BLASTX nr result

ID: Paeonia24_contig00039551 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia24_contig00039551
         (253 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006445527.1| hypothetical protein CICLE_v10004111mg [Citr...    65   1e-08
ref|XP_003618685.1| Photosystem I assembly protein ycf3 [Medicag...    56   6e-06
ref|NP_671841.1| uncharacterized protein [Arabidopsis thaliana] ...    55   8e-06

>ref|XP_006445527.1| hypothetical protein CICLE_v10004111mg [Citrus clementina]
           gi|557547807|gb|ESR58767.1| hypothetical protein
           CICLE_v10004111mg [Citrus clementina]
          Length = 58

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 28/34 (82%), Positives = 30/34 (88%)
 Frame = +1

Query: 1   PFLI*IGTNKNGWDSKNPSRSYFGYPYNHRRLLK 102
           PFL  IGT KNGWD+K+PSRSY GYPYNHRRLLK
Sbjct: 25  PFLSGIGTKKNGWDNKHPSRSYCGYPYNHRRLLK 58


>ref|XP_003618685.1| Photosystem I assembly protein ycf3 [Medicago truncatula]
           gi|358344504|ref|XP_003636329.1| Photosystem I assembly
           protein ycf3 [Medicago truncatula]
           gi|358349399|ref|XP_003638725.1| Photosystem I assembly
           protein ycf3 [Medicago truncatula]
           gi|355493700|gb|AES74903.1| Photosystem I assembly
           protein ycf3 [Medicago truncatula]
           gi|355502264|gb|AES83467.1| Photosystem I assembly
           protein ycf3 [Medicago truncatula]
           gi|355504660|gb|AES85863.1| Photosystem I assembly
           protein ycf3 [Medicago truncatula]
          Length = 66

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 22/24 (91%), Positives = 24/24 (100%)
 Frame = +1

Query: 31  NGWDSKNPSRSYFGYPYNHRRLLK 102
           NGWD+K+PSRSYFGYPYNHRRLLK
Sbjct: 43  NGWDNKHPSRSYFGYPYNHRRLLK 66


>ref|NP_671841.1| uncharacterized protein [Arabidopsis thaliana]
           gi|330251116|gb|AEC06210.1| uncharacterized protein
           AT2G12905 [Arabidopsis thaliana]
          Length = 72

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 21/28 (75%), Positives = 26/28 (92%)
 Frame = +1

Query: 4   FLI*IGTNKNGWDSKNPSRSYFGYPYNH 87
           F + IGTN+NGW++K+PSRSYFGYPYNH
Sbjct: 45  FFVGIGTNQNGWNNKHPSRSYFGYPYNH 72


Top