BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia25_contig00003270
         (1762 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285089.1| PREDICTED: uncharacterized protein LOC100266...   779   0.0  
ref|XP_007013390.1| RNA polymerase II transcription mediators is...   765   0.0  
ref|XP_004300164.1| PREDICTED: mediator of RNA polymerase II tra...   733   0.0  
ref|XP_007204608.1| hypothetical protein PRUPE_ppa002594mg [Prun...   731   0.0  
ref|XP_006475818.1| PREDICTED: mediator of RNA polymerase II tra...   729   0.0  
ref|XP_006450970.1| hypothetical protein CICLE_v10007689mg [Citr...   727   0.0  
ref|XP_007013393.1| RNA polymerase II transcription mediators is...   722   0.0  
gb|EXB54541.1| hypothetical protein L484_006289 [Morus notabilis]     705   0.0  
ref|XP_006374395.1| hypothetical protein POPTR_0015s06780g [Popu...   702   0.0  
ref|XP_004251571.1| PREDICTED: mediator of RNA polymerase II tra...   701   0.0  
ref|XP_006364902.1| PREDICTED: mediator of RNA polymerase II tra...   697   0.0  
ref|XP_007013392.1| RNA polymerase II transcription mediators is...   676   0.0  
ref|XP_004141551.1| PREDICTED: mediator of RNA polymerase II tra...   676   0.0  
ref|XP_003525658.1| PREDICTED: mediator of RNA polymerase II tra...   667   0.0  
ref|XP_007154971.1| hypothetical protein PHAVU_003G161800g [Phas...   664   0.0  
ref|XP_003549778.1| PREDICTED: mediator of RNA polymerase II tra...   658   0.0  
ref|XP_006400585.1| hypothetical protein EUTSA_v10012923mg [Eutr...   645   0.0  
ref|XP_003609292.1| hypothetical protein MTR_4g114100 [Medicago ...   632   e-178
ref|XP_004508515.1| PREDICTED: mediator of RNA polymerase II tra...   631   e-178
ref|NP_197517.3| RNA polymerase II transcription mediator [Arabi...   622   e-175

>ref|XP_002285089.1| PREDICTED: uncharacterized protein LOC100266409 [Vitis vinifera]
            gi|147821405|emb|CAN63500.1| hypothetical protein
            VITISV_011675 [Vitis vinifera]
            gi|297738929|emb|CBI28174.3| unnamed protein product
            [Vitis vinifera]
          Length = 660

 Score =  779 bits (2011), Expect = 0.0
 Identities = 404/581 (69%), Positives = 462/581 (79%), Gaps = 36/581 (6%)
 Frame = +3

Query: 3    HQELSVIIDLINTVEANDVVTVAGMTKPKPLPNETLSDLAVSAATKLHCFRHLGKYFKQS 182
            HQELSVIIDLI+TVEAND VTVA MT+PKPLPNE LSDL VSAATKL CFRHL KYFKQS
Sbjct: 82   HQELSVIIDLISTVEANDAVTVASMTRPKPLPNEVLSDLGVSAATKLQCFRHLSKYFKQS 141

Query: 183  AKALEQKIGREARFYGSLIRLQQNWKVKRQRLAASAPGNEGFTIDLYDNSLYDPAVVIRP 362
            AKALEQ+I REARFYG+LIRLQQNWKVKRQR+AASAPGNEGF+IDL+ NSL+DP  V RP
Sbjct: 142  AKALEQQIAREARFYGALIRLQQNWKVKRQRVAASAPGNEGFSIDLFSNSLHDPVAVFRP 201

Query: 363  S-MSIVRVDHDSAGMLAVRLPPNSCRSLHFGFFGAH------------SQFSVEYSSKET 503
            S +S VRVDHDSAGMLAV LPPNSCR+LHFGF G H            +    E  SKE 
Sbjct: 202  SSLSTVRVDHDSAGMLAVHLPPNSCRALHFGFLGGHLGNIPKEPSKTKTYGPDELPSKEI 261

Query: 504  KKDSPSDDDECVKETHSILREVHQAIFAEQVFDLVNREAFSPSIGVNVTGIRENYLQLSV 683
            KK  P  D+ECVKETHS+LRE HQAIF EQVFDLVNREAF+ S GVNVTGIRENYLQL++
Sbjct: 262  KK--PLSDNECVKETHSVLREGHQAIFDEQVFDLVNREAFNSSSGVNVTGIRENYLQLNI 319

Query: 684  GQEASVFILLMASGKDGENDDKADTQKLETAVLPSD--DEVKLVE------VKKSAFPNR 839
            GQ ASVF+ L+ SG+D +  D    Q LE+A+LP D  D VKL +       KKS FPNR
Sbjct: 320  GQGASVFMSLVPSGQDEKTADGMGMQNLESAILPMDTFDGVKLSDGKHDNDKKKSGFPNR 379

Query: 840  ISFEIYLQQIFHEHAFVRGKDKTIPSGRGQSTKE---EKFGLLGHFCMSLSHRIFSNKVV 1010
            IS EIYL+Q+FHEH FVR KDK I +GR Q + +   + FGLLGHFCMSL+HRIFS+KV+
Sbjct: 380  ISSEIYLKQLFHEHVFVRAKDKHISAGRTQPSSQPAKDGFGLLGHFCMSLAHRIFSSKVL 439

Query: 1011 TELESLVCWVPYLHLITHPTWHSRTSSWTLSMKVPQSILH------------MKNAIKSQ 1154
             ELE+LV  VPYLHL++HPTWHSRTSSWTL MKVP+S  H            +KN IK+ 
Sbjct: 440  MELENLVSRVPYLHLLSHPTWHSRTSSWTLLMKVPESSFHPGCQTRTSDIHNVKNIIKTH 499

Query: 1155 FRTKVVVTDDSISVEGEGGPNVVGLFKTFSEDMCSMNKYECDLADLPVTLLQQVASQVIR 1334
            FRTKVV+ DD I+VEG+G PNVVGLFK  SED+CSMN+Y+CDLAD+PV LLQQVASQVIR
Sbjct: 500  FRTKVVINDDCINVEGDGAPNVVGLFKGSSEDVCSMNRYDCDLADIPVILLQQVASQVIR 559

Query: 1335 WLHEEALMVGIKASRDFLCLSFEVAQGEMISLVAHVDPKDERGYISWWLVMEDGFAEERK 1514
            WLHEEAL VGIKA+RDFLCLSFE+ QGEM+SLVAHV+P D +G ISWWLVM+DGF+E+ K
Sbjct: 560  WLHEEALKVGIKANRDFLCLSFEMDQGEMLSLVAHVNPDDPQGCISWWLVMDDGFSEDLK 619

Query: 1515 IRADIFEGGLEYRKFLGYPNLELLYSTLMDLVSMCNGGGNH 1637
               D  +GG EYRKFLG+ +LE+LYSTLMDLVS+CNGGG H
Sbjct: 620  FHTDAPDGGSEYRKFLGHLSLEVLYSTLMDLVSLCNGGGRH 660


>ref|XP_007013390.1| RNA polymerase II transcription mediators isoform 1 [Theobroma cacao]
            gi|590578008|ref|XP_007013391.1| RNA polymerase II
            transcription mediators isoform 1 [Theobroma cacao]
            gi|508783753|gb|EOY31009.1| RNA polymerase II
            transcription mediators isoform 1 [Theobroma cacao]
            gi|508783754|gb|EOY31010.1| RNA polymerase II
            transcription mediators isoform 1 [Theobroma cacao]
          Length = 663

 Score =  765 bits (1975), Expect = 0.0
 Identities = 396/581 (68%), Positives = 467/581 (80%), Gaps = 36/581 (6%)
 Frame = +3

Query: 3    HQELSVIIDLINTVEANDVVTVAGMTKPKPLPNETLSDLAVSAATKLHCFRHLGKYFKQS 182
            HQELSVIIDLINTVEAND VTVAGMT+PKPLPNE LSDLAVSAATKL C+RHLGKYFKQS
Sbjct: 84   HQELSVIIDLINTVEANDAVTVAGMTRPKPLPNEVLSDLAVSAATKLQCYRHLGKYFKQS 143

Query: 183  AKALEQKIGREARFYGSLIRLQQNWKVKRQRLAASAPGNEGFTIDLYDNSLYDPAVVIRP 362
            AKALEQ+I REARFYG+LIRLQQNWKVKRQR+AA +  NEGFTIDL+DNSLYD A + RP
Sbjct: 144  AKALEQQIAREARFYGALIRLQQNWKVKRQRVAAPSSSNEGFTIDLFDNSLYDSATISRP 203

Query: 363  S-MSIVRVDHDSAGMLAVRLPPNSCRSLHFGFFGAHS------------QFSVEYSSKET 503
            S +S++ ++HDSAGMLA+ LP NSC SLHFGF G HS              SV+ +++++
Sbjct: 204  SSLSVIHIEHDSAGMLAINLPSNSCHSLHFGFLGVHSADIPKESSKIKTHGSVDQTTRDS 263

Query: 504  KKDSPSDDDECVKETHSILREVHQAIFAEQVFDLVNREAFSPSIGVNVTGIRENYLQLSV 683
            +K+S SDD E VKETH +LREVHQ+IF +QVFD+VNREAF+ S GVNVTGIRENYLQLS+
Sbjct: 264  QKESMSDD-ESVKETHLLLREVHQSIFNDQVFDMVNREAFNQSAGVNVTGIRENYLQLSI 322

Query: 684  GQEASVFILLMASGK-DGENDDKADTQKLETAVLPSD--DEVKLVE------VKKSAFPN 836
            GQ  S+FI L+ S K D +  D A+ Q LE+A++  D  D+VK  E       KK  FPN
Sbjct: 323  GQGTSLFISLVPSSKGDDQAVDTANAQNLESAIVSLDSFDDVKSGEGKHDITEKKWGFPN 382

Query: 837  RISFEIYLQQIFHEHAFVRGKDKTIPSGRGQSTKEEKFG--LLGHFCMSLSHRIFSNKVV 1010
            RIS EIYLQQI HEHAF++GKD+   SG   S +  K G  LLGHF +SL+HRIFSN+V+
Sbjct: 383  RISCEIYLQQIVHEHAFIKGKDRPNSSGTRVSGQSGKVGSGLLGHFSLSLAHRIFSNRVL 442

Query: 1011 TELESLVCWVPYLHLITHPTWHSRTSSWTLSMKVPQSILH------------MKNAIKSQ 1154
             +LE++VC VPYLHL+THPTWHSRTSSWT+ MKVPQSILH            MK+AIKSQ
Sbjct: 443  MKLENVVCRVPYLHLMTHPTWHSRTSSWTIFMKVPQSILHVESQSQKSDFQNMKDAIKSQ 502

Query: 1155 FRTKVVVTDDSISVEGEGGPNVVGLFKTFSEDMCSMNKYECDLADLPVTLLQQVASQVIR 1334
            FRTKVVV DD I+VEGEG PNVVGLFK  SED+CS+NKY+CDLADLPV +LQQVASQVIR
Sbjct: 503  FRTKVVVNDDRINVEGEGAPNVVGLFKRSSEDICSVNKYDCDLADLPVIILQQVASQVIR 562

Query: 1335 WLHEEALMVGIKASRDFLCLSFEVAQGEMISLVAHVDPKDERGYISWWLVMEDGFAEERK 1514
            WLHEEALMVGIK +RDFLCL+FE+ QGE +SLVAHVDP+D +G ISWWLVMEDGFAE+ K
Sbjct: 563  WLHEEALMVGIKTNRDFLCLTFELEQGETVSLVAHVDPEDIQGCISWWLVMEDGFAEDWK 622

Query: 1515 IRADIFEGGLEYRKFLGYPNLELLYSTLMDLVSMCNGGGNH 1637
            ++ D+ +G  EYRKFLG+ +L++LYSTLMDLVS+C GGGNH
Sbjct: 623  LQMDMSDGASEYRKFLGHLSLDVLYSTLMDLVSLCGGGGNH 663


>ref|XP_004300164.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            17-like [Fragaria vesca subsp. vesca]
          Length = 655

 Score =  733 bits (1893), Expect = 0.0
 Identities = 384/573 (67%), Positives = 445/573 (77%), Gaps = 29/573 (5%)
 Frame = +3

Query: 3    HQELSVIIDLINTVEANDVVTVAGMTKPKPLPNETLSDLAVSAATKLHCFRHLGKYFKQS 182
            HQELSVI+DLINTVEAND VTVA MT+P+P PNE LSDLAVSAATKL CFRHLGKYFKQS
Sbjct: 85   HQELSVIVDLINTVEANDAVTVASMTRPRPFPNEALSDLAVSAATKLQCFRHLGKYFKQS 144

Query: 183  AKALEQKIGREARFYGSLIRLQQNWKVKRQRLAASAPGNEGFTIDLYDNSLYDPAVVIRP 362
            A ALEQ++ REARFYG+LIRLQQNWKVKRQR  A A GNEGFTIDL+DNSLYDPA + RP
Sbjct: 145  ANALEQQMAREARFYGALIRLQQNWKVKRQRAVALASGNEGFTIDLFDNSLYDPAGIFRP 204

Query: 363  S-MSIVRVDHDSAGMLAVRLPPNSCRSLHFGFFGAHSQFSVEYSSKETKKDSPSD----- 524
            S +S V VDHDSAGMLA+ LPP S RSL FGF  A++  +   SSK TK  S SD     
Sbjct: 205  SPLSTVCVDHDSAGMLAINLPPKSYRSLRFGFISAYTDDTPTESSK-TKTQSSSDADKES 263

Query: 525  --DDECVKETHSILREVHQAIFAEQVFDLVNREAFSPSIGVNVTGIRENYLQLSVGQEAS 698
              DDECVKETHS+LREVHQAIF+EQVFDLVNREA + S+GVNVTGI+ENYLQL++ Q+ S
Sbjct: 264  VSDDECVKETHSLLREVHQAIFSEQVFDLVNREACNQSLGVNVTGIQENYLQLNIDQDTS 323

Query: 699  VFILLMASGKDGENDDKADTQKLETAVLPSD--DEVKLVE------VKKSAFPNRISFEI 854
            VFI L+ + +  E  D   TQ LE A+LP D  D + L E       KKS  PN+IS EI
Sbjct: 324  VFISLVPTNQGEETVDSPSTQNLENAILPLDTLDGLNLPEDKPDTPKKKSIIPNQISCEI 383

Query: 855  YLQQIFHEHAFVRGKDKTIPSG--RGQSTKEEKFGLLGHFCMSLSHRIFSNKVVTELESL 1028
            YL QIFH+H F++ KD+    G   GQ  KE   GLLGHFCMSL+HRIFSNKV+ ELE++
Sbjct: 384  YLLQIFHQHVFLKAKDRPTSGGGVSGQPAKEGS-GLLGHFCMSLAHRIFSNKVLMELENV 442

Query: 1029 VCWVPYLHLITHPTWHSRTSSWTLSMKVPQSILHM-----------KNAIKSQFRTKVVV 1175
            V  VPY+ L +HPTWHSRTSSWTL +K+PQSILH            K+  KSQF TKVVV
Sbjct: 443  VRGVPYMQLTSHPTWHSRTSSWTLVVKIPQSILHACQIRVSDSHHTKHVTKSQFHTKVVV 502

Query: 1176 TDDSISVEGEGGPNVVGLFKTFSEDMCSMNKYECDLADLPVTLLQQVASQVIRWLHEEAL 1355
            TDD I+++GEG PNVVGLFK  S+++CSMN+Y+CDLADL V +LQQVASQVIRWLHEEAL
Sbjct: 503  TDDCINIDGEGAPNVVGLFKGTSQEVCSMNRYDCDLADLSVIILQQVASQVIRWLHEEAL 562

Query: 1356 MVGIKASRDFLCLSFEVAQGEMISLVAHVDPKDERGYISWWLVMEDGFAEERKIRADIFE 1535
            MVG+KA+ DFLCLSFE+ QGE +SLVAHVDP+D  G ISWWLVMEDGF EERK+  DI +
Sbjct: 563  MVGLKANWDFLCLSFELEQGETLSLVAHVDPEDTEGCISWWLVMEDGFVEERKLNIDISD 622

Query: 1536 GGLEYRKFLGYPNLELLYSTLMDLVSMCNGGGN 1634
            G  E RKFLG+ +LE+LYST+MDLV +CNGG N
Sbjct: 623  GASESRKFLGHLSLEVLYSTMMDLVGLCNGGVN 655


>ref|XP_007204608.1| hypothetical protein PRUPE_ppa002594mg [Prunus persica]
            gi|462400139|gb|EMJ05807.1| hypothetical protein
            PRUPE_ppa002594mg [Prunus persica]
          Length = 654

 Score =  731 bits (1886), Expect = 0.0
 Identities = 390/575 (67%), Positives = 451/575 (78%), Gaps = 31/575 (5%)
 Frame = +3

Query: 3    HQELSVIIDLINTVEANDVVTVAGMTKPKPLPNETLSDLAVSAATKLHCFRHLGKYFKQS 182
            HQELSVIIDLINTVE ND VTVA MT+PKP  +E +SDLAVSAATKL CFRHLGKYFKQS
Sbjct: 84   HQELSVIIDLINTVETNDAVTVASMTRPKPFHDEVMSDLAVSAATKLQCFRHLGKYFKQS 143

Query: 183  AKALEQKIGREARFYGSLIRLQQNWKVKRQRLAASAPGNEGFTIDLYDNSLYDPAVVIRP 362
            AKALE+++ REARFYG+LIRLQQNWKVKRQR+AASA GNEGFTIDL+D+SLYDPA + RP
Sbjct: 144  AKALERQVAREARFYGALIRLQQNWKVKRQRVAASASGNEGFTIDLFDSSLYDPAAIFRP 203

Query: 363  S-MSIVRVDHDSAGMLAVRLPPNSCRSLHFGFFGAH--------SQFSVEYSSKETKKDS 515
            S +S VRVDHDSAGMLA+ LPPNS RSL FGF GA         SQ  +  SS E +K+S
Sbjct: 204  SSLSTVRVDHDSAGMLAINLPPNSYRSLQFGFLGADPGVSPIESSQTKIRLSS-EAEKES 262

Query: 516  PSDDDECVKETHSILREVHQAIFAEQVFDLVNREAFSPSIGVNVTGIRENYLQLSVGQEA 695
             SDD ECVKETHS+LREVHQAIF EQVFDLVNREAF+ S+GVNVTGI+ENYLQL++GQ  
Sbjct: 263  VSDD-ECVKETHSLLREVHQAIFDEQVFDLVNREAFNQSLGVNVTGIQENYLQLNIGQGT 321

Query: 696  SVFILLMASGKDGENDDKADTQKLETAVLPSD--DEVKLVE-----VKK-SAFPNRISFE 851
            SVFI L+ S +  +  D   TQ LE  +LP D  D ++L E     VKK S  P++IS E
Sbjct: 322  SVFISLVPS-RGEQTVDSPSTQNLENTILPLDTLDGLELAEDKPDTVKKTSLIPDQISCE 380

Query: 852  IYLQQIFHEHAFVRGKDKTIPSGR---GQSTKEEKFGLLGHFCMSLSHRIFSNKVVTELE 1022
            IYLQQIFH+H FV+ KD+   +G    GQ  KE   GLLGHFCMSL+HRIFSNKV+ ELE
Sbjct: 381  IYLQQIFHQHVFVKAKDRPTSAGARVSGQLAKEGP-GLLGHFCMSLAHRIFSNKVLKELE 439

Query: 1023 SLVCWVPYLHLITHPTWHSRTSSWTLSMKVPQSILH-----------MKNAIKSQFRTKV 1169
            ++V  VPYL L++HPTWHSRTSSW L +K+P+SILH           M+N  KSQF TKV
Sbjct: 440  NVVKGVPYLQLLSHPTWHSRTSSWMLFVKIPESILHACQTRTSDMRHMRNITKSQFHTKV 499

Query: 1170 VVTDDSISVEGEGGPNVVGLFKTFSEDMCSMNKYECDLADLPVTLLQQVASQVIRWLHEE 1349
            VVTDD I+VEGEG PNVVGLFK  SE++C MN+Y+CDLADLPV +LQQVASQVIRWLHEE
Sbjct: 500  VVTDDCINVEGEGAPNVVGLFKGNSEEICLMNRYDCDLADLPVIILQQVASQVIRWLHEE 559

Query: 1350 ALMVGIKASRDFLCLSFEVAQGEMISLVAHVDPKDERGYISWWLVMEDGFAEERKIRADI 1529
            ALMVGIKA+RDFLCLSFE+  GE +SLVAHVDP+D  G ISWWLV+  GF EERK+  D 
Sbjct: 560  ALMVGIKANRDFLCLSFELDLGETLSLVAHVDPEDGEGCISWWLVINGGFVEERKLSMDA 619

Query: 1530 FEGGLEYRKFLGYPNLELLYSTLMDLVSMCNGGGN 1634
             +G  E RKFLG+ +LE+LYSTLMDLVS+C G GN
Sbjct: 620  SDGASESRKFLGHLSLEVLYSTLMDLVSLCTGRGN 654


>ref|XP_006475818.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            17-like [Citrus sinensis]
          Length = 657

 Score =  729 bits (1881), Expect = 0.0
 Identities = 381/572 (66%), Positives = 444/572 (77%), Gaps = 27/572 (4%)
 Frame = +3

Query: 3    HQELSVIIDLINTVEANDVVTVAGMTKPKPLPNETLSDLAVSAATKLHCFRHLGKYFKQS 182
            HQELSVIIDLINTVEAND VTVAGMT+PK LPNE LSDL+VSAATKL C+RHLG YFKQS
Sbjct: 88   HQELSVIIDLINTVEANDAVTVAGMTRPKALPNEVLSDLSVSAATKLQCYRHLGIYFKQS 147

Query: 183  AKALEQKIGREARFYGSLIRLQQNWKVKRQRLAASAPGNEGFTIDLYDNSLYDPAVVIRP 362
            AK+LEQ+I +EARFYG+LIRLQQNWKVKRQR+AA A GNEGFTIDL+DNSLYD A V RP
Sbjct: 148  AKSLEQQIAKEARFYGALIRLQQNWKVKRQRVAAPASGNEGFTIDLFDNSLYDSAPVSRP 207

Query: 363  S-MSIVRVDHDSAGMLAVRLPPNSCRSLHFGFFGAHSQFSVEYSSKETKKDSPS------ 521
            S +S +R+DHDSAGMLA+ LPPNSCRS  FGF G  S  S +  SK     SP       
Sbjct: 208  SSLSTIRIDHDSAGMLAINLPPNSCRSFRFGFLGVQSGDSSKQCSKVKNSCSPRPSKEAK 267

Query: 522  ---DDDECVKETHSILREVHQAIFAEQVFDLVNREAFSPSIGVNVTGIRENYLQLSVGQE 692
               +DDECV+E HS+LREVHQAIF EQVFD+VNREAF  S+GVNVTGIRENYLQL +G  
Sbjct: 268  ESVNDDECVREKHSLLREVHQAIFYEQVFDIVNREAFKQSLGVNVTGIRENYLQLGIGLG 327

Query: 693  ASVFILLMASGKDGENDDKADTQKLETAVLPSD--DEVKLVEVK------KSAFPNRISF 848
             S+F+ L+ S +   + D    Q +E+ +LP D  D VKL E K         +PN +++
Sbjct: 328  ISIFLSLIPSNQGDLSVDSWVNQNVESGILPLDSHDGVKLAEEKDDILRKSGGYPNPLTY 387

Query: 849  EIYLQQIFHEHAFVRGKDKTIPSGR---GQSTKEEKFGLLGHFCMSLSHRIFSNKVVTEL 1019
            EIYLQQ+FHE+ + R K+K I +G    G  TK+   GLLGHFC+SL+HRIFSNKV  EL
Sbjct: 388  EIYLQQVFHEYLYGRAKNKPISTGTRVSGPPTKDGS-GLLGHFCLSLAHRIFSNKVHVEL 446

Query: 1020 ESLVCWVPYLHLITHPTWHSRTSSWTLSMKVPQSILHMKN------AIKSQFRTKVVVTD 1181
            E+ VC VPYLHL++HPTWHSRTSSWT+ +KVPQSILH ++        KS FRT VVV D
Sbjct: 447  ENAVCGVPYLHLVSHPTWHSRTSSWTVFLKVPQSILHAESNSRTAETAKSHFRTNVVVND 506

Query: 1182 DSISVEGEGGPNVVGLFKTFSEDMCSMNKYECDLADLPVTLLQQVASQVIRWLHEEALMV 1361
            D I VEGEG PNVVGLFK  SEDM SMNKY+CDLADLPV +LQQVASQVIRWLHEEALMV
Sbjct: 507  DCIHVEGEGTPNVVGLFKGRSEDMSSMNKYDCDLADLPVIILQQVASQVIRWLHEEALMV 566

Query: 1362 GIKASRDFLCLSFEVAQGEMISLVAHVDPKDERGYISWWLVMEDGFAEERKIRADIFEGG 1541
            GIKA+RDFL LSFE+ QGE +SLVAHVDP+D RG ISWWLVMEDGFA ERK+  DI +  
Sbjct: 567  GIKANRDFLSLSFELDQGETVSLVAHVDPEDMRGCISWWLVMEDGFAAERKLSIDISDDA 626

Query: 1542 LEYRKFLGYPNLELLYSTLMDLVSMCNGGGNH 1637
             +Y+KFLG+ +L++LYSTLMDLVS+C GGG+H
Sbjct: 627  SDYKKFLGHLSLDVLYSTLMDLVSLC-GGGSH 657


>ref|XP_006450970.1| hypothetical protein CICLE_v10007689mg [Citrus clementina]
            gi|557554196|gb|ESR64210.1| hypothetical protein
            CICLE_v10007689mg [Citrus clementina]
          Length = 657

 Score =  727 bits (1877), Expect = 0.0
 Identities = 380/572 (66%), Positives = 444/572 (77%), Gaps = 27/572 (4%)
 Frame = +3

Query: 3    HQELSVIIDLINTVEANDVVTVAGMTKPKPLPNETLSDLAVSAATKLHCFRHLGKYFKQS 182
            HQELSVIIDLINTVEAND VTVAGMT+PK LPNE LSDL+VSAATKL C+RHLG YFKQS
Sbjct: 88   HQELSVIIDLINTVEANDAVTVAGMTRPKALPNEVLSDLSVSAATKLQCYRHLGIYFKQS 147

Query: 183  AKALEQKIGREARFYGSLIRLQQNWKVKRQRLAASAPGNEGFTIDLYDNSLYDPAVVIRP 362
            AK+LEQ+I +EARFYG+LIRLQQNWKVKRQR+AA A GNEGFTIDL+DNSLYD A V RP
Sbjct: 148  AKSLEQQIAKEARFYGALIRLQQNWKVKRQRVAAPASGNEGFTIDLFDNSLYDSAPVSRP 207

Query: 363  S-MSIVRVDHDSAGMLAVRLPPNSCRSLHFGFFGAHSQFSVEYSSKETKKDSPS------ 521
            S +S +R+DHDSAGMLA+ LPPNSCRS  FGF G  S  S +  SK     SP       
Sbjct: 208  SSLSTIRIDHDSAGMLAINLPPNSCRSFRFGFLGVQSGDSSKQCSKVKNSCSPRPSKEAK 267

Query: 522  ---DDDECVKETHSILREVHQAIFAEQVFDLVNREAFSPSIGVNVTGIRENYLQLSVGQE 692
               +DDECV+E HS+LREVHQAIF EQVFD+VNREAF  S+GVNVTGIRENYLQL +G  
Sbjct: 268  ESVNDDECVREKHSLLREVHQAIFYEQVFDIVNREAFKQSLGVNVTGIRENYLQLGIGLG 327

Query: 693  ASVFILLMASGKDGENDDKADTQKLETAVLPSD--DEVKLVEVK------KSAFPNRISF 848
             S+F+ L+ S +   + D    Q +E+ +LP D  D VKL E K         +PN +++
Sbjct: 328  ISIFLSLIPSNQGDLSVDSWVNQNVESGILPLDSHDGVKLAEEKDDILRKSGGYPNPLTY 387

Query: 849  EIYLQQIFHEHAFVRGKDKTIPSGR---GQSTKEEKFGLLGHFCMSLSHRIFSNKVVTEL 1019
            EIYLQQ+FHE+ + R K+K I +G    G  TK+   GLLGHFC+SL+HRIFSNKV  EL
Sbjct: 388  EIYLQQVFHEYLYGRAKNKPISTGTRVSGPPTKDGS-GLLGHFCLSLAHRIFSNKVRVEL 446

Query: 1020 ESLVCWVPYLHLITHPTWHSRTSSWTLSMKVPQSILHMKN------AIKSQFRTKVVVTD 1181
            E+ VC VPYLHL++HPTWHSRTSSWT+ +KVPQSILH ++        KS FRT VVV D
Sbjct: 447  ENAVCGVPYLHLVSHPTWHSRTSSWTVFLKVPQSILHAESNSRTAETAKSHFRTNVVVND 506

Query: 1182 DSISVEGEGGPNVVGLFKTFSEDMCSMNKYECDLADLPVTLLQQVASQVIRWLHEEALMV 1361
            D I VEGEG PNVVGLF+  SEDM SMNKY+CDLADLPV +LQQVASQVIRWLHEEALMV
Sbjct: 507  DCIHVEGEGTPNVVGLFEGRSEDMSSMNKYDCDLADLPVIILQQVASQVIRWLHEEALMV 566

Query: 1362 GIKASRDFLCLSFEVAQGEMISLVAHVDPKDERGYISWWLVMEDGFAEERKIRADIFEGG 1541
            GIKA+RDFL LSFE+ QGE +SLVAHVDP+D RG ISWWLVMEDGFA ERK+  DI +  
Sbjct: 567  GIKANRDFLSLSFELDQGETVSLVAHVDPEDMRGCISWWLVMEDGFAAERKLSIDISDDA 626

Query: 1542 LEYRKFLGYPNLELLYSTLMDLVSMCNGGGNH 1637
             +Y+KFLG+ +L++LYSTLMDLVS+C GGG+H
Sbjct: 627  SDYKKFLGHLSLDVLYSTLMDLVSLC-GGGSH 657


>ref|XP_007013393.1| RNA polymerase II transcription mediators isoform 4 [Theobroma cacao]
            gi|508783756|gb|EOY31012.1| RNA polymerase II
            transcription mediators isoform 4 [Theobroma cacao]
          Length = 556

 Score =  722 bits (1864), Expect = 0.0
 Identities = 373/557 (66%), Positives = 444/557 (79%), Gaps = 36/557 (6%)
 Frame = +3

Query: 75   MTKPKPLPNETLSDLAVSAATKLHCFRHLGKYFKQSAKALEQKIGREARFYGSLIRLQQN 254
            MT+PKPLPNE LSDLAVSAATKL C+RHLGKYFKQSAKALEQ+I REARFYG+LIRLQQN
Sbjct: 1    MTRPKPLPNEVLSDLAVSAATKLQCYRHLGKYFKQSAKALEQQIAREARFYGALIRLQQN 60

Query: 255  WKVKRQRLAASAPGNEGFTIDLYDNSLYDPAVVIRPS-MSIVRVDHDSAGMLAVRLPPNS 431
            WKVKRQR+AA +  NEGFTIDL+DNSLYD A + RPS +S++ ++HDSAGMLA+ LP NS
Sbjct: 61   WKVKRQRVAAPSSSNEGFTIDLFDNSLYDSATISRPSSLSVIHIEHDSAGMLAINLPSNS 120

Query: 432  CRSLHFGFFGAHS------------QFSVEYSSKETKKDSPSDDDECVKETHSILREVHQ 575
            C SLHFGF G HS              SV+ ++++++K+S SDD E VKETH +LREVHQ
Sbjct: 121  CHSLHFGFLGVHSADIPKESSKIKTHGSVDQTTRDSQKESMSDD-ESVKETHLLLREVHQ 179

Query: 576  AIFAEQVFDLVNREAFSPSIGVNVTGIRENYLQLSVGQEASVFILLMASGK-DGENDDKA 752
            +IF +QVFD+VNREAF+ S GVNVTGIRENYLQLS+GQ  S+FI L+ S K D +  D A
Sbjct: 180  SIFNDQVFDMVNREAFNQSAGVNVTGIRENYLQLSIGQGTSLFISLVPSSKGDDQAVDTA 239

Query: 753  DTQKLETAVLPSD--DEVKLVE------VKKSAFPNRISFEIYLQQIFHEHAFVRGKDKT 908
            + Q LE+A++  D  D+VK  E       KK  FPNRIS EIYLQQI HEHAF++GKD+ 
Sbjct: 240  NAQNLESAIVSLDSFDDVKSGEGKHDITEKKWGFPNRISCEIYLQQIVHEHAFIKGKDRP 299

Query: 909  IPSGRGQSTKEEKFG--LLGHFCMSLSHRIFSNKVVTELESLVCWVPYLHLITHPTWHSR 1082
              SG   S +  K G  LLGHF +SL+HRIFSN+V+ +LE++VC VPYLHL+THPTWHSR
Sbjct: 300  NSSGTRVSGQSGKVGSGLLGHFSLSLAHRIFSNRVLMKLENVVCRVPYLHLMTHPTWHSR 359

Query: 1083 TSSWTLSMKVPQSILH------------MKNAIKSQFRTKVVVTDDSISVEGEGGPNVVG 1226
            TSSWT+ MKVPQSILH            MK+AIKSQFRTKVVV DD I+VEGEG PNVVG
Sbjct: 360  TSSWTIFMKVPQSILHVESQSQKSDFQNMKDAIKSQFRTKVVVNDDRINVEGEGAPNVVG 419

Query: 1227 LFKTFSEDMCSMNKYECDLADLPVTLLQQVASQVIRWLHEEALMVGIKASRDFLCLSFEV 1406
            LFK  SED+CS+NKY+CDLADLPV +LQQVASQVIRWLHEEALMVGIK +RDFLCL+FE+
Sbjct: 420  LFKRSSEDICSVNKYDCDLADLPVIILQQVASQVIRWLHEEALMVGIKTNRDFLCLTFEL 479

Query: 1407 AQGEMISLVAHVDPKDERGYISWWLVMEDGFAEERKIRADIFEGGLEYRKFLGYPNLELL 1586
             QGE +SLVAHVDP+D +G ISWWLVMEDGFAE+ K++ D+ +G  EYRKFLG+ +L++L
Sbjct: 480  EQGETVSLVAHVDPEDIQGCISWWLVMEDGFAEDWKLQMDMSDGASEYRKFLGHLSLDVL 539

Query: 1587 YSTLMDLVSMCNGGGNH 1637
            YSTLMDLVS+C GGGNH
Sbjct: 540  YSTLMDLVSLCGGGGNH 556


>gb|EXB54541.1| hypothetical protein L484_006289 [Morus notabilis]
          Length = 701

 Score =  705 bits (1820), Expect = 0.0
 Identities = 370/568 (65%), Positives = 443/568 (77%), Gaps = 33/568 (5%)
 Frame = +3

Query: 6    QELSVIIDLINTVEANDVVTVAGMTKPKPLPNETLSDLAVSAATKLHCFRHLGKYFKQSA 185
            QELSVI+DLINTVEAND VTVAGMT+PKPLPNE LSDLAVSAA KL  FR LGKYFKQSA
Sbjct: 84   QELSVIVDLINTVEANDAVTVAGMTRPKPLPNEVLSDLAVSAAIKLQGFRSLGKYFKQSA 143

Query: 186  KALEQKIGREARFYGSLIRLQQNWKVKRQRLAASAPGNEGFTIDLYDNSLYDPAVVIRPS 365
            KALEQ++ REARFYG+LIRLQQNWKVKRQR+AA+A GNEGFTIDL+DNSLYDPA V RP+
Sbjct: 144  KALEQQVVREARFYGALIRLQQNWKVKRQRIAAAASGNEGFTIDLFDNSLYDPASVYRPT 203

Query: 366  -MSIVRVDHDSAGMLAVRLPPNSCRSLHFGFFGAHSQFSVEYS---------SKETKKDS 515
             +S+VRV+HD AGMLA+ LPPNSCRSL FGFFG H   + E +         S+ET+K++
Sbjct: 204  FLSMVRVEHDPAGMLAINLPPNSCRSLQFGFFGVHPCDNTEPNKTKVGSSVHSRETEKEA 263

Query: 516  PSDDDECVKETHSILREVHQAIFAEQVFDLVNREAFSPSIGVNVTGIRENYLQLSVGQEA 695
             ++DDEC+KETH +LR+VHQ+IF E+VFDLVNREAF+ S+GVNVTGIRENYLQLS+G   
Sbjct: 264  -ANDDECIKETHLLLRQVHQSIFDEKVFDLVNREAFNQSLGVNVTGIRENYLQLSIGLGN 322

Query: 696  SVFILLMASGKDGENDDKADTQKLETAVLPSD--DEVKLVEVKKS-------AFPNRISF 848
            SVFI L++S +D +  D A  Q +E A+LP D  D VKL E  K          P+ IS 
Sbjct: 323  SVFISLVSSNQDDQTGDDAGNQDIENAILPLDSLDGVKLPEEDKQDTFNKELGTPDYISC 382

Query: 849  EIYLQQIFHEHAFVRGKDK---TIPSGRGQSTKEEKFGLLGHFCMSLSHRIFSNKVVTEL 1019
            EIYLQQ+FHEH F R KDK   T+    GQ  KE    LLGHFC+SL+HRIFS KV+  L
Sbjct: 383  EIYLQQLFHEHVFSRAKDKPVSTVSRVSGQPAKEGP-SLLGHFCLSLAHRIFSKKVLVVL 441

Query: 1020 ESLVCWVPYLHLITHPTWHSRTSSWTLSMKVPQSILH-----------MKNAIKSQFRTK 1166
            E+LV  V YL L++HPTW+SRTSSWT+ MK+PQSILH           MK+  KSQFRTK
Sbjct: 442  ENLVSGVSYLQLLSHPTWNSRTSSWTIFMKIPQSILHGGSHQTSDLHHMKSTTKSQFRTK 501

Query: 1167 VVVTDDSISVEGEGGPNVVGLFKTFSEDMCSMNKYECDLADLPVTLLQQVASQVIRWLHE 1346
            VV+ DD ISVEGEG PNVVGLFK  ++++ SMN+YEC+L DLPV +LQQVA Q++RWLHE
Sbjct: 502  VVIKDDFISVEGEGAPNVVGLFKGSAQEVSSMNRYECNLEDLPVIILQQVAGQIVRWLHE 561

Query: 1347 EALMVGIKASRDFLCLSFEVAQGEMISLVAHVDPKDERGYISWWLVMEDGFAEERKIRAD 1526
            EALMVGIK +RDFL LSFE+ QGE ++L+AHVDP+D +G ISWWLVMEDGF EE K+  D
Sbjct: 562  EALMVGIKVNRDFLSLSFELEQGETLTLLAHVDPEDAQGCISWWLVMEDGFTEEGKLHMD 621

Query: 1527 IFEGGLEYRKFLGYPNLELLYSTLMDLV 1610
            + +G  EYR+FLG+ +L+LLYSTL+DLV
Sbjct: 622  LSDGVSEYRRFLGHLSLDLLYSTLIDLV 649


>ref|XP_006374395.1| hypothetical protein POPTR_0015s06780g [Populus trichocarpa]
            gi|550322157|gb|ERP52192.1| hypothetical protein
            POPTR_0015s06780g [Populus trichocarpa]
          Length = 667

 Score =  702 bits (1812), Expect = 0.0
 Identities = 366/580 (63%), Positives = 441/580 (76%), Gaps = 35/580 (6%)
 Frame = +3

Query: 3    HQELSVIIDLINTVEANDVVTVAGMTKPKPLPNETLSDLAVSAATKLHCFRHLGKYFKQS 182
            HQELSVIIDLINTVEAND VTVAGMT+PKPLPNE L+DLAVS ATKL C+R+LGKYFKQS
Sbjct: 91   HQELSVIIDLINTVEANDAVTVAGMTRPKPLPNEILADLAVSTATKLQCYRNLGKYFKQS 150

Query: 183  AKALEQKIGREARFYGSLIRLQQNWKVKRQRLAASAPGNEGFTIDLYDNSLYDPAVVIRP 362
            AKALEQ++ REARFYG+LIRLQQNWKVKRQR+AA APGNEGF IDL+DNSLYD   V +P
Sbjct: 151  AKALEQQVAREARFYGALIRLQQNWKVKRQRVAAIAPGNEGFMIDLFDNSLYDSVAVFQP 210

Query: 363  S-MSIVRVDHDSAGMLAVRLPPNSCRSLHFGFFGAHSQF-----------SVEYSSKETK 506
            S +S +R+DHDS GMLA+ LP  SC SL FGF   HS             S++  SK  +
Sbjct: 211  SSLSTIRIDHDSDGMLAINLPSKSCHSLVFGFLSGHSNVPKKSNKIKTHGSLKNPSKNPE 270

Query: 507  KDSPSDDDECVKETHSILREVHQAIFAEQVFDLVNREAFSPSIGVNVTGIRENYLQLSVG 686
            K+S SD+ ECVK+TH +LR+VH+ IF EQVFD+VNR A + S G+NVTGI+ENYLQL +G
Sbjct: 271  KESLSDN-ECVKDTHLLLRKVHRTIFDEQVFDMVNRGAVNQSSGLNVTGIQENYLQLCIG 329

Query: 687  QEASVFILLMASGKDGENDDKADTQKLETAVLPSD--DEVKLVE------VKKSAFPNRI 842
               S+FI ++ S +  +  D    + LE+AV+P D  D VKL E       KK  FPN I
Sbjct: 330  PGISIFISIVPSDQGDQAIDSEGPENLESAVVPLDSFDGVKLAEEKHNSLTKKPRFPNCI 389

Query: 843  SFEIYLQQIFHEHAFVRGKDKTIPSGR---GQSTKEEKFGLLGHFCMSLSHRIFSNKVVT 1013
            ++EIYL+QIFHE+ FV  K +   +G    GQ   +   GLL HFC+SLSHRI SNKV+ 
Sbjct: 390  TYEIYLKQIFHEYVFVEAKGRPSFTGTRMPGQPANDGS-GLLSHFCLSLSHRIISNKVLM 448

Query: 1014 ELESLVCWVPYLHLITHPTWHSRTSSWTLSMKVPQSILH------------MKNAIKSQF 1157
            ELE++VC VPYLHLI+HPTWHSR+S+WT+ MK+P SILH            MKN +KS+F
Sbjct: 449  ELENVVCRVPYLHLISHPTWHSRSSAWTIFMKIPPSILHASSQTRTPDIQNMKNVVKSEF 508

Query: 1158 RTKVVVTDDSISVEGEGGPNVVGLFKTFSEDMCSMNKYECDLADLPVTLLQQVASQVIRW 1337
             TKVVV DD I++E EG PNVVGLFK  S+D CS NKY+C+L DLPV +LQQVASQVIRW
Sbjct: 509  WTKVVVHDDCINIEAEGAPNVVGLFKDSSDDKCSTNKYDCNLDDLPVIILQQVASQVIRW 568

Query: 1338 LHEEALMVGIKASRDFLCLSFEVAQGEMISLVAHVDPKDERGYISWWLVMEDGFAEERKI 1517
            LHEEAL VGIKA+RDFLCLSFE+ QGE+++LVAHVDP+D +G ISWWL MEDGFAEE+K+
Sbjct: 569  LHEEALAVGIKANRDFLCLSFELEQGEILNLVAHVDPEDTQGCISWWLTMEDGFAEEKKL 628

Query: 1518 RADIFEGGLEYRKFLGYPNLELLYSTLMDLVSMCNGGGNH 1637
              +I +G  EYRKFLGY  L++LYSTLMDLVS+C GGG+H
Sbjct: 629  HMNIADGASEYRKFLGYLPLDVLYSTLMDLVSLC-GGGSH 667


>ref|XP_004251571.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            17-like [Solanum lycopersicum]
          Length = 663

 Score =  701 bits (1809), Expect = 0.0
 Identities = 372/577 (64%), Positives = 447/577 (77%), Gaps = 33/577 (5%)
 Frame = +3

Query: 3    HQELSVIIDLINTVEANDVVTVAGMTKPKPLPNETLSDLAVSAATKLHCFRHLGKYFKQS 182
            HQEL VIIDLI+TVEAND VTVAGMT+PK LPNE LSDLAVS ATKL CFRHLGKYFKQS
Sbjct: 91   HQELQVIIDLIHTVEANDAVTVAGMTRPKQLPNEHLSDLAVSMATKLQCFRHLGKYFKQS 150

Query: 183  AKALEQKIGREARFYGSLIRLQQNWKVKRQRLAASAPGNEGFTIDLYDNSLYDPAVVIRP 362
            AKALEQ++ REARFYG+LIRLQQNWKVK  R+ A+A GNEGF IDL+D SLYDPAV  RP
Sbjct: 151  AKALEQQVAREARFYGALIRLQQNWKVKWHRMVAAASGNEGFYIDLFDTSLYDPAVAFRP 210

Query: 363  SM-SIVRVDHDSAGMLAVRLPPNSCRSLHFGFFGA--------HSQF----SVEYSSKET 503
            S  S+VR++HD AGMLAV LPPNSCR+L F F GA        HS+     S E SS ET
Sbjct: 211  SSASVVRIEHDPAGMLAVNLPPNSCRTLQFEFLGASTPAGVIKHSRLRPKVSFEDSSGET 270

Query: 504  KKDSPSDDDECVKETHSILREVHQAIFAEQVFDLVNREAFSPSIGVNVTGIRENYLQLSV 683
            K++    DDE V+ETHS LREVH+AIF EQVFDLVNREAF+P++G +VTGI+EN L+LS+
Sbjct: 271  KREK--SDDEHVRETHSTLREVHRAIFDEQVFDLVNREAFNPALGADVTGIQENLLRLSI 328

Query: 684  GQEASVFILLMASGKDGENDDKADTQKLETAVLPSD-------DEVKLVEVKKSAFPNRI 842
            GQ AS+ I L+ S  DG+  +    +  ETA++P +       DE KL ++KK  FPNRI
Sbjct: 329  GQRASLSISLVPSADDGQTANAVGDEHPETAIVPFESVDASKQDEGKL-DLKKLGFPNRI 387

Query: 843  SFEIYLQQIFHEHAFVRGKDKTIPSGRGQ-STKEEKFG--LLGHFCMSLSHRIFSNKVVT 1013
            SFEIYLQQ+FHEH F++ K++    G+ + S++  K G  LLGHFC+SL+HRIFSNKV+ 
Sbjct: 388  SFEIYLQQLFHEHVFIKAKNRLSSLGKPEISSQPVKDGPNLLGHFCVSLAHRIFSNKVLA 447

Query: 1014 ELESLVCWVPYLHLITHPTWHSRTSSWTLSMKVPQSILH----------MKNAIKSQFRT 1163
            ELESLV  VPY+ LI+HPTWHSRTSSWTLSM VP+SILH          +KN +K  FRT
Sbjct: 448  ELESLVSRVPYVQLISHPTWHSRTSSWTLSMDVPESILHAGSLSHSSDYVKN-VKFHFRT 506

Query: 1164 KVVVTDDSISVEGEGGPNVVGLFKTFSEDMCSMNKYECDLADLPVTLLQQVASQVIRWLH 1343
            KV+V DD IS+EGEG PN+VGLFK   + +C MN+Y+CDL+DLP+ LLQQVASQVIRWLH
Sbjct: 507  KVMVRDDCISLEGEGAPNIVGLFKGKPDSICPMNRYDCDLSDLPMVLLQQVASQVIRWLH 566

Query: 1344 EEALMVGIKASRDFLCLSFEVAQGEMISLVAHVDPKDERGYISWWLVMEDGFAEERKIRA 1523
            EEALMVGIKA+RDFL LSFE+ QGE +SLVAHVDP+D +G ISWWLVM DGF+EE K++ 
Sbjct: 567  EEALMVGIKANRDFLSLSFELEQGETLSLVAHVDPEDIQGCISWWLVMGDGFSEENKLQM 626

Query: 1524 DIFEGGLEYRKFLGYPNLELLYSTLMDLVSMCNGGGN 1634
            D+  G  E RKFLGY +LE+LYSTLMD+VS+ +  G+
Sbjct: 627  DVNSGESETRKFLGYLSLEVLYSTLMDMVSVSSTAGH 663


>ref|XP_006364902.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            17-like [Solanum tuberosum]
          Length = 663

 Score =  697 bits (1800), Expect = 0.0
 Identities = 373/576 (64%), Positives = 443/576 (76%), Gaps = 32/576 (5%)
 Frame = +3

Query: 3    HQELSVIIDLINTVEANDVVTVAGMTKPKPLPNETLSDLAVSAATKLHCFRHLGKYFKQS 182
            HQEL VIIDLI+TVEAND VTVA MT+PK LPNE LSDLAVS ATKL CFRHLGKYFKQS
Sbjct: 91   HQELQVIIDLIHTVEANDAVTVASMTRPKQLPNEHLSDLAVSMATKLQCFRHLGKYFKQS 150

Query: 183  AKALEQKIGREARFYGSLIRLQQNWKVKRQRLAASAPGNEGFTIDLYDNSLYDPAVVIRP 362
            AKALEQ++ REARFYG+LIRLQQNWKVK  R+ A+A GNEGF IDL+D SLYDPAV  RP
Sbjct: 151  AKALEQQVAREARFYGALIRLQQNWKVKWHRMVAAASGNEGFYIDLFDTSLYDPAVAFRP 210

Query: 363  SM-SIVRVDHDSAGMLAVRLPPNSCRSLHFGFFGA--------HSQF----SVEYSSKET 503
            S  S+VR++HD AGMLAV LPPNSCR+L F F GA        HS+     S E SS ET
Sbjct: 211  SSASVVRIEHDPAGMLAVNLPPNSCRTLQFEFLGASAPSGVINHSRLKPKGSFEDSSGET 270

Query: 504  KKDSPSDDDECVKETHSILREVHQAIFAEQVFDLVNREAFSPSIGVNVTGIRENYLQLSV 683
            K++    DDE V+ETHS LREVH+AIF EQVFDLVNREAF+P++G +VTGI+EN L+LS+
Sbjct: 271  KREK--SDDEHVRETHSTLREVHRAIFDEQVFDLVNREAFNPALGADVTGIQENLLRLSI 328

Query: 684  GQEASVFILLMASGKDGENDDKADTQKLETAVLP--SDDEVKLVE----VKKSAFPNRIS 845
            GQ AS+ I L+ S  DG+  +    +  ETA++P  S D  KL E     KK  FPNRIS
Sbjct: 329  GQRASLSISLVPSTDDGQTANAVGDEHSETAIVPFESVDASKLDEGKFNFKKLGFPNRIS 388

Query: 846  FEIYLQQIFHEHAFVRGKDKTIPSGRGQ-STKEEKFG--LLGHFCMSLSHRIFSNKVVTE 1016
            FEIYLQQ+FHEH F++ K++    G+ Q S++  K G  LLGHFC+SL+HRIFSNKV+ E
Sbjct: 389  FEIYLQQLFHEHVFIKAKNRLSSLGKPQLSSQPVKDGPNLLGHFCVSLAHRIFSNKVLAE 448

Query: 1017 LESLVCWVPYLHLITHPTWHSRTSSWTLSMKVPQSILH----------MKNAIKSQFRTK 1166
            LESLV  +PY+ LI+HPTWHSRTSSWTLSM VP+SILH          +KN +K  FRTK
Sbjct: 449  LESLVSRIPYVQLISHPTWHSRTSSWTLSMDVPESILHAGSLSHSSDYVKN-VKFHFRTK 507

Query: 1167 VVVTDDSISVEGEGGPNVVGLFKTFSEDMCSMNKYECDLADLPVTLLQQVASQVIRWLHE 1346
            V+V DD IS+EGEG PNVVGLFK   +  C MN+Y+CDL+DLP+ LLQQVASQVIRWLHE
Sbjct: 508  VMVRDDCISLEGEGAPNVVGLFKGKPDSTCPMNRYDCDLSDLPMVLLQQVASQVIRWLHE 567

Query: 1347 EALMVGIKASRDFLCLSFEVAQGEMISLVAHVDPKDERGYISWWLVMEDGFAEERKIRAD 1526
            EALMVGIKA+RDFL LSFE+ QGE +SLVAHVDP+D +G ISWWLVM DGF+EE K++ D
Sbjct: 568  EALMVGIKANRDFLSLSFELEQGETLSLVAHVDPEDIQGCISWWLVMGDGFSEENKLKMD 627

Query: 1527 IFEGGLEYRKFLGYPNLELLYSTLMDLVSMCNGGGN 1634
            +  G  E RKFLGY +LE+LYSTLMD+VS+ +  G+
Sbjct: 628  VNSGESETRKFLGYLSLEVLYSTLMDMVSVSSTAGH 663


>ref|XP_007013392.1| RNA polymerase II transcription mediators isoform 3 [Theobroma cacao]
            gi|590578019|ref|XP_007013394.1| RNA polymerase II
            transcription mediators isoform 3 [Theobroma cacao]
            gi|508783755|gb|EOY31011.1| RNA polymerase II
            transcription mediators isoform 3 [Theobroma cacao]
            gi|508783757|gb|EOY31013.1| RNA polymerase II
            transcription mediators isoform 3 [Theobroma cacao]
          Length = 527

 Score =  676 bits (1745), Expect = 0.0
 Identities = 356/555 (64%), Positives = 420/555 (75%), Gaps = 34/555 (6%)
 Frame = +3

Query: 75   MTKPKPLPNETLSDLAVSAATKLHCFRHLGKYFKQSAKALEQKIGREARFYGSLIRLQQN 254
            MT+PKPLPNE LSDLAVSAATKL C+RHLGKYFKQSAKALEQ+I REARFYG+LIRLQQN
Sbjct: 1    MTRPKPLPNEVLSDLAVSAATKLQCYRHLGKYFKQSAKALEQQIAREARFYGALIRLQQN 60

Query: 255  WKVKRQRLAASAPGNEGFTIDLYDNSLYDPAVVIRPS-MSIVRVDHDSAGMLAVRLPPNS 431
            WKVKRQR+AA +  NEGFTIDL+DNSLYD A + RPS +S++ ++HDSAGMLA+ LP NS
Sbjct: 61   WKVKRQRVAAPSSSNEGFTIDLFDNSLYDSATISRPSSLSVIHIEHDSAGMLAINLPSNS 120

Query: 432  CRSLHFGFFGAHS------------QFSVEYSSKETKKDSPSDDDECVKETHSILREVHQ 575
            C SLHFGF G HS              SV+ ++++++K+S SDD E VKETH +LREVHQ
Sbjct: 121  CHSLHFGFLGVHSADIPKESSKIKTHGSVDQTTRDSQKESMSDD-ESVKETHLLLREVHQ 179

Query: 576  AIFAEQVFDLVNREAFSPSIGVNVTGIRENYLQLSVGQEASVFILLMASGK-DGENDDKA 752
            +IF +QVFD+VNREAF+ S GVNVTGIRENYLQLS+GQ  S+FI L+ S K D +  D A
Sbjct: 180  SIFNDQVFDMVNREAFNQSAGVNVTGIRENYLQLSIGQGTSLFISLVPSSKGDDQAVDTA 239

Query: 753  DTQKLETAVLPSD--DEVKLVE------VKKSAFPNRISFEIYLQQIFHEHAFVRGKDKT 908
            + Q LE+A++  D  D+VK  E       KK  FPNRIS EIYLQQI HEHAF++GKD+ 
Sbjct: 240  NAQNLESAIVSLDSFDDVKSGEGKHDITEKKWGFPNRISCEIYLQQIVHEHAFIKGKDRP 299

Query: 909  IPSGRGQSTKEEKFGLLGHFCMSLSHRIFSNKVVTELESLVCWVPYLHLITHPTWHSRTS 1088
              SG   S +  K                           VC VPYLHL+THPTWHSRTS
Sbjct: 300  NSSGTRVSGQSGK---------------------------VCRVPYLHLMTHPTWHSRTS 332

Query: 1089 SWTLSMKVPQSILH------------MKNAIKSQFRTKVVVTDDSISVEGEGGPNVVGLF 1232
            SWT+ MKVPQSILH            MK+AIKSQFRTKVVV DD I+VEGEG PNVVGLF
Sbjct: 333  SWTIFMKVPQSILHVESQSQKSDFQNMKDAIKSQFRTKVVVNDDRINVEGEGAPNVVGLF 392

Query: 1233 KTFSEDMCSMNKYECDLADLPVTLLQQVASQVIRWLHEEALMVGIKASRDFLCLSFEVAQ 1412
            K  SED+CS+NKY+CDLADLPV +LQQVASQVIRWLHEEALMVGIK +RDFLCL+FE+ Q
Sbjct: 393  KRSSEDICSVNKYDCDLADLPVIILQQVASQVIRWLHEEALMVGIKTNRDFLCLTFELEQ 452

Query: 1413 GEMISLVAHVDPKDERGYISWWLVMEDGFAEERKIRADIFEGGLEYRKFLGYPNLELLYS 1592
            GE +SLVAHVDP+D +G ISWWLVMEDGFAE+ K++ D+ +G  EYRKFLG+ +L++LYS
Sbjct: 453  GETVSLVAHVDPEDIQGCISWWLVMEDGFAEDWKLQMDMSDGASEYRKFLGHLSLDVLYS 512

Query: 1593 TLMDLVSMCNGGGNH 1637
            TLMDLVS+C GGGNH
Sbjct: 513  TLMDLVSLCGGGGNH 527


>ref|XP_004141551.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            17-like [Cucumis sativus]
            gi|449481525|ref|XP_004156208.1| PREDICTED: mediator of
            RNA polymerase II transcription subunit 17-like [Cucumis
            sativus]
          Length = 662

 Score =  676 bits (1743), Expect = 0.0
 Identities = 353/576 (61%), Positives = 432/576 (75%), Gaps = 33/576 (5%)
 Frame = +3

Query: 3    HQELSVIIDLINTVEANDVVTVAGMTKPKPLPNETLSDLAVSAATKLHCFRHLGKYFKQS 182
            HQELSVIIDLINTVEAND VTVAGMT+PKPLPNE L+DL VS ATKL CFRHLGKYFKQS
Sbjct: 84   HQELSVIIDLINTVEANDAVTVAGMTRPKPLPNEVLADLGVSVATKLQCFRHLGKYFKQS 143

Query: 183  AKALEQKIGREARFYGSLIRLQQNWKVKRQRLAASAPGNEGFTIDLYDNSLYDPAVVIRP 362
            AK LE+++ REARFYG+LIRLQQNWKVKRQR+AA AP NEGFTIDL+DNS  DP+ V RP
Sbjct: 144  AKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSVFRP 203

Query: 363  SMSIVRVDHDSAGMLAVRLPPNSCRSLHFGFF-GAHSQFSVEYSSKETKKDSP------- 518
            S S +RVDHDS+GMLA+ LPPNSC SL FGF  G + +  +E    E+   S        
Sbjct: 204  SSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNVENPLERDKNESTNPSNQSSVNRE 263

Query: 519  ---SDDDECVKETHSILREVHQAIFAEQVFDLVNREAFSPSIGVNVTGIRENYLQLSVGQ 689
               ++DDE +KET+S+LR+VH AIF+EQVFDLVN+EAF+PS+G+NVTGIRENYLQLS+ Q
Sbjct: 264  KEFTNDDEYIKETNSLLRQVHHAIFSEQVFDLVNQEAFNPSVGINVTGIRENYLQLSIDQ 323

Query: 690  EASVFILLMASGKDGENDDKADTQKLETAVLPSD--DEVKLVE-----VKKSAFPNRISF 848
              SVFI L+ SG+  +  + A+++ LE A LP D  D ++L +      KK   PN I+F
Sbjct: 324  GTSVFISLVPSGQSSQTVEGANSEILENASLPFDSLDGIELPDRSDPLEKKLRNPNHITF 383

Query: 849  EIYLQQIFHEHAFVRGKDKTIPSGRGQS--TKEEKFGLLGHFCMSLSHRIFSNKVVTELE 1022
            EIYLQQIFHE  FV+  D+ I S   QS     +  GLLGHFC+SL+HR+F+N V+ ELE
Sbjct: 384  EIYLQQIFHELVFVKSNDRPISSLSRQSGQVSNDGSGLLGHFCLSLAHRMFANNVLMELE 443

Query: 1023 SLVCWVPYLHLITHPTWHSRTSSWTLSMKVPQSILH-------------MKNAIKSQFRT 1163
            ++V  VP+L LI+HPTW+SR SSWT  M+VP SILH             M N  K+QF T
Sbjct: 444  NVVWKVPFLQLISHPTWNSRKSSWTFFMEVPWSILHPNSIKARTSDGYQMNNVTKTQFLT 503

Query: 1164 KVVVTDDSISVEGEGGPNVVGLFKTFSEDMCSMNKYECDLADLPVTLLQQVASQVIRWLH 1343
            KVVV DD I++EGEG PNVVGLF   S+D+ S N+Y CDLADLPV +L QVASQ+I WLH
Sbjct: 504  KVVVNDDCITIEGEGAPNVVGLFNGNSKDIYSTNRYSCDLADLPVIILLQVASQIILWLH 563

Query: 1344 EEALMVGIKASRDFLCLSFEVAQGEMISLVAHVDPKDERGYISWWLVMEDGFAEERKIRA 1523
            EEAL+ GIKA+RDFL LSFE+ QGE + LVAHVDP+D +G +SWWLVM+DG  E+RK+  
Sbjct: 564  EEALIWGIKANRDFLSLSFELEQGETLRLVAHVDPEDPQGCLSWWLVMDDGLMEDRKLNF 623

Query: 1524 DIFEGGLEYRKFLGYPNLELLYSTLMDLVSMCNGGG 1631
            +  +   EYRKFLG+ +LE+L+STLMDLVS+C+G G
Sbjct: 624  ETSDVVPEYRKFLGHLSLEVLHSTLMDLVSLCSGVG 659


>ref|XP_003525658.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            17-like isoform X1 [Glycine max]
            gi|571454302|ref|XP_006579749.1| PREDICTED: mediator of
            RNA polymerase II transcription subunit 17-like isoform
            X2 [Glycine max]
          Length = 659

 Score =  667 bits (1722), Expect = 0.0
 Identities = 355/575 (61%), Positives = 428/575 (74%), Gaps = 31/575 (5%)
 Frame = +3

Query: 3    HQELSVIIDLINTVEANDVVTVAGMTKPKPLPNETLSDLAVSAATKLHCFRHLGKYFKQS 182
            HQELSVIIDLINTVEAND VTVA MT+PK LPNE LSDLAVSAATKL C+RH+GKYFKQS
Sbjct: 86   HQELSVIIDLINTVEANDAVTVASMTRPKLLPNEALSDLAVSAATKLQCYRHVGKYFKQS 145

Query: 183  AKALEQKIGREARFYGSLIRLQQNWKVKRQRLAASAPGNEGFTIDLYDNSLYDPAVVIRP 362
            AKA EQ++ REARFYG+LIRLQQNWKVKRQR AA  PGNEGFT DL+DNS YD A +IR 
Sbjct: 146  AKAFEQQVAREARFYGALIRLQQNWKVKRQRQAAIVPGNEGFTFDLFDNS-YDQAAIIRS 204

Query: 363  -SMSIVRVDHDSAGMLAVRLPPNSCRSLHFGFFGAH------------SQFSVEYSSKET 503
             SMS VRV+HD+AG LA+ + P+ C SL FGF GA             S FS E +  +T
Sbjct: 205  LSMSTVRVNHDAAGNLAINVSPDLCHSLQFGFVGAQSDDTRRKSNQNKSHFSGELNLGKT 264

Query: 504  KKDSPSDDDECVKETHSILREVHQAIFAEQVFDLVNREAFSPSIGVNVTGIRENYLQLSV 683
             ++S S D+ECVK+THS+LREVH+AIF EQVFDLVNREAF+   GV+VTGIRENYLQLS+
Sbjct: 265  GEESLS-DEECVKKTHSLLREVHEAIFNEQVFDLVNREAFNTVAGVSVTGIRENYLQLSL 323

Query: 684  GQEASVFILLMASGKDGENDDKADTQKLETAVLPSDD------EVKLVEVKKSAFPNRIS 845
            GQE SV++ L+++ +D    +   T   E A+LP +       E K     K  F N I 
Sbjct: 324  GQETSVYLTLVSNSQDHSTVEGELTDNAENAILPLESSDGMKREAKQNTSNKGQFSNSIC 383

Query: 846  FEIYLQQIFHEHAFVRGKDKTIPSGRGQSTKEEKFG--LLGHFCMSLSHRIFSNKVVTEL 1019
            +EIY+QQIFHE+ F +G DK   SG   S  + K G  LLGHF  SL+HRIFS KV+ EL
Sbjct: 384  YEIYIQQIFHEYIFGKGGDKPSSSGNRLSGIQAKDGSSLLGHFFKSLAHRIFSTKVLAEL 443

Query: 1020 ESLVCWVPYLHLITHPTWHSRTSSWTLSMKVPQSIL----------HMKNAIKSQFRTKV 1169
            E++VC VPY+ LI++PTWHSR SSWTL M+VPQSIL          + KNA+K QF TKV
Sbjct: 444  ENVVCKVPYIQLISNPTWHSRASSWTLYMEVPQSILRGSQTKTSDYYEKNAVKRQFWTKV 503

Query: 1170 VVTDDSISVEGEGGPNVVGLFKTFSEDMCSMNKYECDLADLPVTLLQQVASQVIRWLHEE 1349
            VV DD I+V+ EG PNV GLFK   E+  S+NKY C+LADLPV +LQQVASQ+I WL++E
Sbjct: 504  VVNDDCINVKAEGSPNVAGLFKGKIEETHSINKYNCNLADLPVIILQQVASQIINWLYQE 563

Query: 1350 ALMVGIKASRDFLCLSFEVAQGEMISLVAHVDPKDERGYISWWLVMEDGFAEERKIRADI 1529
            A+MVGIKA+RDFLCLS E+ QGE + LVA VDP+D  G ISWWLVMED FAEE+K+   I
Sbjct: 564  AMMVGIKANRDFLCLSLELEQGETLGLVASVDPEDSEGCISWWLVMEDSFAEEQKLHMSI 623

Query: 1530 FEGGLEYRKFLGYPNLELLYSTLMDLVSMCNGGGN 1634
             +G  EYRKFLG+ +L+LLY+TL+DLVS+C+GGG+
Sbjct: 624  TDGASEYRKFLGHLSLDLLYATLIDLVSLCSGGGS 658


>ref|XP_007154971.1| hypothetical protein PHAVU_003G161800g [Phaseolus vulgaris]
            gi|561028325|gb|ESW26965.1| hypothetical protein
            PHAVU_003G161800g [Phaseolus vulgaris]
          Length = 663

 Score =  664 bits (1714), Expect = 0.0
 Identities = 356/577 (61%), Positives = 428/577 (74%), Gaps = 35/577 (6%)
 Frame = +3

Query: 3    HQELSVIIDLINTVEANDVVTVAGMTKPKPLPNETLSDLAVSAATKLHCFRHLGKYFKQS 182
            HQELSVIIDLINTVEAND VTVA MT+PK  PNE LSDLAVSAA+KL C+R +GKYFKQS
Sbjct: 86   HQELSVIIDLINTVEANDAVTVASMTRPKLQPNEALSDLAVSAASKLQCYRQVGKYFKQS 145

Query: 183  AKALEQKIGREARFYGSLIRLQQNWKVKRQRLAASAPGNEGFTIDLYDNSLYDPAVVIRP 362
            AKA EQ++ REARFYG+LIRLQQNWKVKRQR AA  PGNEGFT DL+DNS YD A +IR 
Sbjct: 146  AKAFEQQVAREARFYGALIRLQQNWKVKRQRQAAIVPGNEGFTFDLFDNS-YDQASIIRS 204

Query: 363  -SMSIVRVDHDSAGMLAVRLPPNSCRSLHFGFFGAHSQ------------FSVEYSSKET 503
             SMS VRV+HD+AGMLA+ + P+ CRSL FGF GA S             FSVE+S  ET
Sbjct: 205  LSMSTVRVNHDAAGMLAINMSPDLCRSLQFGFVGAQSDDIPRNSKGNKSYFSVEHSLGET 264

Query: 504  KKDSPSDDDECVKETHSILREVHQAIFAEQVFDLVNREAFSPSIGVNVTGIRENYLQLSV 683
             K+S + D+ECVK+TH++LREVH+AIF E VFDLVNREAF+   GV+VTGIRENYL+LS+
Sbjct: 265  GKESLT-DEECVKKTHALLREVHEAIFNEHVFDLVNREAFTTVTGVSVTGIRENYLELSL 323

Query: 684  GQEASVFILLMASGKDGENDDKADTQKLETAVLPSDD------EVKLVEVKKSAFPNRIS 845
            G+  SV++ L+++G+D    +   T   E A+LP +       E K    KK  F N I 
Sbjct: 324  GRGTSVYLSLVSNGQDHSTVENELTNNAENAMLPPESSDEMMLEAKQNAPKKGLFSNSIC 383

Query: 846  FEIYLQQIFHEHAFVRGKDKTIPSGR---GQSTKEEKFG---LLGHFCMSLSHRIFSNKV 1007
            +EIY+QQIFHEH F +G +K I SG    G   KE K G   LLGHF MSLSHRIFS KV
Sbjct: 384  YEIYIQQIFHEHIFGKGGEKPISSGNRLSGVQAKETKDGGSNLLGHFFMSLSHRIFSTKV 443

Query: 1008 VTELESLVCWVPYLHLITHPTWHSRTSSWTLSMKVPQSILH----------MKNAIKSQF 1157
            + ELE++V  VPYL LI++PTWHSR SSWTL M+VPQSIL            KNA+K QF
Sbjct: 444  LAELENVVSKVPYLQLISNPTWHSRASSWTLYMEVPQSILRGSQIKTSDYFEKNAVKRQF 503

Query: 1158 RTKVVVTDDSISVEGEGGPNVVGLFKTFSEDMCSMNKYECDLADLPVTLLQQVASQVIRW 1337
              K VV D+ I+V+ EG PNV GLFK   E+  S+NKY C+LADLPV +LQQVASQ+I W
Sbjct: 504  WIKAVVNDNCINVKAEGSPNVAGLFKGKIEETHSINKYNCNLADLPVIILQQVASQIINW 563

Query: 1338 LHEEALMVGIKASRDFLCLSFEVAQGEMISLVAHVDPKDERGYISWWLVMEDGFAEERKI 1517
            L++EALMVGIKA+RDFLCLSFE+ QGE + LVA VDP+D  G ISWWLVMED FAEE+K+
Sbjct: 564  LYQEALMVGIKANRDFLCLSFELEQGETLGLVASVDPEDSEGCISWWLVMEDSFAEEQKL 623

Query: 1518 RADIFEGGLEYRKFLGYPNLELLYSTLMDLVSMCNGG 1628
              +I +G  EYRKFLG+ +L+LLY+TL+DLV +C+GG
Sbjct: 624  HMNITDGASEYRKFLGHLSLDLLYATLIDLVGLCSGG 660


>ref|XP_003549778.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            17-like isoform X1 [Glycine max]
            gi|571535792|ref|XP_006600757.1| PREDICTED: mediator of
            RNA polymerase II transcription subunit 17-like isoform
            X2 [Glycine max]
          Length = 660

 Score =  658 bits (1697), Expect = 0.0
 Identities = 351/574 (61%), Positives = 424/574 (73%), Gaps = 31/574 (5%)
 Frame = +3

Query: 3    HQELSVIIDLINTVEANDVVTVAGMTKPKPLPNETLSDLAVSAATKLHCFRHLGKYFKQS 182
            HQELSVIIDLINTVEAND VTVA MT+PK LPNE LSDLAVSAATKL C+RH+GKYFKQS
Sbjct: 87   HQELSVIIDLINTVEANDAVTVASMTRPKLLPNEALSDLAVSAATKLQCYRHVGKYFKQS 146

Query: 183  AKALEQKIGREARFYGSLIRLQQNWKVKRQRLAASAPGNEGFTIDLYDNSLYDPAVVIRP 362
            AKA EQ++ REARFYG+LIRLQQNWKVKRQR AA  PGNEGFT DL DNS YD A +IR 
Sbjct: 147  AKAFEQQVAREARFYGALIRLQQNWKVKRQRQAAIVPGNEGFTFDLLDNS-YDQAAIIRS 205

Query: 363  -SMSIVRVDHDSAGMLAVRLPPNSCRSLHFGFFGAH------------SQFSVEYSSKET 503
             SMS VRV+HD+AGMLA+ + P+ C SL FGF GA             S FS E++  E 
Sbjct: 206  LSMSTVRVNHDAAGMLAINVSPDLCHSLQFGFVGAQSDDTWRKSNENKSHFSGEHNLGEM 265

Query: 504  KKDSPSDDDECVKETHSILREVHQAIFAEQVFDLVNREAFSPSIGVNVTGIRENYLQLSV 683
             ++S S D+ECVK+T+S+LREVH+AIF EQVFDLVNREAF+   GV+VTGIRENYLQLS+
Sbjct: 266  GEESLS-DEECVKKTNSLLREVHEAIFNEQVFDLVNREAFNTVAGVSVTGIRENYLQLSL 324

Query: 684  GQEASVFILLMASGKDGENDDKADTQKLETAVLPSDD------EVKLVEVKKSAFPNRIS 845
            GQ  SV++ L+++ +D    +      +E A+LP +       E K    KK  F N I 
Sbjct: 325  GQGTSVYLTLVSNSQDHSTVEDELNDNVENAILPLESSDGMKREAKQNTSKKGQFSNSIC 384

Query: 846  FEIYLQQIFHEHAFVRGKDKTIPSGRGQSTKEEKFG--LLGHFCMSLSHRIFSNKVVTEL 1019
            +EIY+QQIFHEH F +G +K I SG   S  + + G  LLGHF  SL+HRIFS KV+ EL
Sbjct: 385  YEIYIQQIFHEHIFGKGDEKAISSGNRLSGVQARDGSSLLGHFFKSLAHRIFSTKVLAEL 444

Query: 1020 ESLVCWVPYLHLITHPTWHSRTSSWTLSMKVPQSIL----------HMKNAIKSQFRTKV 1169
            E++VC VPYL LI++PTW+SR SSWTL M+VPQSIL          + KNA K QF TKV
Sbjct: 445  ENVVCKVPYLQLISNPTWNSRASSWTLYMEVPQSILRGSQTKTSDYYEKNAAKRQFWTKV 504

Query: 1170 VVTDDSISVEGEGGPNVVGLFKTFSEDMCSMNKYECDLADLPVTLLQQVASQVIRWLHEE 1349
            VV DD I+V+ EG PNV GLFK   E+  S+NKY C+LADLPV +LQQVASQ+I WL++E
Sbjct: 505  VVNDDCINVKAEGSPNVAGLFKGKIEETHSINKYNCNLADLPVIILQQVASQIINWLYQE 564

Query: 1350 ALMVGIKASRDFLCLSFEVAQGEMISLVAHVDPKDERGYISWWLVMEDGFAEERKIRADI 1529
            A+MVGIK +RDFLCLS E+ QGE + LVA VDP+D    ISWWLVMED FAEE+K+   I
Sbjct: 565  AMMVGIKVNRDFLCLSLELKQGETLGLVASVDPEDSEECISWWLVMEDSFAEEQKLHMSI 624

Query: 1530 FEGGLEYRKFLGYPNLELLYSTLMDLVSMCNGGG 1631
             +G  EYRKFLG+ +L+LLY+TL+DLV +C+GGG
Sbjct: 625  TDGASEYRKFLGHLSLDLLYATLIDLVGLCSGGG 658


>ref|XP_006400585.1| hypothetical protein EUTSA_v10012923mg [Eutrema salsugineum]
            gi|557101675|gb|ESQ42038.1| hypothetical protein
            EUTSA_v10012923mg [Eutrema salsugineum]
          Length = 650

 Score =  645 bits (1663), Expect = 0.0
 Identities = 346/573 (60%), Positives = 424/573 (73%), Gaps = 29/573 (5%)
 Frame = +3

Query: 3    HQELSVIIDLINTVEANDVVTVAGMTKPKPLPNETLSDLAVSAATKLHCFRHLGKYFKQS 182
            HQELSVIIDLINTVEAND VTVAGMTKPKP+PNE LSDLAVS ATKL  +RHLGKYFKQS
Sbjct: 86   HQELSVIIDLINTVEANDAVTVAGMTKPKPMPNELLSDLAVSTATKLQSYRHLGKYFKQS 145

Query: 183  AKALEQKIGREARFYGSLIRLQQNWKVKRQRLAASAPGNEGFTIDLYDNSLYDPAVVIRP 362
            AKALEQK+ REARFYG+LIRLQ+NWKVKRQR+ AS   NEGFTIDL D+SLYDP    RP
Sbjct: 146  AKALEQKVNREARFYGALIRLQRNWKVKRQRVLASNASNEGFTIDLSDSSLYDPTSGFRP 205

Query: 363  S-MSIVRVDHDSAGMLAVRLPPNSCRSLHFGFFGAHS----QFSVEYSSKETKKDSPSD- 524
            S +S +RV+HDSAGMLA+ LP +S  SL FGF G +S      S E+    T +D+ S+ 
Sbjct: 206  STLSTIRVEHDSAGMLAINLPQDSWYSLRFGFVGLNSIDNPNESAEHIDSTTGQDTTSEK 265

Query: 525  ----DDECVKETHSILREVHQAIFAEQVFDLVNREAFSPSIGVNVTGIRENYLQLSVGQE 692
                D+E VKETHS+LREVH++IFAEQ+FD++NREAFS  +G +++GIREN+L++S+GQ 
Sbjct: 266  LSVSDEESVKETHSLLREVHKSIFAEQLFDMLNREAFSEGVGFSISGIRENFLEMSIGQG 325

Query: 693  ASVFILLMASGKDGENDDKADTQKLETAVLP--SDDEVKLVE----VKKSAFPNRISFEI 854
            AS+F+ L  SGK+      A  +K E+A++P  S   ++LVE    VKK  FP+R S++I
Sbjct: 326  ASLFVSLYPSGKN------ASIKKSESAIVPMESSGGIELVEGDSRVKKLGFPSRASYDI 379

Query: 855  YLQQIFHEHAFVRGKDKT---IPSGRGQSTKEEKFGLLGHFCMSLSHRIFSNKVVTELES 1025
            YLQQIFHEH F + KD+T         Q+ K+   GLL HFC+SL+HRIFS +VV +LES
Sbjct: 380  YLQQIFHEHVFGKAKDQTKSKSSQASNQTAKDNNSGLLDHFCLSLAHRIFSTRVVVQLES 439

Query: 1026 LVCWVPYLHLITHPTWHSRTSSWTLSMKVPQSI----------LHMKNAIKSQFRTKVVV 1175
            +VC VPYLHLI+HPTW+SRTSSWT+ M VP SI          L  K  +K+QFRTKVVV
Sbjct: 440  VVCKVPYLHLISHPTWNSRTSSWTVCMTVPPSIIPQGSSETQSLDGKRNLKTQFRTKVVV 499

Query: 1176 TDDSISVEGEGGPNVVGLFKTFSEDMCSMNKYECDLADLPVTLLQQVASQVIRWLHEEAL 1355
             DD ISVE E  PNVVGL K+ S ++ SMNKYECDLADLPV +LQQV SQ++ WL EEA 
Sbjct: 500  KDDCISVEAECTPNVVGLLKSSSCNLFSMNKYECDLADLPVIILQQVTSQIVCWLLEEAR 559

Query: 1356 MVGIKASRDFLCLSFEVAQGEMISLVAHVDPKDERGYISWWLVMEDGFAEERKIRADIFE 1535
             VG KASRDFL LS E+ +GE +SLVA V+P+D +G ISWWLVME+G  EERK       
Sbjct: 560  TVGTKASRDFLSLSLEIVEGERVSLVAQVNPEDAKGCISWWLVMENGCTEERK------- 612

Query: 1536 GGLEYRKFLGYPNLELLYSTLMDLVSMCNGGGN 1634
            G  E RK LG+ +L++LYS LMDL+++C  G N
Sbjct: 613  GVSESRKLLGHLSLDVLYSVLMDLINLCGSGRN 645


>ref|XP_003609292.1| hypothetical protein MTR_4g114100 [Medicago truncatula]
            gi|355510347|gb|AES91489.1| hypothetical protein
            MTR_4g114100 [Medicago truncatula]
          Length = 856

 Score =  632 bits (1630), Expect = e-178
 Identities = 343/574 (59%), Positives = 413/574 (71%), Gaps = 31/574 (5%)
 Frame = +3

Query: 3    HQELSVIIDLINTVEANDVVTVAGMTKPKPLPNETLSDLAVSAATKLHCFRHLGKYFKQS 182
            HQELSVIID INTVE ND VTVA MT+PK LPNE LSDLAVSAATKL C+R +GKYFKQS
Sbjct: 85   HQELSVIIDFINTVETNDAVTVASMTRPKSLPNEALSDLAVSAATKLQCYRQVGKYFKQS 144

Query: 183  AKALEQKIGREARFYGSLIRLQQNWKVKRQRLAASAPGNEGFTIDLYDNSLYDPAVVIRP 362
            AKA EQ++ REARFYG+LIRLQQNWKVKRQR  +  PGNEGFT DL+DNS    A+V   
Sbjct: 145  AKAFEQQVAREARFYGALIRLQQNWKVKRQRQTSLVPGNEGFTFDLFDNSYDQGAIVRSS 204

Query: 363  SMSIVRVDHDSAGMLAVRLPPNSCRSLHFGFFGAHSQFSVEYSSK------------ETK 506
            SMS VRV+HD+AGMLA+ + P  C SL FGF  A      + S++            ET 
Sbjct: 205  SMSTVRVNHDAAGMLAINVSPELCHSLQFGFVSAQPDDMQKKSNENQSHLLGEDCLGETG 264

Query: 507  KDSPSDDDECVKETHSILREVHQAIFAEQVFDLVNREAFSPSIGVNVTGIRENYLQLSVG 686
             +S S D+ECVK+THS+LR+VHQAIF EQVFDLVNREAF+ S G  +TGIRENYLQLS+G
Sbjct: 265  IES-SSDEECVKKTHSLLRDVHQAIFNEQVFDLVNREAFNTSTGFTLTGIRENYLQLSLG 323

Query: 687  QEASVFILLMASGKD-----GENDDKADT---QKLETAVLPSDDEVKLVEVKKSAFPNRI 842
            Q  SV++ L+++G+D     GE  + AD      LE++ +   D  +    KK    N  
Sbjct: 324  QGTSVYLSLVSTGQDNPTVEGELTNNADDNAFSPLESSDVLMHDAQQNTLKKKGRHSNST 383

Query: 843  SFEIYLQQIFHEHAFVRGKDKTIPSGRGQSTKEEKFG--LLGHFCMSLSHRIFSNKVVTE 1016
             +EIY+QQI+HEH F RG +K I SG   S  + K G  LL HF MSL+HRIFS K++ E
Sbjct: 384  CYEIYIQQIYHEHIFGRGSEKPISSGNRLSGAQAKDGSYLLSHFFMSLAHRIFSTKILAE 443

Query: 1017 LESLVCWVPYLHLITHPTWHSRTSSWTLSMKVPQSILH---------MKNAIKSQFRTKV 1169
            LE++V  VPYL LI++PTWHSR SSWTL M+VP SIL            NAIK QF TKV
Sbjct: 444  LENVVFKVPYLQLISNPTWHSRGSSWTLFMEVPPSILRGCQVKTSDFENNAIKRQFWTKV 503

Query: 1170 VVTDDSISVEGEGGPNVVGLFKTFSEDMCSMNKYECDLADLPVTLLQQVASQVIRWLHEE 1349
            VV DD ISV+ EG PNV GLFK  SED  S+NKY+C+LADLPV +LQQVASQ+I WL+ E
Sbjct: 504  VVIDDCISVKAEGSPNVSGLFKGKSEDTHSINKYDCNLADLPVIILQQVASQIINWLYHE 563

Query: 1350 ALMVGIKASRDFLCLSFEVAQGEMISLVAHVDPKDERGYISWWLVMEDGFAEERKIRADI 1529
            ALMVGIKA+RDFLCLSFE+ QGE + LVA+VDPKD  G ISW LVMED FAE +K+  ++
Sbjct: 564  ALMVGIKANRDFLCLSFELEQGETLGLVANVDPKDSDGCISWSLVMEDSFAEVQKLHTNL 623

Query: 1530 FEGGLEYRKFLGYPNLELLYSTLMDLVSMCNGGG 1631
             +G  EYRKFLG  +LELLY+TL+DL++  +GGG
Sbjct: 624  TDGASEYRKFLGPLSLELLYATLIDLIAFVSGGG 657


>ref|XP_004508515.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            17-like isoform X1 [Cicer arietinum]
            gi|502151591|ref|XP_004508516.1| PREDICTED: mediator of
            RNA polymerase II transcription subunit 17-like isoform
            X2 [Cicer arietinum] gi|502151593|ref|XP_004508517.1|
            PREDICTED: mediator of RNA polymerase II transcription
            subunit 17-like isoform X3 [Cicer arietinum]
            gi|502151595|ref|XP_004508518.1| PREDICTED: mediator of
            RNA polymerase II transcription subunit 17-like isoform
            X4 [Cicer arietinum]
          Length = 658

 Score =  631 bits (1627), Expect = e-178
 Identities = 342/575 (59%), Positives = 419/575 (72%), Gaps = 31/575 (5%)
 Frame = +3

Query: 3    HQELSVIIDLINTVEANDVVTVAGMTKPKPLPNETLSDLAVSAATKLHCFRHLGKYFKQS 182
            HQELSVIIDLINTVEAND VTVA MT+PKPLPNE LSDLAVSAATKL C+R +GKYFKQS
Sbjct: 86   HQELSVIIDLINTVEANDAVTVASMTRPKPLPNEALSDLAVSAATKLQCYRQVGKYFKQS 145

Query: 183  AKALEQKIGREARFYGSLIRLQQNWKVKRQRLAASAPGNEGFTIDLYDNSLYDPAVVIRP 362
            AKA EQ++ REARFYG+LIRLQQNWKVKRQR A+  PGNEGFT DL+DNS YD   +IR 
Sbjct: 146  AKAFEQQLAREARFYGALIRLQQNWKVKRQRQASIVPGNEGFTFDLFDNS-YDQGAIIRS 204

Query: 363  S-MSIVRVDHDSAGMLAVRLPPNSCRSLHFGFFGAH-----------SQFSVEYSSKETK 506
            S MS VRV+HD+AGMLA+ + PN C SL FGF GA            S  S E+   ET 
Sbjct: 205  SPMSTVRVNHDAAGMLAINVSPNLCHSLEFGFVGAQLNMQKKSNENKSPLSDEHCLGETD 264

Query: 507  KDSPSDDDECVKETHSILREVHQAIFAEQVFDLVNREAFSPSIGVNVTGIRENYLQLSVG 686
             +S S D+E VK+THS+LR+VH+AIF EQVFDLVNREAF+ S G ++TG+RENYLQLS+G
Sbjct: 265  TES-SSDEEYVKKTHSLLRDVHKAIFNEQVFDLVNREAFNTSTGFSLTGLRENYLQLSLG 323

Query: 687  QEASVFILLMASGKDGENDDKADTQKLETAVLPSD-DEVKLVEVKKSAFPNR------IS 845
            Q  SV++ L+++G+D    +   T   E A  P D  ++ + + K++    +        
Sbjct: 324  QGTSVYLSLVSTGQDHPTVEGELTNNAENASSPLDSSDILMHDAKQNTLKKKGQHSISTC 383

Query: 846  FEIYLQQIFHEHAFVRGKDKTIPSGRGQSTKEEKFG--LLGHFCMSLSHRIFSNKVVTEL 1019
            +EIY+QQI+ EH F R  +K I SG   S  + K G  LLGHF MSL+HRIFS+K++ EL
Sbjct: 384  YEIYIQQIYQEHIFGRSSEKPISSGNRLSGAQAKDGSSLLGHFFMSLAHRIFSSKILAEL 443

Query: 1020 ESLVCWVPYLHLITHPTWHSRTSSWTLSMKVPQSILH----------MKNAIKSQFRTKV 1169
            E++V  VPYL LI++PTWHSR SSWTL M+VP SILH           KN+IK QF  KV
Sbjct: 444  ENVVFKVPYLQLISNPTWHSRGSSWTLFMEVPPSILHGCQIKTSDYCEKNSIKRQFWIKV 503

Query: 1170 VVTDDSISVEGEGGPNVVGLFKTFSEDMCSMNKYECDLADLPVTLLQQVASQVIRWLHEE 1349
            VV DD I+V+ EG PNV GLFK  SED  S+NKY+C+LADLPV +LQQVASQ+I WL+ E
Sbjct: 504  VVIDDRINVKAEGSPNVAGLFKGKSEDTHSINKYDCNLADLPVIILQQVASQIINWLYHE 563

Query: 1350 ALMVGIKASRDFLCLSFEVAQGEMISLVAHVDPKDERGYISWWLVMEDGFAEERKIRADI 1529
            ALMVGIKA+RDFLCLSFE+ QGE + LVA+VDP+D  G ISW LVMED FAE +K+  +I
Sbjct: 564  ALMVGIKANRDFLCLSFELEQGETLGLVANVDPEDTDGCISWSLVMEDSFAEVQKLHKNI 623

Query: 1530 FEGGLEYRKFLGYPNLELLYSTLMDLVSMCNGGGN 1634
              G  EYRKFLG  +L+LLY+TL+DL++   G G+
Sbjct: 624  TNGASEYRKFLGPLSLDLLYATLIDLIAFVGGCGH 658


>ref|NP_197517.3| RNA polymerase II transcription mediator [Arabidopsis thaliana]
            gi|395406781|sp|F4K460.1|MED17_ARATH RecName:
            Full=Mediator of RNA polymerase II transcription subunit
            17 gi|332005425|gb|AED92808.1| RNA polymerase II
            transcription mediator [Arabidopsis thaliana]
          Length = 653

 Score =  622 bits (1605), Expect = e-175
 Identities = 333/571 (58%), Positives = 419/571 (73%), Gaps = 27/571 (4%)
 Frame = +3

Query: 3    HQELSVIIDLINTVEANDVVTVAGMTKPKPLPNETLSDLAVSAATKLHCFRHLGKYFKQS 182
            HQEL+VIIDLI+TV+AND VTVAGMT+PKP+PNE LSDLAVS ATKL  +R+LG YFKQS
Sbjct: 86   HQELTVIIDLIDTVQANDAVTVAGMTRPKPMPNEILSDLAVSTATKLQGYRNLGNYFKQS 145

Query: 183  AKALEQKIGREARFYGSLIRLQQNWKVKRQRLAASAPGNEGFTIDLYDNSLYDPAVVIRP 362
            AKALEQKI REARFYG+LIRLQ+NWKVKRQR+ AS   NEGFTIDL D+SLYDP    RP
Sbjct: 146  AKALEQKINREARFYGALIRLQRNWKVKRQRMLASNASNEGFTIDLSDSSLYDPTSGFRP 205

Query: 363  S-MSIVRVDHDSAGMLAVRLPPNSCRSLHFGFFG----AHSQFSVEYSSKETKKDSP--- 518
            S +S +RVDHDSAGMLA+ +P +S  SL FG+ G     +S  S E+    T  D P   
Sbjct: 206  STLSTIRVDHDSAGMLAINVPQDSWYSLRFGYVGLNPIGNSNESDEHIDSTTGHDIPGTS 265

Query: 519  ----SDDDECVKETHSILREVHQAIFAEQVFDLVNREAFSPSIGVNVTGIRENYLQLSVG 686
                + DD+ VKETHS+LREVH++IFAEQ+FD++NREAF+  +G N++G+REN++++S+G
Sbjct: 266  EKLSASDDKYVKETHSLLREVHKSIFAEQLFDMLNREAFNEGVGFNISGLRENFMEMSIG 325

Query: 687  QEASVFILLMASGKDGE-NDDKADTQKLETAVLPSDDEVKLVEVKKSAFPNRISFEIYLQ 863
            Q AS+F+ L  SGK+      ++ T  +E++      E     +KK  FPNR S+EIYLQ
Sbjct: 326  QGASLFVSLHPSGKNPSIKKSESATLLIESSGRVEPAEGGDYRLKKLGFPNRTSYEIYLQ 385

Query: 864  QIFHEHAFVRGKD----KTIPSGRGQSTKEEKFGLLGHFCMSLSHRIFSNKVVTELESLV 1031
            QIFHEHAF + KD    K+I +   Q+ K+   GLL HFC+SL+HRIFSN+V+  LES+V
Sbjct: 386  QIFHEHAFGKAKDQLKSKSIRAS-NQTEKDSNSGLLDHFCLSLTHRIFSNRVLVHLESVV 444

Query: 1032 CWVPYLHLITHPTWHSRTSSWTLSMKVPQSILHM----------KNAIKSQFRTKVVVTD 1181
            C VPYLHLI+HPTW+SRTSSWT+ M VP SI+            K  +K+QFRTKVVV D
Sbjct: 445  CKVPYLHLISHPTWNSRTSSWTVFMTVPPSIIPQGRSETQSPDGKRNLKTQFRTKVVVKD 504

Query: 1182 DSISVEGEGGPNVVGLFKTFSEDMCSMNKYECDLADLPVTLLQQVASQVIRWLHEEALMV 1361
            D ISVE E  PNVVGL K+ S ++ S+NKYECD+ADLPV +LQQVASQ++ WL EEA  V
Sbjct: 505  DCISVEAECTPNVVGLLKSSSCNLFSINKYECDVADLPVMILQQVASQIVCWLLEEARTV 564

Query: 1362 GIKASRDFLCLSFEVAQGEMISLVAHVDPKDERGYISWWLVMEDGFAEERKIRADIFEGG 1541
            G KASR+FL LS E+ +GE +SLVAHV+P+D +G ISWWLVME+G  EER       EG 
Sbjct: 565  GTKASREFLSLSLEIVEGERVSLVAHVNPEDAKGCISWWLVMENGCTEER-------EGV 617

Query: 1542 LEYRKFLGYPNLELLYSTLMDLVSMCNGGGN 1634
             E RK LG+ +L++LYS LMDL+++C  G N
Sbjct: 618  SESRKLLGHLSLDVLYSVLMDLINLCGTGRN 648