BLASTX nr result

ID: Paeonia24_contig00036629 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia24_contig00036629
         (290 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002522430.1| pentatricopeptide repeat-containing protein,...    68   1e-09
gb|EXC35441.1| hypothetical protein L484_026747 [Morus notabilis]      59   5e-07
ref|XP_004289123.1| PREDICTED: putative pentatricopeptide repeat...    55   8e-06

>ref|XP_002522430.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223538315|gb|EEF39922.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 556

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 37/75 (49%), Positives = 51/75 (68%), Gaps = 6/75 (8%)
 Frame = +3

Query: 84  MILLVRPHIRRLCTSST---IEYRGLLVSN---DQLAHKANAFTQVDMFEANSELKQLVK 245
           M + VRP+IRRLC +S+    +YR L V+    + L+HK      ++M E NS+LK LVK
Sbjct: 1   MAVAVRPYIRRLCAASSSTCTDYRDLSVAYSVPNNLSHKTQPSNLINMLEINSKLKALVK 60

Query: 246 TGSLRDARQLFDKMP 290
           TG L+DARQ+FD+MP
Sbjct: 61  TGCLQDARQMFDEMP 75


>gb|EXC35441.1| hypothetical protein L484_026747 [Morus notabilis]
          Length = 711

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 35/75 (46%), Positives = 45/75 (60%), Gaps = 6/75 (8%)
 Frame = +3

Query: 84  MILLVRPHIRRLCTS---STIEYRGLLVSN---DQLAHKANAFTQVDMFEANSELKQLVK 245
           + L VRP IRR+ T+   S+ E+   L S    DQ   + +    V+M E NS LK+LVK
Sbjct: 2   VFLSVRPRIRRIFTAQAFSSTEHENFLTSAGGPDQSFEETHVVNHVEMHELNSRLKELVK 61

Query: 246 TGSLRDARQLFDKMP 290
           TG L DAR LFD+MP
Sbjct: 62  TGHLNDARNLFDEMP 76


>ref|XP_004289123.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g47840-like [Fragaria vesca subsp. vesca]
          Length = 696

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 32/76 (42%), Positives = 47/76 (61%), Gaps = 7/76 (9%)
 Frame = +3

Query: 84  MILLVRPHIRRLCTSSTIEY---RGLLVS----NDQLAHKANAFTQVDMFEANSELKQLV 242
           M+  +R   RRL TSS + +   R L+++     +Q  HK +    VD+ E NS+LKQLV
Sbjct: 1   MVRTIRSQFRRLFTSSPLAHPQCRSLVLAPESKTEQRDHKTHHANHVDIPELNSQLKQLV 60

Query: 243 KTGSLRDARQLFDKMP 290
           K G L+ AR++FD+MP
Sbjct: 61  KAGDLKHARKVFDEMP 76


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