BLASTX nr result

ID: Paeonia24_contig00039473 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia24_contig00039473
         (248 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD28670.2| RNA-directed DNA polymerase (Reverse transcriptas...    74   3e-11
gb|ABD32279.2| reverse transcriptase, putative [Medicago truncat...    72   8e-11
ref|XP_004296004.1| PREDICTED: putative ribonuclease H protein A...    71   1e-10
gb|ABD32264.2| RNA-directed DNA polymerase , putative [Medicago ...    70   4e-10
ref|XP_004309110.1| PREDICTED: putative ribonuclease H protein A...    69   7e-10
gb|ABN09154.1| RNA-directed DNA polymerase (Reverse transcriptas...    69   7e-10
ref|XP_007213453.1| hypothetical protein PRUPE_ppa024777mg, part...    63   4e-08
ref|XP_004305739.1| PREDICTED: uncharacterized protein LOC101306...    62   8e-08

>gb|ABD28670.2| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 642

 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 35/77 (45%), Positives = 49/77 (63%)
 Frame = -1

Query: 239 YRGAPILKGSPKKIHFLDIVGRIRAKLRSWRVSKLSLASRVELLKHVF*AMLLYTFYIYL 60
           Y GAPI KG PK IHF  I  +++AKL  W+ S LS+A R++L+K V  +ML++T  IY 
Sbjct: 496 YLGAPIFKGKPKGIHFQPIADKVKAKLAKWKASLLSIAGRIQLVKSVVQSMLVHTMSIYS 555

Query: 59  WSKGLLDYLTILFKNFL 9
           W   +L  +    KNF+
Sbjct: 556 WPIKILKEMEKWIKNFI 572


>gb|ABD32279.2| reverse transcriptase, putative [Medicago truncatula]
          Length = 480

 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 35/77 (45%), Positives = 47/77 (61%)
 Frame = -1

Query: 239 YRGAPILKGSPKKIHFLDIVGRIRAKLRSWRVSKLSLASRVELLKHVF*AMLLYTFYIYL 60
           Y G PI KG  K I+F  IV RI+ K   W+ + LS+  RVEL+K +   ML+Y+F IY+
Sbjct: 224 YLGCPIFKGKLKGIYFQSIVDRIKVKFAIWKCTLLSIMGRVELVKSIIHGMLVYSFQIYM 283

Query: 59  WSKGLLDYLTILFKNFL 9
           W + LL  L    KNF+
Sbjct: 284 WPRRLLHQLDSWIKNFI 300


>ref|XP_004296004.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
           vesca subsp. vesca]
          Length = 751

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 33/77 (42%), Positives = 50/77 (64%)
 Frame = -1

Query: 239 YRGAPILKGSPKKIHFLDIVGRIRAKLRSWRVSKLSLASRVELLKHVF*AMLLYTFYIYL 60
           Y G PI KG P + H   +V + +A+L  W+   LS+A RV+L+  VF +MLL++F IYL
Sbjct: 195 YLGVPIFKGKPCRKHLQALVDKAKARLAGWKGKLLSMAGRVQLVHDVFQSMLLHSFSIYL 254

Query: 59  WSKGLLDYLTILFKNFL 9
           W+  LL +L+   +NF+
Sbjct: 255 WATSLLSHLSACARNFI 271


>gb|ABD32264.2| RNA-directed DNA polymerase , putative [Medicago truncatula]
          Length = 161

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 35/77 (45%), Positives = 47/77 (61%)
 Frame = -1

Query: 239 YRGAPILKGSPKKIHFLDIVGRIRAKLRSWRVSKLSLASRVELLKHVF*AMLLYTFYIYL 60
           Y G PI KG PK IH   IV +I AKL +W+ S LS+A RV+++K V  +ML ++  +Y 
Sbjct: 37  YLGVPIFKGKPKVIHLQPIVDKIIAKLSTWKASLLSIAGRVQMVKSVIQSMLTHSITVYN 96

Query: 59  WSKGLLDYLTILFKNFL 9
           W   LL  L    KNF+
Sbjct: 97  WPTSLLKDLEKSIKNFI 113


>ref|XP_004309110.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
           vesca subsp. vesca]
          Length = 872

 Score = 68.9 bits (167), Expect = 7e-10
 Identities = 35/77 (45%), Positives = 47/77 (61%)
 Frame = -1

Query: 239 YRGAPILKGSPKKIHFLDIVGRIRAKLRSWRVSKLSLASRVELLKHVF*AMLLYTFYIYL 60
           Y GAPI  G P+  HF  IV ++R KL SW  S LS+A R++L+K V  +M +YTF +Y 
Sbjct: 255 YLGAPIFHGKPRVAHFQAIVDKVRLKLSSWVGSFLSMAGRLQLIKSVIYSMFVYTFQVYE 314

Query: 59  WSKGLLDYLTILFKNFL 9
           W   LL  +    +NFL
Sbjct: 315 WPVSLLRKVERWCRNFL 331


>gb|ABN09154.1| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 528

 Score = 68.9 bits (167), Expect = 7e-10
 Identities = 35/77 (45%), Positives = 47/77 (61%)
 Frame = -1

Query: 239 YRGAPILKGSPKKIHFLDIVGRIRAKLRSWRVSKLSLASRVELLKHVF*AMLLYTFYIYL 60
           Y G PI KG PK      IV +I+ KL +W+ S LS+A RV+L+K V  +ML++T  IY 
Sbjct: 402 YLGVPIFKGKPKARFLQPIVDKIKTKLSNWKASILSIAGRVQLIKSVAQSMLIHTITIYD 461

Query: 59  WSKGLLDYLTILFKNFL 9
           W   LL  L   F+NF+
Sbjct: 462 WPSFLLKELETCFRNFI 478


>ref|XP_007213453.1| hypothetical protein PRUPE_ppa024777mg, partial [Prunus persica]
           gi|462409318|gb|EMJ14652.1| hypothetical protein
           PRUPE_ppa024777mg, partial [Prunus persica]
          Length = 465

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 32/69 (46%), Positives = 45/69 (65%)
 Frame = -1

Query: 215 GSPKKIHFLDIVGRIRAKLRSWRVSKLSLASRVELLKHVF*AMLLYTFYIYLWSKGLLDY 36
           G P+ I+F  I  +IR++L SW+ S+LSLA R++LLK V  +ML+Y F IY W   LL  
Sbjct: 1   GKPRAIYFQGIADKIRSQLSSWKGSQLSLAGRLQLLKSVVASMLVYNFQIYEWPMSLLRK 60

Query: 35  LTILFKNFL 9
           +    +NFL
Sbjct: 61  IEPWCRNFL 69


>ref|XP_004305739.1| PREDICTED: uncharacterized protein LOC101306660 [Fragaria vesca
           subsp. vesca]
          Length = 330

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 30/79 (37%), Positives = 47/79 (59%)
 Frame = -1

Query: 239 YRGAPILKGSPKKIHFLDIVGRIRAKLRSWRVSKLSLASRVELLKHVF*AMLLYTFYIYL 60
           Y G PI  G PK+++F  +  RIR  + +W+ + LS+A RV L+  V  +ML ++F IY 
Sbjct: 120 YLGVPIFVGRPKRVYFQVLTDRIRNAMSNWKGNSLSMAGRVTLVNSVVISMLSHSFTIYA 179

Query: 59  WSKGLLDYLTILFKNFL*T 3
           W K +L  +    +NF+ T
Sbjct: 180 WPKTVLQQVRNWIRNFIWT 198


Top