BLASTX nr result
ID: Paeonia24_contig00030285
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Paeonia24_contig00030285
(410 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006849925.1| hypothetical protein AMTR_s00022p00114710 [A... 184 4e-56
ref|XP_004300244.1| PREDICTED: U5 small nuclear ribonucleoprotei... 186 2e-55
gb|EYU30521.1| hypothetical protein MIMGU_mgv1a000041mg [Mimulus... 175 2e-53
ref|XP_005764893.1| hypothetical protein EMIHUDRAFT_422149 [Emil... 171 4e-49
ref|XP_003595992.1| U5 small nuclear ribonucleoprotein 200 kDa h... 192 4e-47
ref|XP_002631921.1| Hypothetical protein CBG07909 [Caenorhabditi... 170 7e-47
ref|XP_007149260.1| hypothetical protein PHAVU_005G055300g [Phas... 191 9e-47
ref|XP_004488845.1| PREDICTED: U5 small nuclear ribonucleoprotei... 191 9e-47
ref|XP_002518663.1| U520, putative [Ricinus communis] gi|2235420... 191 9e-47
ref|XP_003099881.1| hypothetical protein CRE_24595 [Caenorhabdit... 170 1e-46
ref|XP_002266580.1| PREDICTED: U5 small nuclear ribonucleoprotei... 189 3e-46
emb|CAN75158.1| hypothetical protein VITISV_042645 [Vitis vinifera] 189 3e-46
gb|EGT49744.1| hypothetical protein CAEBREN_12565 [Caenorhabditi... 169 4e-46
ref|XP_004165711.1| PREDICTED: LOW QUALITY PROTEIN: U5 small nuc... 189 5e-46
ref|XP_004147618.1| PREDICTED: U5 small nuclear ribonucleoprotei... 189 5e-46
ref|XP_003369226.1| putative Sec63 domain protein [Trichinella s... 171 1e-45
ref|XP_006598183.1| PREDICTED: U5 small nuclear ribonucleoprotei... 187 1e-45
ref|XP_003531516.1| PREDICTED: U5 small nuclear ribonucleoprotei... 187 1e-45
ref|XP_001757495.1| predicted protein [Physcomitrella patens] gi... 187 1e-45
ref|XP_002322252.1| U5 small nuclear ribonucleoprotein helicase ... 187 2e-45
>ref|XP_006849925.1| hypothetical protein AMTR_s00022p00114710 [Amborella trichopoda]
gi|548853523|gb|ERN11506.1| hypothetical protein
AMTR_s00022p00114710 [Amborella trichopoda]
Length = 2171
Score = 184 bits (466), Expect(2) = 4e-56
Identities = 89/107 (83%), Positives = 97/107 (90%), Gaps = 1/107 (0%)
Frame = +3
Query: 90 EPFPVESHLHH-LHDKLNAEVVVGVIENKQQAVDYLTWTFMYRRLTQNPNYYNLQGVSNR 266
E FPVESHL H LHD LNAEVVVG+IE+KQ AVDYLTWTFMYRRL+QNPNYYNLQGVS+R
Sbjct: 1746 ESFPVESHLQHFLHDNLNAEVVVGIIESKQDAVDYLTWTFMYRRLSQNPNYYNLQGVSHR 1805
Query: 267 HLSDHLSELVENTLSDLETSKCLSIANDMDISSTNLGMIASYYYISY 407
HLSDHLSELVENTLS+LE SKC++I DMD+S NLGMIASYYYISY
Sbjct: 1806 HLSDHLSELVENTLSNLEASKCVAIEEDMDLSPLNLGMIASYYYISY 1852
Score = 60.1 bits (144), Expect(2) = 4e-56
Identities = 26/33 (78%), Positives = 28/33 (84%)
Frame = +2
Query: 2 ANRPLIDNSGKCVILCHAPRKEYYKKFFERTIP 100
A+RPL DNSGKCVILCHAPRKEYYKKF + P
Sbjct: 1717 ASRPLQDNSGKCVILCHAPRKEYYKKFVYESFP 1749
Score = 67.4 bits (163), Expect = 2e-09
Identities = 39/115 (33%), Positives = 67/115 (58%), Gaps = 5/115 (4%)
Frame = +3
Query: 78 SSLNEPFPVESH-LHHLHDKLNAEVVVGVIENKQQAVDYLTWTFMYRRLTQNPNYYNLQG 254
S +NE P+ES + L D+LNAE+V+G ++N ++A +L +T++Y R+ +NP Y L
Sbjct: 904 SLMNEQLPIESQFVSKLADQLNAEIVLGTVQNAREACTWLGYTYLYIRMLRNPVLYGLTT 963
Query: 255 ---VSNRHLSDHLSELVENTLSDLETSKCLSIANDMD-ISSTNLGMIASYYYISY 407
++ L + ++LV + + L+ + + T+LG IASYYYIS+
Sbjct: 964 DAIEKDKTLEERRADLVHSAATILDKNNLVKYDRKSGYFQVTDLGRIASYYYISH 1018
>ref|XP_004300244.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
[Fragaria vesca subsp. vesca]
Length = 2173
Score = 186 bits (471), Expect(2) = 2e-55
Identities = 89/109 (81%), Positives = 99/109 (90%), Gaps = 1/109 (0%)
Frame = +3
Query: 84 LNEPFPVESHLHH-LHDKLNAEVVVGVIENKQQAVDYLTWTFMYRRLTQNPNYYNLQGVS 260
L E FPVESHLHH LHD LNAEVV G+IENKQ AVDYLTWTF+YRRLTQNPNYYNLQGV+
Sbjct: 1755 LYEAFPVESHLHHYLHDNLNAEVVAGIIENKQDAVDYLTWTFLYRRLTQNPNYYNLQGVT 1814
Query: 261 NRHLSDHLSELVENTLSDLETSKCLSIANDMDISSTNLGMIASYYYISY 407
RHLSD+LSELVENTLSDLETSKC++I ++ D+S+ NLGMIASYYYISY
Sbjct: 1815 QRHLSDYLSELVENTLSDLETSKCVAIEDETDLSALNLGMIASYYYISY 1863
Score = 55.8 bits (133), Expect(2) = 2e-55
Identities = 23/33 (69%), Positives = 25/33 (75%)
Frame = +2
Query: 2 ANRPLIDNSGKCVILCHAPRKEYYKKFFERTIP 100
A+RP +DNSGKCVI CHAPRKEYY KF P
Sbjct: 1728 ASRPKLDNSGKCVIFCHAPRKEYYMKFLYEAFP 1760
Score = 65.1 bits (157), Expect = 1e-08
Identities = 37/115 (32%), Positives = 68/115 (59%), Gaps = 5/115 (4%)
Frame = +3
Query: 78 SSLNEPFPVESH-LHHLHDKLNAEVVVGVIENKQQAVDYLTWTFMYRRLTQNPNYYNLQG 254
S +N+ P+ES + L D+LNAE+V+G ++N ++A +L +T+++ R+ +NP Y L+
Sbjct: 915 SLMNQQLPIESQFVSKLADQLNAEIVLGTVQNAREACHWLGYTYLFVRMLRNPTLYRLEA 974
Query: 255 -VSNRH--LSDHLSELVENTLSDLETSKCLSIANDMD-ISSTNLGMIASYYYISY 407
V R L + ++L+ + + L+ + + T+LG IASYYYI++
Sbjct: 975 DVLTRDVLLDERRADLIHSAATILDKNNLIKYDRKSGYFQVTDLGRIASYYYITH 1029
>gb|EYU30521.1| hypothetical protein MIMGU_mgv1a000041mg [Mimulus guttatus]
Length = 2168
Score = 175 bits (444), Expect(2) = 2e-53
Identities = 84/109 (77%), Positives = 95/109 (87%), Gaps = 1/109 (0%)
Frame = +3
Query: 84 LNEPFPVESHLHH-LHDKLNAEVVVGVIENKQQAVDYLTWTFMYRRLTQNPNYYNLQGVS 260
L E FPVESHLHH +HD +NAEVV GVI+N Q AVDYLTWTFMYRRLTQNPNYYNLQGVS
Sbjct: 1745 LFEAFPVESHLHHYMHDNINAEVVAGVIQNTQDAVDYLTWTFMYRRLTQNPNYYNLQGVS 1804
Query: 261 NRHLSDHLSELVENTLSDLETSKCLSIANDMDISSTNLGMIASYYYISY 407
+RHLSDHLSELVE+TLSDLE SKC+++ D+ +S NLG+I SYYYISY
Sbjct: 1805 HRHLSDHLSELVESTLSDLEASKCVAVEEDVLLSPLNLGLIFSYYYISY 1853
Score = 59.7 bits (143), Expect(2) = 2e-53
Identities = 26/33 (78%), Positives = 27/33 (81%)
Frame = +2
Query: 2 ANRPLIDNSGKCVILCHAPRKEYYKKFFERTIP 100
A+RPLIDNSGKCVILCHAPRK YYKKF P
Sbjct: 1718 ASRPLIDNSGKCVILCHAPRKVYYKKFLFEAFP 1750
Score = 68.6 bits (166), Expect = 9e-10
Identities = 36/115 (31%), Positives = 70/115 (60%), Gaps = 5/115 (4%)
Frame = +3
Query: 78 SSLNEPFPVESH-LHHLHDKLNAEVVVGVIENKQQAVDYLTWTFMYRRLTQNPNYYNLQG 254
S +N+ P+ES + L D+LNAE+V+G ++N ++A +L +T+++ R+ +NP Y L
Sbjct: 905 SLMNQQLPIESKFISRLADQLNAEIVLGTVQNAKEACKWLLYTYLFVRMMRNPTLYGLAA 964
Query: 255 VS---NRHLSDHLSELVENTLSDLETSKCLSIANDMD-ISSTNLGMIASYYYISY 407
+ ++ L + ++L+ + + L+ S ++ +T+LG IASYYYI++
Sbjct: 965 DALKRDKTLEERRADLIHSAATVLDKSNLVTYDRKSGYFQATDLGRIASYYYITH 1019
>ref|XP_005764893.1| hypothetical protein EMIHUDRAFT_422149 [Emiliania huxleyi CCMP1516]
gi|485614682|gb|EOD12464.1| hypothetical protein
EMIHUDRAFT_422149 [Emiliania huxleyi CCMP1516]
Length = 2155
Score = 171 bits (434), Expect(2) = 4e-49
Identities = 84/112 (75%), Positives = 93/112 (83%), Gaps = 1/112 (0%)
Frame = +3
Query: 75 RSSLNEPFPVESHLHH-LHDKLNAEVVVGVIENKQQAVDYLTWTFMYRRLTQNPNYYNLQ 251
R L EPFPVESHL H LHD L AEVV IENKQ AVDYLTWTFMYRRLTQNPNYYNLQ
Sbjct: 1719 RKFLYEPFPVESHLDHFLHDHLCAEVVTKTIENKQDAVDYLTWTFMYRRLTQNPNYYNLQ 1778
Query: 252 GVSNRHLSDHLSELVENTLSDLETSKCLSIANDMDISSTNLGMIASYYYISY 407
G S+RHLSDHLSELVE TL+DLE ++C++I + M++S NLGMIASYYYI Y
Sbjct: 1779 GASHRHLSDHLSELVETTLTDLEQARCVAIEDGMEVSPLNLGMIASYYYIQY 1830
Score = 49.3 bits (116), Expect(2) = 4e-49
Identities = 19/33 (57%), Positives = 25/33 (75%)
Frame = +2
Query: 2 ANRPLIDNSGKCVILCHAPRKEYYKKFFERTIP 100
A RPL+D SG+CV+LCHAP+K +Y+KF P
Sbjct: 1695 ACRPLVDESGRCVLLCHAPKKLFYRKFLYEPFP 1727
>ref|XP_003595992.1| U5 small nuclear ribonucleoprotein 200 kDa helicase [Medicago
truncatula] gi|355485040|gb|AES66243.1| U5 small nuclear
ribonucleoprotein 200 kDa helicase [Medicago truncatula]
Length = 2223
Score = 192 bits (488), Expect = 4e-47
Identities = 93/116 (80%), Positives = 101/116 (87%), Gaps = 1/116 (0%)
Frame = +3
Query: 63 KNTTRSSLNEPFPVESHLHH-LHDKLNAEVVVGVIENKQQAVDYLTWTFMYRRLTQNPNY 239
K + L E FPVESHLHH LHD LNAE+V G+IENKQ AVDYLTWTFMYRRLTQNPNY
Sbjct: 1794 KEYYKKFLYEAFPVESHLHHFLHDNLNAEIVAGIIENKQDAVDYLTWTFMYRRLTQNPNY 1853
Query: 240 YNLQGVSNRHLSDHLSELVENTLSDLETSKCLSIANDMDISSTNLGMIASYYYISY 407
YNLQGVS+RHLSDHLSE+VENTLSDLE SKC+SI +DMD+S NLGMIASYYYISY
Sbjct: 1854 YNLQGVSHRHLSDHLSEMVENTLSDLEASKCVSIEDDMDLSPLNLGMIASYYYISY 1909
Score = 62.4 bits (150), Expect = 6e-08
Identities = 26/33 (78%), Positives = 28/33 (84%)
Frame = +2
Query: 2 ANRPLIDNSGKCVILCHAPRKEYYKKFFERTIP 100
A+RPL+DNSGKCVILCHAPRKEYYKKF P
Sbjct: 1774 ASRPLVDNSGKCVILCHAPRKEYYKKFLYEAFP 1806
Score = 60.8 bits (146), Expect = 2e-07
Identities = 43/130 (33%), Positives = 73/130 (56%), Gaps = 20/130 (15%)
Frame = +3
Query: 78 SSLNEPFPVESH-LHHLHDKLNAEVVVGVIENKQQAVDYLTWTFMYRRLTQNPNYYNL-Q 251
S +N+ P+ES + L D+LNAE+V+G ++N ++A ++ +T++Y R+ +NP+ Y L
Sbjct: 925 SLMNQQLPIESQFISKLADQLNAEIVLGTVQNAKEACHWIGYTYLYVRMLRNPSLYGLAP 984
Query: 252 GVSNRHL------SDHLSELVENTLSDL----ETSKCLSIANDM---DISS-----TNLG 377
V +R + +D EL+E L T+ + N++ D S T+LG
Sbjct: 985 DVLSRDITLEERRADLFIELLEKGTKSLWTIIHTAATILDRNNLVKYDRKSGYFQVTDLG 1044
Query: 378 MIASYYYISY 407
IASYYYI++
Sbjct: 1045 RIASYYYITH 1054
>ref|XP_002631921.1| Hypothetical protein CBG07909 [Caenorhabditis briggsae]
gi|187033140|emb|CAP27837.1| Protein CBG07909
[Caenorhabditis briggsae]
Length = 2145
Score = 170 bits (431), Expect(2) = 7e-47
Identities = 81/113 (71%), Positives = 92/113 (81%), Gaps = 1/113 (0%)
Frame = +3
Query: 75 RSSLNEPFPVESHLHH-LHDKLNAEVVVGVIENKQQAVDYLTWTFMYRRLTQNPNYYNLQ 251
R L +P PVESHL H LHD NAE+V IENKQ A+DYLTWT +YRR+TQNPNYYNLQ
Sbjct: 1714 RKFLGDPLPVESHLDHCLHDHFNAEIVTKTIENKQDAIDYLTWTLLYRRMTQNPNYYNLQ 1773
Query: 252 GVSNRHLSDHLSELVENTLSDLETSKCLSIANDMDISSTNLGMIASYYYISYE 410
G ++RHLSD LSELVENTL DLE SKC++I +DMD S NLGMIASYYYISY+
Sbjct: 1774 GTTHRHLSDALSELVENTLKDLENSKCIAIKDDMDTVSLNLGMIASYYYISYQ 1826
Score = 42.7 bits (99), Expect(2) = 7e-47
Identities = 14/33 (42%), Positives = 24/33 (72%)
Frame = +2
Query: 2 ANRPLIDNSGKCVILCHAPRKEYYKKFFERTIP 100
ANRP++D+ KCV++C + ++ YY+KF +P
Sbjct: 1690 ANRPILDSEAKCVVMCQSSKRAYYRKFLGDPLP 1722
Score = 63.2 bits (152), Expect(2) = 5e-09
Identities = 39/121 (32%), Positives = 63/121 (52%), Gaps = 10/121 (8%)
Frame = +3
Query: 78 SSLNEPFPVESHL-HHLHDKLNAEVVVGVIENKQQAVDYLTWTFMYRRLTQNPNYYNLQG 254
S +N+ PVES + L D LNAEVV+G + + +A ++L +TF++ R+ +NP Y +
Sbjct: 874 SLMNQQLPVESQMVSRLTDMLNAEVVLGTVSSVSEATNWLGYTFLFVRMLKNPTLYGI-- 931
Query: 255 VSNRHLSDHLSELVENTLSDLETSKCLSI---------ANDMDISSTNLGMIASYYYISY 407
H L+E +DL + C+ + I +T LG IAS++Y +Y
Sbjct: 932 ---THEQARADPLLEQRRADLIHTACVLLDKAGLIKYDKRSGIIQATELGRIASHFYCTY 988
Query: 408 E 410
E
Sbjct: 989 E 989
Score = 22.7 bits (47), Expect(2) = 5e-09
Identities = 8/33 (24%), Positives = 16/33 (48%)
Frame = +2
Query: 2 ANRPLIDNSGKCVILCHAPRKEYYKKFFERTIP 100
A RP D G+ +++ + +YY + +P
Sbjct: 849 AGRPQYDERGEGILITNHSELQYYLSLMNQQLP 881
>ref|XP_007149260.1| hypothetical protein PHAVU_005G055300g [Phaseolus vulgaris]
gi|593697576|ref|XP_007149261.1| hypothetical protein
PHAVU_005G055300g [Phaseolus vulgaris]
gi|561022524|gb|ESW21254.1| hypothetical protein
PHAVU_005G055300g [Phaseolus vulgaris]
gi|561022525|gb|ESW21255.1| hypothetical protein
PHAVU_005G055300g [Phaseolus vulgaris]
Length = 2184
Score = 191 bits (485), Expect = 9e-47
Identities = 92/116 (79%), Positives = 100/116 (86%), Gaps = 1/116 (0%)
Frame = +3
Query: 63 KNTTRSSLNEPFPVESHLHH-LHDKLNAEVVVGVIENKQQAVDYLTWTFMYRRLTQNPNY 239
K + L E FPVESHLHH LHD LNAE+V G+IENKQ AVDYLTWTFMYRRLTQNPNY
Sbjct: 1749 KEYYKKFLYEAFPVESHLHHFLHDNLNAEIVAGIIENKQDAVDYLTWTFMYRRLTQNPNY 1808
Query: 240 YNLQGVSNRHLSDHLSELVENTLSDLETSKCLSIANDMDISSTNLGMIASYYYISY 407
YNLQGVS+RHLSDHLSE+VENTLSDLE SKC++I DMD+S NLGMIASYYYISY
Sbjct: 1809 YNLQGVSHRHLSDHLSEMVENTLSDLEASKCITIEEDMDLSPLNLGMIASYYYISY 1864
Score = 65.1 bits (157), Expect = 1e-08
Identities = 37/115 (32%), Positives = 68/115 (59%), Gaps = 5/115 (4%)
Frame = +3
Query: 78 SSLNEPFPVESH-LHHLHDKLNAEVVVGVIENKQQAVDYLTWTFMYRRLTQNPNYYNL-Q 251
S +N+ P+ES + L D+LNAE+V+G ++N ++A +++ +T++Y R+ +NP+ Y +
Sbjct: 917 SLMNQQLPIESQFVSKLADQLNAEIVLGTVQNAREACNWIGYTYLYVRMLRNPSLYGIAP 976
Query: 252 GVSNRH--LSDHLSELVENTLSDLETSKCLSIANDMD-ISSTNLGMIASYYYISY 407
V R L + ++L+ S L+ + + T+LG IASYYYI++
Sbjct: 977 DVLTRDITLEERRADLIHTAASILDRNNLVKYDRKSGYFQVTDLGRIASYYYITH 1031
Score = 62.4 bits (150), Expect = 6e-08
Identities = 26/33 (78%), Positives = 28/33 (84%)
Frame = +2
Query: 2 ANRPLIDNSGKCVILCHAPRKEYYKKFFERTIP 100
A+RPL+DNSGKCVILCHAPRKEYYKKF P
Sbjct: 1729 ASRPLVDNSGKCVILCHAPRKEYYKKFLYEAFP 1761
>ref|XP_004488845.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
isoform X1 [Cicer arietinum]
gi|502089221|ref|XP_004488846.1| PREDICTED: U5 small
nuclear ribonucleoprotein 200 kDa helicase-like isoform
X2 [Cicer arietinum]
Length = 2187
Score = 191 bits (485), Expect = 9e-47
Identities = 92/116 (79%), Positives = 101/116 (87%), Gaps = 1/116 (0%)
Frame = +3
Query: 63 KNTTRSSLNEPFPVESHLHH-LHDKLNAEVVVGVIENKQQAVDYLTWTFMYRRLTQNPNY 239
K + L E FPVESHLHH LHD LNAE+V G+IENKQ AVDYLTWTFMYRRLTQNPNY
Sbjct: 1753 KEYYKKFLYEAFPVESHLHHFLHDNLNAEIVAGIIENKQDAVDYLTWTFMYRRLTQNPNY 1812
Query: 240 YNLQGVSNRHLSDHLSELVENTLSDLETSKCLSIANDMDISSTNLGMIASYYYISY 407
YNLQGVS+RHLSDHLSE+VENTLSDLE SKC++I +DMD+S NLGMIASYYYISY
Sbjct: 1813 YNLQGVSHRHLSDHLSEMVENTLSDLEASKCVAIEDDMDLSPLNLGMIASYYYISY 1868
Score = 63.5 bits (153), Expect = 3e-08
Identities = 34/115 (29%), Positives = 66/115 (57%), Gaps = 5/115 (4%)
Frame = +3
Query: 78 SSLNEPFPVESH-LHHLHDKLNAEVVVGVIENKQQAVDYLTWTFMYRRLTQNPNYYNLQG 254
S +N+ P+ES + L D+LNAE+V+G ++N ++A ++ +T++Y R+ +NP+ Y +
Sbjct: 921 SLMNQQLPIESQFISKLADQLNAEIVLGTVQNAKEACHWIGYTYLYVRMLRNPSLYGIAP 980
Query: 255 ---VSNRHLSDHLSELVENTLSDLETSKCLSIANDMD-ISSTNLGMIASYYYISY 407
+ L + ++L+ + L+ + + T+LG IASYYYI++
Sbjct: 981 DVLTKDITLEERRADLIHTAATILDRNNLVKYDRKSGYFQVTDLGRIASYYYITH 1035
Score = 62.4 bits (150), Expect = 6e-08
Identities = 26/33 (78%), Positives = 28/33 (84%)
Frame = +2
Query: 2 ANRPLIDNSGKCVILCHAPRKEYYKKFFERTIP 100
A+RPL+DNSGKCVILCHAPRKEYYKKF P
Sbjct: 1733 ASRPLVDNSGKCVILCHAPRKEYYKKFLYEAFP 1765
>ref|XP_002518663.1| U520, putative [Ricinus communis] gi|223542044|gb|EEF43588.1| U520,
putative [Ricinus communis]
Length = 1809
Score = 191 bits (485), Expect = 9e-47
Identities = 97/132 (73%), Positives = 106/132 (80%), Gaps = 4/132 (3%)
Frame = +3
Query: 24 ILENASFSAMLLE---KNTTRSSLNEPFPVESHLHH-LHDKLNAEVVVGVIENKQQAVDY 191
+L+N+ +L K + L E FPVESHLHH LHD NAEVV GVIENKQ AVDY
Sbjct: 1362 LLDNSGKCVILCHAPRKEYYKKFLYEAFPVESHLHHFLHDNFNAEVVAGVIENKQDAVDY 1421
Query: 192 LTWTFMYRRLTQNPNYYNLQGVSNRHLSDHLSELVENTLSDLETSKCLSIANDMDISSTN 371
LTWTFMYRRLTQNPNYYNLQGVS+RHLSDHLSELVENTLSDLE SKC++I DMD+S N
Sbjct: 1422 LTWTFMYRRLTQNPNYYNLQGVSHRHLSDHLSELVENTLSDLEASKCVAIEEDMDLSPLN 1481
Query: 372 LGMIASYYYISY 407
LGMIASYYYISY
Sbjct: 1482 LGMIASYYYISY 1493
Score = 65.9 bits (159), Expect = 6e-09
Identities = 38/115 (33%), Positives = 69/115 (60%), Gaps = 5/115 (4%)
Frame = +3
Query: 78 SSLNEPFPVESH-LHHLHDKLNAEVVVGVIENKQQAVDYLTWTFMYRRLTQNPNYYNL-Q 251
S +N+ P+ES + L D+LNAE+V+G ++N ++A ++L +T++Y R+ +NP Y L
Sbjct: 545 SLMNQQLPIESQFVSKLADQLNAEIVLGTVQNAREACNWLGYTYLYIRMLRNPTLYGLAP 604
Query: 252 GVSNRH--LSDHLSELVENTLSDLETSKCLSIANDMD-ISSTNLGMIASYYYISY 407
V R L + ++L+ ++ + L+ + + T+LG IASYYYI++
Sbjct: 605 DVLTRDITLEERRADLIHSSATILDKNNLVKYDRKSGYFQVTDLGRIASYYYITH 659
Score = 62.0 bits (149), Expect = 8e-08
Identities = 26/33 (78%), Positives = 28/33 (84%)
Frame = +2
Query: 2 ANRPLIDNSGKCVILCHAPRKEYYKKFFERTIP 100
A+RPL+DNSGKCVILCHAPRKEYYKKF P
Sbjct: 1358 ASRPLLDNSGKCVILCHAPRKEYYKKFLYEAFP 1390
>ref|XP_003099881.1| hypothetical protein CRE_24595 [Caenorhabditis remanei]
gi|308266148|gb|EFP10101.1| hypothetical protein
CRE_24595 [Caenorhabditis remanei]
Length = 2148
Score = 170 bits (431), Expect(2) = 1e-46
Identities = 82/113 (72%), Positives = 92/113 (81%), Gaps = 1/113 (0%)
Frame = +3
Query: 75 RSSLNEPFPVESHLHH-LHDKLNAEVVVGVIENKQQAVDYLTWTFMYRRLTQNPNYYNLQ 251
R L +P PVESHL H LHD NAE+V IENKQ A+DYLTWT +YRR+TQNPNYYNLQ
Sbjct: 1717 RKFLCDPLPVESHLDHCLHDHFNAEIVTKTIENKQDAIDYLTWTLLYRRMTQNPNYYNLQ 1776
Query: 252 GVSNRHLSDHLSELVENTLSDLETSKCLSIANDMDISSTNLGMIASYYYISYE 410
G S+RHLSD LSELVENTL DLE SKC++I +DMD S NLGMIASYYYISY+
Sbjct: 1777 GTSHRHLSDALSELVENTLKDLENSKCIAIKDDMDTVSLNLGMIASYYYISYQ 1829
Score = 42.0 bits (97), Expect(2) = 1e-46
Identities = 14/33 (42%), Positives = 24/33 (72%)
Frame = +2
Query: 2 ANRPLIDNSGKCVILCHAPRKEYYKKFFERTIP 100
ANRP++D+ KCV++C + ++ YY+KF +P
Sbjct: 1693 ANRPILDSEAKCVVMCQSSKRAYYRKFLCDPLP 1725
Score = 62.8 bits (151), Expect(2) = 7e-09
Identities = 39/121 (32%), Positives = 63/121 (52%), Gaps = 10/121 (8%)
Frame = +3
Query: 78 SSLNEPFPVESHL-HHLHDKLNAEVVVGVIENKQQAVDYLTWTFMYRRLTQNPNYYNLQG 254
S +N+ PVES + L D LNAEVV+G + + +A ++L +TF++ R+ +NP Y +
Sbjct: 874 SLMNQQLPVESQMVSRLTDMLNAEVVLGTVSSVSEATNWLGYTFLFVRMLKNPTLYGI-- 931
Query: 255 VSNRHLSDHLSELVENTLSDLETSKCLSI---------ANDMDISSTNLGMIASYYYISY 407
H L+E +DL + C+ + I +T LG IAS++Y +Y
Sbjct: 932 ---THEQMRADPLLEQRRADLIHTACVLLDKAGLIKYDKRSGIIQATELGRIASHFYCTY 988
Query: 408 E 410
E
Sbjct: 989 E 989
Score = 22.7 bits (47), Expect(2) = 7e-09
Identities = 8/33 (24%), Positives = 16/33 (48%)
Frame = +2
Query: 2 ANRPLIDNSGKCVILCHAPRKEYYKKFFERTIP 100
A RP D G+ +++ + +YY + +P
Sbjct: 849 AGRPQYDERGEGILITNHSELQYYLSLMNQQLP 881
>ref|XP_002266580.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase [Vitis
vinifera]
Length = 2177
Score = 189 bits (481), Expect = 3e-46
Identities = 96/132 (72%), Positives = 108/132 (81%), Gaps = 4/132 (3%)
Frame = +3
Query: 24 ILENASFSAMLLE---KNTTRSSLNEPFPVESHL-HHLHDKLNAEVVVGVIENKQQAVDY 191
+L+N+ +L K + L E FPVESHL H+LHD LNAE+VVGVIENKQ AVDY
Sbjct: 1729 LLDNSGKCVILCHAPRKEYYKKFLYEAFPVESHLQHYLHDNLNAEIVVGVIENKQDAVDY 1788
Query: 192 LTWTFMYRRLTQNPNYYNLQGVSNRHLSDHLSELVENTLSDLETSKCLSIANDMDISSTN 371
LTWTFMYRRLTQNPNYYNLQGVS+RHLSDHLSE VENTLSDLE SKC++I +DMD+S N
Sbjct: 1789 LTWTFMYRRLTQNPNYYNLQGVSHRHLSDHLSESVENTLSDLEASKCVAIEDDMDLSPLN 1848
Query: 372 LGMIASYYYISY 407
LGMIASYYYISY
Sbjct: 1849 LGMIASYYYISY 1860
Score = 63.2 bits (152), Expect = 4e-08
Identities = 35/115 (30%), Positives = 65/115 (56%), Gaps = 5/115 (4%)
Frame = +3
Query: 78 SSLNEPFPVESH-LHHLHDKLNAEVVVGVIENKQQAVDYLTWTFMYRRLTQNPNYYNLQG 254
S +N+ P+ES + L D+LNAE+V+G ++N ++A ++ +T++Y R+ +NP Y L
Sbjct: 912 SLMNQQLPIESQFVSKLADQLNAEIVLGTVQNAREACSWIGYTYLYVRMLRNPTLYGLSH 971
Query: 255 ---VSNRHLSDHLSELVENTLSDLETSKCLSIANDMD-ISSTNLGMIASYYYISY 407
+ L + ++L+ + L+ + + T+LG IASYYYI++
Sbjct: 972 DALTRDITLEERRADLIHSAAIILDRNNLVKYDRKSGYFQVTDLGRIASYYYITH 1026
Score = 62.0 bits (149), Expect = 8e-08
Identities = 26/33 (78%), Positives = 28/33 (84%)
Frame = +2
Query: 2 ANRPLIDNSGKCVILCHAPRKEYYKKFFERTIP 100
A+RPL+DNSGKCVILCHAPRKEYYKKF P
Sbjct: 1725 ASRPLLDNSGKCVILCHAPRKEYYKKFLYEAFP 1757
>emb|CAN75158.1| hypothetical protein VITISV_042645 [Vitis vinifera]
Length = 2144
Score = 189 bits (481), Expect = 3e-46
Identities = 96/132 (72%), Positives = 108/132 (81%), Gaps = 4/132 (3%)
Frame = +3
Query: 24 ILENASFSAMLLE---KNTTRSSLNEPFPVESHL-HHLHDKLNAEVVVGVIENKQQAVDY 191
+L+N+ +L K + L E FPVESHL H+LHD LNAE+VVGVIENKQ AVDY
Sbjct: 1696 LLDNSGKCVILCHAPRKEYYKKFLYEAFPVESHLQHYLHDNLNAEIVVGVIENKQDAVDY 1755
Query: 192 LTWTFMYRRLTQNPNYYNLQGVSNRHLSDHLSELVENTLSDLETSKCLSIANDMDISSTN 371
LTWTFMYRRLTQNPNYYNLQGVS+RHLSDHLSE VENTLSDLE SKC++I +DMD+S N
Sbjct: 1756 LTWTFMYRRLTQNPNYYNLQGVSHRHLSDHLSESVENTLSDLEASKCVAIEDDMDLSPLN 1815
Query: 372 LGMIASYYYISY 407
LGMIASYYYISY
Sbjct: 1816 LGMIASYYYISY 1827
Score = 63.2 bits (152), Expect = 4e-08
Identities = 35/115 (30%), Positives = 65/115 (56%), Gaps = 5/115 (4%)
Frame = +3
Query: 78 SSLNEPFPVESH-LHHLHDKLNAEVVVGVIENKQQAVDYLTWTFMYRRLTQNPNYYNLQG 254
S +N+ P+ES + L D+LNAE+V+G ++N ++A ++ +T++Y R+ +NP Y L
Sbjct: 879 SLMNQQLPIESQFVSKLADQLNAEIVLGTVQNAREACSWIGYTYLYVRMLRNPTLYGLSH 938
Query: 255 ---VSNRHLSDHLSELVENTLSDLETSKCLSIANDMD-ISSTNLGMIASYYYISY 407
+ L + ++L+ + L+ + + T+LG IASYYYI++
Sbjct: 939 DALTRDITLEERRADLIHSAAIILDRNNLVKYDRKSGYFQVTDLGRIASYYYITH 993
Score = 62.0 bits (149), Expect = 8e-08
Identities = 26/33 (78%), Positives = 28/33 (84%)
Frame = +2
Query: 2 ANRPLIDNSGKCVILCHAPRKEYYKKFFERTIP 100
A+RPL+DNSGKCVILCHAPRKEYYKKF P
Sbjct: 1692 ASRPLLDNSGKCVILCHAPRKEYYKKFLYEAFP 1724
>gb|EGT49744.1| hypothetical protein CAEBREN_12565 [Caenorhabditis brenneri]
Length = 2144
Score = 169 bits (428), Expect(2) = 4e-46
Identities = 81/113 (71%), Positives = 92/113 (81%), Gaps = 1/113 (0%)
Frame = +3
Query: 75 RSSLNEPFPVESHLHH-LHDKLNAEVVVGVIENKQQAVDYLTWTFMYRRLTQNPNYYNLQ 251
R L +P PVESHL H LHD NAE+V IENKQ A+DYLTWT +YRR+TQNPNYYNLQ
Sbjct: 1714 RKFLCDPLPVESHLDHCLHDHFNAEIVTKTIENKQDAIDYLTWTLLYRRMTQNPNYYNLQ 1773
Query: 252 GVSNRHLSDHLSELVENTLSDLETSKCLSIANDMDISSTNLGMIASYYYISYE 410
G ++RHLSD LSELVENTL DLE SKC++I +DMD S NLGMIASYYYISY+
Sbjct: 1774 GTTHRHLSDALSELVENTLKDLENSKCIAIKDDMDTVSLNLGMIASYYYISYQ 1826
Score = 41.6 bits (96), Expect(2) = 4e-46
Identities = 14/33 (42%), Positives = 23/33 (69%)
Frame = +2
Query: 2 ANRPLIDNSGKCVILCHAPRKEYYKKFFERTIP 100
ANRP++D+ KCV++C ++ YY+KF +P
Sbjct: 1690 ANRPILDSEAKCVVMCQTSKRAYYRKFLCDPLP 1722
Score = 62.8 bits (151), Expect(2) = 7e-09
Identities = 38/121 (31%), Positives = 63/121 (52%), Gaps = 10/121 (8%)
Frame = +3
Query: 78 SSLNEPFPVESHL-HHLHDKLNAEVVVGVIENKQQAVDYLTWTFMYRRLTQNPNYYNLQG 254
S +N+ PVES + L D LNAE+V+G + + +A ++L +TF++ R+ +NP Y +
Sbjct: 874 SLMNQQLPVESQMISRLTDMLNAEIVLGTVSSVSEATNWLGYTFLFVRMLKNPTLYGI-- 931
Query: 255 VSNRHLSDHLSELVENTLSDLETSKCLSI---------ANDMDISSTNLGMIASYYYISY 407
H L+E +DL + C+ + I +T LG IAS++Y +Y
Sbjct: 932 ---THEQARADPLLEQRRADLIHTACVLLDKAGLIKYDKRSGIIQATELGRIASHFYCTY 988
Query: 408 E 410
E
Sbjct: 989 E 989
Score = 22.7 bits (47), Expect(2) = 7e-09
Identities = 8/33 (24%), Positives = 16/33 (48%)
Frame = +2
Query: 2 ANRPLIDNSGKCVILCHAPRKEYYKKFFERTIP 100
A RP D G+ +++ + +YY + +P
Sbjct: 849 AGRPQYDEHGEGILITNHSELQYYLSLMNQQLP 881
>ref|XP_004165711.1| PREDICTED: LOW QUALITY PROTEIN: U5 small nuclear ribonucleoprotein
200 kDa helicase-like [Cucumis sativus]
Length = 2175
Score = 189 bits (479), Expect = 5e-46
Identities = 93/132 (70%), Positives = 108/132 (81%), Gaps = 4/132 (3%)
Frame = +3
Query: 24 ILENASFSAMLLE---KNTTRSSLNEPFPVESHLHH-LHDKLNAEVVVGVIENKQQAVDY 191
+L+N+ +L K + L E FPVESHLHH LHD +NAE+V G+IENKQ AVDY
Sbjct: 1727 LLDNSGKCVILCHAPRKEYYKKFLYEAFPVESHLHHFLHDNINAEIVAGIIENKQDAVDY 1786
Query: 192 LTWTFMYRRLTQNPNYYNLQGVSNRHLSDHLSELVENTLSDLETSKCLSIANDMDISSTN 371
+TWT MYRRLTQNPNYYNLQGVS+RHLSDHLSELVE+TLSDLE SKC+SI +DMD+S +N
Sbjct: 1787 ITWTLMYRRLTQNPNYYNLQGVSHRHLSDHLSELVEHTLSDLEASKCISIEDDMDLSPSN 1846
Query: 372 LGMIASYYYISY 407
LGMIASYYYISY
Sbjct: 1847 LGMIASYYYISY 1858
Score = 65.5 bits (158), Expect = 8e-09
Identities = 36/115 (31%), Positives = 67/115 (58%), Gaps = 5/115 (4%)
Frame = +3
Query: 78 SSLNEPFPVESH-LHHLHDKLNAEVVVGVIENKQQAVDYLTWTFMYRRLTQNPNYYNLQG 254
S +N+ P+ES + L D+LNAE+V+G ++N ++A ++L +T++Y R+ +NP Y L
Sbjct: 910 SLMNQQLPIESQFVSKLADQLNAEIVLGTVQNAREASNWLGYTYLYVRMLRNPTLYGLAA 969
Query: 255 ---VSNRHLSDHLSELVENTLSDLETSKCLSIANDMD-ISSTNLGMIASYYYISY 407
+ L + ++L+ + + L+ + + T+LG IASYYYI++
Sbjct: 970 DAPTRDITLEERRADLIHSAATILDKNNLVKYDRKSGYFQVTDLGRIASYYYITH 1024
Score = 62.0 bits (149), Expect = 8e-08
Identities = 26/33 (78%), Positives = 28/33 (84%)
Frame = +2
Query: 2 ANRPLIDNSGKCVILCHAPRKEYYKKFFERTIP 100
A+RPL+DNSGKCVILCHAPRKEYYKKF P
Sbjct: 1723 ASRPLLDNSGKCVILCHAPRKEYYKKFLYEAFP 1755
>ref|XP_004147618.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
[Cucumis sativus]
Length = 2175
Score = 189 bits (479), Expect = 5e-46
Identities = 93/132 (70%), Positives = 108/132 (81%), Gaps = 4/132 (3%)
Frame = +3
Query: 24 ILENASFSAMLLE---KNTTRSSLNEPFPVESHLHH-LHDKLNAEVVVGVIENKQQAVDY 191
+L+N+ +L K + L E FPVESHLHH LHD +NAE+V G+IENKQ AVDY
Sbjct: 1727 LLDNSGKCVILCHAPRKEYYKKFLYEAFPVESHLHHFLHDNINAEIVAGIIENKQDAVDY 1786
Query: 192 LTWTFMYRRLTQNPNYYNLQGVSNRHLSDHLSELVENTLSDLETSKCLSIANDMDISSTN 371
+TWT MYRRLTQNPNYYNLQGVS+RHLSDHLSELVE+TLSDLE SKC+SI +DMD+S +N
Sbjct: 1787 ITWTLMYRRLTQNPNYYNLQGVSHRHLSDHLSELVEHTLSDLEASKCISIEDDMDLSPSN 1846
Query: 372 LGMIASYYYISY 407
LGMIASYYYISY
Sbjct: 1847 LGMIASYYYISY 1858
Score = 65.5 bits (158), Expect = 8e-09
Identities = 36/115 (31%), Positives = 67/115 (58%), Gaps = 5/115 (4%)
Frame = +3
Query: 78 SSLNEPFPVESH-LHHLHDKLNAEVVVGVIENKQQAVDYLTWTFMYRRLTQNPNYYNLQG 254
S +N+ P+ES + L D+LNAE+V+G ++N ++A ++L +T++Y R+ +NP Y L
Sbjct: 910 SLMNQQLPIESQFVSKLADQLNAEIVLGTVQNAREASNWLGYTYLYVRMLRNPTLYGLAA 969
Query: 255 ---VSNRHLSDHLSELVENTLSDLETSKCLSIANDMD-ISSTNLGMIASYYYISY 407
+ L + ++L+ + + L+ + + T+LG IASYYYI++
Sbjct: 970 DAPTRDITLEERRADLIHSAATILDKNNLVKYDRKSGYFQVTDLGRIASYYYITH 1024
Score = 62.0 bits (149), Expect = 8e-08
Identities = 26/33 (78%), Positives = 28/33 (84%)
Frame = +2
Query: 2 ANRPLIDNSGKCVILCHAPRKEYYKKFFERTIP 100
A+RPL+DNSGKCVILCHAPRKEYYKKF P
Sbjct: 1723 ASRPLLDNSGKCVILCHAPRKEYYKKFLYEAFP 1755
>ref|XP_003369226.1| putative Sec63 domain protein [Trichinella spiralis]
gi|316966601|gb|EFV51154.1| putative Sec63 domain protein
[Trichinella spiralis]
Length = 1792
Score = 171 bits (433), Expect(2) = 1e-45
Identities = 81/109 (74%), Positives = 93/109 (85%), Gaps = 1/109 (0%)
Frame = +3
Query: 84 LNEPFPVESHLHH-LHDKLNAEVVVGVIENKQQAVDYLTWTFMYRRLTQNPNYYNLQGVS 260
L EP P+ESHL H LHD NAEVV IENKQ+A+DYLTWTF+YRR+TQNPNYYNLQGVS
Sbjct: 1464 LFEPLPIESHLDHCLHDHFNAEVVTKTIENKQEAIDYLTWTFLYRRMTQNPNYYNLQGVS 1523
Query: 261 NRHLSDHLSELVENTLSDLETSKCLSIANDMDISSTNLGMIASYYYISY 407
+RHLSDHLSELVE+TL+DLE SKCL+I NDMD+ NLG+IA+YY I Y
Sbjct: 1524 HRHLSDHLSELVEDTLNDLEQSKCLAIINDMDVQPLNLGIIAAYYSIHY 1572
Score = 38.1 bits (87), Expect(2) = 1e-45
Identities = 16/33 (48%), Positives = 20/33 (60%)
Frame = +2
Query: 2 ANRPLIDNSGKCVILCHAPRKEYYKKFFERTIP 100
ANR ID KCV+LC +K +YKKF +P
Sbjct: 1437 ANRSDIDEDAKCVLLCQNSKKAFYKKFLFEPLP 1469
Score = 57.8 bits (138), Expect = 2e-06
Identities = 37/138 (26%), Positives = 67/138 (48%), Gaps = 4/138 (2%)
Frame = +3
Query: 9 DPL*IILENASFSAMLLEKNTTRSSLNEPFPVESHLHHLHDKLNAEVVVGVIENKQQAVD 188
D L + + S S +L + + S+ + L D LNAE+V+G + N ++AVD
Sbjct: 728 DTLSMFMREGSASTEILRREADQLSVESQM-----ISKLADCLNAEIVLGTVNNVREAVD 782
Query: 189 YLTWTFMYRRLTQNPNYYNLQGVSNRH---LSDHLSELVENTLSDLETSKCLSIANDMDI 359
+L +T++Y R+ + P Y + ++ L ++L+ + L+ + I
Sbjct: 783 WLAYTYLYIRMLRAPTLYGINHDEVKNDPLLEQRRADLIHTAATLLDKCNMIKYERRSGI 842
Query: 360 -SSTNLGMIASYYYISYE 410
T LG IASY+Y ++E
Sbjct: 843 FQVTELGRIASYFYCTHE 860
>ref|XP_006598183.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
isoform X1 [Glycine max]
Length = 2183
Score = 187 bits (475), Expect = 1e-45
Identities = 89/116 (76%), Positives = 100/116 (86%), Gaps = 1/116 (0%)
Frame = +3
Query: 63 KNTTRSSLNEPFPVESHLHH-LHDKLNAEVVVGVIENKQQAVDYLTWTFMYRRLTQNPNY 239
K + L E FPVESHLHH LHD LNAE+V G+IENKQ AVDYLTWTFMYRRLTQNPNY
Sbjct: 1749 KEYYKKFLYEAFPVESHLHHFLHDNLNAEIVAGIIENKQDAVDYLTWTFMYRRLTQNPNY 1808
Query: 240 YNLQGVSNRHLSDHLSELVENTLSDLETSKCLSIANDMDISSTNLGMIASYYYISY 407
YNLQGVS+RHLSDHLSE+VENTLSDLE KC++I +DM+++ NLGMIASYYYISY
Sbjct: 1809 YNLQGVSHRHLSDHLSEMVENTLSDLEAGKCITIEDDMELAPLNLGMIASYYYISY 1864
Score = 63.9 bits (154), Expect = 2e-08
Identities = 36/115 (31%), Positives = 68/115 (59%), Gaps = 5/115 (4%)
Frame = +3
Query: 78 SSLNEPFPVESH-LHHLHDKLNAEVVVGVIENKQQAVDYLTWTFMYRRLTQNPNYYNL-Q 251
S +N+ P+ES + L D+LNAE+V+G ++N ++A +++ +T++Y R+ +NP+ Y +
Sbjct: 917 SLMNQQLPIESQFVSKLADQLNAEIVLGTVQNAREACNWIGYTYLYVRMLRNPSLYGIAP 976
Query: 252 GVSNRH--LSDHLSELVENTLSDLETSKCLSIANDMD-ISSTNLGMIASYYYISY 407
V R L + ++L+ + L+ + + T+LG IASYYYI++
Sbjct: 977 DVLTRDITLEERRADLIHTAATILDRNNLVKYDRKSGYFQVTDLGRIASYYYITH 1031
Score = 62.4 bits (150), Expect = 6e-08
Identities = 26/33 (78%), Positives = 28/33 (84%)
Frame = +2
Query: 2 ANRPLIDNSGKCVILCHAPRKEYYKKFFERTIP 100
A+RPL+DNSGKCVILCHAPRKEYYKKF P
Sbjct: 1729 ASRPLVDNSGKCVILCHAPRKEYYKKFLYEAFP 1761
>ref|XP_003531516.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
[Glycine max]
Length = 2183
Score = 187 bits (475), Expect = 1e-45
Identities = 89/116 (76%), Positives = 100/116 (86%), Gaps = 1/116 (0%)
Frame = +3
Query: 63 KNTTRSSLNEPFPVESHLHH-LHDKLNAEVVVGVIENKQQAVDYLTWTFMYRRLTQNPNY 239
K + L E FPVESHLHH LHD LNAE+V G+IENKQ AVDYLTWTFMYRRLTQNPNY
Sbjct: 1749 KEYYKKFLYEAFPVESHLHHFLHDNLNAEIVAGIIENKQDAVDYLTWTFMYRRLTQNPNY 1808
Query: 240 YNLQGVSNRHLSDHLSELVENTLSDLETSKCLSIANDMDISSTNLGMIASYYYISY 407
YNLQGVS+RHLSDHLSE+VENTLSDLE KC++I +DM+++ NLGMIASYYYISY
Sbjct: 1809 YNLQGVSHRHLSDHLSEMVENTLSDLEAGKCITIEDDMELAPLNLGMIASYYYISY 1864
Score = 63.9 bits (154), Expect = 2e-08
Identities = 36/115 (31%), Positives = 68/115 (59%), Gaps = 5/115 (4%)
Frame = +3
Query: 78 SSLNEPFPVESH-LHHLHDKLNAEVVVGVIENKQQAVDYLTWTFMYRRLTQNPNYYNL-Q 251
S +N+ P+ES + L D+LNAE+V+G ++N ++A +++ +T++Y R+ +NP+ Y +
Sbjct: 917 SLMNQQLPIESQFVSKLADQLNAEIVLGTVQNAREACNWIGYTYLYVRMLRNPSLYGIAP 976
Query: 252 GVSNRH--LSDHLSELVENTLSDLETSKCLSIANDMD-ISSTNLGMIASYYYISY 407
V R L + ++L+ + L+ + + T+LG IASYYYI++
Sbjct: 977 DVLTRDITLEERRADLIHTAATILDRNNLVKYDRKSGYFQVTDLGRIASYYYITH 1031
Score = 62.4 bits (150), Expect = 6e-08
Identities = 26/33 (78%), Positives = 28/33 (84%)
Frame = +2
Query: 2 ANRPLIDNSGKCVILCHAPRKEYYKKFFERTIP 100
A+RPL+DNSGKCVILCHAPRKEYYKKF P
Sbjct: 1729 ASRPLVDNSGKCVILCHAPRKEYYKKFLYEAFP 1761
>ref|XP_001757495.1| predicted protein [Physcomitrella patens] gi|162691189|gb|EDQ77552.1|
predicted protein [Physcomitrella patens]
Length = 2180
Score = 187 bits (475), Expect = 1e-45
Identities = 92/116 (79%), Positives = 102/116 (87%), Gaps = 1/116 (0%)
Frame = +3
Query: 63 KNTTRSSLNEPFPVESHL-HHLHDKLNAEVVVGVIENKQQAVDYLTWTFMYRRLTQNPNY 239
K + L EPFPVESHL H+LHD LNAEVVV IENKQ AVDYLTWTFMYRRLTQNPNY
Sbjct: 1743 KEYYKKFLYEPFPVESHLDHYLHDHLNAEVVVRTIENKQDAVDYLTWTFMYRRLTQNPNY 1802
Query: 240 YNLQGVSNRHLSDHLSELVENTLSDLETSKCLSIANDMDISSTNLGMIASYYYISY 407
YNLQGVS+RHLSDHLSELVE+TLSDLE+SKC++I +DMD+S NLGMIA+YYYISY
Sbjct: 1803 YNLQGVSHRHLSDHLSELVESTLSDLESSKCVAIEDDMDLSPLNLGMIAAYYYISY 1858
Score = 65.5 bits (158), Expect(2) = 1e-09
Identities = 37/115 (32%), Positives = 67/115 (58%), Gaps = 5/115 (4%)
Frame = +3
Query: 78 SSLNEPFPVES-HLHHLHDKLNAEVVVGVIENKQQAVDYLTWTFMYRRLTQNPNYYNLQG 254
S +N+ P+ES ++ L D LNAE+V+G +++ ++A D+L +T++Y R+ +NP Y +
Sbjct: 911 SLMNQQLPIESQYISKLADNLNAEIVLGSVQDAREACDWLGYTYLYIRMLKNPTLYGVSR 970
Query: 255 ---VSNRHLSDHLSELVENTLSDLETSKCLSIANDMD-ISSTNLGMIASYYYISY 407
++ L + ++LV + L+ + + T+LG IASYYYIS+
Sbjct: 971 EALEADPSLEERRADLVHSAAIVLDRNNLVKYDRKSGYFQVTDLGRIASYYYISH 1025
Score = 22.3 bits (46), Expect(2) = 1e-09
Identities = 9/33 (27%), Positives = 15/33 (45%)
Frame = +2
Query: 2 ANRPLIDNSGKCVILCHAPRKEYYKKFFERTIP 100
A RP D G+ +I+ +YY + +P
Sbjct: 886 AGRPQFDTYGEGIIITGHSELQYYLSLMNQQLP 918
Score = 57.4 bits (137), Expect = 2e-06
Identities = 24/33 (72%), Positives = 26/33 (78%)
Frame = +2
Query: 2 ANRPLIDNSGKCVILCHAPRKEYYKKFFERTIP 100
A+RP +D SGKCVILCHAPRKEYYKKF P
Sbjct: 1723 ASRPQVDTSGKCVILCHAPRKEYYKKFLYEPFP 1755
>ref|XP_002322252.1| U5 small nuclear ribonucleoprotein helicase [Populus trichocarpa]
gi|222869248|gb|EEF06379.1| U5 small nuclear
ribonucleoprotein helicase [Populus trichocarpa]
Length = 2157
Score = 187 bits (474), Expect = 2e-45
Identities = 92/116 (79%), Positives = 98/116 (84%), Gaps = 1/116 (0%)
Frame = +3
Query: 63 KNTTRSSLNEPFPVESHLHH-LHDKLNAEVVVGVIENKQQAVDYLTWTFMYRRLTQNPNY 239
K + L E FPVESHLHH LHD NAEVV GVIENKQ AVDYLTWTF YRRLTQNPNY
Sbjct: 1722 KEYYKKFLYEAFPVESHLHHFLHDNFNAEVVAGVIENKQDAVDYLTWTFTYRRLTQNPNY 1781
Query: 240 YNLQGVSNRHLSDHLSELVENTLSDLETSKCLSIANDMDISSTNLGMIASYYYISY 407
YNLQGVS+RHLSDHLSELVENTL+DLE SKC++I DMD+S NLGMIASYYYISY
Sbjct: 1782 YNLQGVSHRHLSDHLSELVENTLTDLERSKCVAIEEDMDLSPLNLGMIASYYYISY 1837
Score = 65.9 bits (159), Expect = 6e-09
Identities = 38/115 (33%), Positives = 67/115 (58%), Gaps = 5/115 (4%)
Frame = +3
Query: 78 SSLNEPFPVESH-LHHLHDKLNAEVVVGVIENKQQAVDYLTWTFMYRRLTQNPNYYNL-Q 251
S +N+ P+ES + L D+LNAE+V+G ++N ++A +L +T++Y R+ +NP Y L
Sbjct: 885 SLMNQQLPIESQFISKLADQLNAEIVLGTVQNAREACHWLGYTYLYIRMLRNPTLYGLAP 944
Query: 252 GVSNRH--LSDHLSELVENTLSDLETSKCLSIANDMD-ISSTNLGMIASYYYISY 407
V R L + ++L+ + + L+ + + T+LG IASYYYI++
Sbjct: 945 DVLTRDITLEERRADLIHSAAAILDKNNLVKYDRKSGYFQGTDLGRIASYYYITH 999
Score = 60.5 bits (145), Expect = 2e-07
Identities = 25/33 (75%), Positives = 27/33 (81%)
Frame = +2
Query: 2 ANRPLIDNSGKCVILCHAPRKEYYKKFFERTIP 100
A+RPL+DNSGKCVI CHAPRKEYYKKF P
Sbjct: 1702 ASRPLLDNSGKCVIFCHAPRKEYYKKFLYEAFP 1734