BLASTX nr result
ID: Paeonia25_contig00005149
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Paeonia25_contig00005149
(3323 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAG31376.1| topoisomerase I [Camptotheca acuminata] 1074 0.0
ref|XP_007020664.1| DNA topoisomerase I alpha isoform 1 [Theobro... 1064 0.0
dbj|BAG31377.1| topoisomerase I [Catharanthus roseus] 1040 0.0
ref|XP_002300344.1| DNA topoisomerase family protein [Populus tr... 1013 0.0
ref|XP_006474977.1| PREDICTED: DNA topoisomerase 1-like isoform ... 1009 0.0
ref|XP_006452479.1| hypothetical protein CICLE_v10007398mg [Citr... 1004 0.0
dbj|BAG31375.1| topoisomerase I [Ophiorrhiza japonica] 1004 0.0
dbj|BAK32960.1| topoisomerase I [Ophiorrhiza pseudofasciculata] 1003 0.0
dbj|BAK32958.1| topoisomerase I [Ophiorrhiza pedunculata] 996 0.0
dbj|BAK32962.1| topoisomerase I [Ophiorrhiza trichocarpon var. g... 996 0.0
ref|XP_002529020.1| DNA topoisomerase type I, putative [Ricinus ... 994 0.0
ref|XP_004149585.1| PREDICTED: DNA topoisomerase 1-like [Cucumis... 992 0.0
ref|XP_002317355.1| DNA topoisomerase family protein [Populus tr... 991 0.0
gb|EYU30724.1| hypothetical protein MIMGU_mgv1a001121mg [Mimulus... 990 0.0
dbj|BAG31374.1| topoisomerase I [Ophiorrhiza liukiuensis] 986 0.0
dbj|BAG31373.1| topoisomerase I [Ophiorrhiza pumila] 984 0.0
ref|XP_006364175.1| PREDICTED: LOW QUALITY PROTEIN: DNA topoisom... 982 0.0
dbj|BAK32956.1| topoisomerase I [Ophiorrhiza fucosa] 981 0.0
ref|XP_002266885.1| PREDICTED: DNA topoisomerase 1 [Vitis vinife... 980 0.0
ref|XP_002265386.1| PREDICTED: DNA topoisomerase 1-like [Vitis v... 978 0.0
>dbj|BAG31376.1| topoisomerase I [Camptotheca acuminata]
Length = 894
Score = 1074 bits (2777), Expect = 0.0
Identities = 590/955 (61%), Positives = 663/955 (69%), Gaps = 7/955 (0%)
Frame = -2
Query: 3085 MAVQACVQSNMLD--DDDDEPLVFKRSTA-SKQNQLNSEIKKSLPPKNAGSSGRQVPDVQ 2915
MAVQACV+ M+D D+DDEPLVFKRS A SK NQLNS+ KKS + G SGRQV DV
Sbjct: 1 MAVQACVKEKMMDEIDEDDEPLVFKRSNATSKHNQLNSDTKKS-SQRYDGQSGRQVSDVP 59
Query: 2914 SPNGQRSSSQKGKTVPSAKPSGVKPSMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 2735
S NGQ SS+ KGKT +
Sbjct: 60 STNGQSSSASKGKTTKLSS----------------------------------------- 78
Query: 2734 XXXXXXSGVKSSTASPEVSSLSANASPVKSSLANSKGLPSSANQLNHSSKQNS-SIVKEE 2558
+KS ASP+ S+ A ASPV AN K SS ++ HSSKQN+ ++VKEE
Sbjct: 79 --------MKSPIASPKASTSFAKASPV----ANPKVSSSSDDRSKHSSKQNTINVVKEE 126
Query: 2557 KHSVKHXXXXXXXXXXXXXXXPLSVRISAGLSKGSNNHANKGLSTNNPHPSQSQKPNINI 2378
K V PLS R+ GL+KGS+N+ANKGL ++P KP IN
Sbjct: 127 KELVN---PAAEPYGDSEDEKPLSARLFTGLTKGSSNNANKGLINSSPASLPVPKPEINR 183
Query: 2377 KNEESDDDDEMPLSSRFXXXXXXXXXXXXXXS-DEKKPMASKLQQNGSTMRDDQRKSPPV 2201
+++SDD E+PLSS+F D+ K + S QQNGS R KS
Sbjct: 184 YSDDSDD--EIPLSSKFRLKANAGTSTVKSYESDDNKTLVSNFQQNGSINRGS--KSSIK 239
Query: 2200 FNKRPLDXXXXXXXXXXXXXKLSGASQPIKNNQVSIKAEPKAED--DDHVPIAQRIKKSA 2027
NKRPL KLS AS P+ N Q S KAEPKA+D DDHVPI+QR+KKSA
Sbjct: 240 VNKRPLGEVKSSVQSSVKKPKLSDASTPVNNKQASKKAEPKADDSDDDHVPISQRMKKSA 299
Query: 2026 SSDGKSLSANQKAPXXXXXXXXXXXXXXXXXXXXXXXXXXXKMQPSSGEGQKWTTLVHNG 1847
+S KS +A QK K+ PSSGEG+KW TLVHNG
Sbjct: 300 TSGNKSSTAKQKVTKVVSSSMKKASKKFKKVVKKSKYSKSSKVPPSSGEGKKWNTLVHNG 359
Query: 1846 VIFPPPYKPHGVKMLYKGKPVDLTPEQEEVATMFAVMIDTDYAKKEKFIENFMTDWKKIL 1667
VIFPPPYKPHGVKMLYKGKPVDLTPEQEEVATMFAVM+DTDY K KF ENFM DW+KIL
Sbjct: 360 VIFPPPYKPHGVKMLYKGKPVDLTPEQEEVATMFAVMLDTDYMTKSKFKENFMDDWRKIL 419
Query: 1666 GKNHIIQKFEDCDFRPIYEWHQAXXXXXXXXXXXXXXXXXXXXXXXXXXXMWAVLDGVKE 1487
GKNH+IQ EDCDF PIYEWHQ MWA+++GVKE
Sbjct: 420 GKNHVIQNLEDCDFTPIYEWHQREKEKKKKMTAEEKKVLKEERLKQEEKYMWAIVNGVKE 479
Query: 1486 KVGNFRVEPPGLFRGRGEHPKMGKLKRRIRPSDITINIGKGAPIPECPIPGERWREVRHD 1307
KVGNFRVEPP LFRGRGEHPKMGKLK+ IRPSDITINIGK APIPECPIPGE W+E+RHD
Sbjct: 480 KVGNFRVEPPSLFRGRGEHPKMGKLKKCIRPSDITINIGKDAPIPECPIPGESWKEIRHD 539
Query: 1306 NTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKSRTLKNYIEGIRTAYTRDFT 1127
NTVTWLAFWNDPI P+EFKYVFLAASSSLKGQSDKEKYEK+R LK++I+GIR AYT+DF
Sbjct: 540 NTVTWLAFWNDPIKPREFKYVFLAASSSLKGQSDKEKYEKARLLKDFIQGIRAAYTKDFA 599
Query: 1126 NKDVTKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVTLVPPNKLEFDFLGK 947
+KD+TKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENV PP+ L+FDFLGK
Sbjct: 600 SKDITKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPKPPSILKFDFLGK 659
Query: 946 DSIRXXXXXXXXXXXYKAIGEFQKGKRGSDDLFDELDTSKLNTHLKELMPGLTAKVFRTY 767
DSIR YKAI +F+ GKRG DDLFD+LDTSKLN HLK LMPGLTAKVFRTY
Sbjct: 660 DSIRYQNEVEVELPVYKAIQQFRTGKRGGDDLFDKLDTSKLNAHLKGLMPGLTAKVFRTY 719
Query: 766 NASITLDEMLSRDTKDGDVPEKIVVYNAANKEVAIICNHQRTISKSHAAQMTRLTEKMNE 587
NASITLDEMLSR+TK G+V EKIVVY ANKEVAIICNHQRT+SKSH AQMTRL K++E
Sbjct: 720 NASITLDEMLSRETKGGNVAEKIVVYQHANKEVAIICNHQRTVSKSHPAQMTRLNGKIDE 779
Query: 586 LKGVLEELETDLARARKGKPPLKDADGKQKRNLTPEALERKIAQTNAKIEKTERDMNTKE 407
LKG+L+ L+TDLARA+KGKPPL+DADGK KRNLTPEALERKI QTNAKIEK ERD TKE
Sbjct: 780 LKGILDGLQTDLARAKKGKPPLEDADGKPKRNLTPEALERKIGQTNAKIEKMERDKETKE 839
Query: 406 DLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFSWAMDVDPDFRF 242
LKT+ALGTSKI+YLDPRITVAWCKRHEVPIEK+FNKSLLAKF+W+MDVDP FRF
Sbjct: 840 GLKTIALGTSKISYLDPRITVAWCKRHEVPIEKVFNKSLLAKFAWSMDVDPSFRF 894
>ref|XP_007020664.1| DNA topoisomerase I alpha isoform 1 [Theobroma cacao]
gi|590606147|ref|XP_007020665.1| DNA topoisomerase I
alpha isoform 1 [Theobroma cacao]
gi|508720292|gb|EOY12189.1| DNA topoisomerase I alpha
isoform 1 [Theobroma cacao] gi|508720293|gb|EOY12190.1|
DNA topoisomerase I alpha isoform 1 [Theobroma cacao]
Length = 904
Score = 1064 bits (2751), Expect = 0.0
Identities = 570/941 (60%), Positives = 651/941 (69%), Gaps = 5/941 (0%)
Frame = -2
Query: 3049 DDDDDEPLVFKRS--TASKQNQLNSEIKKSLPPKNAGSSGRQVPDVQSPNGQRSSSQKGK 2876
DDDDD P+VFKR+ ++SKQNQLNSE+KK+ ++ G SGRQV DV+SPNGQ S++ K K
Sbjct: 15 DDDDDGPVVFKRNNTSSSKQNQLNSEVKKASSQRSDGQSGRQVSDVRSPNGQSSNAPKNK 74
Query: 2875 TVPSAKPSGVKPSMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGVKSST 2696
++ S+K V KS
Sbjct: 75 SISSSKSPPV----------------------------------------------KSPI 88
Query: 2695 ASPEVSSLSANASPVKSSLANSKGLPSSANQLNHSSKQN-SSIVKEEKHSVKHXXXXXXX 2519
SP+ S+ S A PVKS + N K S +Q + KQN ++ VKE + +K
Sbjct: 89 LSPKASTSSTKALPVKSPVVNFKASTSLNDQSKQALKQNMTTAVKEGRSPIKGTTEPNSD 148
Query: 2518 XXXXXXXXPLSVRISAGLSKGSNNHANKGLSTNNPHPSQSQKPNINIKNEESDDDDEMPL 2339
PLS R+ KG +N NKG ST+ P S+ P +K D DDE PL
Sbjct: 149 DDDDDDSLPLSARL-----KGISNQGNKGASTSAPAQSRRLVPKTEVKVSAEDPDDEAPL 203
Query: 2338 SSRFXXXXXXXXXXXXXXS-DEKKPMASKLQQNGSTMRDDQRKSPPVFNKRPLDXXXXXX 2162
S+RF DEKKP+ASK+QQNGS M+ Q+ S + KRPLD
Sbjct: 204 SARFNVKSNTGTSSSRLHDCDEKKPLASKIQQNGSIMKGKQQNSSTLSGKRPLDKGNSSD 263
Query: 2161 XXXXXXXKLSGASQPIKNNQVSIKAEPKAEDDDHVPIAQRIKKSASSDGKSLSANQKAPX 1982
K S A +K QV++KAE EDDDH+PIAQR+KKS +S+ K S QK
Sbjct: 264 HSSAKKPKTSDAPTTMKTKQVTVKAEKADEDDDHMPIAQRMKKSTASNSKLSSMKQKTTK 323
Query: 1981 XXXXXXXXXXXXXXXXXXXXXXXXXXKMQPSSGEGQK-WTTLVHNGVIFPPPYKPHGVKM 1805
K+ PSSG+GQK W+TLVHNGVIFP PY PHGVKM
Sbjct: 324 VVSSSFKKINKKSKKEMKSSKYIKSTKVPPSSGDGQKKWSTLVHNGVIFPSPYTPHGVKM 383
Query: 1804 LYKGKPVDLTPEQEEVATMFAVMIDTDYAKKEKFIENFMTDWKKILGKNHIIQKFEDCDF 1625
LY G+PVDLTPEQEEVATMFAVM DTDY K +F +NF DW K+LGKNH I+ + CDF
Sbjct: 384 LYDGRPVDLTPEQEEVATMFAVMKDTDYMSKTQFKKNFWEDWSKLLGKNHTIKDLDRCDF 443
Query: 1624 RPIYEWHQAXXXXXXXXXXXXXXXXXXXXXXXXXXXMWAVLDGVKEKVGNFRVEPPGLFR 1445
PIYEWH MWA++DGVKEKVGNFRVEPPGLFR
Sbjct: 444 TPIYEWHLQEKEKKKQMSSEEKKALKEEKLKQEEKFMWAIVDGVKEKVGNFRVEPPGLFR 503
Query: 1444 GRGEHPKMGKLKRRIRPSDITINIGKGAPIPECPIPGERWREVRHDNTVTWLAFWNDPIN 1265
GRGEHPKMGKLKRRIRPSDITINIGK APIPECPIPGERW++++HDNTVTWLAFWNDPIN
Sbjct: 504 GRGEHPKMGKLKRRIRPSDITINIGKDAPIPECPIPGERWKDIKHDNTVTWLAFWNDPIN 563
Query: 1264 PKEFKYVFLAASSSLKGQSDKEKYEKSRTLKNYIEGIRTAYTRDFTNKDVTKRQIAVATY 1085
PKEFKYVFLAASSSLKGQSDKEKYEK+R LK+YI+ IR AYT+DFT KDV KRQIAVATY
Sbjct: 564 PKEFKYVFLAASSSLKGQSDKEKYEKARMLKDYIKNIRAAYTKDFTTKDVMKRQIAVATY 623
Query: 1084 LIDKLALRAGNEKDDDEADTVGCCTLKVENVTLVPPNKLEFDFLGKDSIRXXXXXXXXXX 905
LIDKLALRAGNEKDDDEADTVGCCTLKV NV +PPNKL+FDFLGKDSI+
Sbjct: 624 LIDKLALRAGNEKDDDEADTVGCCTLKVGNVECIPPNKLKFDFLGKDSIQYVNTVEVELP 683
Query: 904 XYKAIGEFQKGKRGSDDLFDELDTSKLNTHLKELMPGLTAKVFRTYNASITLDEMLSRDT 725
YKAIG+FQ GK SDDLFD+LDTSKLN HLKELMPGLTAKVFRTYNASITLDEML+++T
Sbjct: 684 VYKAIGQFQTGKSKSDDLFDKLDTSKLNAHLKELMPGLTAKVFRTYNASITLDEMLNKET 743
Query: 724 KDGDVPEKIVVYNAANKEVAIICNHQRTISKSHAAQMTRLTEKMNELKGVLEELETDLAR 545
KDGDV EK+VVY ANKEVAIICNHQR+ISKSH+AQM+RLTEK+ ELKGVL+EL+ DL R
Sbjct: 744 KDGDVAEKVVVYQRANKEVAIICNHQRSISKSHSAQMSRLTEKITELKGVLKELKIDLDR 803
Query: 544 ARKGKPPLKDADGKQKRNLTPEALERKIAQTNAKIEKTERDMNTKEDLKTVALGTSKINY 365
A+KGKPPLKDADGKQKRNLTP+A+++KI QTNAKIEK ERDM TKEDLKTVALGTSKINY
Sbjct: 804 AKKGKPPLKDADGKQKRNLTPQAIQKKIDQTNAKIEKMERDMQTKEDLKTVALGTSKINY 863
Query: 364 LDPRITVAWCKRHEVPIEKIFNKSLLAKFSWAMDVDPDFRF 242
LDPRITVAWCKRHEVPIEKIFNKSLLAKF+WAMDVDPDFRF
Sbjct: 864 LDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMDVDPDFRF 904
>dbj|BAG31377.1| topoisomerase I [Catharanthus roseus]
Length = 910
Score = 1040 bits (2689), Expect = 0.0
Identities = 573/959 (59%), Positives = 653/959 (68%), Gaps = 11/959 (1%)
Frame = -2
Query: 3085 MAVQACVQSNMLDD--DDDEPLVFKRS-TASKQNQLNSEIKKSLPPKNAGSSGRQVPDVQ 2915
MAV+AC N+ DD +DDEP+VFKR+ +ASKQ+Q NSE +K K G S RQ+ D +
Sbjct: 1 MAVEACPTPNLRDDMDEDDEPIVFKRNNSASKQSQTNSETRKVSSQKRDGQSVRQIYDSR 60
Query: 2914 SPNGQRSSSQKGKTVPSAKPSGVKPSMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 2735
NG+ SS QKG+ VP +KPS VK +
Sbjct: 61 PANGESSSGQKGRMVPPSKPSQVKSPLSSPPSKPSQ------------------------ 96
Query: 2734 XXXXXXSGVKSSTASPEVSSLSANASPVKSSLANSKGLPSSANQLNHSSKQNSS-IVKEE 2558
VKS +SP+VS+ SA SPV S ANSK S + ++ ++ S+ ++KEE
Sbjct: 97 --------VKSPLSSPKVSTSSAKKSPVSSLPANSKPSTSGSFKVKPFNQHKSATVIKEE 148
Query: 2557 KHS-VKHXXXXXXXXXXXXXXXPLSVRISAGLSKGSNNHANKGLSTNNPHPSQSQKPNIN 2381
K S ++ PLS+R SA SKG+ N +K + KP
Sbjct: 149 KSSPLRLASAIINDSEDSDDGKPLSLRHSASSSKGNTNQVSK----------EGSKP--- 195
Query: 2380 IKNEESDDDDEMPLSSRFXXXXXXXXXXXXXXS-DEKKPMASKLQQNGSTMRDDQ-RKSP 2207
E D DDE PLSSRF D+ KP+A KLQ NGS MRD Q K
Sbjct: 196 ---ENEDSDDEKPLSSRFPLKSGVGESTSKAYDSDDDKPLAKKLQHNGSAMRDGQPNKYS 252
Query: 2206 PVFNKRPLDXXXXXXXXXXXXXKLSGASQPIKNNQVSIKAEPKAEDDD--HVPIAQRIKK 2033
+ NKRP KLS + P Q S+K EPKAEDDD H+PI+QRIKK
Sbjct: 253 NMSNKRPPGDIKSSNQLSVKKPKLSSVTAPTNKKQASVKPEPKAEDDDDDHLPISQRIKK 312
Query: 2032 SASSDGKSLSANQKAPXXXXXXXXXXXXXXXXXXXXXXXXXXXKMQPSSGEGQKWTTLVH 1853
S +S+ KS S+ +K K+ PSSGEG+KW L H
Sbjct: 313 SPTSESKS-SSIKKTTKVVSSSVKKVNKKSKKVMKNSKYSKSSKVPPSSGEGKKWNKLEH 371
Query: 1852 NGVIFPPPYKPHGVKMLYKGKPVDLTPEQEEVATMFAVMIDTDYAKKEKFIENFMTDWKK 1673
NGVIFPPPYKPHG+KMLYKGKPVDLTPEQEEVATMFAVM+DTDY K +F ENF DWKK
Sbjct: 372 NGVIFPPPYKPHGIKMLYKGKPVDLTPEQEEVATMFAVMLDTDYMNKPRFKENFFGDWKK 431
Query: 1672 ILGKNHIIQKFEDCDFRPIYEWHQAXXXXXXXXXXXXXXXXXXXXXXXXXXXMWAVLDGV 1493
ILGKNH+IQ E+CDF PIYEWHQ+ MWA +DG
Sbjct: 432 ILGKNHVIQNLENCDFSPIYEWHQSEKEKKKQMTTEEKKALKEEKLKQEEKYMWAWVDGK 491
Query: 1492 KEKVGNFRVEPPGLFRGRGEHPKMGKLKRRIRPSDITINIGKGAPIPECPIPGERWREVR 1313
KEKVGNFRVEPPGLFRGRGEHPKMGKLK+RIRP DITINIGK APIPECP+PGERW+EVR
Sbjct: 492 KEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPCDITINIGKDAPIPECPVPGERWKEVR 551
Query: 1312 HDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKSRTLKNYIEGIRTAYTRD 1133
HDNTVTWLAFWNDPINPKEFKYVFLAASS+LKG SDKEKYEK+R LK+YI+GIR AYT+D
Sbjct: 552 HDNTVTWLAFWNDPINPKEFKYVFLAASSTLKGLSDKEKYEKARLLKDYIQGIRAAYTKD 611
Query: 1132 FTNKDVTKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVTLVPPNKLEFDFL 953
F +KD TK+QIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENV VPPN L+FDFL
Sbjct: 612 FASKDPTKKQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPNILKFDFL 671
Query: 952 GKDSIRXXXXXXXXXXXYKAIGEFQKGKRGSDDLFDELDTSKLNTHLKELMPGLTAKVFR 773
GKDSIR +KAI +F+ GK GS DLFD LDTSKLN HLKELMPGLTAKVFR
Sbjct: 672 GKDSIRYQNEVEVEAAVFKAIQQFRSGKEGSSDLFDLLDTSKLNAHLKELMPGLTAKVFR 731
Query: 772 TYNASITLDEMLSRDTKDGDVPEKIVVYNAANKEVAIICNHQRTISKSHAAQMTRLTEKM 593
TYNASITLD+MLSR+TK GDV EK+VVY ANKEVAIICNHQRT+SKSH+AQM RL EK+
Sbjct: 732 TYNASITLDDMLSRETKGGDVAEKVVVYQHANKEVAIICNHQRTVSKSHSAQMLRLNEKI 791
Query: 592 NELKGVLEELETDLARARKGKPPL--KDADGKQKRNLTPEALERKIAQTNAKIEKTERDM 419
ELK V+EEL++DL+R +KGKPPL K+ADGK KRNL PE+LE+KIAQTNAKIEK ERD
Sbjct: 792 EELKAVVEELKSDLSRVKKGKPPLKSKNADGKPKRNLNPESLEKKIAQTNAKIEKMERDK 851
Query: 418 NTKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFSWAMDVDPDFRF 242
TKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKF+WAMDVDP FRF
Sbjct: 852 ETKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFTWAMDVDPSFRF 910
>ref|XP_002300344.1| DNA topoisomerase family protein [Populus trichocarpa]
gi|222847602|gb|EEE85149.1| DNA topoisomerase family
protein [Populus trichocarpa]
Length = 877
Score = 1013 bits (2618), Expect = 0.0
Identities = 561/942 (59%), Positives = 638/942 (67%), Gaps = 6/942 (0%)
Frame = -2
Query: 3049 DDDDDEPLVFKR--STASKQNQLNSEIKKSLPPKNAGSSGRQVPDVQSPNGQRSSSQKGK 2876
DDDDD P+VFKR ++ SKQNQLN E KK P ++ Q+ NGQ + QKGK
Sbjct: 18 DDDDDGPIVFKRGGNSTSKQNQLNPEAKK---PSSSS---------QNSNGQSLNLQKGK 65
Query: 2875 T-VPSAKPSGVKPSMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGVKSS 2699
+ +PS+ S +K SS
Sbjct: 66 SPIPSSNASPMK----------------------------------------------SS 79
Query: 2698 TASPEVSSLSANASPVKSSLANSKGLPSSANQLNHSSKQN-SSIVKEEKHSVKHXXXXXX 2522
T SP+ S+ SA ASP+KS L ++ L SS +QL +SKQ S+ VKEE S+
Sbjct: 80 TGSPKASASSAKASPLKSPLTYTRALTSSNDQLKQASKQVVSNAVKEETKSI-------V 132
Query: 2521 XXXXXXXXXPLSVRISAGLSKGSNNHANKGLSTNNPHPSQSQKPNINIKNEESDDDDEMP 2342
PLS RI KGS N+ NKG++ ++K+E SDDD E+P
Sbjct: 133 DDEDSEDDKPLSSRI-----KGSTNNVNKGVTAP-----------AHVKDEPSDDD-EVP 175
Query: 2341 LSSRFXXXXXXXXXXXXXXSD-EKKPMASKLQQNGSTMRDDQRKSPPVFNKRPLDXXXXX 2165
LSSRF E +P SK Q NGST D Q+KS V KRP+D
Sbjct: 176 LSSRFAMKSNAGTSSSKSIRSSEIRPFPSKSQLNGSTKNDKQQKSSVVPTKRPMDNKVPS 235
Query: 2164 XXXXXXXXKLSGASQPIKNNQVSIKAEPKAEDDDHVPIAQRIKKSASSDGKSLSANQKAP 1985
KL A K QV++K E KA+DDDH+ I+QR+KK+ SS KS A +K
Sbjct: 236 NHSSAKKPKLLDACTTTKVKQVTVKVEQKADDDDHLTISQRMKKADSSANKSSFAKKKVT 295
Query: 1984 XXXXXXXXXXXXXXXXXXXXXXXXXXXKMQPSSGEGQK-WTTLVHNGVIFPPPYKPHGVK 1808
K+QP S +GQK WTTLVHNGVIFPPPYKPHGVK
Sbjct: 296 KVVSSSLKKTTQKNKKQMKNSKYSKSTKVQPGSSDGQKKWTTLVHNGVIFPPPYKPHGVK 355
Query: 1807 MLYKGKPVDLTPEQEEVATMFAVMIDTDYAKKEKFIENFMTDWKKILGKNHIIQKFEDCD 1628
+LYKGKP+DLTPEQEEVATMFAVM DTDY +K +F +NF DW+K+LGKNH+IQK +DCD
Sbjct: 356 ILYKGKPIDLTPEQEEVATMFAVMKDTDYVQKPQFRQNFWNDWRKLLGKNHVIQKLDDCD 415
Query: 1627 FRPIYEWHQAXXXXXXXXXXXXXXXXXXXXXXXXXXXMWAVLDGVKEKVGNFRVEPPGLF 1448
F PIYEWHQ MWA+++GVKEKVGNFRVEPPGLF
Sbjct: 416 FNPIYEWHQQEKEKKKQMSTEEKKVLKEEKLKQEEKYMWAIVNGVKEKVGNFRVEPPGLF 475
Query: 1447 RGRGEHPKMGKLKRRIRPSDITINIGKGAPIPECPIPGERWREVRHDNTVTWLAFWNDPI 1268
RGRGEHPKMGKLK RIRPSDITINIGK APIPECPIPGERW+EV+HDNTVTWLAFWNDPI
Sbjct: 476 RGRGEHPKMGKLKSRIRPSDITINIGKDAPIPECPIPGERWKEVKHDNTVTWLAFWNDPI 535
Query: 1267 NPKEFKYVFLAASSSLKGQSDKEKYEKSRTLKNYIEGIRTAYTRDFTNKDVTKRQIAVAT 1088
NPKEFKYVFLAASSSLKGQSDKEKYEK+R LK+YI IR AYT+DF +KD+TKRQIAVAT
Sbjct: 536 NPKEFKYVFLAASSSLKGQSDKEKYEKARKLKDYIHNIRAAYTKDFASKDITKRQIAVAT 595
Query: 1087 YLIDKLALRAGNEKDDDEADTVGCCTLKVENVTLVPPNKLEFDFLGKDSIRXXXXXXXXX 908
YLIDKLALRAGNEKDDDEADTVGCCTLKV NV +PPNKL+FDFLGKDSIR
Sbjct: 596 YLIDKLALRAGNEKDDDEADTVGCCTLKVANVECIPPNKLKFDFLGKDSIRYENTVEVEL 655
Query: 907 XXYKAIGEFQKGKRGSDDLFDELDTSKLNTHLKELMPGLTAKVFRTYNASITLDEMLSRD 728
YKAIG FQ K+ +DDLFD LDTSKLN HLKELMPGLTAKVFRTYNASITLDE L +
Sbjct: 656 PVYKAIGHFQVAKKQTDDLFDSLDTSKLNAHLKELMPGLTAKVFRTYNASITLDEKLYEE 715
Query: 727 TKDGDVPEKIVVYNAANKEVAIICNHQRTISKSHAAQMTRLTEKMNELKGVLEELETDLA 548
T+DGDV EKIV+YN ANK+VAIICNHQRTISKSH AQM+RLTEK+ ELK L+EL+TDL
Sbjct: 716 TEDGDVAEKIVIYNQANKQVAIICNHQRTISKSHDAQMSRLTEKIEELKSTLKELKTDLD 775
Query: 547 RARKGKPPLKDADGKQKRNLTPEALERKIAQTNAKIEKTERDMNTKEDLKTVALGTSKIN 368
RA+KGKPPLK ADGKQKR+LTPEA+E+KIA TN KIEK E M TKEDLKTVALGTSKIN
Sbjct: 776 RAKKGKPPLKGADGKQKRSLTPEAIEKKIATTNQKIEKMEMAMKTKEDLKTVALGTSKIN 835
Query: 367 YLDPRITVAWCKRHEVPIEKIFNKSLLAKFSWAMDVDPDFRF 242
YLDPRITVAWCKRHEVPI+KIFNKSLLAKF+WAMDVDP FRF
Sbjct: 836 YLDPRITVAWCKRHEVPIDKIFNKSLLAKFTWAMDVDPQFRF 877
>ref|XP_006474977.1| PREDICTED: DNA topoisomerase 1-like isoform X1 [Citrus sinensis]
gi|568842074|ref|XP_006474978.1| PREDICTED: DNA
topoisomerase 1-like isoform X2 [Citrus sinensis]
gi|568842076|ref|XP_006474979.1| PREDICTED: DNA
topoisomerase 1-like isoform X3 [Citrus sinensis]
gi|568842078|ref|XP_006474980.1| PREDICTED: DNA
topoisomerase 1-like isoform X4 [Citrus sinensis]
Length = 902
Score = 1009 bits (2608), Expect = 0.0
Identities = 557/964 (57%), Positives = 655/964 (67%), Gaps = 16/964 (1%)
Frame = -2
Query: 3085 MAVQACVQSNML---DDDDDEPLVFKRSTA-SKQNQLNSEIKKSLPPKNAGSSGRQVPDV 2918
MAV+A + + + DDD+D P VFKR+TA S+QN N E+K+ P
Sbjct: 1 MAVEASSKPSRVYDFDDDEDGPAVFKRNTAASRQNLANPEVKR--------------PSS 46
Query: 2917 QSPNGQRSSSQKGKT-VPSAKPSGVK---PSMXXXXXXXXXXXXXXXXXXXXXXXXXXXX 2750
+ NGQ S++ K KT V S+K VK PS
Sbjct: 47 STANGQNSNAPKDKTTVSSSKVLPVKSPPPSQKAT------------------------- 81
Query: 2749 XXXXXXXXXXXSGVKSSTASPEVSSL-----SANASPVKSSLANSKGLPSSANQLNHSSK 2585
S+ ASP S + S SPVKS +ANSK ++L S +
Sbjct: 82 -------------TSSAKASPSKSPMRSPVKSPVRSPVKSPVANSKESSPLDDRLKQSPQ 128
Query: 2584 QNS-SIVKEEKHSVKHXXXXXXXXXXXXXXXPLSVRISAGLSKGSNNHANKGLSTNNPHP 2408
N+ ++VK+E+ +K PLS R+ KG++ + N+G+ +
Sbjct: 129 HNALAVVKKEE--IKDGNGLKSDDNDSEDDKPLSARL-----KGNSKNVNQGIGASKADA 181
Query: 2407 SQSQKPNINIKNEESDDDDEMPLSSRFXXXXXXXXXXXXXXSDEKKPMASKLQQNGSTMR 2228
+ S+ +N+K + D DDE+PLSSRF SDEKKP+ASK+QQNGST R
Sbjct: 182 AISE---VNVKTDPEDSDDEVPLSSRFPKSNAGTSGAKPIDSDEKKPLASKVQQNGSTSR 238
Query: 2227 DDQRKSPPVFNKRPLDXXXXXXXXXXXXXKLSGASQPIKNNQVSIKAEPKAEDDDHVPIA 2048
+ Q+KS V KRPL K+S S+ +K QV++K E KA+DDDH+PI+
Sbjct: 239 ETQQKSSSVPVKRPLQKASSSGASSAKKPKVSDTSKEVKVKQVTVKVEKKADDDDHIPIS 298
Query: 2047 QRIKKSASSDGKSLSANQKAPXXXXXXXXXXXXXXXXXXXXXXXXXXXKMQPSSGEGQK- 1871
QR+K SA S KS++ KA KM P SG+GQK
Sbjct: 299 QRMKNSAPSVKKSVTNTAKATKSVSSSSNKINKKTKKVIKNSQYSKSTKMLPGSGDGQKK 358
Query: 1870 WTTLVHNGVIFPPPYKPHGVKMLYKGKPVDLTPEQEEVATMFAVMIDTDYAKKEKFIENF 1691
WTTLVHNGVIFPPPY PHGVKMLYKGK V+LTPEQEEVATMFAVM+DTDY +K KF ENF
Sbjct: 359 WTTLVHNGVIFPPPYLPHGVKMLYKGKEVNLTPEQEEVATMFAVMLDTDYMQKPKFRENF 418
Query: 1690 MTDWKKILGKNHIIQKFEDCDFRPIYEWHQAXXXXXXXXXXXXXXXXXXXXXXXXXXXMW 1511
DW+K+LGKNH+IQ E CDF+PIY+WHQ MW
Sbjct: 419 WNDWRKLLGKNHVIQNLEGCDFKPIYDWHQEQKEKKKQMSSEEKKALKEEKLKQEEKYMW 478
Query: 1510 AVLDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKRRIRPSDITINIGKGAPIPECPIPGE 1331
A++DGVKEKVGNFRVEPPGLFRGRGEHPKMGKLK+RI+PSDITINIGK PIPECPIPGE
Sbjct: 479 AIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIQPSDITINIGKDVPIPECPIPGE 538
Query: 1330 RWREVRHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKSRTLKNYIEGIR 1151
W+EV+HDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEK+R LK+YI IR
Sbjct: 539 SWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARKLKDYIHSIR 598
Query: 1150 TAYTRDFTNKDVTKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVTLVPPNK 971
AYT+DF ++D T+RQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKV NV +PPNK
Sbjct: 599 AAYTKDFVSRDGTRRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVGNVECIPPNK 658
Query: 970 LEFDFLGKDSIRXXXXXXXXXXXYKAIGEFQKGKRGSDDLFDELDTSKLNTHLKELMPGL 791
L+FDFLGKDSI+ YKAIG+FQ GK+ +DDLFD+LDT+KLN HLKELMPGL
Sbjct: 659 LKFDFLGKDSIQYVNTVEVELPVYKAIGQFQTGKKQNDDLFDKLDTAKLNAHLKELMPGL 718
Query: 790 TAKVFRTYNASITLDEMLSRDTKDGDVPEKIVVYNAANKEVAIICNHQRTISKSHAAQMT 611
TAKVFRTYNASITLD ML++ T DGDV KI VY ANKEVAIICNHQRT+SK+H+AQM+
Sbjct: 719 TAKVFRTYNASITLDGMLNKGTGDGDVAVKIDVYQRANKEVAIICNHQRTVSKTHSAQMS 778
Query: 610 RLTEKMNELKGVLEELETDLARARKGKPPL-KDADGKQKRNLTPEALERKIAQTNAKIEK 434
RLTEK+ +LKGVL++L DL RA+KGKPPL KD+DGK+KRNL PEALERK+AQTNAKIEK
Sbjct: 779 RLTEKIEDLKGVLKDLRVDLDRAKKGKPPLMKDSDGKRKRNLAPEALERKMAQTNAKIEK 838
Query: 433 TERDMNTKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFSWAMDVDP 254
ERDM TKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKF+WAMDVDP
Sbjct: 839 MERDMKTKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMDVDP 898
Query: 253 DFRF 242
+FRF
Sbjct: 899 EFRF 902
>ref|XP_006452479.1| hypothetical protein CICLE_v10007398mg [Citrus clementina]
gi|567920950|ref|XP_006452481.1| hypothetical protein
CICLE_v10007398mg [Citrus clementina]
gi|557555705|gb|ESR65719.1| hypothetical protein
CICLE_v10007398mg [Citrus clementina]
gi|557555707|gb|ESR65721.1| hypothetical protein
CICLE_v10007398mg [Citrus clementina]
Length = 902
Score = 1004 bits (2596), Expect = 0.0
Identities = 554/959 (57%), Positives = 652/959 (67%), Gaps = 11/959 (1%)
Frame = -2
Query: 3085 MAVQACVQSNML---DDDDDEPLVFKRSTA-SKQNQLNSEIKKSLPPKNAGSSGRQVPDV 2918
MAV+A + + + DDD+D P VFKR+TA S+QN N E+K+ P
Sbjct: 1 MAVEASSKPSRVYDFDDDEDGPAVFKRNTAASRQNLANPEVKR--------------PSS 46
Query: 2917 QSPNGQRSSSQKGKT-VPSAKPSGVK---PSMXXXXXXXXXXXXXXXXXXXXXXXXXXXX 2750
+ NGQ S++ K KT V S+K VK PS
Sbjct: 47 STANGQNSNAPKDKTTVSSSKVLPVKSPPPSQKATTSSAKASP----------------- 89
Query: 2749 XXXXXXXXXXXSGVKSSTASPEVSSLSANASPVKSSLANSKGLPSSANQLNHSSKQNS-S 2573
+KS SP S + SPVKS +ANSK ++L + N+ +
Sbjct: 90 -------------LKSPMRSPVKSPVR---SPVKSPVANSKESSPLDDRLKQLPQHNALA 133
Query: 2572 IVKEEKHSVKHXXXXXXXXXXXXXXXPLSVRISAGLSKGSNNHANKGLSTNNPHPSQSQK 2393
+VK+E+ +K PLS R+ KG+ + N+G+ + + S+
Sbjct: 134 VVKKEE--IKDGNGLKSDDNDSEDDKPLSARL-----KGNTKNVNQGIGASKADAAISE- 185
Query: 2392 PNINIKNEESDDDDEMPLSSRFXXXXXXXXXXXXXXSDEKKPMASKLQQNGSTMRDDQRK 2213
+N+K + D DDE+PLSSRF SDEKKP+ASK+QQNGST R+ Q+K
Sbjct: 186 --VNVKTDPEDSDDEVPLSSRFPKSNAGTSGAKPIDSDEKKPLASKVQQNGSTSRETQQK 243
Query: 2212 SPPVFNKRPLDXXXXXXXXXXXXXKLSGASQPIKNNQVSIKAEPKAEDDDHVPIAQRIKK 2033
S V KRPL K+S S+ +K QV++K E KA+DDDH+PI+QR+K
Sbjct: 244 SSSVPVKRPLQKASSSGASSAKKPKVSDTSKEVKVKQVTVKVEKKADDDDHIPISQRMKN 303
Query: 2032 SASSDGKSLSANQKAPXXXXXXXXXXXXXXXXXXXXXXXXXXXKMQPSSGEGQK-WTTLV 1856
SA S KS++ KA KM P SG+GQK WTTLV
Sbjct: 304 SAPSVKKSVTNTAKATKSVSSSSKKINKKTKKVIKNSQYSKSTKMLPGSGDGQKKWTTLV 363
Query: 1855 HNGVIFPPPYKPHGVKMLYKGKPVDLTPEQEEVATMFAVMIDTDYAKKEKFIENFMTDWK 1676
HNGVIFPPPY PHGVKMLYKGK V+LTPEQEEVATMFAVM+DTDY +K KF ENF DW+
Sbjct: 364 HNGVIFPPPYLPHGVKMLYKGKEVNLTPEQEEVATMFAVMLDTDYMQKPKFRENFWNDWR 423
Query: 1675 KILGKNHIIQKFEDCDFRPIYEWHQAXXXXXXXXXXXXXXXXXXXXXXXXXXXMWAVLDG 1496
K+LGKNH+IQ E CDF+PIY+WHQ MWA++DG
Sbjct: 424 KLLGKNHVIQNLEGCDFKPIYDWHQEQKEKKKQMSSEEKKALKEEKLKQEEKYMWAIVDG 483
Query: 1495 VKEKVGNFRVEPPGLFRGRGEHPKMGKLKRRIRPSDITINIGKGAPIPECPIPGERWREV 1316
VKEKVGNFRVEPPGLFRGRGEHPKMGKLK+RI+PSDITINIGK PIPECPIPGE W+EV
Sbjct: 484 VKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIQPSDITINIGKDVPIPECPIPGESWKEV 543
Query: 1315 RHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKSRTLKNYIEGIRTAYTR 1136
+HDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSD+EKYEK+R LK+YI IR AYT+
Sbjct: 544 KHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDREKYEKARKLKDYIHSIRAAYTK 603
Query: 1135 DFTNKDVTKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVTLVPPNKLEFDF 956
DF ++D T+RQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKV NV +PPNKL+FDF
Sbjct: 604 DFVSRDGTRRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVGNVECIPPNKLKFDF 663
Query: 955 LGKDSIRXXXXXXXXXXXYKAIGEFQKGKRGSDDLFDELDTSKLNTHLKELMPGLTAKVF 776
LGKDSI+ YKAIG+FQ GK+ +DDLFD+LDT+KLN HLKELMPGLTAKVF
Sbjct: 664 LGKDSIQYVNTVEVELPVYKAIGQFQTGKKQNDDLFDKLDTAKLNAHLKELMPGLTAKVF 723
Query: 775 RTYNASITLDEMLSRDTKDGDVPEKIVVYNAANKEVAIICNHQRTISKSHAAQMTRLTEK 596
RTYNASITLD ML++ T DGDV KI VY ANKEVAIICNHQRT+SK+H+AQM+RLTEK
Sbjct: 724 RTYNASITLDGMLNKGTGDGDVAVKIDVYQRANKEVAIICNHQRTVSKTHSAQMSRLTEK 783
Query: 595 MNELKGVLEELETDLARARKGKPPL-KDADGKQKRNLTPEALERKIAQTNAKIEKTERDM 419
+ +LKGVL++L DL RA+KGKPPL KD+DGK+KRNL PEALERK+AQTNAKIEK ERDM
Sbjct: 784 IEDLKGVLKDLRVDLDRAKKGKPPLMKDSDGKRKRNLAPEALERKMAQTNAKIEKMERDM 843
Query: 418 NTKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFSWAMDVDPDFRF 242
TKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKF+WAMDVDP+FRF
Sbjct: 844 KTKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMDVDPEFRF 902
>dbj|BAG31375.1| topoisomerase I [Ophiorrhiza japonica]
Length = 927
Score = 1004 bits (2595), Expect = 0.0
Identities = 567/983 (57%), Positives = 637/983 (64%), Gaps = 35/983 (3%)
Frame = -2
Query: 3085 MAVQACVQSNMLDDDDDE-PLVFKRST-ASKQNQLNSEIKKSLPPKNAGSSGRQVPDVQS 2912
MAV+AC + M D +DDE P++FKRS ASKQNQ NSE KK K+ G S DV+
Sbjct: 1 MAVEACTPNLMEDMEDDEGPVIFKRSNPASKQNQANSEKKKLSLQKHVGQSAVHTSDVRP 60
Query: 2911 PNGQRSSSQKGKTVPSAKPSGVKPSMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 2732
NG+ SS+QKG+ PSAK V
Sbjct: 61 ANGESSSAQKGRIQPSAKTPPV-------------------------------------- 82
Query: 2731 XXXXXSGVKSSTASPEVSSLSANASPVKSSLANSK---GLPSSANQLNHSSKQNSSIVKE 2561
KS +SP+ S+ SA ASP+ S ANSK S+A Q NH ++S+ E
Sbjct: 83 --------KSPLSSPKASNSSAKASPITSPGANSKPSASATSTAKQQNHH--KSSAAFIE 132
Query: 2560 EKHSVKHXXXXXXXXXXXXXXXPLSVRISAGLSKGSNNHANKGLSTNNPHPSQSQKPNIN 2381
K SV PLS R SKG +NHANK S
Sbjct: 133 PKPSVP-AAKANSNSESSDDEKPLSARTFGCSSKGKSNHANK-------EGGDSCSIRRR 184
Query: 2380 IKNEESDDDDEMPLSSRFXXXXXXXXXXXXXXS-DEKKPMASKLQQNGSTMRDD-QRKSP 2207
+ E D +DE PLS RF DEKKP+A+K+QQNGS RD KS
Sbjct: 185 VIEESEDSEDEKPLSRRFTSKSSLGESTSKSYDSDEKKPLAAKVQQNGSVSRDGPMNKSA 244
Query: 2206 PVFNKRPLDXXXXXXXXXXXXXKLSGASQPIKNNQVSIKAEP------------------ 2081
+ NKRP KLS I N Q ++K EP
Sbjct: 245 SLSNKRPPGEVKSLNQSSVKKPKLSSPITSISNKQAAVKPEPEPKAEDDDDNIPLSQRGK 304
Query: 2080 ---------KAEDDDHVPIAQRIKKSASSDGKSLSANQKAPXXXXXXXXXXXXXXXXXXX 1928
K EDDD+VPIAQRIKKS +S KS + +KA
Sbjct: 305 KSQAATSKPKDEDDDNVPIAQRIKKSPASVSKSSAPVKKASTVVSPSLKKVNKNSKKVIK 364
Query: 1927 XXXXXXXXKMQPSSGEGQKWTTLVHNGVIFPPPYKPHGVKMLYKGKPVDLTPEQEEVATM 1748
K+ P SGEGQKWTTLVHNGVIFPPPY PHGVKMLYK +P+ LTPEQEEVATM
Sbjct: 365 KTAYTKSSKVPPGSGEGQKWTTLVHNGVIFPPPYNPHGVKMLYKRQPITLTPEQEEVATM 424
Query: 1747 FAVMIDTDYAKKEKFIENFMTDWKKILGKNHIIQKFEDCDFRPIYEWHQAXXXXXXXXXX 1568
FAVM+DTDY K +F ENF +DWKK+LGKNH IQ EDCDF PIYEWHQ
Sbjct: 425 FAVMLDTDYMNKPRFKENFFSDWKKMLGKNHTIQNLEDCDFGPIYEWHQQEKEKKKQMTT 484
Query: 1567 XXXXXXXXXXXXXXXXXMWAVLDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKRRIRPSD 1388
MWA++DGVKEKVGNFRVEPPGLFRGRGEHPKMGKLK+RIRP D
Sbjct: 485 EEKKALKEDKLQQEEKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPRD 544
Query: 1387 ITINIGKGAPIPECPIPGERWREVRHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQS 1208
ITINIGK APIPECPIPGERW+EVR+DNTVTWLAFW DPIN KEFKYVFLAASS+LKGQS
Sbjct: 545 ITINIGKDAPIPECPIPGERWKEVRNDNTVTWLAFWIDPINQKEFKYVFLAASSTLKGQS 604
Query: 1207 DKEKYEKSRTLKNYIEGIRTAYTRDFTN-KDVTKRQIAVATYLIDKLALRAGNEKDDDEA 1031
DKEKYEK+R LK+YI GIR AYT+DFTN KD K+QIAVATYLIDKLALRAGNEKDDDEA
Sbjct: 605 DKEKYEKARLLKDYIHGIRAAYTKDFTNNKDPMKKQIAVATYLIDKLALRAGNEKDDDEA 664
Query: 1030 DTVGCCTLKVENVTLVPPNKLEFDFLGKDSIRXXXXXXXXXXXYKAIGEFQKGKRGSDDL 851
DTVGCCTLKVENV VPPN L+FDFLGKDSIR +KAI +F+ GK GS+DL
Sbjct: 665 DTVGCCTLKVENVEPVPPNILKFDFLGKDSIRYQNEVQVEPAVFKAIQQFRSGKEGSEDL 724
Query: 850 FDELDTSKLNTHLKELMPGLTAKVFRTYNASITLDEMLSRDTKDGDVPEKIVVYNAANKE 671
FD LDTSKLN HLKELMPGLTAKVFRTYNASITLD+MLS++TK G+V EK+VVY ANKE
Sbjct: 725 FDRLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDMLSKETKGGEVAEKVVVYQHANKE 784
Query: 670 VAIICNHQRTISKSHAAQMTRLTEKMNELKGVLEELETDLARARKGKPPLKDADGKQKRN 491
VAIICNHQRT+SKSH+AQM+RL EK++ELK +EEL+TDL+R +KGKPP K ADGK KRN
Sbjct: 785 VAIICNHQRTVSKSHSAQMSRLNEKIDELKTAMEELKTDLSRVKKGKPPSKGADGKPKRN 844
Query: 490 LTPEALERKIAQTNAKIEKTERDMNTKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIE 311
L PEALERK+AQ NAKIEK ERD TKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIE
Sbjct: 845 LNPEALERKMAQINAKIEKMERDKETKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIE 904
Query: 310 KIFNKSLLAKFSWAMDVDPDFRF 242
KIFNKSLLAKF+W+MDVDP FRF
Sbjct: 905 KIFNKSLLAKFAWSMDVDPSFRF 927
>dbj|BAK32960.1| topoisomerase I [Ophiorrhiza pseudofasciculata]
Length = 925
Score = 1003 bits (2594), Expect = 0.0
Identities = 569/981 (58%), Positives = 637/981 (64%), Gaps = 33/981 (3%)
Frame = -2
Query: 3085 MAVQACVQSNMLD-DDDDEPLVFKRST-ASKQNQLNSEIKKSLPPKNAGSSGRQVPDVQS 2912
MAV+AC + M D +DD P++FKRS A KQNQ NSE KK K G S DV+
Sbjct: 1 MAVEACTTNLMEDMEDDGGPVIFKRSKPAPKQNQANSEKKKLSLQKQDGQSAVHTSDVRP 60
Query: 2911 PNGQRSSSQKGKTVPSAKPSGVKPSMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 2732
NG+ SS+QKG+ PSAK V
Sbjct: 61 ANGESSSAQKGRIQPSAKTPPV-------------------------------------- 82
Query: 2731 XXXXXSGVKSSTASPEVSSLSANASPVKSSLANSK---GLPSSANQLNHSSKQNSSIVKE 2561
KS +SP+ S+ SA ASP+ S ANSK S+A Q NH ++S+ E
Sbjct: 83 --------KSPLSSPKASNSSAKASPITSPGANSKPSASATSTAKQQNHH--KSSAAFIE 132
Query: 2560 EKHSVKHXXXXXXXXXXXXXXXPLSVRISAGLSKGSNNHANKGLSTNNPHPSQSQKPNIN 2381
K SV PLS R SKG +NHANK ++P I
Sbjct: 133 PKPSVP-AAKANSNSESSDDEKPLSARTFGCSSKGKSNHANK----EGGDSCSIRRPVIE 187
Query: 2380 IKNEESDDDDEMPLSSRFXXXXXXXXXXXXXXS-DEKKPMASKLQQNGSTMRDD-QRKSP 2207
E D +DE PLS RF DEKKP+A+K+QQNGS RD KS
Sbjct: 188 ---ESEDSEDEKPLSCRFTSKSSLGESTSKSYDSDEKKPLAAKVQQNGSASRDGPMNKSA 244
Query: 2206 PVFNKRPLDXXXXXXXXXXXXXKLSGASQPIKNNQVSIKAEPKAEDDD------------ 2063
+ NKRP KLS I N Q ++K EPKAEDDD
Sbjct: 245 SLSNKRPPGEAKSLNQSSVKKPKLSSPITSISNKQAAVKPEPKAEDDDDNIPLSQRGKKS 304
Query: 2062 -------------HVPIAQRIKKSASSDGKSLSANQKAPXXXXXXXXXXXXXXXXXXXXX 1922
+VPI+QRIKKS +S KS +KA
Sbjct: 305 QSATSKPKDDDDDNVPISQRIKKSPASVSKSSVPVKKASTVVSSSLKKVNKNSKKVIKKT 364
Query: 1921 XXXXXXKMQPSSGEGQKWTTLVHNGVIFPPPYKPHGVKMLYKGKPVDLTPEQEEVATMFA 1742
K+ P SGEGQKWTTLVHNGVIFPPPYKPHGVKMLYK +P+ LTPEQEEVATMFA
Sbjct: 365 AYTKSSKVPPGSGEGQKWTTLVHNGVIFPPPYKPHGVKMLYKRQPITLTPEQEEVATMFA 424
Query: 1741 VMIDTDYAKKEKFIENFMTDWKKILGKNHIIQKFEDCDFRPIYEWHQAXXXXXXXXXXXX 1562
VM+DTDY K F ENF +DWKKILGKNH+IQ EDCDF PIYEWHQ
Sbjct: 425 VMLDTDYMNKPCFKENFFSDWKKILGKNHMIQNLEDCDFGPIYEWHQQEKEKKKQMTTEE 484
Query: 1561 XXXXXXXXXXXXXXXMWAVLDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKRRIRPSDIT 1382
MWA++DGVKEKVGNFRVEPPGLFRGRGEHPKMGKLK+RIRP DIT
Sbjct: 485 KKALKEEKLQQEEKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPRDIT 544
Query: 1381 INIGKGAPIPECPIPGERWREVRHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDK 1202
INIGK APIPECPIPGERW+EVR+ NTVTWLA+WNDPIN KEFKYVFLAASS+LKGQSDK
Sbjct: 545 INIGKDAPIPECPIPGERWKEVRNGNTVTWLAYWNDPINQKEFKYVFLAASSTLKGQSDK 604
Query: 1201 EKYEKSRTLKNYIEGIRTAYTRDFTN-KDVTKRQIAVATYLIDKLALRAGNEKDDDEADT 1025
EKYEK+R LK+YI GIR AYT+DFTN KD K+QIAVATYLIDKLALRAGNEKDDDEADT
Sbjct: 605 EKYEKARLLKDYIHGIRAAYTKDFTNNKDPMKKQIAVATYLIDKLALRAGNEKDDDEADT 664
Query: 1024 VGCCTLKVENVTLVPPNKLEFDFLGKDSIRXXXXXXXXXXXYKAIGEFQKGKRGSDDLFD 845
VGCCTLKVENV VPPN L+FDFLGKDSIR +KAI +F+ GK GS+DLFD
Sbjct: 665 VGCCTLKVENVEPVPPNILKFDFLGKDSIRYQNEVQVEPAVFKAIQQFRSGKEGSEDLFD 724
Query: 844 ELDTSKLNTHLKELMPGLTAKVFRTYNASITLDEMLSRDTKDGDVPEKIVVYNAANKEVA 665
LDTSKLN HLKELMPGLTAKVFRTYNASITLD+MLS++TK G+V E +VVY ANKEVA
Sbjct: 725 RLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDMLSKETKGGEVAENVVVYQHANKEVA 784
Query: 664 IICNHQRTISKSHAAQMTRLTEKMNELKGVLEELETDLARARKGKPPLKDADGKQKRNLT 485
IICNHQRT+SKSH+AQM+RL EK++ELK LEEL+TDL+RA+KGKPP K ADGK KRNL
Sbjct: 785 IICNHQRTVSKSHSAQMSRLNEKIDELKTALEELKTDLSRAKKGKPPTKGADGKAKRNLN 844
Query: 484 PEALERKIAQTNAKIEKTERDMNTKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKI 305
PEALERKI QTNAKIEK ERD TKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKI
Sbjct: 845 PEALERKITQTNAKIEKMERDKETKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKI 904
Query: 304 FNKSLLAKFSWAMDVDPDFRF 242
FNKSLLAKF+W+MDVDP FRF
Sbjct: 905 FNKSLLAKFAWSMDVDPSFRF 925
>dbj|BAK32958.1| topoisomerase I [Ophiorrhiza pedunculata]
Length = 920
Score = 996 bits (2576), Expect = 0.0
Identities = 563/975 (57%), Positives = 636/975 (65%), Gaps = 34/975 (3%)
Frame = -2
Query: 3085 MAVQACVQSNMLDD--DDDEPLVFKRST-ASKQNQLNSEIKKSLPPKNAGSSGRQVPDVQ 2915
MAV+AC +N+++D DD+ P++FKRS ASKQNQ NSE KK K+ G S DV+
Sbjct: 1 MAVEACTTTNLMEDMEDDEGPVIFKRSNPASKQNQANSEKKKLSLQKHVGQSAVHTSDVR 60
Query: 2914 SPNGQRSSSQKGKTVPSAKPSGVKPSMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 2735
NG+ SS+QKG+ PSAK V
Sbjct: 61 PANGENSSAQKGRIQPSAKTPPV------------------------------------- 83
Query: 2734 XXXXXXSGVKSSTASPEVSSLSANASPVKSSLANSK---GLPSSANQLNHSSKQNSSIVK 2564
KS +SP+ S+ SA ASP+ S ANSK S+A Q NH ++S+
Sbjct: 84 ---------KSPLSSPKASNSSAKASPITSPGANSKPSASATSTAKQQNHH--KSSAAFI 132
Query: 2563 EEKHSVKHXXXXXXXXXXXXXXXPLSVRISAGLSKGSNNHANKGLSTNNPHPSQSQKPNI 2384
E K SV PLS R SKG +NHANK ++P I
Sbjct: 133 EPKPSVP-AAKANSNSESSDDEKPLSARTFGCSSKGKSNHANK----EGGDSCSIRRPVI 187
Query: 2383 NIKNEESDDDDEMPLSSRFXXXXXXXXXXXXXXS-DEKKPMASKLQQNGSTMRDD-QRKS 2210
E D +DE PLS RF DEKKP+A+K+Q NGS RD KS
Sbjct: 188 E---ESEDSEDEKPLSRRFTSKSSLGESTSKSYDSDEKKPLAAKVQPNGSASRDSPMNKS 244
Query: 2209 PPVFNKRPLDXXXXXXXXXXXXXKLSGASQPIKNNQVSIKAEPKAEDDD----------- 2063
+ NKRP KLS I N Q ++K EPKAEDDD
Sbjct: 245 ASLSNKRPPGEVKSLNQSSLKKPKLSSPITSISNKQAAVKPEPKAEDDDDNIPLSQRGKK 304
Query: 2062 --------------HVPIAQRIKKSASSDGKSLSANQKAPXXXXXXXXXXXXXXXXXXXX 1925
+VPI+QRIKKS +S KS + +KA
Sbjct: 305 SQTATSKPKDEDDDNVPISQRIKKSPASVSKSSAPVKKASTVVSPSLKKVNKKSKKVIKK 364
Query: 1924 XXXXXXXKMQPSSGEGQKWTTLVHNGVIFPPPYKPHGVKMLYKGKPVDLTPEQEEVATMF 1745
K+ P SGEGQKWTTLVHNGVIFPPPYKPHGVKMLYK +P+ LTPEQEEVATMF
Sbjct: 365 TAYTKSSKVPPGSGEGQKWTTLVHNGVIFPPPYKPHGVKMLYKRQPITLTPEQEEVATMF 424
Query: 1744 AVMIDTDYAKKEKFIENFMTDWKKILGKNHIIQKFEDCDFRPIYEWHQAXXXXXXXXXXX 1565
AVM+DTDY K +F ENF +DWKK+LGKNH IQ EDCDF PIYEWHQ
Sbjct: 425 AVMLDTDYMNKPRFKENFFSDWKKMLGKNHTIQNLEDCDFGPIYEWHQQEKEKKKQMTTE 484
Query: 1564 XXXXXXXXXXXXXXXXMWAVLDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKRRIRPSDI 1385
MWA++DGVKEKVGNFRVEPPGLFRGRGEHPKMGKLK+RIRP DI
Sbjct: 485 EKKALKEEKLQQEEKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPRDI 544
Query: 1384 TINIGKGAPIPECPIPGERWREVRHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSD 1205
TINIGK APIPECPIPGERW+EVR+DNTVTWLA+WNDPIN KEFKYVFLAASS+LKGQSD
Sbjct: 545 TINIGKDAPIPECPIPGERWKEVRNDNTVTWLAYWNDPINQKEFKYVFLAASSTLKGQSD 604
Query: 1204 KEKYEKSRTLKNYIEGIRTAYTRDFTN-KDVTKRQIAVATYLIDKLALRAGNEKDDDEAD 1028
KEKYEK+R LK+YI GIR AYT+DFTN KD K+QIAVATYLIDKLALRAGNEKDDDEAD
Sbjct: 605 KEKYEKARLLKDYIHGIRAAYTKDFTNNKDPMKKQIAVATYLIDKLALRAGNEKDDDEAD 664
Query: 1027 TVGCCTLKVENVTLVPPNKLEFDFLGKDSIRXXXXXXXXXXXYKAIGEFQKGKRGSDDLF 848
TVGCCTLKVENV VPPN L+FDFLGKDSIR +KAI +F+ GK GS+DLF
Sbjct: 665 TVGCCTLKVENVEPVPPNILKFDFLGKDSIRYQNEVQVEPAVFKAIHQFRSGKEGSEDLF 724
Query: 847 DELDTSKLNTHLKELMPGLTAKVFRTYNASITLDEMLSRDTKDGDVPEKIVVYNAANKEV 668
D LDTSKLN HLKELMPGLTAKVFRTYNASITLD+MLS+ T G+V EK+VVY ANKEV
Sbjct: 725 DRLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDMLSKKTNGGEVAEKVVVYQHANKEV 784
Query: 667 AIICNHQRTISKSHAAQMTRLTEKMNELKGVLEELETDLARARKGKPPLKDADGKQKRNL 488
AIICNHQRT+SKSH+AQM+RL EK++ELK LEEL+TDL+RA+KGKP K ADGK KRNL
Sbjct: 785 AIICNHQRTVSKSHSAQMSRLNEKIDELKTALEELKTDLSRAKKGKPLSKGADGKPKRNL 844
Query: 487 TPEALERKIAQTNAKIEKTERDMNTKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEK 308
PEALERKIAQTNAKIEK ERD TKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEK
Sbjct: 845 NPEALERKIAQTNAKIEKMERDKETKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEK 904
Query: 307 IFNKSLLAKFSWAMD 263
IFNKSLLAKF+WAM+
Sbjct: 905 IFNKSLLAKFAWAMN 919
>dbj|BAK32962.1| topoisomerase I [Ophiorrhiza trichocarpon var. glabra]
Length = 920
Score = 996 bits (2575), Expect = 0.0
Identities = 562/975 (57%), Positives = 637/975 (65%), Gaps = 34/975 (3%)
Frame = -2
Query: 3085 MAVQACVQSNMLDD--DDDEPLVFKRST-ASKQNQLNSEIKKSLPPKNAGSSGRQVPDVQ 2915
MAV+AC +N+++D DD+ P++FKRS ASKQNQ NSE KK ++ G S DV+
Sbjct: 1 MAVEACTTTNLMEDMEDDEGPVIFKRSNPASKQNQANSEKKKLSLQRHVGQSAVHTSDVR 60
Query: 2914 SPNGQRSSSQKGKTVPSAKPSGVKPSMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 2735
NG+ SS+QKG+ PSAK V
Sbjct: 61 PANGENSSAQKGRIQPSAKTPPV------------------------------------- 83
Query: 2734 XXXXXXSGVKSSTASPEVSSLSANASPVKSSLANSK---GLPSSANQLNHSSKQNSSIVK 2564
KS +SP+ S+ SA ASP+ S+ ANSK S+A Q NH ++S+
Sbjct: 84 ---------KSPLSSPKASNSSAKASPITSAGANSKPSASATSTAKQQNHH--KSSAAFI 132
Query: 2563 EEKHSVKHXXXXXXXXXXXXXXXPLSVRISAGLSKGSNNHANKGLSTNNPHPSQSQKPNI 2384
E K SV PLS R SKG +NHANK ++P I
Sbjct: 133 EPKPSVP-AAKANSNSESSDDEKPLSARTFGCSSKGKSNHANK----EGGDSCSIRRPVI 187
Query: 2383 NIKNEESDDDDEMPLSSRFXXXXXXXXXXXXXXS-DEKKPMASKLQQNGSTMRDD-QRKS 2210
E D +DE PLS RF DEKKP+A+K+Q NGS RD KS
Sbjct: 188 E---ESEDSEDEKPLSRRFTSKSSLGESTSKSYDSDEKKPLAAKVQPNGSASRDSPMNKS 244
Query: 2209 PPVFNKRPLDXXXXXXXXXXXXXKLSGASQPIKNNQVSIKAEPKAEDDD----------- 2063
+ NKRP KLS I N Q ++K EPKAEDDD
Sbjct: 245 ASLSNKRPPGEVKSLNQSSLKKPKLSSPITSISNKQAAVKPEPKAEDDDDNIPLSQRGKK 304
Query: 2062 --------------HVPIAQRIKKSASSDGKSLSANQKAPXXXXXXXXXXXXXXXXXXXX 1925
+VPI+QRIKKS +S KS + +KA
Sbjct: 305 SQTATSKPKDEDDDNVPISQRIKKSPASVSKSSAPVKKASTVVSPSLKKVNKKSKKVIKK 364
Query: 1924 XXXXXXXKMQPSSGEGQKWTTLVHNGVIFPPPYKPHGVKMLYKGKPVDLTPEQEEVATMF 1745
K+ P SGEGQKWTTLVHNGVIFPPPYKPHGVKMLYK +P+ LTPEQEEVATMF
Sbjct: 365 TAYTKSSKVPPGSGEGQKWTTLVHNGVIFPPPYKPHGVKMLYKRQPITLTPEQEEVATMF 424
Query: 1744 AVMIDTDYAKKEKFIENFMTDWKKILGKNHIIQKFEDCDFRPIYEWHQAXXXXXXXXXXX 1565
AVM+DTDY K +F ENF +DWKK+LGKNH IQ EDCDF PIYEWHQ
Sbjct: 425 AVMLDTDYMNKPRFKENFFSDWKKMLGKNHTIQNLEDCDFGPIYEWHQQEKEKKKQMTTE 484
Query: 1564 XXXXXXXXXXXXXXXXMWAVLDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKRRIRPSDI 1385
MWA++DGVKEKVGNFRVEPPGLFRGRGEHPKMGKLK+RIRP DI
Sbjct: 485 EKKALKEEKLQQEEKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPRDI 544
Query: 1384 TINIGKGAPIPECPIPGERWREVRHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSD 1205
TINIGK APIPECPIPGERW+EVR+DNTVTWLA+WNDPIN KEFKYVFLAASS+LKGQSD
Sbjct: 545 TINIGKDAPIPECPIPGERWKEVRNDNTVTWLAYWNDPINQKEFKYVFLAASSTLKGQSD 604
Query: 1204 KEKYEKSRTLKNYIEGIRTAYTRDFTN-KDVTKRQIAVATYLIDKLALRAGNEKDDDEAD 1028
KEKYEK+R LK+YI GIR AYT+DFTN KD K+QIAVATYLIDKLALRAGNEKDDDEAD
Sbjct: 605 KEKYEKARLLKDYIHGIRAAYTKDFTNNKDPMKKQIAVATYLIDKLALRAGNEKDDDEAD 664
Query: 1027 TVGCCTLKVENVTLVPPNKLEFDFLGKDSIRXXXXXXXXXXXYKAIGEFQKGKRGSDDLF 848
TVGCCTLKVENV VPPN L+FDFLGKDSIR +KAI +F+ GK GS+DLF
Sbjct: 665 TVGCCTLKVENVEPVPPNILKFDFLGKDSIRYQNEVQVEPAVFKAIQQFRSGKEGSEDLF 724
Query: 847 DELDTSKLNTHLKELMPGLTAKVFRTYNASITLDEMLSRDTKDGDVPEKIVVYNAANKEV 668
D LDTSKLN HLKELMPGLTAKVFRTYNASITLD+MLS+ T G+V EK+VVY ANKEV
Sbjct: 725 DRLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDMLSKKTNGGEVAEKVVVYQHANKEV 784
Query: 667 AIICNHQRTISKSHAAQMTRLTEKMNELKGVLEELETDLARARKGKPPLKDADGKQKRNL 488
AIICNHQRT+SKSH+AQM+RL EK++ELK LEEL+TDL+RA+KGKP K ADGK KRNL
Sbjct: 785 AIICNHQRTVSKSHSAQMSRLNEKIDELKTALEELKTDLSRAKKGKPLSKGADGKPKRNL 844
Query: 487 TPEALERKIAQTNAKIEKTERDMNTKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEK 308
PEALERKIAQTNAKIEK ERD TKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEK
Sbjct: 845 NPEALERKIAQTNAKIEKMERDKETKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEK 904
Query: 307 IFNKSLLAKFSWAMD 263
IFNKSLLAKF+WAM+
Sbjct: 905 IFNKSLLAKFAWAMN 919
>ref|XP_002529020.1| DNA topoisomerase type I, putative [Ricinus communis]
gi|223531500|gb|EEF33331.1| DNA topoisomerase type I,
putative [Ricinus communis]
Length = 891
Score = 994 bits (2571), Expect = 0.0
Identities = 554/966 (57%), Positives = 644/966 (66%), Gaps = 18/966 (1%)
Frame = -2
Query: 3085 MAVQACVQSNMLD---DDDDEPLVFKR--STASKQNQLNSEIKKSLPPKNAGSSGRQVPD 2921
MA A + N+ + DDDD PLVFKR ++ +KQNQ N E+KK L
Sbjct: 3 MAAPATAKPNIYEYDEDDDDMPLVFKRGNNSTTKQNQSNPEVKKPLLSS----------- 51
Query: 2920 VQSPNGQRSSSQKGK-TVPSAKPSGVKPSMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 2744
Q+ NGQ S++QKGK TVPS K S V
Sbjct: 52 -QNSNGQSSNAQKGKSTVPSLKASPV---------------------------------- 76
Query: 2743 XXXXXXXXXSGVKSSTASPEVSSLSANASPVKSSLANSKGLPSSANQLNHSSKQNSS-IV 2567
KS SP+ S+ SA ASP++S +ANSKG S QL +SKQN+S +V
Sbjct: 77 ------------KSPIGSPKASTSSAKASPLRSPVANSKGSSSLDEQLKQASKQNASNVV 124
Query: 2566 KEEKH--------SVKHXXXXXXXXXXXXXXXPLSVRISAGLSKGSNNHANKGLSTNNPH 2411
K+ SVKH PLS R KG+ N+ +K ++
Sbjct: 125 KDVSSAKPEIGLKSVKHETKSNGDDEDSEDDLPLSAR-----RKGNTNNVSKVVTAPK-- 177
Query: 2410 PSQSQKPNINIKNEESDDDDEMPLSSRFXXXXXXXXXXXXXXS-DEKKPMASKLQQNGST 2234
+K+E+SDDD ++PL SRF + EKKP+ SK+QQNGST
Sbjct: 178 ---------RVKDEDSDDD-KVPLCSRFPMKSTAGTSGNKPNNISEKKPLPSKVQQNGST 227
Query: 2233 MRDDQRKSPPVFNKRPLDXXXXXXXXXXXXXKLSGASQPIKNNQVSIKAEPKAEDDDHVP 2054
+D Q+K+P + KRPLD KLS S K Q ++KAE +D D +P
Sbjct: 228 SKDKQQKAPLIPTKRPLDKANSSEQSSIKKPKLSAGSTITKVKQATVKAEE--DDPDDIP 285
Query: 2053 IAQRIKKSASSDGKSLSANQKAPXXXXXXXXXXXXXXXXXXXXXXXXXXXKMQPSSGEGQ 1874
IAQR K SS+ K SA QKA K+QPSS +GQ
Sbjct: 286 IAQRKKSLGSSESKLSSAKQKAIKVVSSSFKKPIKKNKKQMKNTKYSKSTKVQPSSTDGQ 345
Query: 1873 K-WTTLVHNGVIFPPPYKPHGVKMLYKGKPVDLTPEQEEVATMFAVMIDTDYAKKEKFIE 1697
K WTTL+HNGVIFPPPYKPHG+K+LYKG+PVDL PEQEEVATMFAVM DTDY +K KF+E
Sbjct: 346 KKWTTLIHNGVIFPPPYKPHGIKILYKGRPVDLAPEQEEVATMFAVMKDTDYMQKPKFLE 405
Query: 1696 NFMTDWKKILGKNHIIQKFEDCDFRPIYEWHQAXXXXXXXXXXXXXXXXXXXXXXXXXXX 1517
NF DW+K+LG+NH+IQK EDCDF PIYEWH+
Sbjct: 406 NFWNDWRKLLGRNHVIQKLEDCDFTPIYEWHEREKEKKKQMSTEEKKAQKEEKLRQEEKY 465
Query: 1516 MWAVLDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKRRIRPSDITINIGKGAPIPECPIP 1337
MWA++DGVKEKVGNFRVEPP LFRGRGEHPKMGKLK+RI+PSDITINIGK APIPECPIP
Sbjct: 466 MWAIVDGVKEKVGNFRVEPPALFRGRGEHPKMGKLKKRIQPSDITINIGKDAPIPECPIP 525
Query: 1336 GERWREVRHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKSRTLKNYIEG 1157
GE W+EV+HDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEK+R LK+YI
Sbjct: 526 GESWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARKLKDYIHN 585
Query: 1156 IRTAYTRDFTNKDVTKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVTLVPP 977
IR AY +D +KD+TK+QIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKV NV +P
Sbjct: 586 IRAAYQKDLRSKDITKKQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVANVECIPG 645
Query: 976 N-KLEFDFLGKDSIRXXXXXXXXXXXYKAIGEFQKGKRGSDDLFDELDTSKLNTHLKELM 800
+ L+FDFLGKDSIR Y+AIG FQKGK+ +DDLFD+LDT+KLN HLKELM
Sbjct: 646 SFNLKFDFLGKDSIRYENTVEVKPEVYEAIGTFQKGKKQTDDLFDKLDTTKLNAHLKELM 705
Query: 799 PGLTAKVFRTYNASITLDEMLSRDTKDGDVPEKIVVYNAANKEVAIICNHQRTISKSHAA 620
PGLTAKVFRTYNASITLDE L +T+DGDV EK+V+Y ANKEVAIICNHQRTISKSH A
Sbjct: 706 PGLTAKVFRTYNASITLDEKLYEETEDGDVAEKVVIYQRANKEVAIICNHQRTISKSHGA 765
Query: 619 QMTRLTEKMNELKGVLEELETDLARARKGKPPLKDADGKQKRNLTPEALERKIAQTNAKI 440
QM++L EK+ ELK L+EL+TDL RA+KGKPPLKDADGKQKRNL+PE +E+KIA TN +I
Sbjct: 766 QMSKLIEKIEELKATLKELKTDLDRAKKGKPPLKDADGKQKRNLSPENIEKKIASTNQRI 825
Query: 439 EKTERDMNTKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFSWAMDV 260
EK E +M TKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKF+WAMDV
Sbjct: 826 EKMELNMKTKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFTWAMDV 885
Query: 259 DPDFRF 242
DP FRF
Sbjct: 886 DPQFRF 891
>ref|XP_004149585.1| PREDICTED: DNA topoisomerase 1-like [Cucumis sativus]
gi|449503189|ref|XP_004161878.1| PREDICTED: DNA
topoisomerase 1-like [Cucumis sativus]
Length = 889
Score = 992 bits (2564), Expect = 0.0
Identities = 550/958 (57%), Positives = 644/958 (67%), Gaps = 10/958 (1%)
Frame = -2
Query: 3085 MAVQACVQSNMLDDDDDE--PLVFKRSTASKQNQLNSEIKKSLPPKNAGSSGRQVPDVQS 2912
MAV+ ++ M DDDD++ P+VFKR++AS+QNQL+SEIK S + + GRQ D+ S
Sbjct: 1 MAVETFGKAPMFDDDDEDNMPIVFKRTSASRQNQLDSEIKHSQAQRLSKLPGRQGSDLCS 60
Query: 2911 PNGQRSSSQKGKTVPSAKPSGVKPSMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 2732
NGQ SS K + S
Sbjct: 61 TNGQ--SSNNQKRMTSLP------------------------------------------ 76
Query: 2731 XXXXXSGVKSSTASPEVSSLSAN-ASPVKSSLANSKGLPSSANQLNHSSKQN--SSIVKE 2561
K+S E+ S A+ +SP+ L S G A+ S ++ +++VKE
Sbjct: 77 --------KTSPMRSEIGSQKASRSSPIPEPLTKSLGTSLKASHSMDSRPKSLVNAVVKE 128
Query: 2560 EKHSVKHXXXXXXXXXXXXXXXPLSVRISAGLSKGSNNHANKGLSTNNPHPSQSQKPNIN 2381
E S+ PLS+R+ KG+ N NKGL S P
Sbjct: 129 ENVSIN----PSQENSDSEDDKPLSIRL-----KGNPNQPNKGLV--------STVPKNK 171
Query: 2380 IKNEESDDDDEMPLSSRFXXXXXXXXXXXXXXS-DEKKPMASKLQQNGSTMRDDQRKSPP 2204
+K +D DDE+PLSS+F DEKKP+ K+ QNGST RD +K
Sbjct: 172 VKKSLADSDDEVPLSSKFQMKHASGVLGSKQHGFDEKKPLVPKVHQNGSTSRDKLQKPAV 231
Query: 2203 VFNKRPL--DXXXXXXXXXXXXXKLSGASQPIKNNQVSIKAEPKAEDDDH-VPIAQRIKK 2033
+ +KRPL + KL+ +S P+ + VS+KA+ + +DDD +PI+QR+KK
Sbjct: 232 LSSKRPLPNEDSHSPSQFPTKKPKLTDSSSPLNSKLVSLKAKQEVDDDDDDIPISQRMKK 291
Query: 2032 SASSDGKSLSANQKAPXXXXXXXXXXXXXXXXXXXXXXXXXXXKMQPSSGEGQK-WTTLV 1856
+++ KS S+ K+ PS+G+GQK WTTLV
Sbjct: 292 VSATVNKSSSSKPTISKVVSSSIKKTFKKSKKPVKKSKYVKSTKLLPSAGDGQKKWTTLV 351
Query: 1855 HNGVIFPPPYKPHGVKMLYKGKPVDLTPEQEEVATMFAVMIDTDYAKKEKFIENFMTDWK 1676
HNGVIFPPPY+ HGVKMLYKGKPVDLTP QEEVATMFAVM DTDY K KF ENF DW+
Sbjct: 352 HNGVIFPPPYQTHGVKMLYKGKPVDLTPPQEEVATMFAVMKDTDYMLKPKFKENFWNDWR 411
Query: 1675 KILGKNHIIQKFEDCDFRPIYEWHQAXXXXXXXXXXXXXXXXXXXXXXXXXXXMWAVLDG 1496
K+LGKNH+IQ +DCDF PIY+W+Q MWA+LDG
Sbjct: 412 KLLGKNHVIQNLDDCDFTPIYDWYQMEKEKKKQMTTEEKKAVKEEKLKQEEKYMWAILDG 471
Query: 1495 VKEKVGNFRVEPPGLFRGRGEHPKMGKLKRRIRPSDITINIGKGAPIPECPIPGERWREV 1316
VKEKVGNFRVEPPGLFRGRGEHPKMGKLKRRI PSDITINIGKGAPIPECPIPGERW+EV
Sbjct: 472 VKEKVGNFRVEPPGLFRGRGEHPKMGKLKRRICPSDITINIGKGAPIPECPIPGERWKEV 531
Query: 1315 RHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKSRTLKNYIEGIRTAYTR 1136
RHDNTVTWLAFWNDPIN KEFKYVFLAASSSLKGQSDKEKYEK+R LK+YI+ IR AYT+
Sbjct: 532 RHDNTVTWLAFWNDPINQKEFKYVFLAASSSLKGQSDKEKYEKARMLKDYIKNIRNAYTK 591
Query: 1135 DFTNKDVTKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVTLVPPNKLEFDF 956
DFT+KD T+RQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENV VPPN LEF+F
Sbjct: 592 DFTSKDPTRRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVKAVPPNLLEFNF 651
Query: 955 LGKDSIRXXXXXXXXXXXYKAIGEFQKGKRGSDDLFDELDTSKLNTHLKELMPGLTAKVF 776
LGKDSIR +KAI +FQ GK G+DDLFD+LDTSKLN HLK+LMPGLTAKVF
Sbjct: 652 LGKDSIRYENTVEVELPVFKAITQFQSGKSGTDDLFDKLDTSKLNAHLKDLMPGLTAKVF 711
Query: 775 RTYNASITLDEMLSRDTKDGDVPEKIVVYNAANKEVAIICNHQRTISKSHAAQMTRLTEK 596
RTYNASITLD+ML+R TK+G+V EKIV Y ANKEVAIICNHQRT+SKSH AQMTRL EK
Sbjct: 712 RTYNASITLDDMLNRGTKNGEVSEKIVTYQHANKEVAIICNHQRTVSKSHGAQMTRLNEK 771
Query: 595 MNELKGVLEELETDLARARKGKPPLKDADGKQKRNLTPEALERKIAQTNAKIEKTERDMN 416
++EL+ +L+EL+ DL RA+KGKPPLK +DGKQKRNLTPEALE+KI+QTNAKIEK ERDM
Sbjct: 772 ISELRDILKELKIDLDRAKKGKPPLKGSDGKQKRNLTPEALEKKISQTNAKIEKIERDMK 831
Query: 415 TKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFSWAMDVDPDFRF 242
TKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKF+WAMDVDPDFRF
Sbjct: 832 TKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMDVDPDFRF 889
>ref|XP_002317355.1| DNA topoisomerase family protein [Populus trichocarpa]
gi|222860420|gb|EEE97967.1| DNA topoisomerase family
protein [Populus trichocarpa]
Length = 860
Score = 991 bits (2561), Expect = 0.0
Identities = 556/940 (59%), Positives = 632/940 (67%), Gaps = 4/940 (0%)
Frame = -2
Query: 3049 DDDDDEPLVFKR--STASKQNQLNSEIKKSLPPKNAGSSGRQVPDVQSPNGQRSSSQKGK 2876
DDDDD P+VFKR ++ SKQNQ N E KK P ++ Q+ NGQ ++ KGK
Sbjct: 17 DDDDDGPIVFKRGGNSTSKQNQPNLEAKK---PSSSS---------QNSNGQSLNAHKGK 64
Query: 2875 TVPSAKPSGVKPSMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGVKSST 2696
+ S+ S P VKS
Sbjct: 65 SPISS--SNASP-------------------------------------------VKSPI 79
Query: 2695 ASPEVSSLSANASPVKSSLANSKGLPSSANQLNHSSKQNSSIVKEEKHSVKHXXXXXXXX 2516
SP+ S+ SA ASP+K + S+ +PSS S VKEE +
Sbjct: 80 GSPKASASSAKASPMKPPVTYSR-VPSS-----------SIAVKEETKPI-------VDD 120
Query: 2515 XXXXXXXPLSVRISAGLSKGSNNHANKGLSTNNPHPSQSQKPNINIKNEESDDDDEMPLS 2336
PLS R KGS N+ANKG++ P++ +K+E SDDD E+PLS
Sbjct: 121 DDSEDDKPLSSRF-----KGSTNNANKGVTV----PAR-------VKDEHSDDD-EVPLS 163
Query: 2335 SRFXXXXXXXXXXXXXXSD-EKKPMASKLQQNGSTMRDDQRKSPPVFNKRPLDXXXXXXX 2159
SRF S EK + SK+Q NGST +D Q+KS V KRP+D
Sbjct: 164 SRFAAKSNAGSSSCKTISSSEKILLVSKIQLNGSTAKDKQQKSSAVPTKRPMDNKVPSNQ 223
Query: 2158 XXXXXXKLSGASQPIKNNQVSIKAEPKAEDDDHVPIAQRIKKSASSDGKSLSANQKAPXX 1979
KLS AS QV++KAE KA+DDDH+ I+QR+KK++SS KSLS Q
Sbjct: 224 SFAKKPKLSDAST---TKQVTVKAELKADDDDHLTISQRMKKASSSSNKSLSVKQNVTKV 280
Query: 1978 XXXXXXXXXXXXXXXXXXXXXXXXXKMQPSSGEGQK-WTTLVHNGVIFPPPYKPHGVKML 1802
K+QP S +GQK W TLVHNGVIFPPPYKPHGVKML
Sbjct: 281 VSFSSKKTTKNNKKQMQNSKYSKSTKVQPGSSDGQKKWKTLVHNGVIFPPPYKPHGVKML 340
Query: 1801 YKGKPVDLTPEQEEVATMFAVMIDTDYAKKEKFIENFMTDWKKILGKNHIIQKFEDCDFR 1622
YKGKPVDLTPEQEEVATMFAVM DT+Y +K +F++NF DW+ +LGKNH+IQK E CDF
Sbjct: 341 YKGKPVDLTPEQEEVATMFAVMKDTEYVQKPQFLQNFWNDWRTLLGKNHVIQKLEACDFN 400
Query: 1621 PIYEWHQAXXXXXXXXXXXXXXXXXXXXXXXXXXXMWAVLDGVKEKVGNFRVEPPGLFRG 1442
PIYEWHQ MWA+++GVKEKVGNFRVEPPGLFRG
Sbjct: 401 PIYEWHQKEKEKKKQMSTEEKKAVREEKLKQEEMYMWAIVNGVKEKVGNFRVEPPGLFRG 460
Query: 1441 RGEHPKMGKLKRRIRPSDITINIGKGAPIPECPIPGERWREVRHDNTVTWLAFWNDPINP 1262
RGEHPKMGKLK RIRPSDITINIGK APIP+CPIPGERW+EV+HDNTVTWLAFWNDPINP
Sbjct: 461 RGEHPKMGKLKSRIRPSDITINIGKDAPIPKCPIPGERWKEVKHDNTVTWLAFWNDPINP 520
Query: 1261 KEFKYVFLAASSSLKGQSDKEKYEKSRTLKNYIEGIRTAYTRDFTNKDVTKRQIAVATYL 1082
KEFKYVFLAASSSLKGQSDKEKYEK+R LK+YI IRTAYT+DF +KD+TKRQIAVATYL
Sbjct: 521 KEFKYVFLAASSSLKGQSDKEKYEKARKLKDYIHNIRTAYTKDFASKDITKRQIAVATYL 580
Query: 1081 IDKLALRAGNEKDDDEADTVGCCTLKVENVTLVPPNKLEFDFLGKDSIRXXXXXXXXXXX 902
IDKLALRAGNEKDDDEADTVGCCTLKV NV +PPNKL+FDFLGKDSIR
Sbjct: 581 IDKLALRAGNEKDDDEADTVGCCTLKVANVECIPPNKLKFDFLGKDSIRYENTVEVELPV 640
Query: 901 YKAIGEFQKGKRGSDDLFDELDTSKLNTHLKELMPGLTAKVFRTYNASITLDEMLSRDTK 722
YKAI +FQ K+ +DDLFD LDTSKLN HLKELMPGLTAKVFRTYNASITLDE L +T+
Sbjct: 641 YKAIRQFQVAKKPTDDLFDSLDTSKLNAHLKELMPGLTAKVFRTYNASITLDEKLYEETE 700
Query: 721 DGDVPEKIVVYNAANKEVAIICNHQRTISKSHAAQMTRLTEKMNELKGVLEELETDLARA 542
DGDV EK V+YN ANK+VAIICNHQRTISKSH AQM+RLTEK+ ELKG L+E +TDL RA
Sbjct: 701 DGDVAEKFVIYNQANKQVAIICNHQRTISKSHDAQMSRLTEKLEELKGTLKEFKTDLDRA 760
Query: 541 RKGKPPLKDADGKQKRNLTPEALERKIAQTNAKIEKTERDMNTKEDLKTVALGTSKINYL 362
+KGKPPLKDADGKQKRNLTPEA+E+KIA TN KIEK E M TKEDLKTVALGTSKINYL
Sbjct: 761 KKGKPPLKDADGKQKRNLTPEAIEKKIATTNQKIEKMELSMKTKEDLKTVALGTSKINYL 820
Query: 361 DPRITVAWCKRHEVPIEKIFNKSLLAKFSWAMDVDPDFRF 242
DPRITVAWCKRHEVPIEKIFNKSLLAKF+WAMDVDP FRF
Sbjct: 821 DPRITVAWCKRHEVPIEKIFNKSLLAKFTWAMDVDPQFRF 860
>gb|EYU30724.1| hypothetical protein MIMGU_mgv1a001121mg [Mimulus guttatus]
Length = 883
Score = 990 bits (2560), Expect = 0.0
Identities = 559/955 (58%), Positives = 631/955 (66%), Gaps = 7/955 (0%)
Frame = -2
Query: 3085 MAVQACVQSNML---DDDDDEPLVFKRS-TASKQNQLNSEIKKSLPPKNAGSSGRQVPDV 2918
M V+A NM+ DDDDD PLVFKRS ++SK Q E K S NA GRQ DV
Sbjct: 1 MTVEAREDKNMMEDMDDDDDAPLVFKRSGSSSKPKQSEPENKLSSQKHNA-QVGRQSSDV 59
Query: 2917 QSPNGQRSSSQKGKTVPSAKPSGVKPSMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 2738
+ NG +++QKGK+V S+ S +KP
Sbjct: 60 RPQNGTNANAQKGKSVTSS--SSMKPP--------------------------------- 84
Query: 2737 XXXXXXXSGVKSSTASPEVSSLSANASPVKSSLANSKGLPSSANQLNHSSKQNSSIVKEE 2558
V+ S SP+ S+ S ASP+KS NSK S + SK S +KEE
Sbjct: 85 ---------VRPSLVSPKSSNSSVKASPIKSPDVNSKPSTSVVGE----SKSVKSTIKEE 131
Query: 2557 KHSVKHXXXXXXXXXXXXXXXPLSVRISAGLSKGSNNHANKGLSTNNPHPSQSQKPNINI 2378
LS R AG SK + N NK + N S KP
Sbjct: 132 NSEDSEDDKP------------LSARQVAGSSKNNPNQTNKPNAPNLGKKSNVPKPE--- 176
Query: 2377 KNEESDDDDEMPLSSRFXXXXXXXXXXXXXXS-DEKKPM-ASKLQQNGSTMRDDQRKSPP 2204
D DDE+PLS++F +EKKP+ A K +NGS +RK
Sbjct: 177 -----DSDDEIPLSAKFQGKSNAGASTSRSSHSEEKKPLVARKPDKNGSA--STERKPST 229
Query: 2203 VFNKRPLDXXXXXXXXXXXXXKLSGASQPIKNNQVSIKAEPKAEDD-DHVPIAQRIKKSA 2027
V KRP D KLS S K+ + S+K E KAEDD D VP++QR KKS
Sbjct: 230 VLQKRPADGVASAGQSNLKKPKLSD-SLASKDKKASVKPEVKAEDDEDLVPLSQRTKKST 288
Query: 2026 SSDGKSLSANQKAPXXXXXXXXXXXXXXXXXXXXXXXXXXXKMQPSSGEGQKWTTLVHNG 1847
+ + K A + K+ PSSG+GQKWTTLVHNG
Sbjct: 289 TPEKKPSPALKTNNKTNSKTNSKTNKKSKQVSKDNNYSKSSKLPPSSGDGQKWTTLVHNG 348
Query: 1846 VIFPPPYKPHGVKMLYKGKPVDLTPEQEEVATMFAVMIDTDYAKKEKFIENFMTDWKKIL 1667
VIFPPPYKPHGVKMLYKGKPV+LTPEQEEVATM+AVM++TDY KK +F ENFMTDWKKIL
Sbjct: 349 VIFPPPYKPHGVKMLYKGKPVNLTPEQEEVATMYAVMLETDYLKKPQFKENFMTDWKKIL 408
Query: 1666 GKNHIIQKFEDCDFRPIYEWHQAXXXXXXXXXXXXXXXXXXXXXXXXXXXMWAVLDGVKE 1487
GKNH+IQ E CDF PIYEWHQ MWAVLDGV+E
Sbjct: 409 GKNHVIQSLEHCDFTPIYEWHQREKEKKKQMSTDEKKALKEEKLKLEEKYMWAVLDGVRE 468
Query: 1486 KVGNFRVEPPGLFRGRGEHPKMGKLKRRIRPSDITINIGKGAPIPECPIPGERWREVRHD 1307
KVGNFRVEPPGLFRGRGEHPKMGKLKRRIRPSDITINIG+ APIPECPI GERW+E+RHD
Sbjct: 469 KVGNFRVEPPGLFRGRGEHPKMGKLKRRIRPSDITINIGRDAPIPECPIEGERWKEIRHD 528
Query: 1306 NTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKSRTLKNYIEGIRTAYTRDFT 1127
NTVTWLA+W+DPIN KEFKYVFLAASS+LKGQSDKEKYEK+R LK+YI+GIRTAYTRDF
Sbjct: 529 NTVTWLAYWSDPINGKEFKYVFLAASSTLKGQSDKEKYEKARLLKDYIQGIRTAYTRDFV 588
Query: 1126 NKDVTKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVTLVPPNKLEFDFLGK 947
+KD K+QIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENV VPPN L+FDFLGK
Sbjct: 589 SKDPAKKQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPNILKFDFLGK 648
Query: 946 DSIRXXXXXXXXXXXYKAIGEFQKGKRGSDDLFDELDTSKLNTHLKELMPGLTAKVFRTY 767
DSIR +KAI +F+ GK+G DDLFD+LDTSKLN HLKELMPGLTAKVFRTY
Sbjct: 649 DSIRYQNEVEVETAVFKAIQQFRSGKKGGDDLFDKLDTSKLNAHLKELMPGLTAKVFRTY 708
Query: 766 NASITLDEMLSRDTKDGDVPEKIVVYNAANKEVAIICNHQRTISKSHAAQMTRLTEKMNE 587
NASITLD+ LSR+TK GD+ EK+V YN ANKEVAIICNHQRT+SK+H+AQM RL EK++E
Sbjct: 709 NASITLDDKLSRETKGGDLAEKVVTYNHANKEVAIICNHQRTVSKTHSAQMLRLDEKIDE 768
Query: 586 LKGVLEELETDLARARKGKPPLKDADGKQKRNLTPEALERKIAQTNAKIEKTERDMNTKE 407
LKGVLEEL+TDL RARKGKP L ADGK KRN+ PEALERKIAQT AKIEK ERD TKE
Sbjct: 769 LKGVLEELKTDLGRARKGKPLLAGADGKAKRNINPEALERKIAQTTAKIEKMERDKETKE 828
Query: 406 DLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFSWAMDVDPDFRF 242
DLKTVALGTSKINYLDPRITVAWCKRHEVPIEK+FNKSLL KFSWAMDVDP FRF
Sbjct: 829 DLKTVALGTSKINYLDPRITVAWCKRHEVPIEKMFNKSLLEKFSWAMDVDPSFRF 883
>dbj|BAG31374.1| topoisomerase I [Ophiorrhiza liukiuensis]
Length = 926
Score = 986 bits (2548), Expect = 0.0
Identities = 557/982 (56%), Positives = 634/982 (64%), Gaps = 34/982 (3%)
Frame = -2
Query: 3085 MAVQACVQSNMLDD--DDDEPLVFKRST-ASKQNQLNSEIKKSLPPKNAGSSGRQVPDVQ 2915
MAV+AC N+++D DD+ P++FKRS ASKQNQ NSE KK K+ G S DV+
Sbjct: 1 MAVEACTTPNLMEDMEDDEGPVIFKRSNPASKQNQANSEKKKLSLQKHVGQSAVHTSDVR 60
Query: 2914 SPNGQRSSSQKGKTVPSAKPSGVKPSMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 2735
NG+ SS+QKG+ PSA+ V
Sbjct: 61 PANGESSSAQKGRIQPSAETPPV------------------------------------- 83
Query: 2734 XXXXXXSGVKSSTASPEVSSLSANASPVKSSLANSK---GLPSSANQLNHSSKQNSSIVK 2564
KS +SP+ S+ SA ASP+ S ANSK S+A Q NH ++S+
Sbjct: 84 ---------KSPLSSPKASNSSAKASPITSPGANSKLSASATSTAKQQNHH--KSSAAFI 132
Query: 2563 EEKHSVKHXXXXXXXXXXXXXXXPLSVRISAGLSKGSNNHANKGLSTNNPHPSQSQKPNI 2384
E K SV PL R S SKG +NHANK ++P I
Sbjct: 133 EPKPSVP-AAKANSNSESSDDEKPLIARTSGCSSKGKSNHANK----EGGDSCSIRRPVI 187
Query: 2383 NIKNEESDDDDEMPLSSRFXXXXXXXXXXXXXXS-DEKKPMASKLQQNGSTMRDD-QRKS 2210
E D +DE PLS RF DEKKP+A+K+QQNGS RD KS
Sbjct: 188 E---ESEDSEDEKPLSRRFPSKSSLGESTSKSYDSDEKKPLATKVQQNGSASRDGPMNKS 244
Query: 2209 PPVFNKRPLDXXXXXXXXXXXXXKLSGASQPIKNNQVSIKAEPKAEDDD----------- 2063
+ NKR KLS I N Q ++K EPKAEDDD
Sbjct: 245 ASLLNKRAPGEVKSLNQSSLKKAKLSSPITSISNKQAAVKPEPKAEDDDDNIPLSQRGKK 304
Query: 2062 --------------HVPIAQRIKKSASSDGKSLSANQKAPXXXXXXXXXXXXXXXXXXXX 1925
+ PI+QRIKKS +S KS + +KA
Sbjct: 305 SQTAASKPKDEDDDNAPISQRIKKSPASVSKSSAPVKKASTVVSPSLKKVNKKSKKVIKK 364
Query: 1924 XXXXXXXKMQPSSGEGQKWTTLVHNGVIFPPPYKPHGVKMLYKGKPVDLTPEQEEVATMF 1745
K+ P SGEGQKWTTLVHNGV+F PPYKPHGVKMLYK +P+ LTPEQEEVATMF
Sbjct: 365 TAYTKSSKVPPGSGEGQKWTTLVHNGVMFLPPYKPHGVKMLYKXQPLTLTPEQEEVATMF 424
Query: 1744 AVMIDTDYAKKEKFIENFMTDWKKILGKNHIIQKFEDCDFRPIYEWHQAXXXXXXXXXXX 1565
AVM+DTDY K +F ENF +DWKK+LGKNH +Q EDCDF PIYEWHQ
Sbjct: 425 AVMLDTDYMTKPRFKENFFSDWKKMLGKNHTVQNLEDCDFGPIYEWHQQEKEKRKQMTTE 484
Query: 1564 XXXXXXXXXXXXXXXXMWAVLDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKRRIRPSDI 1385
MWA++DGVKEKVGNFRVEPPGLFRGRGEHPKMGKLK+RIRP DI
Sbjct: 485 EKKALKEERLQQEEKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPRDI 544
Query: 1384 TINIGKGAPIPECPIPGERWREVRHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSD 1205
TINIGK APIPECPIPGERW+EVR+DNTVTWLAFWNDPIN KE KYVFLAASS+LKGQSD
Sbjct: 545 TINIGKDAPIPECPIPGERWKEVRNDNTVTWLAFWNDPINQKECKYVFLAASSTLKGQSD 604
Query: 1204 KEKYEKSRTLKNYIEGIRTAYTRDFTN-KDVTKRQIAVATYLIDKLALRAGNEKDDDEAD 1028
KEKYEK+R LK+YI GIR AYT+DFTN KD K+QIAVATYLIDKLALRAGNEKDDDEAD
Sbjct: 605 KEKYEKARLLKDYIHGIRAAYTKDFTNNKDPMKKQIAVATYLIDKLALRAGNEKDDDEAD 664
Query: 1027 TVGCCTLKVENVTLVPPNKLEFDFLGKDSIRXXXXXXXXXXXYKAIGEFQKGKRGSDDLF 848
TVGCCTLKVENV VPPN L+ DF+GKDSIR +KAI +F+ GK G DLF
Sbjct: 665 TVGCCTLKVENVEPVPPNILKIDFIGKDSIRYQNEVQVEPAVFKAIQQFRSGKEGCADLF 724
Query: 847 DELDTSKLNTHLKELMPGLTAKVFRTYNASITLDEMLSRDTKDGDVPEKIVVYNAANKEV 668
D LDTSKLN HLKELMPGLTAKVFRTYNASITLD+MLS++TK G V EK+ VY ANKEV
Sbjct: 725 DRLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDMLSKETKGGKVAEKVGVYQHANKEV 784
Query: 667 AIICNHQRTISKSHAAQMTRLTEKMNELKGVLEELETDLARARKGKPPLKDADGKQKRNL 488
AIICNHQRT+SKSH+AQM+RL EK++ELK LEEL+TDL+RA+KGKPP K ADG+ KRNL
Sbjct: 785 AIICNHQRTVSKSHSAQMSRLNEKIDELKTALEELKTDLSRAKKGKPPAKGADGEPKRNL 844
Query: 487 TPEALERKIAQTNAKIEKTERDMNTKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEK 308
PE+LERKIAQTNAKIEK ERD TKEDLK VAL TSKI+YLDPRITVAWCKRHEVPIEK
Sbjct: 845 NPESLERKIAQTNAKIEKMERDKKTKEDLKAVALSTSKISYLDPRITVAWCKRHEVPIEK 904
Query: 307 IFNKSLLAKFSWAMDVDPDFRF 242
IFNKSLLAKF+W+MDVDP FRF
Sbjct: 905 IFNKSLLAKFAWSMDVDPSFRF 926
>dbj|BAG31373.1| topoisomerase I [Ophiorrhiza pumila]
Length = 926
Score = 984 bits (2544), Expect = 0.0
Identities = 555/982 (56%), Positives = 634/982 (64%), Gaps = 34/982 (3%)
Frame = -2
Query: 3085 MAVQACVQSNMLDD--DDDEPLVFKRST-ASKQNQLNSEIKKSLPPKNAGSSGRQVPDVQ 2915
MAV+AC N+++D DD+ P++FKRS ASKQNQ NSE KK K+ G S DV+
Sbjct: 1 MAVEACTTPNLMEDMEDDEGPVIFKRSNPASKQNQANSEKKKLSLQKHVGQSAVHTSDVR 60
Query: 2914 SPNGQRSSSQKGKTVPSAKPSGVKPSMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 2735
NG+ SS+QKG+ PSA+ V
Sbjct: 61 PANGESSSAQKGRIQPSAETPPV------------------------------------- 83
Query: 2734 XXXXXXSGVKSSTASPEVSSLSANASPVKSSLANSK---GLPSSANQLNHSSKQNSSIVK 2564
KS +SP+ S+ SA ASP+ S ANSK S+A Q NH ++S+
Sbjct: 84 ---------KSPLSSPKASNSSAKASPITSPGANSKLSASATSTAKQQNHH--KSSAAFI 132
Query: 2563 EEKHSVKHXXXXXXXXXXXXXXXPLSVRISAGLSKGSNNHANKGLSTNNPHPSQSQKPNI 2384
E K SV PL R S SKG +NHANK ++P I
Sbjct: 133 EPKPSVP-AAKANSNSESSDDEKPLIARTSGCSSKGKSNHANK----EGGDSCSIRRPVI 187
Query: 2383 NIKNEESDDDDEMPLSSRFXXXXXXXXXXXXXXS-DEKKPMASKLQQNGSTMRDD-QRKS 2210
E D +DE PLS RF DEKKP+A+K+QQNGS RD KS
Sbjct: 188 E---ESEDSEDEKPLSRRFPSKSSLGESTSKSHDSDEKKPLAAKVQQNGSASRDGPMNKS 244
Query: 2209 PPVFNKRPLDXXXXXXXXXXXXXKLSGASQPIKNNQVSIKAEPKAEDDD----------- 2063
+ NKR KLS I N Q ++K EPKAEDDD
Sbjct: 245 ASLSNKRAPGEVKSLNQSSLKKPKLSSTITSISNKQAAVKPEPKAEDDDDNIPLSQRGKK 304
Query: 2062 --------------HVPIAQRIKKSASSDGKSLSANQKAPXXXXXXXXXXXXXXXXXXXX 1925
+ PI+QRIKKS +S KS + +KA
Sbjct: 305 SQTAASKPKDEDDDNAPISQRIKKSPASVSKSSAPVKKASTVVSPSLKKVNKKSKKVIKK 364
Query: 1924 XXXXXXXKMQPSSGEGQKWTTLVHNGVIFPPPYKPHGVKMLYKGKPVDLTPEQEEVATMF 1745
K+ P SGEGQKWTTLVHNGV+FPPPYKPHGVKMLYK +P+ LTPEQEEVATMF
Sbjct: 365 TAYTKSSKVPPGSGEGQKWTTLVHNGVMFPPPYKPHGVKMLYKRQPLTLTPEQEEVATMF 424
Query: 1744 AVMIDTDYAKKEKFIENFMTDWKKILGKNHIIQKFEDCDFRPIYEWHQAXXXXXXXXXXX 1565
A M+DTDY K +F ENF +DWKKILGKNH IQ EDCDF PIYEWHQ
Sbjct: 425 AAMLDTDYMNKPRFKENFFSDWKKILGKNHTIQNLEDCDFGPIYEWHQQEKEKKKQMTTE 484
Query: 1564 XXXXXXXXXXXXXXXXMWAVLDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKRRIRPSDI 1385
MWA++DGVKEKVGNFRVEPPGLFRGRGEHPK+GKLK+RIRP DI
Sbjct: 485 EKKALKEERLQLEEKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKVGKLKKRIRPRDI 544
Query: 1384 TINIGKGAPIPECPIPGERWREVRHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSD 1205
TINIGK APIPECPIPGERW+EVR+DNTVTWLA+WNDP+N KE KYVFLAASS+LKGQSD
Sbjct: 545 TINIGKDAPIPECPIPGERWKEVRNDNTVTWLAYWNDPVNLKECKYVFLAASSTLKGQSD 604
Query: 1204 KEKYEKSRTLKNYIEGIRTAYTRDFTN-KDVTKRQIAVATYLIDKLALRAGNEKDDDEAD 1028
KEKYEK+R LK+YI GIR AYT+DFTN KD K+Q+AVATYLIDKLALRAGNEKDDDEAD
Sbjct: 605 KEKYEKARLLKDYIHGIRAAYTKDFTNNKDPMKKQVAVATYLIDKLALRAGNEKDDDEAD 664
Query: 1027 TVGCCTLKVENVTLVPPNKLEFDFLGKDSIRXXXXXXXXXXXYKAIGEFQKGKRGSDDLF 848
TVGCCTLKVENV VPPN L+ DF+GKDSIR +KAI +F+ GK GS+DLF
Sbjct: 665 TVGCCTLKVENVEPVPPNILKIDFIGKDSIRYQNEVQVEPAVFKAIQQFRSGKEGSEDLF 724
Query: 847 DELDTSKLNTHLKELMPGLTAKVFRTYNASITLDEMLSRDTKDGDVPEKIVVYNAANKEV 668
D LDTSKLN HLKELMPGLTAKVFRTYNASITLD+MLS++TK G V EK+ VY ANKEV
Sbjct: 725 DRLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDMLSKETKGGKVAEKVGVYQRANKEV 784
Query: 667 AIICNHQRTISKSHAAQMTRLTEKMNELKGVLEELETDLARARKGKPPLKDADGKQKRNL 488
AIICNHQRT+SKSH+AQM+RL EK++ELK LEEL+TDL+RA+KGKPP K DG+ KRNL
Sbjct: 785 AIICNHQRTVSKSHSAQMSRLNEKIDELKTALEELKTDLSRAKKGKPPSKGDDGEPKRNL 844
Query: 487 TPEALERKIAQTNAKIEKTERDMNTKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEK 308
PEALERKIAQTNAKIEK ERD TKEDLK VAL TSKI+YLDPRITVAWCKR EVPIEK
Sbjct: 845 NPEALERKIAQTNAKIEKMERDKKTKEDLKAVALSTSKISYLDPRITVAWCKRQEVPIEK 904
Query: 307 IFNKSLLAKFSWAMDVDPDFRF 242
+FNKSLLAKF+WAMDVDP FRF
Sbjct: 905 MFNKSLLAKFAWAMDVDPSFRF 926
>ref|XP_006364175.1| PREDICTED: LOW QUALITY PROTEIN: DNA topoisomerase 1-like [Solanum
tuberosum]
Length = 905
Score = 982 bits (2538), Expect = 0.0
Identities = 537/957 (56%), Positives = 642/957 (67%), Gaps = 9/957 (0%)
Frame = -2
Query: 3085 MAVQACVQSNML---DDDDDEPLVFKRS-TASKQNQLNSEIKKSLPPKNAGSSGRQVPDV 2918
MAV+A ++N++ DDDDD PLVFKRS T SKQNQ NS +K G SGRQVPDV
Sbjct: 1 MAVEAFAKTNLMEDIDDDDDMPLVFKRSSTTSKQNQSNSSSQKQ-----DGRSGRQVPDV 55
Query: 2917 QSPNGQRSSSQKGKTVPSAKPSGVKPSMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 2738
+SPNGQ SS+ K KT S+K S +
Sbjct: 56 RSPNGQSSSTHKVKTAASSKASPAVSPLTSPKAAPLSSRTSP------------------ 97
Query: 2737 XXXXXXXSGVKSSTASPEVSSLSANASPVKSSLA-NSKGLPSSANQLNHSSKQNSSIVKE 2561
+ SP +S + A ++S A NS+ S+ NQ + ++Q++ KE
Sbjct: 98 ---------APNFRTSPAPNSRTPPAPNSRTSPAPNSRPSSSAGNQAKNVNQQSNIAPKE 148
Query: 2560 EKHSVKHXXXXXXXXXXXXXXXPLSVRISAGLSKGSNNHANKGLSTNNPHPSQSQKPNIN 2381
K +++ PLS R+ +GLSK ++ HAN L T+ Q +P
Sbjct: 149 SKQAIEPKSEPNDEAEDSEDDKPLSARVPSGLSKSNSIHANNVLGTSTS--VQKSRPP-- 204
Query: 2380 IKNEESDDDDEMPLSSRFXXXXXXXXXXXXXXSDEKKPMASKLQQNGSTMRDDQRKSPPV 2201
++ D DDE+PL+SRF S E+ + K++QNG S V
Sbjct: 205 ---KKEDSDDEIPLASRFQMKSSAGASTSKFSSSEE--VKPKIRQNGLP-------SATV 252
Query: 2200 FNKRPLDXXXXXXXXXXXXXKLSGASQPIKNNQVSIKAEPKAEDDD-HVPIAQRIKK--- 2033
+KRP + S+K E K EDDD VP++QRIKK
Sbjct: 253 LSKRPPGEVSLLLRLQLKSLDFLMHLHLFLVSNXSVKTEKKTEDDDDEVPLSQRIKKAVA 312
Query: 2032 SASSDGKSLSANQKAPXXXXXXXXXXXXXXXXXXXXXXXXXXXKMQPSSGEGQKWTTLVH 1853
SAS+ +S+ +KA +QPSSG+GQKWTTL H
Sbjct: 313 SASASASKVSSVKKATKVVSSSMKKTKKKLKKPKYSKSSK----LQPSSGDGQKWTTLEH 368
Query: 1852 NGVIFPPPYKPHGVKMLYKGKPVDLTPEQEEVATMFAVMIDTDYAKKEKFIENFMTDWKK 1673
NGVIFPPPYKPHGVKMLYKGKPVDLTPEQEEVATM+AVM+DT+Y K++F ENFM DW+K
Sbjct: 369 NGVIFPPPYKPHGVKMLYKGKPVDLTPEQEEVATMYAVMLDTEYLTKQQFKENFMNDWRK 428
Query: 1672 ILGKNHIIQKFEDCDFRPIYEWHQAXXXXXXXXXXXXXXXXXXXXXXXXXXXMWAVLDGV 1493
ILGKNH+IQK E+C+F PIYEWHQ+ MWA++DGV
Sbjct: 429 ILGKNHVIQKLEECNFTPIYEWHQSEKEKKKQMSSEEKKALREEKLKQEEKYMWAIVDGV 488
Query: 1492 KEKVGNFRVEPPGLFRGRGEHPKMGKLKRRIRPSDITINIGKGAPIPECPIPGERWREVR 1313
KEKVGNFRVEPPGLFRGRGEHPKMGKLKRRIRP+DITINIGKG P+PECPIPG+RW+EVR
Sbjct: 489 KEKVGNFRVEPPGLFRGRGEHPKMGKLKRRIRPNDITINIGKGVPVPECPIPGQRWKEVR 548
Query: 1312 HDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKSRTLKNYIEGIRTAYTRD 1133
HDNTVTWLAFWNDPINP+EFKYVFLAASSSLKGQSDKEKYEK+R LK+YIEGIR+AYT+D
Sbjct: 549 HDNTVTWLAFWNDPINPREFKYVFLAASSSLKGQSDKEKYEKARRLKDYIEGIRSAYTKD 608
Query: 1132 FTNKDVTKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVTLVPPNKLEFDFL 953
FT+KD KRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENV VPPN L+FDFL
Sbjct: 609 FTSKDPVKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPNILKFDFL 668
Query: 952 GKDSIRXXXXXXXXXXXYKAIGEFQKGKRGSDDLFDELDTSKLNTHLKELMPGLTAKVFR 773
GKDSIR +KAI +F+ GK+G DDLFD+LDTSKLN HLKELMPGLTAKVFR
Sbjct: 669 GKDSIRYQNEVAVYEPVFKAIQQFRSGKKGGDDLFDKLDTSKLNAHLKELMPGLTAKVFR 728
Query: 772 TYNASITLDEMLSRDTKDGDVPEKIVVYNAANKEVAIICNHQRTISKSHAAQMTRLTEKM 593
TYNAS TL++ L++ T+ G++ +K+ VYN ANKEVAIICNHQRT+SKSH+ Q++RL EK+
Sbjct: 729 TYNASFTLEQQLTKLTQGGELADKVAVYNVANKEVAIICNHQRTVSKSHSVQISRLNEKI 788
Query: 592 NELKGVLEELETDLARARKGKPPLKDADGKQKRNLTPEALERKIAQTNAKIEKTERDMNT 413
+ELK +LEE + DLARA+KGKPP+K ADGK KRNLTPEAL++KI QTN KI+ ER + T
Sbjct: 789 DELKAILEEFKVDLARAKKGKPPVKGADGKAKRNLTPEALQKKIDQTNVKIDNIERQIET 848
Query: 412 KEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFSWAMDVDPDFRF 242
KE+LKTVALGTSKINYLDPRITVAWCKRHEVPIEK+FNKSLLAKF+WAMDV+P F F
Sbjct: 849 KEELKTVALGTSKINYLDPRITVAWCKRHEVPIEKMFNKSLLAKFAWAMDVEPSFTF 905
>dbj|BAK32956.1| topoisomerase I [Ophiorrhiza fucosa]
Length = 926
Score = 981 bits (2536), Expect = 0.0
Identities = 555/984 (56%), Positives = 634/984 (64%), Gaps = 36/984 (3%)
Frame = -2
Query: 3085 MAVQACVQSNMLDD--DDDEPLVFKRST-ASKQNQLNSEIKKSLPPKNAGSSGRQVPDVQ 2915
MAV+AC +N+++D DD+ P++FKRS ASKQNQ NSE KK K+ G S DV+
Sbjct: 1 MAVEACTTTNLMEDMEDDEGPVIFKRSNPASKQNQANSEKKKLSLQKHVGQSAVHTSDVR 60
Query: 2914 SPNGQRSSSQKGKTVPSAKPSGVKPSMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 2735
NG+ SS+QKG+ PSA+ V
Sbjct: 61 PANGESSSAQKGRIQPSAETPPV------------------------------------- 83
Query: 2734 XXXXXXSGVKSSTASPEVSSLSANASPVKSSLANSK---GLPSSANQLNHSSKQNSSIVK 2564
KS +SP+ S+ SA ASP+ S ANSK S+A Q NH ++S+
Sbjct: 84 ---------KSPLSSPKASNSSAKASPITSPGANSKLSASATSTAKQQNHH--KSSAAFI 132
Query: 2563 EEKHSVKHXXXXXXXXXXXXXXXPLSVRISAGLSKGSNNHANK--GLSTNNPHPSQSQKP 2390
E K SV PL R S SKG +NHANK G S + P
Sbjct: 133 EPKPSVP-PAKANSNSESSDDEKPLIARTSGCSSKGKSNHANKEGGDSCSIRRP------ 185
Query: 2389 NINIKNEESDDDDEMPLSSRFXXXXXXXXXXXXXXS-DEKKPMASKLQQNGSTMRDD-QR 2216
+ E D +DE PLS RF DEKKP+A+K+QQNGS RD
Sbjct: 186 ---VVEESEDSEDEKPLSRRFPSKSSLGESTSKSYDSDEKKPLAAKVQQNGSASRDGPMN 242
Query: 2215 KSPPVFNKRPLDXXXXXXXXXXXXXKLSGASQPIKNNQVSIKAEPKAEDDD--------- 2063
KS + NKR KLS I N Q ++K EPKAEDDD
Sbjct: 243 KSASLSNKRAPGEVKSLNQSSLKKPKLSSPITSISNKQAAVKPEPKAEDDDDNIPLSQRG 302
Query: 2062 ----------------HVPIAQRIKKSASSDGKSLSANQKAPXXXXXXXXXXXXXXXXXX 1931
+ PI+QRIKKS +S KS + +KA
Sbjct: 303 KKSQTAASKPKDEDDDNAPISQRIKKSPASVSKSSAPVKKASTVVSPSLKKVNKKSKKVI 362
Query: 1930 XXXXXXXXXKMQPSSGEGQKWTTLVHNGVIFPPPYKPHGVKMLYKGKPVDLTPEQEEVAT 1751
K+ P SGEGQKWTTLVHNGV+FPPPYKPHGVKMLYK +P+ LTPEQEEVAT
Sbjct: 363 KKTAYTKSSKVPPGSGEGQKWTTLVHNGVMFPPPYKPHGVKMLYKRQPLTLTPEQEEVAT 422
Query: 1750 MFAVMIDTDYAKKEKFIENFMTDWKKILGKNHIIQKFEDCDFRPIYEWHQAXXXXXXXXX 1571
MFA M+DTDY K +F ENF +DWKKILGKNH IQ EDCDF PIYEWHQ
Sbjct: 423 MFAAMLDTDYMNKPRFKENFFSDWKKILGKNHTIQNLEDCDFGPIYEWHQQEREKKKQMT 482
Query: 1570 XXXXXXXXXXXXXXXXXXMWAVLDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKRRIRPS 1391
MWA++DGVKEKVGNFRVEPPGLFRGRGEHPK+GKLK+RI P
Sbjct: 483 TEEKKALKDERLQLEEKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKVGKLKKRIHPR 542
Query: 1390 DITINIGKGAPIPECPIPGERWREVRHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQ 1211
DITINIGK APIPECPIPGERW+EVR+DNTVTWLA+WNDP+N KE KYVFLA SS+LKGQ
Sbjct: 543 DITINIGKDAPIPECPIPGERWKEVRNDNTVTWLAYWNDPVNLKECKYVFLAPSSTLKGQ 602
Query: 1210 SDKEKYEKSRTLKNYIEGIRTAYTRDFTN-KDVTKRQIAVATYLIDKLALRAGNEKDDDE 1034
SDKEKYEK+R LK+YI GIR AYT+DFTN KD K+QIAVATYLIDKLALRAGNEKDDDE
Sbjct: 603 SDKEKYEKARLLKDYIHGIRAAYTKDFTNNKDPMKKQIAVATYLIDKLALRAGNEKDDDE 662
Query: 1033 ADTVGCCTLKVENVTLVPPNKLEFDFLGKDSIRXXXXXXXXXXXYKAIGEFQKGKRGSDD 854
ADTVGCCTLKVENV VPPN L+ DF+GKDSIR +KAI +F+ GK GS+D
Sbjct: 663 ADTVGCCTLKVENVEPVPPNILKIDFIGKDSIRYQNEVQVEPAVFKAIQQFRSGKEGSED 722
Query: 853 LFDELDTSKLNTHLKELMPGLTAKVFRTYNASITLDEMLSRDTKDGDVPEKIVVYNAANK 674
LFD LDTSKLN HLKELMPGLTAKVFRTYNASITLD+MLS++TK G V EK+ VY ANK
Sbjct: 723 LFDRLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDMLSKETKGGKVAEKVGVYQHANK 782
Query: 673 EVAIICNHQRTISKSHAAQMTRLTEKMNELKGVLEELETDLARARKGKPPLKDADGKQKR 494
EVAIICNHQRT+SKSH+AQM+RL EK++ELK LEEL+TDL+RA+KGKPP K DG+ KR
Sbjct: 783 EVAIICNHQRTVSKSHSAQMSRLNEKIDELKTALEELKTDLSRAKKGKPPSKGDDGEPKR 842
Query: 493 NLTPEALERKIAQTNAKIEKTERDMNTKEDLKTVALGTSKINYLDPRITVAWCKRHEVPI 314
NL PEALERKIAQTNAKIEK ERD TKEDLK VAL TSKI+YLDPRITVAWCKR EVPI
Sbjct: 843 NLNPEALERKIAQTNAKIEKMERDKKTKEDLKAVALSTSKISYLDPRITVAWCKRQEVPI 902
Query: 313 EKIFNKSLLAKFSWAMDVDPDFRF 242
EK+FNKSLLAKF+WAMDVDP FRF
Sbjct: 903 EKMFNKSLLAKFAWAMDVDPSFRF 926
>ref|XP_002266885.1| PREDICTED: DNA topoisomerase 1 [Vitis vinifera]
gi|296082698|emb|CBI21703.3| unnamed protein product
[Vitis vinifera]
Length = 857
Score = 980 bits (2533), Expect = 0.0
Identities = 519/759 (68%), Positives = 572/759 (75%), Gaps = 9/759 (1%)
Frame = -2
Query: 2491 LSVRISAGLSKGSNNHANKGLSTNNPHPSQSQKPNINIKNEESDDDDEMPLSSRFXXXXX 2312
LSVR+S+GL KG + N GL + K E+ DDDD++PLSS+F
Sbjct: 121 LSVRLSSGLPKGKGSSNNVGLGRGGVGGVK--------KEEDDDDDDKIPLSSKFQLKS- 171
Query: 2311 XXXXXXXXXSDEKKPMASKLQQNGSTMRDDQRKSPPVFNK-RPLDXXXXXXXXXXXXXK- 2138
DEKKP+ K+ QNG T D + KSP V NK RPLD K
Sbjct: 172 ----------DEKKPLPLKVNQNGGT--DKRDKSPTVLNKKRPLDGVNSSLGQSSLVKKP 219
Query: 2137 -LSGAS-QPIKNNQVSIKAEPKAEDDDH--VPIAQRIKKS-ASSDGKSLSANQKAP--XX 1979
+SG S QP K + KAEPK EDDD +PI+QR+KKS ASS K + A QK
Sbjct: 220 KISGQSAQPFKVTHATAKAEPKVEDDDDDDMPISQRMKKSGASSGNKPVPAKQKVTKVVS 279
Query: 1978 XXXXXXXXXXXXXXXXXXXXXXXXXKMQPSSGEGQKWTTLVHNGVIFPPPYKPHGVKMLY 1799
K+ PSSGEGQKWTTLVHNGVIFPPPYKPHGVKMLY
Sbjct: 280 STSFKKTKDIKSKKMEKNSKYSKSTKVPPSSGEGQKWTTLVHNGVIFPPPYKPHGVKMLY 339
Query: 1798 KGKPVDLTPEQEEVATMFAVMIDTDYAKKEKFIENFMTDWKKILGKNHIIQKFEDCDFRP 1619
KGKPVDLTPEQEEVATMFAVM+DTDY +KEKF ENFM DW+KILGKNH+IQ+ +DCDF P
Sbjct: 340 KGKPVDLTPEQEEVATMFAVMLDTDYMQKEKFKENFMADWRKILGKNHVIQRLDDCDFTP 399
Query: 1618 IYEWHQAXXXXXXXXXXXXXXXXXXXXXXXXXXXMWAVLDGVKEKVGNFRVEPPGLFRGR 1439
IYEWHQ MWA++DGVKEKVGNFRVEPPGLFRGR
Sbjct: 400 IYEWHQEEKEKKKQMSTEEKKTLKEEKLKLEEKYMWAIVDGVKEKVGNFRVEPPGLFRGR 459
Query: 1438 GEHPKMGKLKRRIRPSDITINIGKGAPIPECPIPGERWREVRHDNTVTWLAFWNDPINPK 1259
GEHPKMGKLKRRI PSDITINIGK + IPECPIPGE W+EV+HDNTVTWLAFWNDPINPK
Sbjct: 460 GEHPKMGKLKRRIHPSDITINIGKNSQIPECPIPGESWKEVKHDNTVTWLAFWNDPINPK 519
Query: 1258 EFKYVFLAASSSLKGQSDKEKYEKSRTLKNYIEGIRTAYTRDFTNKDVTKRQIAVATYLI 1079
EFKYVFLAASSSLKGQSDKEKYEK+R LKNYI+ IR YT+DF +KD+TKRQIAVATYLI
Sbjct: 520 EFKYVFLAASSSLKGQSDKEKYEKARKLKNYIKDIRATYTKDFVSKDITKRQIAVATYLI 579
Query: 1078 DKLALRAGNEKDDDEADTVGCCTLKVENVTLVPPNKLEFDFLGKDSIRXXXXXXXXXXXY 899
DKLALRAGNEKDDDEADTVGCCTLKVENV PPN L+FDFLGKDSIR Y
Sbjct: 580 DKLALRAGNEKDDDEADTVGCCTLKVENVIPEPPNSLQFDFLGKDSIRYEKTVEVELPVY 639
Query: 898 KAIGEFQKGKRGSDDLFDELDTSKLNTHLKELMPGLTAKVFRTYNASITLDEMLSRDTKD 719
KAI +F+ GK GSDDLFD+LDTSKLN HLKELMPGLTAKVFRTYNASITLDEML++DTK+
Sbjct: 640 KAIEQFRVGKSGSDDLFDKLDTSKLNAHLKELMPGLTAKVFRTYNASITLDEMLNKDTKE 699
Query: 718 GDVPEKIVVYNAANKEVAIICNHQRTISKSHAAQMTRLTEKMNELKGVLEELETDLARAR 539
GDV +K+VVY ANKEVAIICNHQRTISKSH AQMTRLTEK++E+KGVL L+TDLARA+
Sbjct: 700 GDVAQKVVVYQHANKEVAIICNHQRTISKSHTAQMTRLTEKIDEMKGVLNGLKTDLARAK 759
Query: 538 KGKPPLKDADGKQKRNLTPEALERKIAQTNAKIEKTERDMNTKEDLKTVALGTSKINYLD 359
KGKPPLKDADGK +RNLTPEALERKIAQTNAKIEK ERD +TKEDLKTVALGTSKINYLD
Sbjct: 760 KGKPPLKDADGK-RRNLTPEALERKIAQTNAKIEKMERDKDTKEDLKTVALGTSKINYLD 818
Query: 358 PRITVAWCKRHEVPIEKIFNKSLLAKFSWAMDVDPDFRF 242
PRI+VAWCKR EVPIEK+FNKSLLAKF+WAMDV PDFRF
Sbjct: 819 PRISVAWCKRQEVPIEKVFNKSLLAKFAWAMDVPPDFRF 857
>ref|XP_002265386.1| PREDICTED: DNA topoisomerase 1-like [Vitis vinifera]
Length = 883
Score = 978 bits (2528), Expect = 0.0
Identities = 524/832 (62%), Positives = 586/832 (70%), Gaps = 9/832 (1%)
Frame = -2
Query: 2710 VKSSTASPEVSSLSANASPVKSSLANSKGLPSSANQLNHSSKQNSSIVKEEKHSVKHXXX 2531
VK S E ++ P+K+ + +S G + LN S SS E K VK
Sbjct: 58 VKKSDGDSEDEVPLSSKFPLKTYVRSSSGKSLGSKGLNSPSL--SSHPPETKVGVKESSD 115
Query: 2530 XXXXXXXXXXXXPLSVRISAGLSKGSNNHANKGLSTNNPHPSQSQKPNINIKNEESDDDD 2351
L R A SK ++ KGLS+ QSQK +N KN D +D
Sbjct: 116 DSEDEIPLLLKLQLKSRKGASSSKLLDS---KGLSSPASSRPQSQKAKVNNKNLSDDSED 172
Query: 2350 EMPLSSRFXXXXXXXXXXXXXXS-DEKKPMASKLQQNGSTMRDDQR-KSPPVFNKRPLDX 2177
E+PLSS+F + DEKKP+ S L+ NG + +DD+R KSP NKRPL
Sbjct: 173 EIPLSSKFRLKTGMGASLDKLDNFDEKKPLTSTLKPNGISKKDDERVKSPKGQNKRPLGQ 232
Query: 2176 XXXXXXXXXXXXKLSGASQPIKNNQVSIKAEPKAEDDD-------HVPIAQRIKKSASSD 2018
KL S K QVS+KAE K +DDD + P +R+KKS SSD
Sbjct: 233 ANTSHHSSSKKPKLLDGSVKGKVKQVSVKAEQKDDDDDDNDDDDEYTPTVKRLKKSVSSD 292
Query: 2017 GKSLSANQKAPXXXXXXXXXXXXXXXXXXXXXXXXXXXKMQPSSGEGQKWTTLVHNGVIF 1838
K S + P + P+SGEGQKWTTL HNGVIF
Sbjct: 293 NKKASKTKVIPSSRKKATKKAKKSKKLAKSSKYSKSTK-VPPNSGEGQKWTTLEHNGVIF 351
Query: 1837 PPPYKPHGVKMLYKGKPVDLTPEQEEVATMFAVMIDTDYAKKEKFIENFMTDWKKILGKN 1658
PPPYKPHGVKMLY G+PVDLTPEQEEVATMFAVM DTDYA K +FIENFM DW+ LGKN
Sbjct: 352 PPPYKPHGVKMLYNGRPVDLTPEQEEVATMFAVMKDTDYATKPRFIENFMNDWRVRLGKN 411
Query: 1657 HIIQKFEDCDFRPIYEWHQAXXXXXXXXXXXXXXXXXXXXXXXXXXXMWAVLDGVKEKVG 1478
H+I+KFE CDF PIYEWH+ MWAV+DGVKEKVG
Sbjct: 412 HVIKKFELCDFTPIYEWHEKEKEKKKQMTTEEKKALKEEKLKQEDKYMWAVVDGVKEKVG 471
Query: 1477 NFRVEPPGLFRGRGEHPKMGKLKRRIRPSDITINIGKGAPIPECPIPGERWREVRHDNTV 1298
NFRVEPPGLFRGRGEHPKMGKLK+RI PSDITINIGK AP+PECPIPGERW+EVRHDNTV
Sbjct: 472 NFRVEPPGLFRGRGEHPKMGKLKKRICPSDITINIGKEAPVPECPIPGERWKEVRHDNTV 531
Query: 1297 TWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKSRTLKNYIEGIRTAYTRDFTNKD 1118
TWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEK+R LK+YI+ IR YT+DFTNKD
Sbjct: 532 TWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARLLKDYIQNIRATYTKDFTNKD 591
Query: 1117 VTKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVTLVPPNKLEFDFLGKDSI 938
KRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENV LVPPNKLEFDFLGKDSI
Sbjct: 592 TMKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVALVPPNKLEFDFLGKDSI 651
Query: 937 RXXXXXXXXXXXYKAIGEFQKGKRGSDDLFDELDTSKLNTHLKELMPGLTAKVFRTYNAS 758
R YKAIG+F+ GK G DDLFD+LDTSKLN HLKELMPGLTAKVFRTYNAS
Sbjct: 652 RYFNTVEVELPVYKAIGQFKTGKSGGDDLFDKLDTSKLNAHLKELMPGLTAKVFRTYNAS 711
Query: 757 ITLDEMLSRDTKDGDVPEKIVVYNAANKEVAIICNHQRTISKSHAAQMTRLTEKMNELKG 578
ITLDEML+R+ + GD EKIV+Y ANKEVAIICNHQR++SKSH QM+RL+EKM EL+G
Sbjct: 712 ITLDEMLNREARGGDAMEKIVIYQHANKEVAIICNHQRSVSKSHDVQMSRLSEKMRELQG 771
Query: 577 VLEELETDLARARKGKPPLKDADGKQKRNLTPEALERKIAQTNAKIEKTERDMNTKEDLK 398
VL+EL+TDLARA+KGKPPLKD+DGK K+N+TPE LERKIAQTN KIEK ERDM TKEDLK
Sbjct: 772 VLDELKTDLARAKKGKPPLKDSDGKPKKNMTPEVLERKIAQTNTKIEKMERDMKTKEDLK 831
Query: 397 TVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFSWAMDVDPDFRF 242
TVALGTSKINYLDPRI+VAWCKR EVPIEKIFNKSLLAKF+WAMDVDP FRF
Sbjct: 832 TVALGTSKINYLDPRISVAWCKRQEVPIEKIFNKSLLAKFAWAMDVDPSFRF 883