BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia24_contig00028746
         (800 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118...   251   2e-64
gb|ACS74199.1| putative gag-pol polyprotein [Fragaria x ananassa]     251   3e-64
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]     238   2e-60
gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group]     238   2e-60
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-...   238   2e-60
gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]     236   7e-60
gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subc...   236   7e-60
emb|CAN65222.1| hypothetical protein VITISV_038665 [Vitis vinifera]   235   2e-59
gb|ABA99474.1| retrotransposon protein, putative, Ty1-copia subc...   234   3e-59
emb|CAN81634.1| hypothetical protein VITISV_034565 [Vitis vinifera]   234   3e-59
gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula]              234   4e-59
gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula]              233   5e-59
gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula]              233   5e-59
emb|CAI44659.1| OSJNBa0061C06.9 [Oryza sativa Japonica Group]         233   8e-59
gb|AFB73911.1| polyprotein [Citrus sinensis]                          232   1e-58
emb|CAD40121.3| OSJNBa0061C06.5 [Oryza sativa Japonica Group]         232   1e-58
gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subc...   231   2e-58
gb|AAT44257.1| putative polyprotein [Oryza sativa Japonica Group]     231   3e-58
gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula]              230   5e-58
gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group...   229   9e-58

>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1|
            copia LTR rider [Solanum lycopersicum]
          Length = 1307

 Score =  251 bits (642), Expect = 2e-64
 Identities = 128/225 (56%), Positives = 165/225 (73%), Gaps = 6/225 (2%)
 Frame = -1

Query: 662  VQESIGTSRPKR-NVRK-LGWLVTDMVAYALPIILD---DVPSTYKEAMQNSESTIWERA 498
            + +SI   RP+R  VR    +   DMV YAL +  +     PSTYKEA+ +S+S  W  A
Sbjct: 750  IHQSIAQDRPRRVGVRPPTRYGFEDMVGYALQVAEEVDTSEPSTYKEAILSSDSEKWFAA 809

Query: 497  MHEEM*SLHKNETWELSKLPKGKKVIGCKWVYTKKEG-SPGEDVRFKARLVVKGYAQKEG 321
            M +EM SLHKN+TW+L   P G+K+I CKWV+ KKEG SP E V++KAR+V +G+ Q+EG
Sbjct: 810  MGDEMESLHKNQTWDLVIQPSGRKIITCKWVFKKKEGISPAEGVKYKARVVARGFNQREG 869

Query: 320  IDYNEVFSPVVKHSSIRILLALVAQFDLESAQLNVNTTFLHGNLDEEIYMSQTSEFKVAG 141
            +DYNE+FSPVV+H+SIR+LLA+VA  +LE  QL+V T FLHG L+EEIYM+Q   F+V G
Sbjct: 870  VDYNEIFSPVVRHTSIRVLLAIVAHQNLELEQLDVKTAFLHGELEEEIYMTQPDGFQVPG 929

Query: 140  KEYYVCKLRKSLYGLKQSPRQWYKRFDTYM*SIGYRRCEANHCAY 6
            KE +VCKL+KSLYGLKQSPRQWYKRFD+YM  +GY R   + C Y
Sbjct: 930  KENHVCKLKKSLYGLKQSPRQWYKRFDSYMVKLGYTRSSYDCCVY 974


>gb|ACS74199.1| putative gag-pol polyprotein [Fragaria x ananassa]
          Length = 1297

 Score =  251 bits (640), Expect = 3e-64
 Identities = 124/222 (55%), Positives = 164/222 (73%), Gaps = 4/222 (1%)
 Frame = -1

Query: 659  QESIGTSRPKRN---VRKLGWLVTDMVAYALPIILDDVPSTYKEAMQNSESTIWERAMHE 489
            + SI   +PKRN   +++ G+   + V+ AL I   D P+TY++A+++ ES  W  AM E
Sbjct: 745  KRSIALDKPKRNRKPIQRFGFEPEEDVSRALSISQGD-PTTYEDAIESVESAGWIGAMTE 803

Query: 488  EM*SLHKNETWELSKLPKGKKVIGCKWVYTKKEGSPGED-VRFKARLVVKGYAQKEGIDY 312
            EM SLHKN  WEL   PK +K++GCKWV+ KKEG   +D + +KARLV KGY+QKEG+DY
Sbjct: 804  EMESLHKNSVWELVPKPKERKLVGCKWVFRKKEGIHEDDAITYKARLVAKGYSQKEGVDY 863

Query: 311  NEVFSPVVKHSSIRILLALVAQFDLESAQLNVNTTFLHGNLDEEIYMSQTSEFKVAGKEY 132
            +E+FSPVVKH+SIR+LL++ AQ+D+E  Q++V T FLHG+L+E+IYMSQ   F   GKE 
Sbjct: 864  DEIFSPVVKHTSIRLLLSIAAQYDMEIEQMDVKTAFLHGDLEEDIYMSQPEGFVETGKEN 923

Query: 131  YVCKLRKSLYGLKQSPRQWYKRFDTYM*SIGYRRCEANHCAY 6
             VC+L+KSLYGLKQSPRQWYK FDTYM  IGY RC+ + C Y
Sbjct: 924  LVCRLKKSLYGLKQSPRQWYKPFDTYMLKIGYTRCQYDCCVY 965


>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1241

 Score =  238 bits (607), Expect = 2e-60
 Identities = 122/225 (54%), Positives = 156/225 (69%), Gaps = 7/225 (3%)
 Frame = -1

Query: 659  QESIGTSRPKRNVRKLGWLVTD--MVAYALPIILD----DVPSTYKEAMQNSESTIWERA 498
            + SI   RPKRN +     + +  +VAYAL +  +      PSTY +A+ + +   W  A
Sbjct: 684  KRSIAKDRPKRNTKPPRRYIEEANIVAYALSVAEEIEGNAEPSTYSDAIVSDDCNRWITA 743

Query: 497  MHEEM*SLHKNETWELSKLPKGKKVIGCKWVYTKKEG-SPGEDVRFKARLVVKGYAQKEG 321
            MH+EM SL KN +WEL KLPK KK I CKW++ +KEG SP ++ R+KARLV KGY+Q  G
Sbjct: 744  MHDEMESLEKNHSWELEKLPKEKKPIRCKWIFKRKEGMSPSDEARYKARLVAKGYSQIPG 803

Query: 320  IDYNEVFSPVVKHSSIRILLALVAQFDLESAQLNVNTTFLHGNLDEEIYMSQTSEFKVAG 141
            ID+N+VFSPVVKHSSIR LL++VA  D E  Q++V T FLHG L+E+IYM Q   F V G
Sbjct: 804  IDFNDVFSPVVKHSSIRTLLSIVAMHDYELEQMDVKTAFLHGELEEDIYMEQPEGFVVPG 863

Query: 140  KEYYVCKLRKSLYGLKQSPRQWYKRFDTYM*SIGYRRCEANHCAY 6
            KE  VC+L+KSLYGLKQSPRQWYKRFD++M S  +RR   + C Y
Sbjct: 864  KENLVCRLKKSLYGLKQSPRQWYKRFDSFMLSQKFRRSNYDSCVY 908


>gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1243

 Score =  238 bits (607), Expect = 2e-60
 Identities = 123/225 (54%), Positives = 155/225 (68%), Gaps = 7/225 (3%)
 Frame = -1

Query: 659  QESIGTSRPKRNVRKLGWLVTD--MVAYALPIIL----DDVPSTYKEAMQNSESTIWERA 498
            + SI   +PKRN++     + +  +VAYAL +      +  PSTY EA+ + +   W  A
Sbjct: 747  KRSIAKDKPKRNIKPPRRYIEEAKIVAYALSVAEKIEGNAEPSTYSEAIVSDDCNRWITA 806

Query: 497  MHEEM*SLHKNETWELSKLPKGKKVIGCKWVYTKKEG-SPGEDVRFKARLVVKGYAQKEG 321
            MH+EM SL KN TWEL KLPK KK I CKW++ +KEG SP ++ R+KARLV KGY+Q  G
Sbjct: 807  MHDEMESLEKNHTWELVKLPKEKKPIRCKWIFKRKEGMSPSDEARYKARLVAKGYSQIPG 866

Query: 320  IDYNEVFSPVVKHSSIRILLALVAQFDLESAQLNVNTTFLHGNLDEEIYMSQTSEFKVAG 141
            ID+N+VFSPVVKHSSIR LL +VA  D E  Q+NV T FLHG L+E+IYM Q   F V G
Sbjct: 867  IDFNDVFSPVVKHSSIRTLLGIVAMHDYELEQMNVKTAFLHGELEEDIYMEQPEGFVVPG 926

Query: 140  KEYYVCKLRKSLYGLKQSPRQWYKRFDTYM*SIGYRRCEANHCAY 6
            KE  VC+L+KSLYGLKQSPRQWYKRFD++M S  +R    + C Y
Sbjct: 927  KENLVCRLKKSLYGLKQSPRQWYKRFDSFMLSQKFRISNYDSCVY 971


>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group] gi|77548751|gb|ABA91548.1|
            retrotransposon protein, putative, Ty1-copia subclass
            [Oryza sativa Japonica Group]
          Length = 2340

 Score =  238 bits (606), Expect = 2e-60
 Identities = 122/225 (54%), Positives = 156/225 (69%), Gaps = 7/225 (3%)
 Frame = -1

Query: 659  QESIGTSRPKRNVRKLGWLVTD--MVAYALPIILD----DVPSTYKEAMQNSESTIWERA 498
            + SI   RPKRN++     + +  +VAYAL +  +      PSTY EA+ + +   W  A
Sbjct: 982  KRSIAKDRPKRNIKPPQRYIEEANIVAYALSVAEEIEGNAEPSTYSEAIVSDDCNRWITA 1041

Query: 497  MHEEM*SLHKNETWELSKLPKGKKVIGCKWVYTKKEG-SPGEDVRFKARLVVKGYAQKEG 321
            MH+EM SL KN TWEL KLPK KK I CKW++ +KEG S  ++ R+KARL+ KGY+Q  G
Sbjct: 1042 MHDEMESLEKNHTWELVKLPKEKKPIRCKWIFKRKEGISSSDEARYKARLIAKGYSQIPG 1101

Query: 320  IDYNEVFSPVVKHSSIRILLALVAQFDLESAQLNVNTTFLHGNLDEEIYMSQTSEFKVAG 141
            ID+N+VFSPVVKHSSIR LL++VA  D E  Q++V T FLHG L+E+IYM Q   F V G
Sbjct: 1102 IDFNDVFSPVVKHSSIRTLLSIVAMHDYELEQMDVKTAFLHGELEEDIYMEQPKGFVVPG 1161

Query: 140  KEYYVCKLRKSLYGLKQSPRQWYKRFDTYM*SIGYRRCEANHCAY 6
            KE  VC+L+KSLYGLKQSPRQWYKRFD++M S  +RR   + C Y
Sbjct: 1162 KENLVCRLKKSLYGLKQSPRQWYKRFDSFMLSQKFRRSNYDSCVY 1206


>gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1280

 Score =  236 bits (602), Expect = 7e-60
 Identities = 120/225 (53%), Positives = 155/225 (68%), Gaps = 7/225 (3%)
 Frame = -1

Query: 659  QESIGTSRPKRNVRKLGWLVTD--MVAYALPIILD----DVPSTYKEAMQNSESTIWERA 498
            + SI   +PKRN++     + +  +VAYAL +  +      PSTY EA+ + +   W  A
Sbjct: 810  KRSIAKDKPKRNIKPPRRYIEEANIVAYALSVAEEIEGNAEPSTYSEAIVSDDCNRWITA 869

Query: 497  MHEEM*SLHKNETWELSKLPKGKKVIGCKWVYTKKEG-SPGEDVRFKARLVVKGYAQKEG 321
            MH+EM SL KN TWE  KLPK KK I CKW++ +KEG SP ++ R+KARLV KGY+Q  G
Sbjct: 870  MHDEMESLKKNHTWEFVKLPKEKKPIRCKWIFKRKEGMSPSDEARYKARLVAKGYSQIPG 929

Query: 320  IDYNEVFSPVVKHSSIRILLALVAQFDLESAQLNVNTTFLHGNLDEEIYMSQTSEFKVAG 141
            ID+N+VFSP++KHSSIR LL +VA  D E  Q++V T FLHG L+E+IYM Q   F V G
Sbjct: 930  IDFNDVFSPIMKHSSIRTLLGIVAMHDYELEQMDVKTAFLHGELEEDIYMEQPEGFVVLG 989

Query: 140  KEYYVCKLRKSLYGLKQSPRQWYKRFDTYM*SIGYRRCEANHCAY 6
            KE  VC+L+KSLYGLKQSPRQWYKRFD++M S  +RR   + C Y
Sbjct: 990  KENLVCRLKKSLYGLKQSPRQWYKRFDSFMLSQKFRRSNYDSCVY 1034


>gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1312

 Score =  236 bits (602), Expect = 7e-60
 Identities = 120/225 (53%), Positives = 155/225 (68%), Gaps = 7/225 (3%)
 Frame = -1

Query: 659  QESIGTSRPKRNVRKLGWLVTD--MVAYALPIILD----DVPSTYKEAMQNSESTIWERA 498
            + SI   +PKRN++     + +  +VAYAL +  +      PSTY EA+ + +   W  A
Sbjct: 810  KRSIAKDKPKRNIKPPRRYIEEANIVAYALSVAEEIEGNAEPSTYSEAIVSDDCNRWITA 869

Query: 497  MHEEM*SLHKNETWELSKLPKGKKVIGCKWVYTKKEG-SPGEDVRFKARLVVKGYAQKEG 321
            MH+EM SL KN TWE  KLPK KK I CKW++ +KEG SP ++ R+KARLV KGY+Q  G
Sbjct: 870  MHDEMESLKKNHTWEFVKLPKEKKPIRCKWIFKRKEGMSPSDEARYKARLVAKGYSQIPG 929

Query: 320  IDYNEVFSPVVKHSSIRILLALVAQFDLESAQLNVNTTFLHGNLDEEIYMSQTSEFKVAG 141
            ID+N+VFSP++KHSSIR LL +VA  D E  Q++V T FLHG L+E+IYM Q   F V G
Sbjct: 930  IDFNDVFSPIMKHSSIRTLLGIVAMHDYELEQMDVKTAFLHGELEEDIYMEQPEGFVVLG 989

Query: 140  KEYYVCKLRKSLYGLKQSPRQWYKRFDTYM*SIGYRRCEANHCAY 6
            KE  VC+L+KSLYGLKQSPRQWYKRFD++M S  +RR   + C Y
Sbjct: 990  KENLVCRLKKSLYGLKQSPRQWYKRFDSFMLSQKFRRSNYDSCVY 1034


>emb|CAN65222.1| hypothetical protein VITISV_038665 [Vitis vinifera]
          Length = 1562

 Score =  235 bits (599), Expect = 2e-59
 Identities = 125/245 (51%), Positives = 166/245 (67%), Gaps = 16/245 (6%)
 Frame = -1

Query: 692  GTDDT*NEAPV-----QESIGTSRPKRNVRK-------LGWLVTDMVAYALPIILD---D 558
            G DDT  E PV      +SI   RP+R +R+       +   +T+ VA+AL +  +   +
Sbjct: 853  GVDDTSEEQPVIDQNDSQSIAAHRPRREIRRPMRYVDCVSANITNPVAFALAVAEEIGRE 912

Query: 557  VPSTYKEAMQNSESTIWERAMHEEM*SLHKNETWELSKLPKGKKVIGCKWVYTKKEG-SP 381
             P +YKEAM++ +S  W  +M +EM SL KN+TWEL  LP+G K + CKW++  K+G S 
Sbjct: 913  EPRSYKEAMESKDSKKWLSSMDDEMASLRKNQTWELVPLPEGVKPVDCKWLFKIKDGISX 972

Query: 380  GEDVRFKARLVVKGYAQKEGIDYNEVFSPVVKHSSIRILLALVAQFDLESAQLNVNTTFL 201
             E  ++K+RLV KG++QKEGIDYNEVFSPVVKH SIR+LLA+V+ F+LE  QL+V T FL
Sbjct: 973  DEPPKYKSRLVAKGFSQKEGIDYNEVFSPVVKHKSIRVLLAMVSVFNLELDQLDVKTAFL 1032

Query: 200  HGNLDEEIYMSQTSEFKVAGKEYYVCKLRKSLYGLKQSPRQWYKRFDTYM*SIGYRRCEA 21
            HGNL+EEIYM Q   F  + K  +VC L+KSLYGLKQSPRQWYKRFD +M S  + R + 
Sbjct: 1033 HGNLEEEIYMKQPEGFVDSEKSDHVCFLKKSLYGLKQSPRQWYKRFDAFMVSHEFMRNQY 1092

Query: 20   NHCAY 6
            + C Y
Sbjct: 1093 DSCVY 1097


>gb|ABA99474.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 983

 Score =  234 bits (597), Expect = 3e-59
 Identities = 119/225 (52%), Positives = 155/225 (68%), Gaps = 7/225 (3%)
 Frame = -1

Query: 659  QESIGTSRPKRNVRKLGWLVTD--MVAYALPIILD----DVPSTYKEAMQNSESTIWERA 498
            + SI   +PKRN++     + +  +VAYAL +  +      PS Y EA+ + +   W   
Sbjct: 517  KRSIAKDKPKRNIKPPRRYIEEANIVAYALSVAEEIEGNAEPSIYSEAIVSDDCNRWITT 576

Query: 497  MHEEM*SLHKNETWELSKLPKGKKVIGCKWVYTKKEG-SPGEDVRFKARLVVKGYAQKEG 321
            MH+EM SL KN TWEL KLPK KK I CKW++ +KEG SP ++ R+KARLV KGY+Q   
Sbjct: 577  MHDEMESLEKNHTWELVKLPKEKKSIRCKWIFKRKEGMSPSDEARYKARLVAKGYSQIPS 636

Query: 320  IDYNEVFSPVVKHSSIRILLALVAQFDLESAQLNVNTTFLHGNLDEEIYMSQTSEFKVAG 141
            ID+N+VFSP+VKHSSIR LL++VA  D E  Q++V T FLHG L+E+IYM Q   F V G
Sbjct: 637  IDFNDVFSPIVKHSSIRTLLSIVAMHDYELEQMDVKTAFLHGELEEDIYMEQPEGFVVPG 696

Query: 140  KEYYVCKLRKSLYGLKQSPRQWYKRFDTYM*SIGYRRCEANHCAY 6
            KE  VC+L+KSLYGLKQSPRQWYKRFD++M S  +RR   ++C Y
Sbjct: 697  KENLVCRLKKSLYGLKQSPRQWYKRFDSFMLSQKFRRSNYDNCVY 741


>emb|CAN81634.1| hypothetical protein VITISV_034565 [Vitis vinifera]
          Length = 595

 Score =  234 bits (597), Expect = 3e-59
 Identities = 118/225 (52%), Positives = 160/225 (71%), Gaps = 2/225 (0%)
 Frame = -1

Query: 674 NEAPVQESIGTSRPKRNVRK-LGWLVTDMVAYALPIILDDVPSTYKEAMQNSESTIWERA 498
           +E     SI   +P+R ++    +   D+V+YAL     D P T++EA+ N E + W  A
Sbjct: 121 SEDQQHHSIAIDKPRRTIKPPTRYGFEDLVSYALITSSKD-PITFQEAIHNQEKSRWMGA 179

Query: 497 MHEEM*SLHKNETWELSKLPKGKKVIGCKWVYTKKEG-SPGEDVRFKARLVVKGYAQKEG 321
           M EE+  LHKN+TW+L + P+GK+ IGCKWVY KKE  S  E  +FKARLV KGY+Q++G
Sbjct: 180 MVEEIQFLHKNQTWDLVEPPEGKRAIGCKWVYKKKEAISKKEGEKFKARLVAKGYSQRKG 239

Query: 320 IDYNEVFSPVVKHSSIRILLALVAQFDLESAQLNVNTTFLHGNLDEEIYMSQTSEFKVAG 141
           +DY+E+FSP+V+H+SIR +L LVA FD++  Q++V TTFLHG+L+E +YM Q   F   G
Sbjct: 240 VDYDEIFSPMVRHTSIRTVLGLVAHFDMQLEQMDVETTFLHGDLEELVYMVQPEGFIQPG 299

Query: 140 KEYYVCKLRKSLYGLKQSPRQWYKRFDTYM*SIGYRRCEANHCAY 6
           +E+ VCKLRKSLYGLKQSPRQWYK FD+Y+  IGY+RCE +   Y
Sbjct: 300 QEHLVCKLRKSLYGLKQSPRQWYKCFDSYIIRIGYKRCEYDCFVY 344


>gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula]
          Length = 1305

 Score =  234 bits (596), Expect = 4e-59
 Identities = 118/226 (52%), Positives = 155/226 (68%), Gaps = 4/226 (1%)
 Frame = -1

Query: 671  EAPVQESIGTSRPKRNVRKLGW----LVTDMVAYALPIILDDVPSTYKEAMQNSESTIWE 504
            + P   + G  R  R  +K  W    ++T   AY L I  +  PST+ EA+  S+++ W 
Sbjct: 746  QEPDDVNDGVRRSTRQTQKPSWQSDYVMTSHDAYCL-ITEEGEPSTFHEALNGSDASQWM 804

Query: 503  RAMHEEM*SLHKNETWELSKLPKGKKVIGCKWVYTKKEGSPGEDVRFKARLVVKGYAQKE 324
             AMHEEM +LH+N+TWEL +LPKG+K IG KWVY  K     +  R++ARLVVKGYAQKE
Sbjct: 805  TAMHEEMEALHRNKTWELVELPKGRKAIGNKWVYKIKRDGNDQVERYRARLVVKGYAQKE 864

Query: 323  GIDYNEVFSPVVKHSSIRILLALVAQFDLESAQLNVNTTFLHGNLDEEIYMSQTSEFKVA 144
            GID+NE+FSPVV+ ++IR++LA+ A  DL   QL+V T FLHG L+EEIYM Q   FK  
Sbjct: 865  GIDFNEIFSPVVRLTTIRVVLAMCAALDLHLEQLDVKTAFLHGELEEEIYMLQPEGFKEQ 924

Query: 143  GKEYYVCKLRKSLYGLKQSPRQWYKRFDTYM*SIGYRRCEANHCAY 6
            GKE  VC+L KSLYGLKQ+PR WYKRFD+++ S+ Y R  ++HC Y
Sbjct: 925  GKENLVCRLTKSLYGLKQAPRCWYKRFDSFIISLDYNRLSSDHCTY 970


>gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula]
          Length = 1305

 Score =  233 bits (595), Expect = 5e-59
 Identities = 118/226 (52%), Positives = 155/226 (68%), Gaps = 4/226 (1%)
 Frame = -1

Query: 671  EAPVQESIGTSRPKRNVRKLGW----LVTDMVAYALPIILDDVPSTYKEAMQNSESTIWE 504
            + P   + G  R  R  +K  W    ++T   AY L I  +  PST+ EA+  S+++ W 
Sbjct: 746  QEPDDVNDGVRRSTRQTQKPSWQSDYVMTSHDAYCL-ITEEGEPSTFHEALNGSDASQWM 804

Query: 503  RAMHEEM*SLHKNETWELSKLPKGKKVIGCKWVYTKKEGSPGEDVRFKARLVVKGYAQKE 324
             AMHEEM +LH+N+TWEL +LPKG+K IG KWVY  K     +  R++ARLVVKGYAQKE
Sbjct: 805  TAMHEEMEALHRNKTWELVELPKGRKAIGNKWVYKIKRDGNDQVERYRARLVVKGYAQKE 864

Query: 323  GIDYNEVFSPVVKHSSIRILLALVAQFDLESAQLNVNTTFLHGNLDEEIYMSQTSEFKVA 144
            GID+NE+FSPVV+ ++IR++LA+ A  DL   QL+V T FLHG L+EEIYM Q   FK  
Sbjct: 865  GIDFNEIFSPVVRLTTIRVVLAMCAALDLHLEQLDVKTAFLHGELEEEIYMLQPEGFKEQ 924

Query: 143  GKEYYVCKLRKSLYGLKQSPRQWYKRFDTYM*SIGYRRCEANHCAY 6
            GKE  VC+L KSLYGLKQ+PR WYKRFD+++ S+ Y R  ++HC Y
Sbjct: 925  GKENLVCRLTKSLYGLKQAPRCWYKRFDSFIISLDYSRLSSDHCTY 970


>gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula]
          Length = 1305

 Score =  233 bits (595), Expect = 5e-59
 Identities = 118/226 (52%), Positives = 155/226 (68%), Gaps = 4/226 (1%)
 Frame = -1

Query: 671  EAPVQESIGTSRPKRNVRKLGW----LVTDMVAYALPIILDDVPSTYKEAMQNSESTIWE 504
            + P   + G  R  R  +K  W    ++T   AY L I  +  PST+ EA+  S+++ W 
Sbjct: 746  QEPDDVNNGVRRSTRQTQKPSWQSDYVMTSHDAYCL-ITEEGEPSTFHEALNGSDASQWM 804

Query: 503  RAMHEEM*SLHKNETWELSKLPKGKKVIGCKWVYTKKEGSPGEDVRFKARLVVKGYAQKE 324
             AMHEEM +LH+N+TWEL +LPKG+K IG KWVY  K     +  R++ARLVVKGYAQKE
Sbjct: 805  TAMHEEMEALHRNKTWELVELPKGRKAIGNKWVYKIKRDGNDQVERYRARLVVKGYAQKE 864

Query: 323  GIDYNEVFSPVVKHSSIRILLALVAQFDLESAQLNVNTTFLHGNLDEEIYMSQTSEFKVA 144
            GID+NE+FSPVV+ ++IR++LA+ A  DL   QL+V T FLHG L+EEIYM Q   FK  
Sbjct: 865  GIDFNEIFSPVVRLTTIRVVLAMCAALDLHLEQLDVKTAFLHGELEEEIYMLQPEGFKEQ 924

Query: 143  GKEYYVCKLRKSLYGLKQSPRQWYKRFDTYM*SIGYRRCEANHCAY 6
            GKE  VC+L KSLYGLKQ+PR WYKRFD+++ S+ Y R  ++HC Y
Sbjct: 925  GKENLVCRLTKSLYGLKQAPRCWYKRFDSFIISLDYSRLSSDHCTY 970


>emb|CAI44659.1| OSJNBa0061C06.9 [Oryza sativa Japonica Group]
          Length = 1007

 Score =  233 bits (593), Expect = 8e-59
 Identities = 123/234 (52%), Positives = 159/234 (67%), Gaps = 11/234 (4%)
 Frame = -1

Query: 674  NEAPVQES----IGTSRPKRNVRKLGWLVTD--MVAYALPIILD----DVPSTYKEAMQN 525
            + + VQ+S    I   +PKRN +     + +  +VAYAL +  D      PSTY EA+ +
Sbjct: 548  DSSTVQQSPKRFIAKDKPKRNTKPPQRYIEEANIVAYALSVAEDIEGNAEPSTYSEAIVS 607

Query: 524  SESTIWERAMHEEM*SLHKNETWELSKLPKGKKVIGCKWVYTKKEG-SPGEDVRFKARLV 348
             +   W  AMH+EM SL KN TWEL KLPK KK I CKW++ +K+G SP ++  +KARLV
Sbjct: 608  DDCNRWITAMHDEMESLEKNHTWELVKLPKEKKPIRCKWIFKRKKGISPSDEAMYKARLV 667

Query: 347  VKGYAQKEGIDYNEVFSPVVKHSSIRILLALVAQFDLESAQLNVNTTFLHGNLDEEIYMS 168
             KGY+Q  GID+N+VFSPVVKHSSIR LL++VA  D E  Q++V T FLHG L+E+IYM 
Sbjct: 668  AKGYSQIPGIDFNDVFSPVVKHSSIRTLLSIVAMHDYELEQMDVKTAFLHGELEEDIYME 727

Query: 167  QTSEFKVAGKEYYVCKLRKSLYGLKQSPRQWYKRFDTYM*SIGYRRCEANHCAY 6
            Q+  F V GKE  VC+L+KSLYGLKQS RQWYKRFD++M S  +RR   + C Y
Sbjct: 728  QSEGFVVPGKENLVCRLKKSLYGLKQSSRQWYKRFDSFMLSQKFRRSNYDSCVY 781


>gb|AFB73911.1| polyprotein [Citrus sinensis]
          Length = 1309

 Score =  232 bits (592), Expect = 1e-58
 Identities = 121/227 (53%), Positives = 158/227 (69%), Gaps = 5/227 (2%)
 Frame = -1

Query: 671  EAPVQ-ESIGTSRPKRNVRKLGW---LVTDM-VAYALPIILDDVPSTYKEAMQNSESTIW 507
            + PV+ E+    R  R  R   W    VT++ VAY L +  D  PST+ EA+ +S+  +W
Sbjct: 749  QEPVESEAPEVRRSTRERRPPTWHSEYVTEINVAYCL-LTEDGEPSTFHEALNSSDVALW 807

Query: 506  ERAMHEEM*SLHKNETWELSKLPKGKKVIGCKWVYTKKEGSPGEDVRFKARLVVKGYAQK 327
              AM EE+ +LHKN+TWEL  LP+G+K IG KWVY  K     +  R++ARLVVKGYAQK
Sbjct: 808  MTAMQEEIEALHKNKTWELVPLPRGRKAIGNKWVYKIKRDGNDQVERYRARLVVKGYAQK 867

Query: 326  EGIDYNEVFSPVVKHSSIRILLALVAQFDLESAQLNVNTTFLHGNLDEEIYMSQTSEFKV 147
            EGID+NE+FSPVV+ +++RI+LA+ A FDL   QL+V T FLHG L+EEIYM Q   F  
Sbjct: 868  EGIDFNEIFSPVVRLTTVRIVLAMCATFDLHLEQLDVKTAFLHGELEEEIYMLQPEGFAE 927

Query: 146  AGKEYYVCKLRKSLYGLKQSPRQWYKRFDTYM*SIGYRRCEANHCAY 6
             GKE  VC+L KSLYGLKQ+PR WYKRFD+++ S+GY R  ++HCAY
Sbjct: 928  TGKENLVCRLNKSLYGLKQAPRYWYKRFDSFIMSLGYNRLSSDHCAY 974


>emb|CAD40121.3| OSJNBa0061C06.5 [Oryza sativa Japonica Group]
          Length = 621

 Score =  232 bits (591), Expect = 1e-58
 Identities = 121/230 (52%), Positives = 156/230 (67%), Gaps = 7/230 (3%)
 Frame = -1

Query: 674 NEAPVQESIGTSRPKRNVRKLGWLVTD--MVAYALPIILD----DVPSTYKEAMQNSEST 513
           +E   + SI   +PKR+ +     + +  +VAYAL +  +      PSTY EA+ + +  
Sbjct: 156 HEQSPKRSIAKEKPKRSTKPPQRYIEEANIVAYALSVAEEIEGNAEPSTYSEAIVSDDCN 215

Query: 512 IWERAMHEEM*SLHKNETWELSKLPKGKKVIGCKWVYTKKEG-SPGEDVRFKARLVVKGY 336
            W  AMH+EM SL KN TWEL KLPK KK I CKW++ +KE  SP ++  +KARLV KGY
Sbjct: 216 RWITAMHDEMESLEKNHTWELVKLPKEKKPIRCKWIFKRKECISPSDEAMYKARLVAKGY 275

Query: 335 AQKEGIDYNEVFSPVVKHSSIRILLALVAQFDLESAQLNVNTTFLHGNLDEEIYMSQTSE 156
           +Q  GID+N+VFSPVVKHSSIR LL++VA  D E  Q++V T FLHG L+E+IYM Q   
Sbjct: 276 SQIPGIDFNDVFSPVVKHSSIRTLLSIVAMHDYELEQMDVKTAFLHGELEEDIYMEQPEG 335

Query: 155 FKVAGKEYYVCKLRKSLYGLKQSPRQWYKRFDTYM*SIGYRRCEANHCAY 6
           F V GKE  VC+L+KSLYGLKQSPRQWYKRFD++M S  +RR   + C Y
Sbjct: 336 FVVPGKENLVCRLKKSLYGLKQSPRQWYKRFDSFMLSQKFRRSNYDSCVY 385


>gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1278

 Score =  231 bits (590), Expect = 2e-58
 Identities = 126/228 (55%), Positives = 152/228 (66%), Gaps = 8/228 (3%)
 Frame = -1

Query: 665  PVQESIGTSRPKRNVRKLGWLVT--DMVAYALPIILDDV-----PSTYKEAMQNSESTIW 507
            P  E I   R KR+      L+   DMV YA     + V     P+TY EA+ + +   W
Sbjct: 763  PQDEPIAHRRTKRSCGAPVRLIEECDMVYYAFSCA-EQVENTLEPATYTEAVVSGDREKW 821

Query: 506  ERAMHEEM*SLHKNETWELSKLPKGKKVIGCKWVYTKKEG-SPGEDVRFKARLVVKGYAQ 330
              AM EEM SL KN TWEL  LPK KK + CKW++ +KEG SP E  RFKARLV KG++Q
Sbjct: 822  ISAMQEEMQSLEKNGTWELVHLPKQKKPVRCKWIFKRKEGLSPSEPPRFKARLVAKGFSQ 881

Query: 329  KEGIDYNEVFSPVVKHSSIRILLALVAQFDLESAQLNVNTTFLHGNLDEEIYMSQTSEFK 150
              G+DYN+VFSPVVKHSSIR   ++VA  DLE  QL+V T FLHG L+EEIYM Q   F 
Sbjct: 882  IVGVDYNDVFSPVVKHSSIRTFFSIVAMHDLELEQLDVKTAFLHGELEEEIYMDQPEGFI 941

Query: 149  VAGKEYYVCKLRKSLYGLKQSPRQWYKRFDTYM*SIGYRRCEANHCAY 6
            V GKE YVCKL++SLYGLKQSPRQWYKRFD++M S G++R E + C Y
Sbjct: 942  VPGKEDYVCKLKRSLYGLKQSPRQWYKRFDSFMLSHGFKRSEFDSCVY 989


>gb|AAT44257.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1211

 Score =  231 bits (588), Expect = 3e-58
 Identities = 120/225 (53%), Positives = 155/225 (68%), Gaps = 7/225 (3%)
 Frame = -1

Query: 659  QESIGTSRPKRNVRKLGWLVTD--MVAYALPIILD----DVPSTYKEAMQNSESTIWERA 498
            + SI   +PKRN++     + +  +VAYAL +  +      PSTY EA+ +     W  A
Sbjct: 654  KRSIAKDKPKRNIKPPRRYIEEANIVAYALSVAEEIEGNAEPSTYSEAIVSDGCNRWITA 713

Query: 497  MHEEM*SLHKNETWELSKLPKGKKVIGCKWVYTKKEG-SPGEDVRFKARLVVKGYAQKEG 321
            MH+EM SL KN TWEL KLPK KK I CKW++ +K+G SP ++ R+KARLV KGY+Q  G
Sbjct: 714  MHDEMESLEKNHTWELVKLPKEKKPIRCKWIFKRKKGMSPSDEARYKARLVAKGYSQIPG 773

Query: 320  IDYNEVFSPVVKHSSIRILLALVAQFDLESAQLNVNTTFLHGNLDEEIYMSQTSEFKVAG 141
            ID+N+VFSPV+KHSSIR LL++VA  D E  Q++V T FLHG L+E+IYM Q   F V G
Sbjct: 774  IDFNDVFSPVLKHSSIRTLLSIVAVHDYELEQMDVKTAFLHGELEEDIYMEQPEGFVVPG 833

Query: 140  KEYYVCKLRKSLYGLKQSPRQWYKRFDTYM*SIGYRRCEANHCAY 6
            KE  V +L+KSLYGLKQSPRQWYKRFD++M S  +RR   + C Y
Sbjct: 834  KENLVYRLKKSLYGLKQSPRQWYKRFDSFMFSQKFRRSNYDSCVY 878


>gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula]
          Length = 1305

 Score =  230 bits (586), Expect = 5e-58
 Identities = 117/226 (51%), Positives = 154/226 (68%), Gaps = 4/226 (1%)
 Frame = -1

Query: 671  EAPVQESIGTSRPKRNVRKLGW----LVTDMVAYALPIILDDVPSTYKEAMQNSESTIWE 504
            + P   + G  R  R  +K  W    ++T   AY L I  +  PST+ EA+  S+++ W 
Sbjct: 746  QEPDDVNNGVRRSTRQTQKPSWQSDYVMTGHDAYCL-IAEEGEPSTFHEALNGSDASQWM 804

Query: 503  RAMHEEM*SLHKNETWELSKLPKGKKVIGCKWVYTKKEGSPGEDVRFKARLVVKGYAQKE 324
             A+HEEM +L KN+TWEL +LPKG+K IG KWVY  K     +  R++ARLVVKGYAQKE
Sbjct: 805  TAIHEEMEALRKNKTWELVELPKGRKAIGNKWVYKIKRDGNDQVERYRARLVVKGYAQKE 864

Query: 323  GIDYNEVFSPVVKHSSIRILLALVAQFDLESAQLNVNTTFLHGNLDEEIYMSQTSEFKVA 144
            GID+NE+FSPVV+ ++IR++LA+ A  DL   QL+V T FLHG L+EEIYM Q   FK  
Sbjct: 865  GIDFNEIFSPVVRLTTIRVVLAMCAALDLHLEQLDVKTAFLHGELEEEIYMLQPEGFKEQ 924

Query: 143  GKEYYVCKLRKSLYGLKQSPRQWYKRFDTYM*SIGYRRCEANHCAY 6
            GKE  VC+L KSLYGLKQ+PR WYKRFD+++ S+ Y R  ++HC Y
Sbjct: 925  GKENLVCRLTKSLYGLKQAPRCWYKRFDSFIISLDYNRLSSDHCTY 970


>gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|53370655|gb|AAU89150.1| integrase core domain
            containing protein [Oryza sativa Japonica Group]
            gi|108710286|gb|ABF98081.1| retrotransposon protein,
            putative, Ty1-copia subclass [Oryza sativa Japonica
            Group]
          Length = 1322

 Score =  229 bits (584), Expect = 9e-58
 Identities = 124/228 (54%), Positives = 151/228 (66%), Gaps = 8/228 (3%)
 Frame = -1

Query: 665  PVQESIGTSRPKRNVRKLGWLVT--DMVAYALPIILDDV-----PSTYKEAMQNSESTIW 507
            P  E I   R KR+      L+   DMV YA     + V     P+TY EA+ + +   W
Sbjct: 763  PQDEPIAHRRTKRSCGAPVRLIEECDMVYYAFSYA-EQVENTLEPATYTEAVVSGDREKW 821

Query: 506  ERAMHEEM*SLHKNETWELSKLPKGKKVIGCKWVYTKKEG-SPGEDVRFKARLVVKGYAQ 330
              A+ EEM SL KN TWEL  LPK KK + CKW++ +KEG SP E  RFK RLV KG++Q
Sbjct: 822  ISAIQEEMQSLEKNGTWELVHLPKQKKPVRCKWIFKRKEGLSPSEPPRFKVRLVAKGFSQ 881

Query: 329  KEGIDYNEVFSPVVKHSSIRILLALVAQFDLESAQLNVNTTFLHGNLDEEIYMSQTSEFK 150
              G+DYN+VFSPVVKHSSIR   ++V   DLE  QL+V TTFLHG L+EEIYM Q   F 
Sbjct: 882  IAGVDYNDVFSPVVKHSSIRTFFSIVTMHDLELEQLDVKTTFLHGELEEEIYMDQPEGFI 941

Query: 149  VAGKEYYVCKLRKSLYGLKQSPRQWYKRFDTYM*SIGYRRCEANHCAY 6
            V GKE YVCKL++SLYGLKQSPRQWYKRFD++M S G++R E + C Y
Sbjct: 942  VPGKEDYVCKLKRSLYGLKQSPRQWYKRFDSFMLSHGFKRSEFDSCVY 989