BLASTX nr result

ID: Paeonia24_contig00042374 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia24_contig00042374
         (280 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004301329.1| PREDICTED: uncharacterized protein LOC101296...    71   2e-10
gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa]               58   1e-06
emb|CAN65855.1| hypothetical protein VITISV_013124 [Vitis vinifera]    57   3e-06

>ref|XP_004301329.1| PREDICTED: uncharacterized protein LOC101296391 [Fragaria vesca
           subsp. vesca]
          Length = 323

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 30/57 (52%), Positives = 42/57 (73%), Gaps = 3/57 (5%)
 Frame = +3

Query: 102 GSKPGNS---NHHTRPTCQICERIGHTDIDCYDRMNIAFEGRIPAKKLMAMIASSST 263
           G  P +S   N+  RPTCQIC + GHT +DCY+R+N++F+GR+P++ L AM AS ST
Sbjct: 165 GPHPSSSSLFNNQARPTCQICSKTGHTALDCYNRLNLSFQGRVPSRNLSAMAASGST 221


>gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa]
          Length = 1384

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 27/52 (51%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
 Frame = +3

Query: 114 GNSNHHT-RPTCQICERIGHTDIDCYDRMNIAFEGRIPAKKLMAMIASSSTS 266
           GNS  +T R  CQIC R GH+ IDC++R+N+++EGR+P+ +L AM A  S S
Sbjct: 293 GNSFFNTGRIQCQICSRPGHSAIDCFNRLNLSYEGRVPSSRLNAMTAHHSPS 344


>emb|CAN65855.1| hypothetical protein VITISV_013124 [Vitis vinifera]
          Length = 456

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 24/54 (44%), Positives = 37/54 (68%)
 Frame = +3

Query: 105 SKPGNSNHHTRPTCQICERIGHTDIDCYDRMNIAFEGRIPAKKLMAMIASSSTS 266
           S P + +  +R  CQIC+R  H  +DCY+RMN AF+GR P  +L+AM+  ++T+
Sbjct: 275 SPPVSHDSRSRSPCQICKRENHQALDCYNRMNYAFQGRHPPIELVAMVVEANTT 328


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