BLASTX nr result
ID: Paeonia24_contig00039320
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Paeonia24_contig00039320
(503 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_008963723.1| RNA polymerase alpha subunit (chloroplast) [... 266 2e-69
gb|ADD31230.1| RNA polymerase alpha subunit protein [Liquidambar... 266 2e-69
gb|ADD31229.1| RNA polymerase alpha subunit protein [Heuchera sa... 265 5e-69
gb|ADD31228.1| RNA polymerase alpha subunit protein [Gunnera man... 265 6e-69
gb|ADD31223.1| RNA polymerase alpha subunit protein [Berberidops... 263 2e-68
ref|YP_740597.1| RNA polymerase alpha subunit [Platanus occident... 263 2e-68
ref|YP_004021697.1| RNA polymerase alpha subunit [Prunus persica... 261 5e-68
gb|AFS89573.1| RNA polymerase alpha subunit (chloroplast) [Fraga... 260 1e-67
ref|YP_004286134.1| RNA polymerase alpha subunit [Fragaria vesca... 260 1e-67
ref|YP_004021348.1| RNA polymerase alpha subunit [Theobroma caca... 260 1e-67
gb|ADD31234.1| RNA polymerase alpha subunit protein [Staphylea c... 260 1e-67
ref|YP_001671715.1| RNA polymerase alpha subunit [Carica papaya]... 260 1e-67
gb|ADD31215.1| RNA polymerase alpha subunit protein [Ilex cornuta] 260 2e-67
ref|YP_005296132.1| rpoA gene product (chloroplast) [Pentactina ... 259 3e-67
ref|YP_008965524.1| RNA polymerase alpha subunit [Pyrus spinosa]... 259 4e-67
ref|YP_008963511.1| RNA polymerase alpha subunit (chloroplast) [... 258 5e-67
gb|ADM14340.1| RNA polymerase alpha subunit [Punica granatum] 258 5e-67
ref|YP_001687169.1| RNA polymerase alpha subunit [Oenothera argi... 258 5e-67
ref|NP_084725.2| RNA polymerase alpha subunit [Oenothera elata s... 258 5e-67
ref|YP_008081297.1| RNA polymerase alpha subunit (chloroplast) [... 258 6e-67
>ref|YP_008963723.1| RNA polymerase alpha subunit (chloroplast) [Liquidambar formosana]
gi|491650402|gb|AGL13462.1| RNA polymerase alpha subunit
(chloroplast) [Liquidambar formosana]
Length = 337
Score = 266 bits (681), Expect = 2e-69
Identities = 134/142 (94%), Positives = 136/142 (95%)
Frame = +2
Query: 77 MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLKKGQADTIGVAMRRALLGEIEGT 256
MVREKVTVSTRTLQWKCVESR DSKRLYYGRFILSPL KGQADTIG+AMRRALLGEIEGT
Sbjct: 1 MVREKVTVSTRTLQWKCVESRADSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 257 CITRAKFEKIPHEYSTIVGIQESVHEILMNLKEVVLRSNLYGIRNASICVRGPGYVTAQD 436
CITRAK EKIPHEYSTIVGIQESVHEILMNLKEVVLRSNLYG R+ASICVRGPGYVTAQD
Sbjct: 61 CITRAKSEKIPHEYSTIVGIQESVHEILMNLKEVVLRSNLYGTRDASICVRGPGYVTAQD 120
Query: 437 IASPPSVEIVDNTQHIASLKEP 502
I SPPSVEIVDNTQHIASL EP
Sbjct: 121 IISPPSVEIVDNTQHIASLTEP 142
>gb|ADD31230.1| RNA polymerase alpha subunit protein [Liquidambar styraciflua]
Length = 338
Score = 266 bits (681), Expect = 2e-69
Identities = 134/142 (94%), Positives = 136/142 (95%)
Frame = +2
Query: 77 MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLKKGQADTIGVAMRRALLGEIEGT 256
MVREKVTVSTRTLQWKCVESR DSKRLYYGRFILSPL KGQADTIG+AMRRALLGEIEGT
Sbjct: 1 MVREKVTVSTRTLQWKCVESRADSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 257 CITRAKFEKIPHEYSTIVGIQESVHEILMNLKEVVLRSNLYGIRNASICVRGPGYVTAQD 436
CITRAK EKIPHEYSTIVGIQESVHEILMNLKEVVLRSNLYG R+ASICVRGPGYVTAQD
Sbjct: 61 CITRAKSEKIPHEYSTIVGIQESVHEILMNLKEVVLRSNLYGTRDASICVRGPGYVTAQD 120
Query: 437 IASPPSVEIVDNTQHIASLKEP 502
I SPPSVEIVDNTQHIASL EP
Sbjct: 121 IISPPSVEIVDNTQHIASLTEP 142
>gb|ADD31229.1| RNA polymerase alpha subunit protein [Heuchera sanguinea]
Length = 337
Score = 265 bits (677), Expect = 5e-69
Identities = 133/142 (93%), Positives = 135/142 (95%)
Frame = +2
Query: 77 MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLKKGQADTIGVAMRRALLGEIEGT 256
MVREKVTVSTRTL+WKCVESR DSKRLYYGRFILSPL KGQADTIG+AMRRALLGEIEGT
Sbjct: 1 MVREKVTVSTRTLEWKCVESRADSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 257 CITRAKFEKIPHEYSTIVGIQESVHEILMNLKEVVLRSNLYGIRNASICVRGPGYVTAQD 436
CITRAK EKIPHEYSTIVGIQESVHEILMNLKEVVLRSNLYG RNASICV GPGYVTAQD
Sbjct: 61 CITRAKSEKIPHEYSTIVGIQESVHEILMNLKEVVLRSNLYGTRNASICVSGPGYVTAQD 120
Query: 437 IASPPSVEIVDNTQHIASLKEP 502
I SPPSVEIVDNTQHIASL EP
Sbjct: 121 IISPPSVEIVDNTQHIASLTEP 142
>gb|ADD31228.1| RNA polymerase alpha subunit protein [Gunnera manicata]
Length = 330
Score = 265 bits (676), Expect = 6e-69
Identities = 129/142 (90%), Positives = 137/142 (96%)
Frame = +2
Query: 77 MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLKKGQADTIGVAMRRALLGEIEGT 256
MVREK+TVSTRTLQWKCVESRTDSKRLYYGRFI+SPL KGQADTIG+AMRRALLGEIEGT
Sbjct: 1 MVREKITVSTRTLQWKCVESRTDSKRLYYGRFIMSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 257 CITRAKFEKIPHEYSTIVGIQESVHEILMNLKEVVLRSNLYGIRNASICVRGPGYVTAQD 436
CITRAK EKIPHEYSTIVGIQESVHEILMNLKE++L+SN+YG R+ASICVRGPGYVTAQD
Sbjct: 61 CITRAKSEKIPHEYSTIVGIQESVHEILMNLKEIILKSNIYGTRDASICVRGPGYVTAQD 120
Query: 437 IASPPSVEIVDNTQHIASLKEP 502
I SPPSVEIVDNTQHIASL EP
Sbjct: 121 IISPPSVEIVDNTQHIASLTEP 142
>gb|ADD31223.1| RNA polymerase alpha subunit protein [Berberidopsis corallina]
Length = 337
Score = 263 bits (672), Expect = 2e-68
Identities = 132/142 (92%), Positives = 135/142 (95%)
Frame = +2
Query: 77 MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLKKGQADTIGVAMRRALLGEIEGT 256
MVREKVTVSTRTLQWKCVESR DSKRLYYGRFILSPL KGQADTIG+AMRRALLGEIEGT
Sbjct: 1 MVREKVTVSTRTLQWKCVESRADSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 257 CITRAKFEKIPHEYSTIVGIQESVHEILMNLKEVVLRSNLYGIRNASICVRGPGYVTAQD 436
CITRAK EKIPHEYSTIVGIQESVHEILMNLKE+VLRSNLYG +ASICVRGPGYVTAQD
Sbjct: 61 CITRAKSEKIPHEYSTIVGIQESVHEILMNLKEIVLRSNLYGTCDASICVRGPGYVTAQD 120
Query: 437 IASPPSVEIVDNTQHIASLKEP 502
I SPPSVEIVDNTQHIASL EP
Sbjct: 121 IISPPSVEIVDNTQHIASLTEP 142
>ref|YP_740597.1| RNA polymerase alpha subunit [Platanus occidentalis]
gi|122166006|sp|Q09G14.1|RPOA_PLAOC RecName:
Full=DNA-directed RNA polymerase subunit alpha;
Short=PEP; AltName: Full=Plastid-encoded RNA polymerase
subunit alpha; Short=RNA polymerase subunit alpha
gi|114054417|gb|ABI49811.1| RNA polymerase alpha subunit
[Platanus occidentalis]
Length = 337
Score = 263 bits (671), Expect = 2e-68
Identities = 130/142 (91%), Positives = 135/142 (95%)
Frame = +2
Query: 77 MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLKKGQADTIGVAMRRALLGEIEGT 256
MVREKVTVSTRTLQWKCVESR DSKRLYYGRFILSPL KGQADTIG+AMRRALLGEIEGT
Sbjct: 1 MVREKVTVSTRTLQWKCVESRADSKRLYYGRFILSPLIKGQADTIGIAMRRALLGEIEGT 60
Query: 257 CITRAKFEKIPHEYSTIVGIQESVHEILMNLKEVVLRSNLYGIRNASICVRGPGYVTAQD 436
CITRAK EKIPHEYSTIVGI+ESVHEILMNLKE+VLRSNLYG RNASIC+RGPGYVTAQD
Sbjct: 61 CITRAKSEKIPHEYSTIVGIEESVHEILMNLKEIVLRSNLYGTRNASICIRGPGYVTAQD 120
Query: 437 IASPPSVEIVDNTQHIASLKEP 502
I SPPSVE VDNTQHIA+L EP
Sbjct: 121 IISPPSVETVDNTQHIANLTEP 142
>ref|YP_004021697.1| RNA polymerase alpha subunit [Prunus persica]
gi|595789798|ref|YP_009020071.1| RNA polymerase alpha
subunit [Prunus mume] gi|309321466|gb|ADO65007.1| RNA
polymerase alpha subunit [Prunus persica]
gi|589061084|gb|AHK26905.1| RNA polymerase alpha subunit
[Prunus mume] gi|597569138|gb|AHN13569.1| RNA polymerase
alpha subunit (chloroplast) [Prunus kansuensis]
Length = 326
Score = 261 bits (668), Expect = 5e-68
Identities = 128/142 (90%), Positives = 135/142 (95%)
Frame = +2
Query: 77 MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLKKGQADTIGVAMRRALLGEIEGT 256
MVREKVTVSTRTLQWKCVESR DSKRLYYGRFIL+PL KGQADTIG+AMRRALLGEIEGT
Sbjct: 1 MVREKVTVSTRTLQWKCVESRADSKRLYYGRFILAPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 257 CITRAKFEKIPHEYSTIVGIQESVHEILMNLKEVVLRSNLYGIRNASICVRGPGYVTAQD 436
CITRAK EKIPHEYSTI+GIQESVHEILMNLKE+VLRSNLYG RNASIC++GPGYVTAQD
Sbjct: 61 CITRAKSEKIPHEYSTIIGIQESVHEILMNLKEIVLRSNLYGTRNASICIKGPGYVTAQD 120
Query: 437 IASPPSVEIVDNTQHIASLKEP 502
I PPSVEIVDNTQHIA+L EP
Sbjct: 121 IILPPSVEIVDNTQHIANLTEP 142
>gb|AFS89573.1| RNA polymerase alpha subunit (chloroplast) [Fragaria chiloensis]
Length = 331
Score = 260 bits (665), Expect = 1e-67
Identities = 128/142 (90%), Positives = 134/142 (94%)
Frame = +2
Query: 77 MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLKKGQADTIGVAMRRALLGEIEGT 256
MVREKVTVSTRTLQWKCVESR DSKRLYYGRFIL+PL KGQADTIG+AMRRALLGEIEGT
Sbjct: 1 MVREKVTVSTRTLQWKCVESRADSKRLYYGRFILAPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 257 CITRAKFEKIPHEYSTIVGIQESVHEILMNLKEVVLRSNLYGIRNASICVRGPGYVTAQD 436
CITRAK EKIPHEYST VGIQESVHEILMNLKE+VLRSNLYG RNASICV+GPGYVTAQD
Sbjct: 61 CITRAKSEKIPHEYSTFVGIQESVHEILMNLKEIVLRSNLYGTRNASICVKGPGYVTAQD 120
Query: 437 IASPPSVEIVDNTQHIASLKEP 502
I PPS+EIVDNTQHIA+L EP
Sbjct: 121 IILPPSIEIVDNTQHIANLTEP 142
>ref|YP_004286134.1| RNA polymerase alpha subunit [Fragaria vesca subsp. vesca]
gi|408830277|ref|YP_006883295.1| RNA polymerase alpha
subunit (chloroplast) [Fragaria vesca subsp. bracteata]
gi|408830351|ref|YP_006883368.1| RNA polymerase alpha
subunit [Fragaria mandshurica]
gi|428697232|ref|YP_007025415.1| RNA polymerase alpha
subunit (chloroplast) [Fragaria chiloensis]
gi|428697318|ref|YP_007025500.1| RNA polymerase alpha
subunit (chloroplast) [Fragaria virginiana]
gi|324022809|gb|ADY15383.1| RNA polymerase alpha subunit
[Fragaria vesca subsp. vesca]
gi|357198771|gb|AET62687.1| RNA polymerase alpha subunit
(chloroplast) [Fragaria chiloensis]
gi|357198857|gb|AET62772.1| RNA polymerase alpha subunit
(chloroplast) [Fragaria virginiana]
gi|378554739|gb|AFC17674.1| RNA polymerase alpha subunit
(chloroplast) [Fragaria vesca subsp. bracteata]
gi|378554813|gb|AFC17747.1| RNA polymerase alpha subunit
[Fragaria mandshurica]
Length = 331
Score = 260 bits (665), Expect = 1e-67
Identities = 128/142 (90%), Positives = 134/142 (94%)
Frame = +2
Query: 77 MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLKKGQADTIGVAMRRALLGEIEGT 256
MVREKVTVSTRTLQWKCVESR DSKRLYYGRFIL+PL KGQADTIG+AMRRALLGEIEGT
Sbjct: 1 MVREKVTVSTRTLQWKCVESRADSKRLYYGRFILAPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 257 CITRAKFEKIPHEYSTIVGIQESVHEILMNLKEVVLRSNLYGIRNASICVRGPGYVTAQD 436
CITRAK EKIPHEYST VGIQESVHEILMNLKE+VLRSNLYG RNASICV+GPGYVTAQD
Sbjct: 61 CITRAKSEKIPHEYSTFVGIQESVHEILMNLKEIVLRSNLYGTRNASICVKGPGYVTAQD 120
Query: 437 IASPPSVEIVDNTQHIASLKEP 502
I PPS+EIVDNTQHIA+L EP
Sbjct: 121 IILPPSIEIVDNTQHIANLTEP 142
>ref|YP_004021348.1| RNA polymerase alpha subunit [Theobroma cacao]
gi|309321298|gb|ADO64841.1| RNA polymerase alpha subunit
[Theobroma cacao] gi|328924811|gb|ADO64922.2| RNA
polymerase alpha subunit [Theobroma cacao]
gi|371925968|gb|AEX57758.1| RNA polymerase alpha subunit
(chloroplast) [Theobroma cacao]
gi|371926050|gb|AEX57839.1| RNA polymerase alpha subunit
(chloroplast) [Theobroma cacao]
gi|371926132|gb|AEX57920.1| RNA polymerase alpha subunit
(chloroplast) [Theobroma cacao]
gi|371926214|gb|AEX58001.1| RNA polymerase alpha subunit
(chloroplast) [Theobroma cacao]
gi|371926296|gb|AEX58082.1| RNA polymerase alpha subunit
(chloroplast) [Theobroma cacao]
gi|371926378|gb|AEX58163.1| RNA polymerase alpha subunit
(chloroplast) [Theobroma cacao]
gi|371926460|gb|AEX58244.1| RNA polymerase alpha subunit
(chloroplast) [Theobroma cacao]
gi|371926542|gb|AEX58325.1| RNA polymerase alpha subunit
(chloroplast) [Theobroma cacao]
gi|371926624|gb|AEX58406.1| RNA polymerase alpha subunit
(chloroplast) [Theobroma cacao]
gi|371926788|gb|AEX58568.1| RNA polymerase alpha subunit
(chloroplast) [Theobroma cacao]
Length = 327
Score = 260 bits (665), Expect = 1e-67
Identities = 130/142 (91%), Positives = 133/142 (93%)
Frame = +2
Query: 77 MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLKKGQADTIGVAMRRALLGEIEGT 256
MVREKV VSTRTLQWKCVESRTDSKRLYYGRFILSPL KGQADTIG+AMRRALLGEIEGT
Sbjct: 1 MVREKVKVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 257 CITRAKFEKIPHEYSTIVGIQESVHEILMNLKEVVLRSNLYGIRNASICVRGPGYVTAQD 436
CITRAK EKIPHEYSTIVGIQESVHEILMNLKE+VLRSNLYG RNA IC +GPGYVTAQD
Sbjct: 61 CITRAKSEKIPHEYSTIVGIQESVHEILMNLKEIVLRSNLYGTRNAFICAKGPGYVTAQD 120
Query: 437 IASPPSVEIVDNTQHIASLKEP 502
I PPSVEIVDNTQHIASL EP
Sbjct: 121 IILPPSVEIVDNTQHIASLTEP 142
>gb|ADD31234.1| RNA polymerase alpha subunit protein [Staphylea colchica]
Length = 342
Score = 260 bits (665), Expect = 1e-67
Identities = 129/142 (90%), Positives = 134/142 (94%)
Frame = +2
Query: 77 MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLKKGQADTIGVAMRRALLGEIEGT 256
MVREKVTVSTRTLQWKCVESR D KRLYYGRFILSPL KGQADTIG+AMRRALLGEIEGT
Sbjct: 1 MVREKVTVSTRTLQWKCVESRADRKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 257 CITRAKFEKIPHEYSTIVGIQESVHEILMNLKEVVLRSNLYGIRNASICVRGPGYVTAQD 436
CITRAK EKIPHEYSTIVGIQESVHEILMNLKE+VLRSNLYG R+ASIC++GPGYVTAQD
Sbjct: 61 CITRAKSEKIPHEYSTIVGIQESVHEILMNLKEIVLRSNLYGTRDASICIKGPGYVTAQD 120
Query: 437 IASPPSVEIVDNTQHIASLKEP 502
I PPSVEIVDNTQHIASL EP
Sbjct: 121 IILPPSVEIVDNTQHIASLTEP 142
>ref|YP_001671715.1| RNA polymerase alpha subunit [Carica papaya]
gi|166344165|gb|ABY86815.1| RNA polymerase alpha chain
[Carica papaya]
Length = 327
Score = 260 bits (665), Expect = 1e-67
Identities = 130/142 (91%), Positives = 134/142 (94%)
Frame = +2
Query: 77 MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLKKGQADTIGVAMRRALLGEIEGT 256
MVREKV VSTRTLQWKCVESRTDSKRLYYGRFILSPL KGQADTIG+AMRRALLGEIEGT
Sbjct: 1 MVREKVKVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 257 CITRAKFEKIPHEYSTIVGIQESVHEILMNLKEVVLRSNLYGIRNASICVRGPGYVTAQD 436
CITRAK EKIPHEYSTIVGIQESVHEILMNLKE+VLRSNLYG R+A ICV+GPGYVTAQD
Sbjct: 61 CITRAKSEKIPHEYSTIVGIQESVHEILMNLKEIVLRSNLYGTRDAFICVKGPGYVTAQD 120
Query: 437 IASPPSVEIVDNTQHIASLKEP 502
I PPSVEIVDNTQHIASL EP
Sbjct: 121 IVLPPSVEIVDNTQHIASLTEP 142
>gb|ADD31215.1| RNA polymerase alpha subunit protein [Ilex cornuta]
Length = 337
Score = 260 bits (664), Expect = 2e-67
Identities = 130/142 (91%), Positives = 133/142 (93%)
Frame = +2
Query: 77 MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLKKGQADTIGVAMRRALLGEIEGT 256
MVREKVTVSTRTLQWKCVESR DSKRLYYGRFILSPL KGQADTIG+AMRRALLGEIEGT
Sbjct: 1 MVREKVTVSTRTLQWKCVESRADSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 257 CITRAKFEKIPHEYSTIVGIQESVHEILMNLKEVVLRSNLYGIRNASICVRGPGYVTAQD 436
CITRAKFEKIPHEYSTIVGIQESVHEILMNLKE+VLRSNLYG +ASICVRGPGYVT QD
Sbjct: 61 CITRAKFEKIPHEYSTIVGIQESVHEILMNLKEIVLRSNLYGTCDASICVRGPGYVTTQD 120
Query: 437 IASPPSVEIVDNTQHIASLKEP 502
I PP VEIVDNTQHIASL EP
Sbjct: 121 IILPPYVEIVDNTQHIASLTEP 142
>ref|YP_005296132.1| rpoA gene product (chloroplast) [Pentactina rupicola]
gi|371532654|gb|AEX31764.1| RNA polymerase alpha subunit
(chloroplast) [Pentactina rupicola]
Length = 326
Score = 259 bits (662), Expect = 3e-67
Identities = 129/142 (90%), Positives = 134/142 (94%)
Frame = +2
Query: 77 MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLKKGQADTIGVAMRRALLGEIEGT 256
MVREKVTVSTRTLQWKCVESR DSKRLYYGRFIL+PL KGQADTIG+AMRRALLGEIEGT
Sbjct: 1 MVREKVTVSTRTLQWKCVESRADSKRLYYGRFILAPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 257 CITRAKFEKIPHEYSTIVGIQESVHEILMNLKEVVLRSNLYGIRNASICVRGPGYVTAQD 436
CITRAK EKIPHEYSTIVGIQESVHEILMNLKE+VLRSNLYG NASICV+GPGYVTAQD
Sbjct: 61 CITRAKSEKIPHEYSTIVGIQESVHEILMNLKEIVLRSNLYGTCNASICVKGPGYVTAQD 120
Query: 437 IASPPSVEIVDNTQHIASLKEP 502
I PPSVEIVDNTQHIA+L EP
Sbjct: 121 IILPPSVEIVDNTQHIANLTEP 142
>ref|YP_008965524.1| RNA polymerase alpha subunit [Pyrus spinosa]
gi|565666496|emb|CDI73596.1| RNA polymerase alpha
subunit [Pyrus spinosa]
Length = 331
Score = 259 bits (661), Expect = 4e-67
Identities = 128/142 (90%), Positives = 135/142 (95%)
Frame = +2
Query: 77 MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLKKGQADTIGVAMRRALLGEIEGT 256
MVREKVTVSTRTLQWKCVESR DSKRLYYGRFIL+PL KGQADTIG+AMRRALLGEIEGT
Sbjct: 1 MVREKVTVSTRTLQWKCVESRADSKRLYYGRFILAPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 257 CITRAKFEKIPHEYSTIVGIQESVHEILMNLKEVVLRSNLYGIRNASICVRGPGYVTAQD 436
CITRAK EKIPHEYSTIVGIQESVHEILMNLKE+VL+SNLYG RNASICV+GPGYVTAQD
Sbjct: 61 CITRAKSEKIPHEYSTIVGIQESVHEILMNLKEIVLKSNLYGTRNASICVKGPGYVTAQD 120
Query: 437 IASPPSVEIVDNTQHIASLKEP 502
I PPSVEIVDNTQ+IA+L EP
Sbjct: 121 IILPPSVEIVDNTQYIANLTEP 142
>ref|YP_008963511.1| RNA polymerase alpha subunit (chloroplast) [Penthorum chinense]
gi|403226812|gb|AFR25691.1| RNA polymerase alpha subunit
(chloroplast) [Penthorum chinense]
Length = 337
Score = 258 bits (660), Expect = 5e-67
Identities = 130/142 (91%), Positives = 132/142 (92%)
Frame = +2
Query: 77 MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLKKGQADTIGVAMRRALLGEIEGT 256
MVREK+ VSTRTLQWKCVESR DSKRLYYGRFILSPL KGQADTIG+AMRRALLGEIEGT
Sbjct: 1 MVREKIRVSTRTLQWKCVESRADSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 257 CITRAKFEKIPHEYSTIVGIQESVHEILMNLKEVVLRSNLYGIRNASICVRGPGYVTAQD 436
CITRAK EKIPHEYSTIVGIQESVHEILMNLKEVVLRSNLYG NASIC RGPG VTAQD
Sbjct: 61 CITRAKSEKIPHEYSTIVGIQESVHEILMNLKEVVLRSNLYGTHNASICFRGPGSVTAQD 120
Query: 437 IASPPSVEIVDNTQHIASLKEP 502
I SPPSVEIVDNTQHIASL EP
Sbjct: 121 IISPPSVEIVDNTQHIASLTEP 142
>gb|ADM14340.1| RNA polymerase alpha subunit [Punica granatum]
Length = 337
Score = 258 bits (660), Expect = 5e-67
Identities = 129/142 (90%), Positives = 133/142 (93%)
Frame = +2
Query: 77 MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLKKGQADTIGVAMRRALLGEIEGT 256
MVREKV VSTRTLQWKCVESR DSKRLYYGRFILSPL KGQADTIG+AMRRALLGEIEGT
Sbjct: 1 MVREKVRVSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 257 CITRAKFEKIPHEYSTIVGIQESVHEILMNLKEVVLRSNLYGIRNASICVRGPGYVTAQD 436
CITRAKFEKIPHEYSTIVGIQESVHEILMNLKE+VLRSNLYG NASICV+GPG VTAQD
Sbjct: 61 CITRAKFEKIPHEYSTIVGIQESVHEILMNLKEIVLRSNLYGTCNASICVKGPGCVTAQD 120
Query: 437 IASPPSVEIVDNTQHIASLKEP 502
I PPSVEI+DNTQHIASL EP
Sbjct: 121 IILPPSVEIIDNTQHIASLMEP 142
>ref|YP_001687169.1| RNA polymerase alpha subunit [Oenothera argillicola]
gi|169143063|ref|YP_001687483.1| RNA polymerase alpha
subunit [Oenothera parviflora]
gi|159792980|gb|ABW98736.1| RNA polymerase alpha subunit
[Oenothera argillicola] gi|159895589|gb|ABX10153.1| RNA
polymerase alpha subunit [Oenothera parviflora]
Length = 366
Score = 258 bits (660), Expect = 5e-67
Identities = 129/142 (90%), Positives = 133/142 (93%)
Frame = +2
Query: 77 MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLKKGQADTIGVAMRRALLGEIEGT 256
MVREKV VSTRTLQWKCVESR DSKRLYYGRFILSPL KGQADTIG+AMRRALLGEIEGT
Sbjct: 1 MVREKVRVSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 257 CITRAKFEKIPHEYSTIVGIQESVHEILMNLKEVVLRSNLYGIRNASICVRGPGYVTAQD 436
CITRAKFEKIPHEYSTIVGIQESVHEILMNLKE+VLRSNLYG NASICV+GPG VTAQD
Sbjct: 61 CITRAKFEKIPHEYSTIVGIQESVHEILMNLKEIVLRSNLYGTCNASICVKGPGCVTAQD 120
Query: 437 IASPPSVEIVDNTQHIASLKEP 502
I PPSVEI+DNTQHIASL EP
Sbjct: 121 ILLPPSVEIIDNTQHIASLMEP 142
>ref|NP_084725.2| RNA polymerase alpha subunit [Oenothera elata subsp. hookeri]
gi|169142892|ref|YP_001687315.1| RNA polymerase alpha
subunit [Oenothera glazioviana]
gi|169142977|ref|YP_001687399.1| RNA polymerase alpha
subunit [Oenothera biennis]
gi|172045760|sp|Q9MTJ3.2|RPOA_OENEH RecName:
Full=DNA-directed RNA polymerase subunit alpha;
Short=PEP; AltName: Full=Plastid-encoded RNA polymerase
subunit alpha; Short=RNA polymerase subunit alpha
gi|159793150|gb|ABW98904.1| RNA polymerase alpha subunit
[Oenothera biennis] gi|159895504|gb|ABX10069.1| RNA
polymerase alpha subunit [Oenothera glazioviana]
gi|162423699|emb|CAB67191.2| RNA polymerase alpha
subunit [Oenothera elata subsp. hookeri]
Length = 366
Score = 258 bits (660), Expect = 5e-67
Identities = 129/142 (90%), Positives = 133/142 (93%)
Frame = +2
Query: 77 MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLKKGQADTIGVAMRRALLGEIEGT 256
MVREKV VSTRTLQWKCVESR DSKRLYYGRFILSPL KGQADTIG+AMRRALLGEIEGT
Sbjct: 1 MVREKVRVSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 257 CITRAKFEKIPHEYSTIVGIQESVHEILMNLKEVVLRSNLYGIRNASICVRGPGYVTAQD 436
CITRAKFEKIPHEYSTIVGIQESVHEILMNLKE+VLRSNLYG NASICV+GPG VTAQD
Sbjct: 61 CITRAKFEKIPHEYSTIVGIQESVHEILMNLKEIVLRSNLYGTCNASICVKGPGCVTAQD 120
Query: 437 IASPPSVEIVDNTQHIASLKEP 502
I PPSVEI+DNTQHIASL EP
Sbjct: 121 ILLPPSVEIIDNTQHIASLMEP 142
>ref|YP_008081297.1| RNA polymerase alpha subunit (chloroplast) [Catharanthus roseus]
gi|474452108|gb|AGI51176.1| RNA polymerase alpha subunit
(chloroplast) [Catharanthus roseus]
Length = 335
Score = 258 bits (659), Expect = 6e-67
Identities = 127/142 (89%), Positives = 133/142 (93%)
Frame = +2
Query: 77 MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLKKGQADTIGVAMRRALLGEIEGT 256
MVREK+TVSTRTLQWKCVESRTD+KRLYYGRFILSPL KGQADTIG+AMRRALLGEIEGT
Sbjct: 1 MVREKITVSTRTLQWKCVESRTDNKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 257 CITRAKFEKIPHEYSTIVGIQESVHEILMNLKEVVLRSNLYGIRNASICVRGPGYVTAQD 436
CITR KFEK+PHEYSTI GIQESVHEILMNLKE+VLRSNLYG +ASICVRGPGYVTAQD
Sbjct: 61 CITRVKFEKVPHEYSTIKGIQESVHEILMNLKEIVLRSNLYGTCDASICVRGPGYVTAQD 120
Query: 437 IASPPSVEIVDNTQHIASLKEP 502
I PP VEIVDNTQHIASL EP
Sbjct: 121 IVLPPYVEIVDNTQHIASLMEP 142