQTVSLFLSEKIGKQRNGFEYAALEVKNYLERLMFSDIVSTVMIIFTPQSRSLEKYSP 992

Query: 1611 WVCHFHVCKEIVKRRKLKVHSIIDSLYMKCNMARVESKVNLPTLQITSKECSMDEMQKEN 1432
            WVCHFH+ KE V RR L+VHSIIDSLY + +  R  SKV LP L+I++K+CS+  M KE 
Sbjct: 993  WVCHFHLDKENVTRRNLEVHSIIDSLYQRYDSLRKGSKVTLPNLKISTKKCSVHYMAKEG 1052

Query: 1431 NDMI---------CITVTF-ENLKNSCLQWETARDLVIPFFLGTVIKGFSVIKKVDILWN 1282
             +           CITVT  EN  NS +Q +  R+++IPF L T IKG   IKKVDILW 
Sbjct: 1053 GETSVDKEIDGEDCITVTIVENYMNS-VQLDVVRNMMIPFLLRTAIKGIFEIKKVDILWK 1111

Query: 1281 D-RRGVQKSTGLFGELYLKVFMSADCSRTKIWNALVNNCIQIMDMIDWKRSHPDNINTMF 1105
            D  +G +   G  GELYL+V MS+D  R   W AL+N+C +IM MIDW RSHPDNI+   
Sbjct: 1112 DLSKGSKSYNGSSGELYLRVTMSSDSDRGTFWGALINHCHRIMPMIDWARSHPDNIHHFC 1171

Query: 1104 AAYGIDIAWTFFVKNLKSAISDIGKTILPEHLLLFANHLSSTGEFVGLNAKGMAHQKEQT 925
            +A+GID  W  F+ NL SA SD G +ILP+HL L AN LS++GEFVGLN+KGMA Q+   
Sbjct: 1172 SAFGIDAGWQHFLHNLSSATSDTGTSILPKHLRLVANSLSASGEFVGLNSKGMARQRNHA 1231

Query: 924  SVSSPLMQACFSNPSACFIKAAKSAVVDNLQGSLDALAWGSTPSLGTAGPFELVYSEKGY 745
            SVSSP +QACFSNP + F+KAAKS VVDNLQG+LD LAWG+  S+GT+G F+++YSEK  
Sbjct: 1232 SVSSPFVQACFSNPGSTFLKAAKSGVVDNLQGTLDGLAWGNCLSMGTSGQFDVMYSEKVQ 1291

Query: 744  ELAKPLDVYSLLGSQISSQEQIVEFDIPNSCSRMLDKCGVKPLYTYGDSPLKGRKNYEIF 565
            ELAK +DVY LL +     +Q +     N+ S   DKC  +  +  G    K  K ++  
Sbjct: 1292 ELAKSVDVYDLLETSFDQLDQEINTSQSNNYSS--DKCNSQFRHKKGRYAPKEPKQWK-- 1347

Query: 564  LKAIRNYISLNDVQNLSHTWKNILRKYPVNHQLNERDKSTLLVGLERHPRRDEKIGVGVQ 385
               IRN+++ ND+Q L+   + IL KYP++  L+ERDK T++  L  HPRR+EK+G G Q
Sbjct: 1348 -SVIRNFMTANDIQKLTSASRFILNKYPIDQILSERDKLTIMKVLHFHPRRNEKLGSGPQ 1406

Query: 384  EIKVGYHPKHPTSTCFFVVRTDGTIEDFSYHKCVIGWLELIAPRKVKSYESKLQKM*QNN 205
             IKVG+HPK   S CFF++RTDGT+EDFSY KC++G L+++ P K     SK+QK     
Sbjct: 1407 HIKVGWHPKFTDSRCFFIIRTDGTVEDFSYRKCILGALDVVDPEK-----SKIQK----- 1456

Query: 204  VREKKWDWEVDTQ 166
               KKW    DT+
Sbjct: 1457 ---KKWSGHDDTE 1466


>ref|XP_004511607.1| PREDICTED: DNA-directed RNA polymerase D subunit 1-like isoform X1
            [Cicer arietinum] gi|502160026|ref|XP_004511608.1|
            PREDICTED: DNA-directed RNA polymerase D subunit 1-like
            isoform X2 [Cicer arietinum]
            gi|502160029|ref|XP_004511609.1| PREDICTED: DNA-directed
            RNA polymerase D subunit 1-like isoform X3 [Cicer
            arietinum] gi|502160032|ref|XP_004511610.1| PREDICTED:
            DNA-directed RNA polymerase D subunit 1-like isoform X4
            [Cicer arietinum]
          Length = 1475

 Score =  938 bits (2425), Expect = 0.0
 Identities = 506/914 (55%), Positives = 639/914 (69%), Gaps = 13/914 (1%)
 Frame = -3

Query: 2868 SRESTWLRETDGNLFCSLVKHNQDLVLDYLYAAQEVLCEWLSMRGLTVXXXXXXXXXXXX 2689
            S  S WLR++D N+F SLV+H Q   LD L+ AQ+ LCEWLSM G +V            
Sbjct: 582  SEASGWLRDSDNNVFQSLVEHFQGKTLDILHGAQKALCEWLSMTGFSVSLSDLYLSSDSY 641

Query: 2688 SRKNMIDEVHCGLLEAEQTCLFKQLLVDSNHDFLVEMGEENQNAMTLEVDQLCYEKQKSA 2509
            +RKNMI+E+  GL EAEQ C F QLLVD   DFL    +E +N + ++VD L YE+Q SA
Sbjct: 642  ARKNMIEEISYGLQEAEQACDFNQLLVDYCCDFLSGSLQEIENLVAVDVDCLNYERQISA 701

Query: 2508 ALTQGSVYAFKQVFRDIQNLTYRYASWNNSLLAMVKAGSKGNLLKLVQQGLCLGLQHSLV 2329
            AL+Q SV AF+QVFR+IQ+L  +YA  +N+ LAM KAGSKGNLLKLVQ  +CLGLQHSLV
Sbjct: 702  ALSQASVDAFRQVFRNIQSLADKYACKDNAFLAMFKAGSKGNLLKLVQHSMCLGLQHSLV 761

Query: 2328 PLSFSLPRQLSCAAWNNQKASNR-SQMTWGSQSYIPYAVVENSYITGLNPLETFVHSITG 2152
             L + +PR+LSCAAWN+QK     S      QSYIPYAVVE+S++TGLNPLE FVHS+T 
Sbjct: 762  RLPYKIPRKLSCAAWNSQKGMQIFSDTVEPVQSYIPYAVVESSFLTGLNPLECFVHSVTN 821

Query: 2151 RESSFSNHAELPGTLTRKLNFFMRDLYITYDGTVRNAYGNQLVQFSYNIEKDTSSSSGMH 1972
            R+SSFS++A+LPGTLTR+L FFMRD+Y  YDGTVRN YGNQL+QFSY+ E+D+S  S   
Sbjct: 822  RDSSFSDNADLPGTLTRRLMFFMRDMYDAYDGTVRNLYGNQLIQFSYDAEEDSSCDS--- 878

Query: 1971 GFSGENSYACGAMGGQSVGSLAACAISEASYSALDQPISLLEISPLLNLKNVLECGLPKS 1792
                   +    +GG+ VG+L+ACA+SEA+YSAL QPISLLE SPLLNLK VLECG  K 
Sbjct: 879  ------HFREDTIGGEPVGTLSACAVSEAAYSALSQPISLLEASPLLNLKYVLECGSRKR 932

Query: 1791 TADQTMSLFLSEKLGRQRHGFEYGALEVKNHLERLLFSDIVSTVMIIFSPQTCSQTHFSP 1612
              DQT+SLFLSEK+G+QR+GFEY ALEVKN+LERL+FSDIVSTVMIIF+PQ+ S   +SP
Sbjct: 933  GGDQTVSLFLSEKIGKQRNGFEYAALEVKNYLERLMFSDIVSTVMIIFTPQSRSLEKYSP 992

Query: 1611 WVCHFHVCKEIVKRRKLKVHSIIDSLYMKCNMARVESKVNLPTLQI-TSKECSMDEMQKE 1435
            WVCHFH+ KE V RR L+VHSIIDSLY + +  R  SKV LP L+I T+++CS+  M KE
Sbjct: 993  WVCHFHLDKENVTRRNLEVHSIIDSLYQRYDSLRKGSKVTLPNLKISTNRKCSVHYMAKE 1052

Query: 1434 NNDMI---------CITVTF-ENLKNSCLQWETARDLVIPFFLGTVIKGFSVIKKVDILW 1285
              +           CITVT  EN  NS +Q +  R+++IPF L T IKG   IKKVDILW
Sbjct: 1053 GGETSVDKEIDGEDCITVTIVENYMNS-VQLDVVRNMMIPFLLRTAIKGIFEIKKVDILW 1111

Query: 1284 ND-RRGVQKSTGLFGELYLKVFMSADCSRTKIWNALVNNCIQIMDMIDWKRSHPDNINTM 1108
             D  +G +   G  GELYL+V MS+D  R   W AL+N+C +IM MIDW RSHPDNI+  
Sbjct: 1112 KDLSKGSKSYNGSSGELYLRVTMSSDSDRGTFWGALINHCHRIMPMIDWARSHPDNIHHF 1171

Query: 1107 FAAYGIDIAWTFFVKNLKSAISDIGKTILPEHLLLFANHLSSTGEFVGLNAKGMAHQKEQ 928
             +A+GID  W  F+ NL SA SD G +ILP+HL L AN LS++GEFVGLN+KGMA Q+  
Sbjct: 1172 CSAFGIDAGWQHFLHNLSSATSDTGTSILPKHLRLVANSLSASGEFVGLNSKGMARQRNH 1231

Query: 927  TSVSSPLMQACFSNPSACFIKAAKSAVVDNLQGSLDALAWGSTPSLGTAGPFELVYSEKG 748
             SVSSP +QACFSNP + F+KAAKS VVDNLQG+LD LAWG+  S+GT+G F+++YSEK 
Sbjct: 1232 ASVSSPFVQACFSNPGSTFLKAAKSGVVDNLQGTLDGLAWGNCLSMGTSGQFDVMYSEKV 1291

Query: 747  YELAKPLDVYSLLGSQISSQEQIVEFDIPNSCSRMLDKCGVKPLYTYGDSPLKGRKNYEI 568
             ELAK +DVY LL +     +Q +     N+ S   DKC  +  +  G    K  K ++ 
Sbjct: 1292 QELAKSVDVYDLLETSFDQLDQEINTSQSNNYSS--DKCNSQFRHKKGRYAPKEPKQWK- 1348

Query: 567  FLKAIRNYISLNDVQNLSHTWKNILRKYPVNHQLNERDKSTLLVGLERHPRRDEKIGVGV 388
                IRN+++ ND+Q L+   + IL KYP++  L+ERDK T++  L  HPRR+EK+G G 
Sbjct: 1349 --SVIRNFMTANDIQKLTSASRFILNKYPIDQILSERDKLTIMKVLHFHPRRNEKLGSGP 1406

Query: 387  QEIKVGYHPKHPTSTCFFVVRTDGTIEDFSYHKCVIGWLELIAPRKVKSYESKLQKM*QN 208
            Q IKVG+HPK   S CFF++RTDGT+EDFSY KC++G L+++ P K     SK+QK    
Sbjct: 1407 QHIKVGWHPKFTDSRCFFIIRTDGTVEDFSYRKCILGALDVVDPEK-----SKIQK---- 1457

Query: 207  NVREKKWDWEVDTQ 166
                KKW    DT+
Sbjct: 1458 ----KKWSGHDDTE 1467


>gb|EXC17779.1| DNA-directed RNA polymerase D subunit 1 [Morus notabilis]
          Length = 1410

 Score =  938 bits (2424), Expect = 0.0
 Identities = 498/895 (55%), Positives = 629/895 (70%), Gaps = 8/895 (0%)
 Frame = -3

Query: 2859 STWLRETDGNLFCSLVKHNQDLVLDYLYAAQEVLCEWLSMRGLTVXXXXXXXXXXXXSRK 2680
            S+WLR+TD N+F SL K+  D VLD L+AAQE+LCEWLS RGL+V            S K
Sbjct: 537  SSWLRDTD-NIFQSLAKNFPDKVLDILFAAQEILCEWLSTRGLSVSLLDLNLSSDPSSWK 595

Query: 2679 NMIDEVHCGLLEAEQTCLFKQLLVDSNHDFLVEMGEENQNAMTLEVDQLCYEKQKSAALT 2500
            NM DE+  GL EAEQ C+FKQLL ++  DFL E   E+ + ++L+V++L ++KQ+SA L+
Sbjct: 596  NMKDEIFYGLQEAEQACMFKQLL-NTCWDFLTEDSMEDLSPISLQVEKLSHDKQRSAVLS 654

Query: 2499 QGSVYAFKQVFRDIQNLTYRYASWNNSLLAMVKAGSKGNLLKLVQQGLCLGLQHSLVPLS 2320
            Q S+ AFK+VFRDIQ L +RYA  +NSLL M+KAGSKGNLLKLVQ  +CLGLQHSLVPLS
Sbjct: 655  QASIDAFKKVFRDIQTLAFRYACEDNSLLTMLKAGSKGNLLKLVQHSMCLGLQHSLVPLS 714

Query: 2319 FSLPRQLSCAAWNNQKAS----NRSQMTWGSQSYIPYAVVENSYITGLNPLETFVHSITG 2152
            F  P  LSCAAWN  K S      +     ++SYIPYAVV NS++TGLNPLE+FVHS+T 
Sbjct: 715  FGFPHLLSCAAWNEHKVSCLIQEDADAPKSAKSYIPYAVVGNSFLTGLNPLESFVHSVTS 774

Query: 2151 RESSFSNHAELPGTLTRKLNFFMRDLYITYDGTVRNAYGNQLVQFSYNIEKDTSSSSGMH 1972
            RESSFS++AELPGTL R+L +FMRDLYI YDGT+RN+YG+ +VQF Y  ++ TS      
Sbjct: 775  RESSFSDNAELPGTLHRRLMYFMRDLYIAYDGTIRNSYGSHVVQFYYGTDEGTSE----- 829

Query: 1971 GFSGENSYACGAMGGQSVGSLAACAISEASYSALDQPISLLEISPLLNLKNVLECGLPKS 1792
                        + GQ VGSL+ACAISEA+YSALDQPISLLE SPLLNLKN LECG  K 
Sbjct: 830  ------------IAGQPVGSLSACAISEAAYSALDQPISLLETSPLLNLKNALECGSKKR 877

Query: 1791 TADQTMSLFLSEKLGRQRHGFEYGALEVKNHLERLLFSDIVSTVMIIFSPQTCSQTH--- 1621
               QTM L+LS +LGRQRHG+EY ALEVKN+LE L+FSDIVSTVMI F+ Q  SQ     
Sbjct: 878  QGGQTMLLYLSRRLGRQRHGYEYAALEVKNYLEALMFSDIVSTVMITFTSQAGSQKSQKS 937

Query: 1620 FSPWVCHFHVCKEIVKRRKLKVHSIIDSLYMKCNMARVESKVNLPTLQITSKECSMDEMQ 1441
            FSPW        EI++RR+L V S+I+SLY + + +R  SKV LP L+I SK+CS+   +
Sbjct: 938  FSPW--------EILRRRRLTVQSVINSLYERHSTSRKGSKVKLPNLRIRSKDCSVPATR 989

Query: 1440 KENNDMICITVTFENLKNSCLQWETARDLVIPFFLGTVIKGFSVIKKVDILWNDRRGVQK 1261
            +E+ND  CITV+ E  KNS +Q  T +DL+IPF L T++KGF  I+KVDILW+DR    K
Sbjct: 990  EEDNDTCCITVSIECSKNSVIQLITVQDLLIPFLLETIVKGFREIEKVDILWSDRSNTSK 1049

Query: 1260 ST-GLFGELYLKVFMSADCSRTKIWNALVNNCIQIMDMIDWKRSHPDNINTMFAAYGIDI 1084
            +T    GELYLKV MS D      W+ L+N+C++IMD+IDW RSHP+N+N   + YGID 
Sbjct: 1050 ATRDSSGELYLKVSMSGDSGVKSYWSTLMNDCLRIMDLIDWSRSHPENVNEFCSVYGIDS 1109

Query: 1083 AWTFFVKNLKSAISDIGKTILPEHLLLFANHLSSTGEFVGLNAKGMAHQKEQTSVSSPLM 904
             W FF+ NL+SA+SD+GKTILPEHLLL AN LS TG FVGL  KG+A Q+E  SV++P  
Sbjct: 1110 GWKFFLNNLESAVSDVGKTILPEHLLLVANTLSVTGNFVGLTPKGLARQREHASVATPFS 1169

Query: 903  QACFSNPSACFIKAAKSAVVDNLQGSLDALAWGSTPSLGTAGPFELVYSEKGYELAKPLD 724
            QACFSNP+ACFIKAAK+ V D L G+LDALAWG+ P LGT G FELV+S KG+E+ KP++
Sbjct: 1170 QACFSNPAACFIKAAKAEVTDGLHGTLDALAWGNIPPLGTGGQFELVFSGKGHEVDKPIN 1229

Query: 723  VYSLLGSQISSQEQIVEFDIPNSCSRMLDKCGVKPLYTYGDSPLKGRKNYEIFLKAIRNY 544
            VY +L + IS   Q V  + P++ +    K G   L  Y  S  +G K   I    I+  
Sbjct: 1230 VYDMLATGISPDVQGVN-ETPDAKNHRSVKFGA--LLLYDKSVSQGLKKLGISKDRIKKL 1286

Query: 543  ISLNDVQNLSHTWKNILRKYPVNHQLNERDKSTLLVGLERHPRRDEKIGVGVQEIKVGYH 364
              L+D+  LS+    IL KYP+N  L+ +DKSTL++ L  HPR DEKIG G Q+IKV YH
Sbjct: 1287 FKLDDIWILSNALAKILNKYPINQSLDHKDKSTLMIALYFHPRIDEKIGTGFQDIKVAYH 1346

Query: 363  PKHPTSTCFFVVRTDGTIEDFSYHKCVIGWLELIAPRKVKSYESKLQKM*QNNVR 199
            PKH +S CF +VR DGT+EDFSY KCV+G LE+I P+  + Y+S ++    + VR
Sbjct: 1347 PKHQSSRCFVLVRADGTVEDFSYRKCVLGALEIIDPQAAEIYKSNMRYDGNDQVR 1401


>ref|XP_007158453.1| hypothetical protein PHAVU_002G153700g [Phaseolus vulgaris]
            gi|561031868|gb|ESW30447.1| hypothetical protein
            PHAVU_002G153700g [Phaseolus vulgaris]
          Length = 1463

 Score =  934 bits (2415), Expect = 0.0
 Identities = 492/912 (53%), Positives = 643/912 (70%), Gaps = 14/912 (1%)
 Frame = -3

Query: 2859 STWLRETDGNLFCSLVKHNQDLVLDYLYAAQEVLCEWLSMRGLTVXXXXXXXXXXXXSRK 2680
            S WLR++D N+F  LV+H Q   L++L+AAQ VLCEWLSM G +V            +RK
Sbjct: 572  SGWLRDSDCNVFQGLVEHFQGKSLNFLFAAQNVLCEWLSMTGFSVSLSDLYLSSDSYARK 631

Query: 2679 NMIDEVHCGLLEAEQTCLFKQLLVDSNHDFLVEMGEENQNAMTLEVDQLCYEKQKSAALT 2500
            NMI+E+  GL +AE+ C FKQLL+D   DFL    EE++N+MT++ D L YE+Q SAAL+
Sbjct: 632  NMIEEICYGLQDAEKACNFKQLLLDCYCDFLSGNHEESENSMTVDADSLNYERQISAALS 691

Query: 2499 QGSVYAFKQVFRDIQNLTYRYASWNNSLLAMVKAGSKGNLLKLVQQGLCLGLQHSLVPLS 2320
            Q SV AF+ VFR+IQ+L  +YA  +N+ LAM KAGSK +L++L Q  +CLG+Q+SLV LS
Sbjct: 692  QASVDAFRHVFRNIQSLADKYACTDNTFLAMNKAGSKSSLVRLAQHSMCLGMQNSLVRLS 751

Query: 2319 FSLPRQLSCAAWNNQKASNRSQMTWGS----QSYIPYAVVENSYITGLNPLETFVHSITG 2152
            + LPR LSCAAWN+QK  +  Q+  G+    QSYIP AVV++S++TGLNPLE FVHS+T 
Sbjct: 752  YRLPRHLSCAAWNSQKGLDSIQIYSGTLESVQSYIPCAVVKSSFLTGLNPLECFVHSVTI 811

Query: 2151 RESSFSNHAELPGTLTRKLNFFMRDLYITYDGTVRNAYGNQLVQFSYNIEKDTSSSSGMH 1972
            R S FS +A++PGTLTR+L FFMRDL+  YDGTVRN YGNQL+QFSY+I+++TS      
Sbjct: 812  RASGFSENADVPGTLTRRLMFFMRDLFAAYDGTVRNLYGNQLIQFSYDIDENTSC----- 866

Query: 1971 GFSGENSYACGAMGGQSVGSLAACAISEASYSALDQPISLLEISPLLNLKNVLECGLPKS 1792
                + S+   A+GG+ VG+L+A A+SEA YSALDQP+SLLE SPLLNLKNVLECG  K 
Sbjct: 867  ----DKSFKEYAIGGEPVGALSASAVSEAGYSALDQPVSLLEASPLLNLKNVLECGSRKK 922

Query: 1791 TADQTMSLFLSEKLGRQRHGFEYGALEVKNHLERLLFSDIVSTVMIIFSPQTCSQTH-FS 1615
              DQ++SLF SEK+G+QRHGFEY ALEVKN+LERLLFS IVSTVMIIF+P   S    +S
Sbjct: 923  NGDQSVSLFFSEKVGKQRHGFEYAALEVKNYLERLLFSKIVSTVMIIFTPPDSSSLEKYS 982

Query: 1614 PWVCHFHVCKEIVKRRKLKVHSIIDSLYMKCNMARVESKVNLPTLQITSKECSMDEMQKE 1435
            PWVCHFH+ KEI+ RRKLKVHSIID LY +      E KV    L+I+SK+CS+D   KE
Sbjct: 983  PWVCHFHLDKEILMRRKLKVHSIIDYLYQRYYSQSTEPKVGFTKLKISSKKCSVDSTAKE 1042

Query: 1434 NNDMI--------CITVTFENLKNSCLQWETARDLVIPFFLGTVIKGFSVIKKVDILWND 1279
              D+         CITVT      + +Q  + RDL+IPFFLGT IKGF  IKKVDILWN+
Sbjct: 1043 GEDICIDKEDSDDCITVTIVENSENPIQLNSVRDLMIPFFLGTTIKGFMDIKKVDILWNN 1102

Query: 1278 R-RGVQKSTGLFGELYLKVFMSADCSRTKIWNALVNNCIQIMDMIDWKRSHPDNINTMFA 1102
            + +G     G  GELYL+V +++  +  + W  LVN+C +IM +IDW RSHPDNIN + +
Sbjct: 1103 QSKGTNSYNGSSGELYLRVTVASSGNTGRFWGVLVNHCHKIMQIIDWPRSHPDNINYLSS 1162

Query: 1101 AYGIDIAWTFFVKNLKSAISDIGKTILPEHLLLFANHLSSTGEFVGLNAKGMAHQKEQTS 922
            AYGID+AW ++ K+L SAISD GK+ILP+HL L AN +S++GEFVGLNAKGMA Q++  S
Sbjct: 1163 AYGIDVAWQYYYKSLASAISDTGKSILPKHLRLLANSMSASGEFVGLNAKGMAQQRQHAS 1222

Query: 921  VSSPLMQACFSNPSACFIKAAKSAVVDNLQGSLDALAWGSTPSLGTAGPFELVYSEKGYE 742
            VSSP +QACFSNP   FIKAAKS + DNLQGSLDALAWG+ PS+GT+G F+++YSEKG+E
Sbjct: 1223 VSSPFVQACFSNPGRSFIKAAKSELTDNLQGSLDALAWGNCPSMGTSGLFDIIYSEKGHE 1282

Query: 741  LAKPLDVYSLLGSQISSQEQIVEFDIPNSCSRMLDKCGVKPLYTYGDSPLKGRKNYEIFL 562
            + K +DVY LL +        + F   N+ S    KCG +  +  G +  +G++    + 
Sbjct: 1283 VDKAVDVYKLLEASFDKPNNKIGFHAHNNSS---GKCGSEFRHKNGYAFKEGKQ----WK 1335

Query: 561  KAIRNYISLNDVQNLSHTWKNILRKYPVNHQLNERDKSTLLVGLERHPRRDEKIGVGVQE 382
              +RN++++ND+Q L+   + IL KY ++  L+E D+ST+L  L  HPRR EK+G+G Q+
Sbjct: 1336 NILRNFVTVNDIQKLTTASRCILNKYEIDELLSEFDRSTILRVLNFHPRRSEKLGIGPQD 1395

Query: 381  IKVGYHPKHPTSTCFFVVRTDGTIEDFSYHKCVIGWLELIAPRKVKSYESKLQKM*QNNV 202
            IKVG+HPK   S CF +VRTDGT+EDFSY KC++  LE++ P+      SK+QK      
Sbjct: 1396 IKVGWHPKFKDSRCFHIVRTDGTVEDFSYRKCILRALEVVDPKM-----SKIQK------ 1444

Query: 201  REKKWDWEVDTQ 166
              KKW    D Q
Sbjct: 1445 --KKWSARDDAQ 1454


>ref|XP_007158454.1| hypothetical protein PHAVU_002G153700g [Phaseolus vulgaris]
            gi|561031869|gb|ESW30448.1| hypothetical protein
            PHAVU_002G153700g [Phaseolus vulgaris]
          Length = 1464

 Score =  929 bits (2400), Expect = 0.0
 Identities = 491/913 (53%), Positives = 643/913 (70%), Gaps = 15/913 (1%)
 Frame = -3

Query: 2859 STWLRETDGNLFCSLVKHNQDLVLDYLYAAQEVLCEWLSMRGLTVXXXXXXXXXXXXSRK 2680
            S WLR++D N+F  LV+H Q   L++L+AAQ VLCEWLSM G +V            +RK
Sbjct: 572  SGWLRDSDCNVFQGLVEHFQGKSLNFLFAAQNVLCEWLSMTGFSVSLSDLYLSSDSYARK 631

Query: 2679 NMIDEVHCGLLEAEQTCLFKQLLVDSNHDFLVEMGEENQNAMTLEVDQLCYEKQKSAALT 2500
            NMI+E+  GL +AE+ C FKQLL+D   DFL    EE++N+MT++ D L YE+Q SAAL+
Sbjct: 632  NMIEEICYGLQDAEKACNFKQLLLDCYCDFLSGNHEESENSMTVDADSLNYERQISAALS 691

Query: 2499 QGSVYAFKQVFRDIQNLTYRYASWNNSLLAMVKAGSKGNLLKLVQQGLCLGLQHSLVPLS 2320
            Q SV AF+ VFR+IQ+L  +YA  +N+ LAM KAGSK +L++L Q  +CLG+Q+SLV LS
Sbjct: 692  QASVDAFRHVFRNIQSLADKYACTDNTFLAMNKAGSKSSLVRLAQHSMCLGMQNSLVRLS 751

Query: 2319 FSLPRQLSCAAWNNQKASNRSQMTWGS----QSYIPYAVVENSYITGLNPLETFVHSITG 2152
            + LPR LSCAAWN+QK  +  Q+  G+    QSYIP AVV++S++TGLNPLE FVHS+T 
Sbjct: 752  YRLPRHLSCAAWNSQKGLDSIQIYSGTLESVQSYIPCAVVKSSFLTGLNPLECFVHSVTI 811

Query: 2151 RESSFSNHAELPGTLTRKLNFFMRDLYITYDGTVRNAYGNQLVQFSYNIEKDTSSSSGMH 1972
            R S FS +A++PGTLTR+L FFMRDL+  YDGTVRN YGNQL+QFSY+I+++TS      
Sbjct: 812  RASGFSENADVPGTLTRRLMFFMRDLFAAYDGTVRNLYGNQLIQFSYDIDENTSC----- 866

Query: 1971 GFSGENSYACGAMGGQSVGSLAACAISEASYSALDQPISLLEISPLLNLKNVLECGLPKS 1792
                + S+   A+GG+ VG+L+A A+SEA YSALDQP+SLLE SPLLNLKNVLECG  K 
Sbjct: 867  ----DKSFKEYAIGGEPVGALSASAVSEAGYSALDQPVSLLEASPLLNLKNVLECGSRKK 922

Query: 1791 TADQTMSLFLSEKLGRQRHGFEYGALEVKNHLERLLFSDIVSTVMIIFSPQTCSQTH-FS 1615
              DQ++SLF SEK+G+QRHGFEY ALEVKN+LERLLFS IVSTVMIIF+P   S    +S
Sbjct: 923  NGDQSVSLFFSEKVGKQRHGFEYAALEVKNYLERLLFSKIVSTVMIIFTPPDSSSLEKYS 982

Query: 1614 PWVCHFHVCKEIVKRRKLKVHSIIDSLYMKCNMARVESKVNLPTLQITS-KECSMDEMQK 1438
            PWVCHFH+ KEI+ RRKLKVHSIID LY +      E KV    L+I+S ++CS+D   K
Sbjct: 983  PWVCHFHLDKEILMRRKLKVHSIIDYLYQRYYSQSTEPKVGFTKLKISSNRKCSVDSTAK 1042

Query: 1437 ENNDMI--------CITVTFENLKNSCLQWETARDLVIPFFLGTVIKGFSVIKKVDILWN 1282
            E  D+         CITVT      + +Q  + RDL+IPFFLGT IKGF  IKKVDILWN
Sbjct: 1043 EGEDICIDKEDSDDCITVTIVENSENPIQLNSVRDLMIPFFLGTTIKGFMDIKKVDILWN 1102

Query: 1281 DR-RGVQKSTGLFGELYLKVFMSADCSRTKIWNALVNNCIQIMDMIDWKRSHPDNINTMF 1105
            ++ +G     G  GELYL+V +++  +  + W  LVN+C +IM +IDW RSHPDNIN + 
Sbjct: 1103 NQSKGTNSYNGSSGELYLRVTVASSGNTGRFWGVLVNHCHKIMQIIDWPRSHPDNINYLS 1162

Query: 1104 AAYGIDIAWTFFVKNLKSAISDIGKTILPEHLLLFANHLSSTGEFVGLNAKGMAHQKEQT 925
            +AYGID+AW ++ K+L SAISD GK+ILP+HL L AN +S++GEFVGLNAKGMA Q++  
Sbjct: 1163 SAYGIDVAWQYYYKSLASAISDTGKSILPKHLRLLANSMSASGEFVGLNAKGMAQQRQHA 1222

Query: 924  SVSSPLMQACFSNPSACFIKAAKSAVVDNLQGSLDALAWGSTPSLGTAGPFELVYSEKGY 745
            SVSSP +QACFSNP   FIKAAKS + DNLQGSLDALAWG+ PS+GT+G F+++YSEKG+
Sbjct: 1223 SVSSPFVQACFSNPGRSFIKAAKSELTDNLQGSLDALAWGNCPSMGTSGLFDIIYSEKGH 1282

Query: 744  ELAKPLDVYSLLGSQISSQEQIVEFDIPNSCSRMLDKCGVKPLYTYGDSPLKGRKNYEIF 565
            E+ K +DVY LL +        + F   N+ S    KCG +  +  G +  +G++    +
Sbjct: 1283 EVDKAVDVYKLLEASFDKPNNKIGFHAHNNSS---GKCGSEFRHKNGYAFKEGKQ----W 1335

Query: 564  LKAIRNYISLNDVQNLSHTWKNILRKYPVNHQLNERDKSTLLVGLERHPRRDEKIGVGVQ 385
               +RN++++ND+Q L+   + IL KY ++  L+E D+ST+L  L  HPRR EK+G+G Q
Sbjct: 1336 KNILRNFVTVNDIQKLTTASRCILNKYEIDELLSEFDRSTILRVLNFHPRRSEKLGIGPQ 1395

Query: 384  EIKVGYHPKHPTSTCFFVVRTDGTIEDFSYHKCVIGWLELIAPRKVKSYESKLQKM*QNN 205
            +IKVG+HPK   S CF +VRTDGT+EDFSY KC++  LE++ P+      SK+QK     
Sbjct: 1396 DIKVGWHPKFKDSRCFHIVRTDGTVEDFSYRKCILRALEVVDPKM-----SKIQK----- 1445

Query: 204  VREKKWDWEVDTQ 166
               KKW    D Q
Sbjct: 1446 ---KKWSARDDAQ 1455


>ref|XP_004298730.1| PREDICTED: DNA-directed RNA polymerase D subunit 1-like [Fragaria
            vesca subsp. vesca]
          Length = 1438

 Score =  912 bits (2358), Expect = 0.0
 Identities = 486/885 (54%), Positives = 615/885 (69%), Gaps = 8/885 (0%)
 Frame = -3

Query: 2868 SRESTWLRETDGNLFCSLVKHNQDLVLDYLYAAQEVLCEWLSMRGLTVXXXXXXXXXXXX 2689
            S  S+WLR+T GNLF SL +H    VLD  ++AQ VLCEWLSMRGL+V            
Sbjct: 566  SEGSSWLRDTSGNLFQSLTEHCHGQVLDIFFSAQGVLCEWLSMRGLSVSLSDLYLASDTC 625

Query: 2688 SRKNMIDEVHCGLLEAEQTCLFKQLLVDSNHDFLVEMGE-ENQNAMTLEVDQLCYEKQKS 2512
            SRKN+++E+  GL EAE+ C  +QL++DS  DFL+   E ++Q+ +T   +  CY+KQK+
Sbjct: 626  SRKNLMEEIFYGLQEAEEACTIRQLMLDSFQDFLMGYDENKSQSPLTFGSEHFCYQKQKT 685

Query: 2511 AALTQGSVYAFKQVFRDIQNLTYRYASWNNSLLAMVKAGSKGNLLKLVQQGLCLGLQHSL 2332
            AAL+Q +V A K+ FRD+QNL Y+YA  +NSLLAM KAGSKGN+LKLVQ  +CLGLQHSL
Sbjct: 686  AALSQVTVDAIKEGFRDVQNLAYKYAGVDNSLLAMFKAGSKGNMLKLVQHCMCLGLQHSL 745

Query: 2331 VPLSFSLPRQLSCAAWNNQKASNRSQMTWGS----QSYIPYAVVENSYITGLNPLETFVH 2164
            VPLSF  P QLSC AWN+QKA    Q    +    +SYIP AVV++S++TGLNP+E FVH
Sbjct: 746  VPLSFKFPNQLSCDAWNDQKARGIVQEVGRNFESIESYIPSAVVKSSFLTGLNPVECFVH 805

Query: 2163 SITGRESSFSNHAELPGTLTRKLNFFMRDLYITYDGTVRNAYGNQLVQFSYNIEKDTSSS 1984
            S+T R+ SFSN+AELPGTL RKL +FMRDL+  YDGTVRNAYGNQL+QFSY+I++  S++
Sbjct: 806  SVTSRDGSFSNNAELPGTLNRKLMYFMRDLHTAYDGTVRNAYGNQLIQFSYDIDEGISTA 865

Query: 1983 SGMHGFSGENSYA-CGAMGGQSVGSLAACAISEASYSALDQPISLLEISPLLNLKNVLEC 1807
                  S   S   CG  G Q VG+L+ACAISEA+YSALDQP+SLLE SPLLNLKN+LEC
Sbjct: 866  DSTTNSSYAKSVINCG--GSQPVGALSACAISEAAYSALDQPVSLLEASPLLNLKNILEC 923

Query: 1806 GLPKSTADQTMSLFLSEKLGRQRHGFEYGALEVKNHLERLLFSDIVSTVMIIFSPQTCSQ 1627
            G  +S+A QTMSLFLS+KL R RHGFEYGALEVKNHLE L FSDIVSTVMI+FS Q+ S+
Sbjct: 924  GSKRSSAKQTMSLFLSDKLDRHRHGFEYGALEVKNHLEGLNFSDIVSTVMIMFSSQSGSK 983

Query: 1626 THFSPWVCHFHVCKEIVKRRKLKVHSIIDSLYMKCNMARVESKVNLPTLQITSKECSMDE 1447
              FSPWV HFH+ KEIV+RR+L V SII++LY  CN A  + K+      I  +EC   +
Sbjct: 984  MRFSPWVSHFHISKEIVRRRRLNVQSIIEALYAMCNSAGADLKI-----MIIGREC---D 1035

Query: 1446 MQKENNDMICITVTF-ENLKNSCLQWETARDLVIPFFLGTVIKGFSVIKKVDILWNDRRG 1270
                 ND  CI+VT  E   NS  + +  R LVIPF L TV+KGF  IKKVDILW DR G
Sbjct: 1036 CCSTPNDTFCISVTLTEKYNNSSKELDKTRVLVIPFLLKTVVKGFLEIKKVDILWIDRPG 1095

Query: 1269 VQKSTGLFGELYLKVFMSADCSR-TKIWNALVNNCIQIMDMIDWKRSHPDNINTMFAAYG 1093
                    GEL L+V MS    + T +WN L+++CI +MDMIDW RSHPDN++ +  AYG
Sbjct: 1096 SS------GELCLRVSMSGKTRKGTTLWNMLMDDCIPVMDMIDWSRSHPDNVHDICTAYG 1149

Query: 1092 IDIAWTFFVKNLKSAISDIGKTILPEHLLLFANHLSSTGEFVGLNAKGMAHQKEQTSVSS 913
            ID+    F+  L+SA  D+GKTILP+HLLL A+ LS+TGEFV LNAKG+  Q E  SV +
Sbjct: 1150 IDVGQKHFLNKLESATKDVGKTILPQHLLLVADCLSATGEFVSLNAKGIGQQLEHASVIA 1209

Query: 912  PLMQACFSNPSACFIKAAKSAVVDNLQGSLDALAWGSTPSLGTAGPFELVYSEKGYELAK 733
            P MQACFS P  C +KAAK  VVDNLQGSLDAL WG+TPSLG+ G F++++S KG   +K
Sbjct: 1210 PFMQACFSTPGPCLVKAAKVGVVDNLQGSLDALTWGNTPSLGSGGQFDIIFS-KGPVSSK 1268

Query: 732  PLDVYSLLGSQISSQEQIVEFDIPNSCSRMLDKCGVKPLYTYGDSPLKGRKNYEIFLKAI 553
            P+ VY LL SQI +  Q   F++ ++   + DK     +Y  G      RK   I    +
Sbjct: 1269 PIKVYDLLSSQIITNPQ-NGFEMSDAPIHLSDKFVAPNMYKNGYL----RKWESITKSVL 1323

Query: 552  RNYISLNDVQNLSHTWKNILRKYPVNHQLNERDKSTLLVGLERHPRRDEKIGVGVQEIKV 373
            R  +++ D+  LS   KNIL+KY VN ++N+ DK  L++ L  HP  D KIG+G++E+KV
Sbjct: 1324 RENLTIQDIDRLSQALKNILQKYDVNERINDMDKQVLMMVLRFHPHGDRKIGLGIKEVKV 1383

Query: 372  GYHPKHPTSTCFFVVRTDGTIEDFSYHKCVIGWLELIAPRKVKSY 238
            G+HP H    CF +VRTDGTIED SYHKC+ G  ++IAP + K Y
Sbjct: 1384 GHHPDHENVRCFMLVRTDGTIEDVSYHKCICGAYDIIAPHRAKGY 1428


>ref|XP_003611164.1| DNA-directed RNA polymerase subunit beta [Medicago truncatula]
            gi|355512499|gb|AES94122.1| DNA-directed RNA polymerase
            subunit beta [Medicago truncatula]
          Length = 1687

 Score =  912 bits (2357), Expect = 0.0
 Identities = 492/929 (52%), Positives = 635/929 (68%), Gaps = 28/929 (3%)
 Frame = -3

Query: 2868 SRESTWLRETDGNLFCSLVKHNQDLVLDYLYAAQEVLCEWLSMRGLTVXXXXXXXXXXXX 2689
            S  S WLR+++ N+F SLV+H Q  +LD L+ AQ+ LCEWLSM G +V            
Sbjct: 739  SESSGWLRDSENNVFQSLVEHFQGKILDVLHGAQKALCEWLSMTGFSVSLSDLYLSSDSY 798

Query: 2688 SRKNMIDEVHCGLLEAEQTCLFKQLLVDSNHDFLVEMGEENQNAMTLEVDQLCYEKQKSA 2509
            +RKNM++E+  GL  AEQ C F QLLVD   DFL    EEN+  +T++VD+L +E+Q SA
Sbjct: 799  ARKNMMEEISYGLRVAEQACDFNQLLVDHYSDFLSASPEENEKFVTVDVDRLNHERQISA 858

Query: 2508 ALTQGSVYAFKQVFRDIQNLTYRYASWNNSLLAMVKAGSKGNLLKLVQQGLCLGLQHSLV 2329
            A +Q SV AF+ VFR+IQ+L  ++A  +NS LAM KAGSKGNLLKLVQ  +CLGLQHSLV
Sbjct: 859  AQSQASVDAFRHVFRNIQSLADKHACKDNSFLAMFKAGSKGNLLKLVQHSMCLGLQHSLV 918

Query: 2328 PLSFSLPRQLSCAAWNNQKASNRSQMTWGS----QSYIPYAVVENSYITGLNPLETFVHS 2161
             LS+ +PR+LSCA WN+QK  +  +M+  +    QSYI +AVVE+S++TGLNPLE FVHS
Sbjct: 919  RLSYRIPRELSCAGWNSQKGLHSMEMSSDTLEPKQSYIAHAVVESSFLTGLNPLECFVHS 978

Query: 2160 ITGRESSFSNHAELPGTLTRKLNFFMRDLYITYDGTVRNAYGNQLVQFSYNIEKDTSSSS 1981
            +T R+SSFS++A+LPGTLTR+L FFMRD+Y  YDGTVRN YGNQL+QFSY+ E+D+S  S
Sbjct: 979  VTNRDSSFSDNADLPGTLTRRLMFFMRDMYDAYDGTVRNLYGNQLIQFSYDAEEDSSCDS 1038

Query: 1980 GMHGFSGENSYACGAMGGQSVGSLAACAISEASYSALDQPISLLEISPLLNLKNVLECGL 1801
                      +    +GG+ VG+L+ACA+SEA+YSAL QPISLLE SPLLNLKNVLECG 
Sbjct: 1039 ---------YFREDIIGGEPVGALSACAVSEAAYSALSQPISLLEASPLLNLKNVLECGS 1089

Query: 1800 PKSTADQTMSLFLSEKLGRQRHGFEYGALEVKNHLERLLFSDIVSTVMIIFSPQTCSQTH 1621
             K   DQT+SLFLSEK+G+QR+GFEY ALEVKN+LER +FS+IVSTVMIIF+PQ CSQ  
Sbjct: 1090 RKKGGDQTVSLFLSEKIGKQRNGFEYAALEVKNYLERYMFSNIVSTVMIIFTPQHCSQVK 1149

Query: 1620 FSPWVCHFHVCKEIVKRRKLKVHSIIDSLYMKCNMARVESKVNLPTLQITSKE------- 1462
            +SPWVCHFH+ KE V RRKL+VHSIIDSLY + +  R ESKV LP+L+I+SK        
Sbjct: 1150 YSPWVCHFHLDKENVTRRKLEVHSIIDSLYQQYDSFRRESKVILPSLKISSKSGREVENK 1209

Query: 1461 ----CSMDEMQK-----------ENNDMICITV-TFENLKNSCLQWETARDLVIPFFLGT 1330
                CS  +  K           E +   CITV   E+ KNS +Q ++ R  +IPF L T
Sbjct: 1210 EGQTCSKCQDYKANEGGETSVGNEKDGEDCITVAVVEDSKNS-VQLDSVRKSLIPFLLQT 1268

Query: 1329 VIKGFSVIKKVDILWNDRRGVQKS-TGLFGELYLKVFMSADCSRTKIWNALVNNCIQIMD 1153
             IKGF  IKKVDILW D   V KS  G  GELYL+V MS+       W  L+N+C +IM 
Sbjct: 1269 AIKGFLEIKKVDILWKDLPKVTKSYNGSAGELYLRVTMSSGNDNGTFWGRLINHCHRIMP 1328

Query: 1152 MIDWKRSHPDNINTMFAAYGIDIAWTFFVKNLKSAISDIGKTILPEHLLLFANHLSSTGE 973
            +IDW RSHPDNI+   +A+GID  W  +  NL SA SD GK+ILP+HL L AN LS++GE
Sbjct: 1329 LIDWTRSHPDNIHHFCSAFGIDAGWQHYFHNLSSATSDTGKSILPKHLRLVANSLSASGE 1388

Query: 972  FVGLNAKGMAHQKEQTSVSSPLMQACFSNPSACFIKAAKSAVVDNLQGSLDALAWGSTPS 793
            FVGLNAKGMA Q++  SVSSP +QACFSNP + F+KAAKS +VDNLQG+LDALAWG+   
Sbjct: 1389 FVGLNAKGMARQRKHASVSSPFVQACFSNPGSSFLKAAKSGIVDNLQGNLDALAWGNCLP 1448

Query: 792  LGTAGPFELVYSEKGYELAKPLDVYSLLGSQISSQEQIVEFDIPNSCSRMLDKCGVKPLY 613
            +GT G F+++YSEK  E+ K +DVY LL +  +  +Q  E +IP S      KC      
Sbjct: 1449 MGTGGQFDIIYSEKVEEINKSVDVYGLLETSFNQMDQ--EINIPQSRKYSSGKCSSDFRS 1506

Query: 612  TYGDSPLKGRKNYEIFLKAIRNYISLNDVQNLSHTWKNILRKYPVNHQLNERDKSTLLVG 433
              G    K  K ++     +RN+++ ND+Q L+   + IL KY ++  L+E DK T++  
Sbjct: 1507 KNGGYTPKEPKQWK---SVLRNFMTANDIQRLTFDARVILNKYQIDETLSETDKLTIMKV 1563

Query: 432  LERHPRRDEKIGVGVQEIKVGYHPKHPTSTCFFVVRTDGTIEDFSYHKCVIGWLELIAPR 253
            L  HPRRDEK G G Q IKVG+HP+   S CFF++R DG++EDFSY KC++G L++I P+
Sbjct: 1564 LHFHPRRDEKFGSGPQNIKVGWHPEFTDSRCFFIIRKDGSVEDFSYRKCILGALDIIDPK 1623

Query: 252  KVKSYESKLQKM*QNNVREKKWDWEVDTQ 166
            K K   ++       ++  KKW    D +
Sbjct: 1624 KSKIQRNRWSG--NGDMEAKKWSGNGDME 1650