BLASTX nr result
ID: Paeonia24_contig00028522
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Paeonia24_contig00028522
(1166 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002280428.1| PREDICTED: pentatricopeptide repeat-containi... 520 e-145
ref|XP_002313416.2| chlororespiratory reduction 2 family protein... 503 e-140
ref|XP_007016304.1| Tetratricopeptide repeat (TPR)-like superfam... 492 e-136
ref|XP_004145327.1| PREDICTED: pentatricopeptide repeat-containi... 491 e-136
ref|XP_002520500.1| pentatricopeptide repeat-containing protein,... 486 e-135
gb|EXC10733.1| hypothetical protein L484_025317 [Morus notabilis] 481 e-133
ref|XP_006427693.1| hypothetical protein CICLE_v10025096mg [Citr... 469 e-129
ref|XP_006493448.1| PREDICTED: pentatricopeptide repeat-containi... 467 e-129
emb|CBI16054.3| unnamed protein product [Vitis vinifera] 465 e-128
ref|XP_002877513.1| hypothetical protein ARALYDRAFT_905886 [Arab... 464 e-128
ref|NP_190263.1| protein CHLORORESPIRATORY REDUCTION 2 [Arabidop... 462 e-128
ref|XP_006418855.1| hypothetical protein EUTSA_v10002433mg [Eutr... 461 e-127
ref|XP_004307227.1| PREDICTED: pentatricopeptide repeat-containi... 456 e-126
ref|XP_006290707.1| hypothetical protein CARUB_v10016805mg [Caps... 453 e-125
ref|XP_003552616.1| PREDICTED: pentatricopeptide repeat-containi... 447 e-123
ref|XP_007139395.1| hypothetical protein PHAVU_008G025900g [Phas... 441 e-121
ref|XP_004491940.1| PREDICTED: pentatricopeptide repeat-containi... 441 e-121
ref|XP_003621549.1| Pentatricopeptide repeat-containing protein ... 439 e-121
ref|XP_003531885.1| PREDICTED: pentatricopeptide repeat-containi... 431 e-118
ref|XP_006353232.1| PREDICTED: pentatricopeptide repeat-containi... 426 e-116
>ref|XP_002280428.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic [Vitis vinifera]
Length = 658
Score = 520 bits (1340), Expect = e-145
Identities = 266/356 (74%), Positives = 292/356 (82%), Gaps = 7/356 (1%)
Frame = -1
Query: 1049 MWAFXXXXXXXXXXXXXXXXXPTRTSLKQLGCSVALRTTTTT-------DNNHLIQSLCR 891
MWAF PT S K C +ALR +TTT +NN LIQSLC+
Sbjct: 1 MWAFQTPQTIQQPHLPKPFHKPTAISPKPQ-CCLALRPSTTTRSNGDSNNNNPLIQSLCK 59
Query: 890 RGNLKRAFQVLSDEPDPTQHTYELLILSCIRQNSLSDGLNVQRHLIDDGLDQDPFLATKL 711
+GNL +A QVLS EP+PTQHTYELLILSC RQNSL G+++ RHLI DG DQDPFLATKL
Sbjct: 60 QGNLNQALQVLSQEPNPTQHTYELLILSCTRQNSLPQGIDLHRHLIHDGSDQDPFLATKL 119
Query: 710 INMFSELDSIDNARKVFDKTRNRTVYVWNALFRALTLAGQGKETLHLYRMMNHTGIPSDR 531
INM+SELDSIDNARKVFDKTR RT+YVWNALFRALTLAG G+E L LYR MN G+PSDR
Sbjct: 120 INMYSELDSIDNARKVFDKTRKRTIYVWNALFRALTLAGYGREVLDLYRRMNRIGVPSDR 179
Query: 530 FTYTYVLKACVASETLTSLLQKGKEIHAHILRHGFEGHVHIMTTLVDMYARFGYVLYASS 351
FTYTYVLKACVASE SLL G+EIH HILRHGFEGHVHIMTTL+DMYARFG VL AS
Sbjct: 180 FTYTYVLKACVASEAFVSLLLNGREIHGHILRHGFEGHVHIMTTLLDMYARFGCVLNASR 239
Query: 350 VFDEMPVKNVVSWSAMIACYAKNGKPFEALELFREMMLETQDSVPNSVTMVSVLQACAAL 171
VFD+MPVKNVVSWSAMIACY+KNGKP EALELFR+MMLE QD +PNSVTMVSVLQACAAL
Sbjct: 240 VFDQMPVKNVVSWSAMIACYSKNGKPLEALELFRKMMLENQDLLPNSVTMVSVLQACAAL 299
Query: 170 SALEQGKLIHAYILRRGLDSILPVISALVTMYARCGNLDWGRRVFDRMEKRDVVSW 3
+ALEQGKL+H YILRRGLDSILPV+SALVT+YARCGNL+ G RVF+RMEKRDVVSW
Sbjct: 300 AALEQGKLMHGYILRRGLDSILPVVSALVTVYARCGNLELGHRVFERMEKRDVVSW 355
Score = 127 bits (320), Expect = 7e-27
Identities = 78/277 (28%), Positives = 149/277 (53%), Gaps = 9/277 (3%)
Frame = -1
Query: 830 TYELLILSCIRQNS----LSDGLNVQRHLIDDGLDQDPFLATKLINMFSELDSIDNARKV 663
TY ++ +C+ + L +G + H++ G + + T L++M++ + NA +V
Sbjct: 181 TYTYVLKACVASEAFVSLLLNGREIHGHILRHGFEGHVHIMTTLLDMYARFGCVLNASRV 240
Query: 662 FDKTRNRTVYVWNALFRALTLAGQGKETLHLYR--MMNHTGIPSDRFTYTYVLKACVASE 489
FD+ + V W+A+ + G+ E L L+R M+ + + + T VL+AC A
Sbjct: 241 FDQMPVKNVVSWSAMIACYSKNGKPLEALELFRKMMLENQDLLPNSVTMVSVLQACAA-- 298
Query: 488 TLTSLLQKGKEIHAHILRHGFEGHVHIMTTLVDMYARFGYVLYASSVFDEMPVKNVVSWS 309
+ L++GK +H +ILR G + + +++ LV +YAR G + VF+ M ++VVSW+
Sbjct: 299 --LAALEQGKLMHGYILRRGLDSILPVVSALVTVYARCGNLELGHRVFERMEKRDVVSWN 356
Query: 308 AMIACYAKNGKPFEALELFREMMLETQDSVPNSVTMVSVLQACAALSALEQGKLIHAYIL 129
++I+ Y +G +A+++F+EM+ Q P+ ++ VSVL AC+ +E+GK++ ++
Sbjct: 357 SLISSYGIHGFGRKAIQIFKEMI--DQGLSPSPISFVSVLGACSHAGLVEEGKVLFESMV 414
Query: 128 RRGLDSILPVI---SALVTMYARCGNLDWGRRVFDRM 27
R I P + + +V + R LD ++ D M
Sbjct: 415 RG--HKIFPSVEHYACMVDLLGRANRLDEAAKIIDDM 449
Score = 59.7 bits (143), Expect = 2e-06
Identities = 36/173 (20%), Positives = 83/173 (47%), Gaps = 1/173 (0%)
Frame = -1
Query: 842 PTQHTYELLILSCIRQNSLSDGLNVQRHLIDDGLDQDPFLATKLINMFSELDSIDNARKV 663
P T ++ +C +L G + +++ GLD + + L+ +++ +++ +V
Sbjct: 284 PNSVTMVSVLQACAALAALEQGKLMHGYILRRGLDSILPVVSALVTVYARCGNLELGHRV 343
Query: 662 FDKTRNRTVYVWNALFRALTLAGQGKETLHLYRMMNHTGIPSDRFTYTYVLKACVASETL 483
F++ R V WN+L + + G G++ + +++ M G+ ++ VL AC +
Sbjct: 344 FERMEKRDVVSWNSLISSYGIHGFGRKAIQIFKEMIDQGLSPSPISFVSVLGAC----SH 399
Query: 482 TSLLQKGKEIHAHILR-HGFEGHVHIMTTLVDMYARFGYVLYASSVFDEMPVK 327
L+++GK + ++R H V +VD+ R + A+ + D+M ++
Sbjct: 400 AGLVEEGKVLFESMVRGHKIFPSVEHYACMVDLLGRANRLDEAAKIIDDMRIE 452
>ref|XP_002313416.2| chlororespiratory reduction 2 family protein [Populus trichocarpa]
gi|550331005|gb|EEE87371.2| chlororespiratory reduction 2
family protein [Populus trichocarpa]
Length = 650
Score = 503 bits (1294), Expect = e-140
Identities = 251/327 (76%), Positives = 284/327 (86%), Gaps = 1/327 (0%)
Frame = -1
Query: 980 RTSLKQLGCSVALR-TTTTTDNNHLIQSLCRRGNLKRAFQVLSDEPDPTQHTYELLILSC 804
R SLK CS+ L T +T DNN LIQSLC++GNL +A ++LS EP+P QHTYELLILSC
Sbjct: 21 RPSLKPPICSITLNPTASTADNNKLIQSLCKQGNLTQALELLSLEPNPAQHTYELLILSC 80
Query: 803 IRQNSLSDGLNVQRHLIDDGLDQDPFLATKLINMFSELDSIDNARKVFDKTRNRTVYVWN 624
QNSL D V RHL+++G DQDPFLATKLINM+S DSIDNARKVFDKTRNRT+YV+N
Sbjct: 81 THQNSLLDAQRVHRHLLENGFDQDPFLATKLINMYSFFDSIDNARKVFDKTRNRTIYVYN 140
Query: 623 ALFRALTLAGQGKETLHLYRMMNHTGIPSDRFTYTYVLKACVASETLTSLLQKGKEIHAH 444
ALFRAL+LAG G+E L++YR MN GIPSDRFTYTYVLKACVASE SLL KG+EIHAH
Sbjct: 141 ALFRALSLAGHGEEVLNMYRRMNSIGIPSDRFTYTYVLKACVASECFVSLLNKGREIHAH 200
Query: 443 ILRHGFEGHVHIMTTLVDMYARFGYVLYASSVFDEMPVKNVVSWSAMIACYAKNGKPFEA 264
ILRHG++G+VHIMTTLVDMYA+FG V AS VF++MPVKNVVSWSAMIACYAKNGK FEA
Sbjct: 201 ILRHGYDGYVHIMTTLVDMYAKFGCVSNASCVFNQMPVKNVVSWSAMIACYAKNGKAFEA 260
Query: 263 LELFREMMLETQDSVPNSVTMVSVLQACAALSALEQGKLIHAYILRRGLDSILPVISALV 84
LELFRE+MLETQD PNSVTMVSVLQACAAL+ALEQG+LIH YILR+GLDSILPVISALV
Sbjct: 261 LELFRELMLETQDLCPNSVTMVSVLQACAALAALEQGRLIHGYILRKGLDSILPVISALV 320
Query: 83 TMYARCGNLDWGRRVFDRMEKRDVVSW 3
TMYARCG L+ G+RVFD+M+KRDVVSW
Sbjct: 321 TMYARCGKLELGQRVFDQMDKRDVVSW 347
Score = 123 bits (308), Expect = 2e-25
Identities = 75/275 (27%), Positives = 144/275 (52%), Gaps = 7/275 (2%)
Frame = -1
Query: 830 TYELLILSCIRQNS----LSDGLNVQRHLIDDGLDQDPFLATKLINMFSELDSIDNARKV 663
TY ++ +C+ L+ G + H++ G D + T L++M+++ + NA V
Sbjct: 173 TYTYVLKACVASECFVSLLNKGREIHAHILRHGYDGYVHIMTTLVDMYAKFGCVSNASCV 232
Query: 662 FDKTRNRTVYVWNALFRALTLAGQGKETLHLYR--MMNHTGIPSDRFTYTYVLKACVASE 489
F++ + V W+A+ G+ E L L+R M+ + + T VL+AC A
Sbjct: 233 FNQMPVKNVVSWSAMIACYAKNGKAFEALELFRELMLETQDLCPNSVTMVSVLQACAA-- 290
Query: 488 TLTSLLQKGKEIHAHILRHGFEGHVHIMTTLVDMYARFGYVLYASSVFDEMPVKNVVSWS 309
+ L++G+ IH +ILR G + + +++ LV MYAR G + VFD+M ++VVSW+
Sbjct: 291 --LAALEQGRLIHGYILRKGLDSILPVISALVTMYARCGKLELGQRVFDQMDKRDVVSWN 348
Query: 308 AMIACYAKNGKPFEALELFREMMLETQDSVPNSVTMVSVLQACAALSALEQGKLIHAYI- 132
++I+ Y +G +A+ +F EM + P+ V+ VSVL AC+ +++GK++ + +
Sbjct: 349 SLISSYGVHGFGKKAIGIFEEMTYNGVE--PSPVSFVSVLGACSHAGLVDEGKMLFSSMH 406
Query: 131 LRRGLDSILPVISALVTMYARCGNLDWGRRVFDRM 27
+ G+ + + +V + R L+ ++ + M
Sbjct: 407 VAHGICPSVEHYACMVDLLGRANRLEEAAKIIENM 441
Score = 62.8 bits (151), Expect = 3e-07
Identities = 38/173 (21%), Positives = 82/173 (47%), Gaps = 1/173 (0%)
Frame = -1
Query: 842 PTQHTYELLILSCIRQNSLSDGLNVQRHLIDDGLDQDPFLATKLINMFSELDSIDNARKV 663
P T ++ +C +L G + +++ GLD + + L+ M++ ++ ++V
Sbjct: 276 PNSVTMVSVLQACAALAALEQGRLIHGYILRKGLDSILPVISALVTMYARCGKLELGQRV 335
Query: 662 FDKTRNRTVYVWNALFRALTLAGQGKETLHLYRMMNHTGIPSDRFTYTYVLKACVASETL 483
FD+ R V WN+L + + G GK+ + ++ M + G+ ++ VL AC +
Sbjct: 336 FDQMDKRDVVSWNSLISSYGVHGFGKKAIGIFEEMTYNGVEPSPVSFVSVLGAC----SH 391
Query: 482 TSLLQKGKEIHAHI-LRHGFEGHVHIMTTLVDMYARFGYVLYASSVFDEMPVK 327
L+ +GK + + + + HG V +VD+ R + A+ + + M ++
Sbjct: 392 AGLVDEGKMLFSSMHVAHGICPSVEHYACMVDLLGRANRLEEAAKIIENMRIE 444
>ref|XP_007016304.1| Tetratricopeptide repeat (TPR)-like superfamily protein [Theobroma
cacao] gi|508786667|gb|EOY33923.1| Tetratricopeptide
repeat (TPR)-like superfamily protein [Theobroma cacao]
Length = 651
Score = 492 bits (1267), Expect = e-136
Identities = 247/329 (75%), Positives = 282/329 (85%), Gaps = 3/329 (0%)
Frame = -1
Query: 980 RTSLKQLGCSVALR---TTTTTDNNHLIQSLCRRGNLKRAFQVLSDEPDPTQHTYELLIL 810
RTS K S+ L +T+ +NN LIQSLC+ GNLK+AF++LS EP+P+Q TYELLIL
Sbjct: 20 RTSPKLPSSSLTLNPSISTSNLNNNQLIQSLCKEGNLKQAFKLLSQEPNPSQRTYELLIL 79
Query: 809 SCIRQNSLSDGLNVQRHLIDDGLDQDPFLATKLINMFSELDSIDNARKVFDKTRNRTVYV 630
SC QNSLS ++ H+ +G DQDPFL TKLI+M+S LDS+D+ARK+FDKTR RT++V
Sbjct: 80 SCAHQNSLSLAQSLHSHISQNGFDQDPFLVTKLISMYSALDSLDDARKLFDKTRKRTIFV 139
Query: 629 WNALFRALTLAGQGKETLHLYRMMNHTGIPSDRFTYTYVLKACVASETLTSLLQKGKEIH 450
WNALFRALTLAG G+E L LYR MN TGIPSDRFTYTYVLKACVASE L SLL+KGKEIH
Sbjct: 140 WNALFRALTLAGFGEEVLGLYRQMNRTGIPSDRFTYTYVLKACVASECLVSLLKKGKEIH 199
Query: 449 AHILRHGFEGHVHIMTTLVDMYARFGYVLYASSVFDEMPVKNVVSWSAMIACYAKNGKPF 270
A+ILRHG+E HVHIMTTLVDMYARFG V AS VF EMPV+NVVSWSAMIACYAKNGK F
Sbjct: 200 AYILRHGYEAHVHIMTTLVDMYARFGCVSCASFVFGEMPVRNVVSWSAMIACYAKNGKSF 259
Query: 269 EALELFREMMLETQDSVPNSVTMVSVLQACAALSALEQGKLIHAYILRRGLDSILPVISA 90
EALELFREMM+ET DS PNSVTMVSVLQACAAL+ALEQGKLIHAYILRRGLDS+LPVISA
Sbjct: 260 EALELFREMMVETHDSFPNSVTMVSVLQACAALAALEQGKLIHAYILRRGLDSVLPVISA 319
Query: 89 LVTMYARCGNLDWGRRVFDRMEKRDVVSW 3
L+TMY+RCG L+ G+R+FD+MEKRDVVSW
Sbjct: 320 LITMYSRCGKLELGQRIFDQMEKRDVVSW 348
Score = 127 bits (319), Expect = 9e-27
Identities = 81/276 (29%), Positives = 142/276 (51%), Gaps = 8/276 (2%)
Frame = -1
Query: 830 TYELLILSCIRQNSL----SDGLNVQRHLIDDGLDQDPFLATKLINMFSELDSIDNARKV 663
TY ++ +C+ L G + +++ G + + T L++M++ + A V
Sbjct: 174 TYTYVLKACVASECLVSLLKKGKEIHAYILRHGYEAHVHIMTTLVDMYARFGCVSCASFV 233
Query: 662 FDKTRNRTVYVWNALFRALTLAGQGKETLHLYRMM---NHTGIPSDRFTYTYVLKACVAS 492
F + R V W+A+ G+ E L L+R M H P+ T VL+AC A
Sbjct: 234 FGEMPVRNVVSWSAMIACYAKNGKSFEALELFREMMVETHDSFPNS-VTMVSVLQACAA- 291
Query: 491 ETLTSLLQKGKEIHAHILRHGFEGHVHIMTTLVDMYARFGYVLYASSVFDEMPVKNVVSW 312
+ L++GK IHA+ILR G + + +++ L+ MY+R G + +FD+M ++VVSW
Sbjct: 292 ---LAALEQGKLIHAYILRRGLDSVLPVISALITMYSRCGKLELGQRIFDQMEKRDVVSW 348
Query: 311 SAMIACYAKNGKPFEALELFREMMLETQDSVPNSVTMVSVLQACAALSALEQGK-LIHAY 135
+++I+ YA +G +A+++F+EM+ Q P+ VT VSVL AC+ +E+GK L +
Sbjct: 349 NSLISSYAVHGFGKKAIQIFQEMI--HQGVSPSPVTFVSVLGACSHAGLVEEGKWLFDSM 406
Query: 134 ILRRGLDSILPVISALVTMYARCGNLDWGRRVFDRM 27
G+ + + +V + R L+ R+ D M
Sbjct: 407 HKEHGIYPSVEHYACMVDLLGRANRLEEAARIIDEM 442
Score = 73.2 bits (178), Expect = 2e-10
Identities = 46/186 (24%), Positives = 89/186 (47%), Gaps = 1/186 (0%)
Frame = -1
Query: 881 LKRAFQVLSDEPDPTQHTYELLILSCIRQNSLSDGLNVQRHLIDDGLDQDPFLATKLINM 702
L R V + + P T ++ +C +L G + +++ GLD + + LI M
Sbjct: 264 LFREMMVETHDSFPNSVTMVSVLQACAALAALEQGKLIHAYILRRGLDSVLPVISALITM 323
Query: 701 FSELDSIDNARKVFDKTRNRTVYVWNALFRALTLAGQGKETLHLYRMMNHTGIPSDRFTY 522
+S ++ +++FD+ R V WN+L + + G GK+ + +++ M H G+ T+
Sbjct: 324 YSRCGKLELGQRIFDQMEKRDVVSWNSLISSYAVHGFGKKAIQIFQEMIHQGVSPSPVTF 383
Query: 521 TYVLKACVASETLTSLLQKGKEIHAHILR-HGFEGHVHIMTTLVDMYARFGYVLYASSVF 345
VL AC + L+++GK + + + HG V +VD+ R + A+ +
Sbjct: 384 VSVLGAC----SHAGLVEEGKWLFDSMHKEHGIYPSVEHYACMVDLLGRANRLEEAARII 439
Query: 344 DEMPVK 327
DEM ++
Sbjct: 440 DEMRIE 445
>ref|XP_004145327.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
gi|449474033|ref|XP_004154055.1| PREDICTED:
pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
gi|449510921|ref|XP_004163811.1| PREDICTED:
pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
Length = 649
Score = 491 bits (1264), Expect = e-136
Identities = 242/312 (77%), Positives = 271/312 (86%)
Frame = -1
Query: 938 TTTTTDNNHLIQSLCRRGNLKRAFQVLSDEPDPTQHTYELLILSCIRQNSLSDGLNVQRH 759
T ++NNHLIQSLC++GNLK+A +LS E +PTQ T ELLILS R+NSLSD L+V +
Sbjct: 35 TPPNSNNNHLIQSLCKQGNLKQALYLLSHESNPTQQTCELLILSAARRNSLSDALDVHQL 94
Query: 758 LIDDGLDQDPFLATKLINMFSELDSIDNARKVFDKTRNRTVYVWNALFRALTLAGQGKET 579
L+D G DQDPFLATKLINMFSELD++DNARKVFDKTR RT+YVWNALFRAL LAG+G +
Sbjct: 95 LVDGGFDQDPFLATKLINMFSELDTVDNARKVFDKTRKRTIYVWNALFRALALAGRGNDV 154
Query: 578 LHLYRMMNHTGIPSDRFTYTYVLKACVASETLTSLLQKGKEIHAHILRHGFEGHVHIMTT 399
L LY MN G+ SDRFTYTY+LKACVASE L S LQKGKEIHAHILRHG+ HVH+MTT
Sbjct: 155 LELYPRMNMMGVSSDRFTYTYLLKACVASECLVSFLQKGKEIHAHILRHGYGAHVHVMTT 214
Query: 398 LVDMYARFGYVLYASSVFDEMPVKNVVSWSAMIACYAKNGKPFEALELFREMMLETQDSV 219
L+DMYARFG V YAS+VFDEMPVKNVVSWSAMIACYAKNGKP+EALELFREMML T DSV
Sbjct: 215 LMDMYARFGCVSYASAVFDEMPVKNVVSWSAMIACYAKNGKPYEALELFREMMLNTHDSV 274
Query: 218 PNSVTMVSVLQACAALSALEQGKLIHAYILRRGLDSILPVISALVTMYARCGNLDWGRRV 39
PNSVTMVSVLQACAA +ALEQGKLIHAYILRRGLDSILPVISAL+TMYARCG L+ G+ +
Sbjct: 275 PNSVTMVSVLQACAAFAALEQGKLIHAYILRRGLDSILPVISALITMYARCGKLESGQLI 334
Query: 38 FDRMEKRDVVSW 3
FDRM K+DVV W
Sbjct: 335 FDRMHKKDVVLW 346
Score = 124 bits (312), Expect = 6e-26
Identities = 77/274 (28%), Positives = 138/274 (50%), Gaps = 8/274 (2%)
Frame = -1
Query: 830 TYELLILSCIRQNSL----SDGLNVQRHLIDDGLDQDPFLATKLINMFSELDSIDNARKV 663
TY L+ +C+ L G + H++ G + T L++M++ + A V
Sbjct: 172 TYTYLLKACVASECLVSFLQKGKEIHAHILRHGYGAHVHVMTTLMDMYARFGCVSYASAV 231
Query: 662 FDKTRNRTVYVWNALFRALTLAGQGKETLHLYRMM---NHTGIPSDRFTYTYVLKACVAS 492
FD+ + V W+A+ G+ E L L+R M H +P+ T VL+AC A
Sbjct: 232 FDEMPVKNVVSWSAMIACYAKNGKPYEALELFREMMLNTHDSVPNS-VTMVSVLQACAAF 290
Query: 491 ETLTSLLQKGKEIHAHILRHGFEGHVHIMTTLVDMYARFGYVLYASSVFDEMPVKNVVSW 312
+ L++GK IHA+ILR G + + +++ L+ MYAR G + +FD M K+VV W
Sbjct: 291 ----AALEQGKLIHAYILRRGLDSILPVISALITMYARCGKLESGQLIFDRMHKKDVVLW 346
Query: 311 SAMIACYAKNGKPFEALELFREMMLETQDSVPNSVTMVSVLQACAALSALEQG-KLIHAY 135
+++I+ Y +G +A+++F EM+ P+ ++ +SVL AC+ +E+G KL +
Sbjct: 347 NSLISSYGLHGYGRKAIKIFEEMI--DHGFSPSHISFISVLGACSHTGLVEEGKKLFESM 404
Query: 134 ILRRGLDSILPVISALVTMYARCGNLDWGRRVFD 33
+ G+ + + +V + R LD ++ +
Sbjct: 405 VKEHGIQPSVEHYACMVDLLGRANRLDEAAKIIE 438
Score = 67.4 bits (163), Expect = 1e-08
Identities = 39/186 (20%), Positives = 91/186 (48%), Gaps = 1/186 (0%)
Frame = -1
Query: 881 LKRAFQVLSDEPDPTQHTYELLILSCIRQNSLSDGLNVQRHLIDDGLDQDPFLATKLINM 702
L R + + + P T ++ +C +L G + +++ GLD + + LI M
Sbjct: 262 LFREMMLNTHDSVPNSVTMVSVLQACAAFAALEQGKLIHAYILRRGLDSILPVISALITM 321
Query: 701 FSELDSIDNARKVFDKTRNRTVYVWNALFRALTLAGQGKETLHLYRMMNHTGIPSDRFTY 522
++ +++ + +FD+ + V +WN+L + L G G++ + ++ M G ++
Sbjct: 322 YARCGKLESGQLIFDRMHKKDVVLWNSLISSYGLHGYGRKAIKIFEEMIDHGFSPSHISF 381
Query: 521 TYVLKACVASETLTSLLQKGKEIHAHILR-HGFEGHVHIMTTLVDMYARFGYVLYASSVF 345
VL AC + T L+++GK++ +++ HG + V +VD+ R + A+ +
Sbjct: 382 ISVLGAC----SHTGLVEEGKKLFESMVKEHGIQPSVEHYACMVDLLGRANRLDEAAKII 437
Query: 344 DEMPVK 327
+++ ++
Sbjct: 438 EDLRIE 443
>ref|XP_002520500.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223540342|gb|EEF41913.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 414
Score = 486 bits (1252), Expect = e-135
Identities = 244/319 (76%), Positives = 270/319 (84%), Gaps = 1/319 (0%)
Frame = -1
Query: 956 CSVALRTTTTTDN-NHLIQSLCRRGNLKRAFQVLSDEPDPTQHTYELLILSCIRQNSLSD 780
C V L T T N N LIQSLC++GNLK+A +L +EPDP QHTYELL+LSC QNS D
Sbjct: 30 CFVNLNPTIPTANSNKLIQSLCKQGNLKQALNLLCNEPDPAQHTYELLLLSCTHQNSFLD 89
Query: 779 GLNVQRHLIDDGLDQDPFLATKLINMFSELDSIDNARKVFDKTRNRTVYVWNALFRALTL 600
V +HL+D+G DQDPFLATKLINM+S SIDNARKVFDKTR+RT+YV+NALFRALTL
Sbjct: 90 AQFVHQHLLDNGFDQDPFLATKLINMYSSFGSIDNARKVFDKTRSRTLYVYNALFRALTL 149
Query: 599 AGQGKETLHLYRMMNHTGIPSDRFTYTYVLKACVASETLTSLLQKGKEIHAHILRHGFEG 420
G G+E L LYR MN G+PSDRFTYTYVLKACVAS +L SLL+KGKEIHA ILR G+E
Sbjct: 150 VGNGEEVLRLYRRMNSIGMPSDRFTYTYVLKACVASNSLLSLLKKGKEIHAQILRRGYEA 209
Query: 419 HVHIMTTLVDMYARFGYVLYASSVFDEMPVKNVVSWSAMIACYAKNGKPFEALELFREMM 240
HVHIMTTLVDMYARFGYV YAS VF EM VKNVVSWSAMIACYAKNG+PFEALELFREMM
Sbjct: 210 HVHIMTTLVDMYARFGYVSYASCVFSEMSVKNVVSWSAMIACYAKNGRPFEALELFREMM 269
Query: 239 LETQDSVPNSVTMVSVLQACAALSALEQGKLIHAYILRRGLDSILPVISALVTMYARCGN 60
LET+D PNSVTMVSVLQACAAL+ALEQGKL+H YILRRGLDSILPVIS+LVTMYARCG
Sbjct: 270 LETKDMCPNSVTMVSVLQACAALAALEQGKLLHGYILRRGLDSILPVISSLVTMYARCGK 329
Query: 59 LDWGRRVFDRMEKRDVVSW 3
L + VFD+M+KRDVVSW
Sbjct: 330 LQLAQHVFDQMDKRDVVSW 348
Score = 120 bits (302), Expect = 8e-25
Identities = 80/277 (28%), Positives = 149/277 (53%), Gaps = 11/277 (3%)
Frame = -1
Query: 941 RTTTTTDNNHLIQSLCRRGN---LKRAFQVLSDEPDPTQH-TYELLILSCIRQNSL---- 786
R+ T N L ++L GN + R ++ ++ P+ TY ++ +C+ NSL
Sbjct: 133 RSRTLYVYNALFRALTLVGNGEEVLRLYRRMNSIGMPSDRFTYTYVLKACVASNSLLSLL 192
Query: 785 SDGLNVQRHLIDDGLDQDPFLATKLINMFSELDSIDNARKVFDKTRNRTVYVWNALFRAL 606
G + ++ G + + T L++M++ + A VF + + V W+A+
Sbjct: 193 KKGKEIHAQILRRGYEAHVHIMTTLVDMYARFGYVSYASCVFSEMSVKNVVSWSAMIACY 252
Query: 605 TLAGQGKETLHLYR--MMNHTGIPSDRFTYTYVLKACVASETLTSLLQKGKEIHAHILRH 432
G+ E L L+R M+ + + T VL+AC A + L++GK +H +ILR
Sbjct: 253 AKNGRPFEALELFREMMLETKDMCPNSVTMVSVLQACAA----LAALEQGKLLHGYILRR 308
Query: 431 GFEGHVHIMTTLVDMYARFGYVLYASSVFDEMPVKNVVSWSAMIACYAKNGKPFEALELF 252
G + + ++++LV MYAR G + A VFD+M ++VVSW+++I+ Y +G +A+++F
Sbjct: 309 GLDSILPVISSLVTMYARCGKLQLAQHVFDQMDKRDVVSWNSLISSYGVHGFGKKAIQIF 368
Query: 251 REMMLETQDSV-PNSVTMVSVLQACAALSALEQGKLI 144
++M T++ V P+ ++ VSVL AC+ +E+GK++
Sbjct: 369 KDM---TRNGVFPSPISFVSVLGACSHAGLVEEGKIL 402
>gb|EXC10733.1| hypothetical protein L484_025317 [Morus notabilis]
Length = 659
Score = 481 bits (1237), Expect = e-133
Identities = 242/313 (77%), Positives = 269/313 (85%), Gaps = 1/313 (0%)
Frame = -1
Query: 938 TTTTTDNNHLIQSLCRRGNLKRAFQVLSDEPDPTQHTYELLILSCIRQNSLSDGLNVQRH 759
T T D N LIQSLC++GNL++A ++L EP+PTQHTYELLILSCIR SLS GL V RH
Sbjct: 44 TKDTNDKNKLIQSLCKQGNLRQALKLLPHEPNPTQHTYELLILSCIRHESLSCGLQVHRH 103
Query: 758 LIDDGLDQDPFLATKLINMFSELDSIDNARKVFDKTRNRTVYVWNALFRALTLAGQGKET 579
L+DDG QDPFLATKLINM+SELDSID+ARKVFDKTRNRT+YVWNA+FRAL LAG G +
Sbjct: 104 LVDDGSGQDPFLATKLINMYSELDSIDDARKVFDKTRNRTIYVWNAVFRALALAGHGMDV 163
Query: 578 LHLYRMMN-HTGIPSDRFTYTYVLKACVASETLTSLLQKGKEIHAHILRHGFEGHVHIMT 402
LY MN +GI SDRFTYTYVLKACVASE+ SLL+KGKEIHAH+LR GFE VHIMT
Sbjct: 164 FELYCRMNWSSGIESDRFTYTYVLKACVASESSISLLRKGKEIHAHVLRRGFEACVHIMT 223
Query: 401 TLVDMYARFGYVLYASSVFDEMPVKNVVSWSAMIACYAKNGKPFEALELFREMMLETQDS 222
TLVDMYARFG VL AS VFDEMP+KNVVSWSAMIACY KN +PFEALELF EM LE +DS
Sbjct: 224 TLVDMYARFGCVLNASCVFDEMPMKNVVSWSAMIACYVKNERPFEALELFWEMTLENRDS 283
Query: 221 VPNSVTMVSVLQACAALSALEQGKLIHAYILRRGLDSILPVISALVTMYARCGNLDWGRR 42
+PNSVTMVSVLQACAA+ ALEQGKLIH YILRRGLDSILPV+S LVTMYARCG L+ G+R
Sbjct: 284 LPNSVTMVSVLQACAAIVALEQGKLIHGYILRRGLDSILPVMSTLVTMYARCGKLEIGQR 343
Query: 41 VFDRMEKRDVVSW 3
VFD+M+KRDVVSW
Sbjct: 344 VFDQMDKRDVVSW 356
Score = 127 bits (318), Expect = 1e-26
Identities = 82/276 (29%), Positives = 143/276 (51%), Gaps = 8/276 (2%)
Frame = -1
Query: 830 TYELLILSCIRQNS----LSDGLNVQRHLIDDGLDQDPFLATKLINMFSELDSIDNARKV 663
TY ++ +C+ S L G + H++ G + + T L++M++ + NA V
Sbjct: 182 TYTYVLKACVASESSISLLRKGKEIHAHVLRRGFEACVHIMTTLVDMYARFGCVLNASCV 241
Query: 662 FDKTRNRTVYVWNALFRALTLAGQGKETLHLYRMM---NHTGIPSDRFTYTYVLKACVAS 492
FD+ + V W+A+ + E L L+ M N +P+ T VL+AC A
Sbjct: 242 FDEMPMKNVVSWSAMIACYVKNERPFEALELFWEMTLENRDSLPNS-VTMVSVLQACAAI 300
Query: 491 ETLTSLLQKGKEIHAHILRHGFEGHVHIMTTLVDMYARFGYVLYASSVFDEMPVKNVVSW 312
L ++GK IH +ILR G + + +M+TLV MYAR G + VFD+M ++VVSW
Sbjct: 301 VAL----EQGKLIHGYILRRGLDSILPVMSTLVTMYARCGKLEIGQRVFDQMDKRDVVSW 356
Query: 311 SAMIACYAKNGKPFEALELFREMMLETQDSVPNSVTMVSVLQACAALSALEQGKLIHAYI 132
+++I+ Y +G +A+++F++M+ + PN +T +SVL AC+ + +GK++ +
Sbjct: 357 NSLISSYGIHGYGRKAIQIFKDMI--SNGVSPNEITFISVLGACSHAGLVVEGKMLFDSM 414
Query: 131 LR-RGLDSILPVISALVTMYARCGNLDWGRRVFDRM 27
R G+ + + LV + R LD +V + M
Sbjct: 415 CREHGMYPSMEHYACLVDLLGRANRLDEAAKVVEDM 450
Score = 63.9 bits (154), Expect = 1e-07
Identities = 42/183 (22%), Positives = 87/183 (47%), Gaps = 2/183 (1%)
Frame = -1
Query: 842 PTQHTYELLILSCIRQNSLSDGLNVQRHLIDDGLDQDPFLATKLINMFSELDSIDNARKV 663
P T ++ +C +L G + +++ GLD + + L+ M++ ++ ++V
Sbjct: 285 PNSVTMVSVLQACAAIVALEQGKLIHGYILRRGLDSILPVMSTLVTMYARCGKLEIGQRV 344
Query: 662 FDKTRNRTVYVWNALFRALTLAGQGKETLHLYRMMNHTGIPSDRFTYTYVLKACVASETL 483
FD+ R V WN+L + + G G++ + +++ M G+ + T+ VL AC +
Sbjct: 345 FDQMDKRDVVSWNSLISSYGIHGYGRKAIQIFKDMISNGVSPNEITFISVLGAC----SH 400
Query: 482 TSLLQKGKEIHAHILR-HGFEGHVHIMTTLVDMYARFGYVLYASSVFDEMPVK-NVVSWS 309
L+ +GK + + R HG + LVD+ R + A+ V ++M ++ W
Sbjct: 401 AGLVVEGKMLFDSMCREHGMYPSMEHYACLVDLLGRANRLDEAAKVVEDMRIEPGSKVWG 460
Query: 308 AMI 300
A++
Sbjct: 461 ALL 463
>ref|XP_006427693.1| hypothetical protein CICLE_v10025096mg [Citrus clementina]
gi|557529683|gb|ESR40933.1| hypothetical protein
CICLE_v10025096mg [Citrus clementina]
Length = 662
Score = 469 bits (1206), Expect = e-129
Identities = 236/326 (72%), Positives = 269/326 (82%), Gaps = 8/326 (2%)
Frame = -1
Query: 956 CSVALRTTTTT------DNNHLIQSLCRRGNLKRAFQVLSDEPDPTQHTYELLILSCIRQ 795
C V+L ++TT + N LIQSLC++GNLK+A VLS EP+PTQHTYELL+LSC
Sbjct: 34 CCVSLNSSTTPTSLSSRNKNELIQSLCKQGNLKQALDVLSSEPNPTQHTYELLLLSCAHH 93
Query: 794 NSLSDGLNVQRHLIDDGLDQDPFLATKLINMFSELDSIDNARKVFDKTRNRTVYVWNALF 615
NSLSD LNV HL D+G DQDPFL TKLIN++S DS+D+AR VFDKTR RT+YVWNALF
Sbjct: 94 NSLSDALNVHCHLTDNGFDQDPFLVTKLINVYSHFDSVDDARHVFDKTRRRTIYVWNALF 153
Query: 614 RALTLAGQGKETLHLYRMMNHTG--IPSDRFTYTYVLKACVASETLTSLLQKGKEIHAHI 441
RALTLAG+G+E L LYR MN TG I SDRFTYTYVLKACVAS SLL+ GKEIHA +
Sbjct: 154 RALTLAGRGEEVLELYRRMNGTGTGIRSDRFTYTYVLKACVASSCGFSLLKHGKEIHASV 213
Query: 440 LRHGFEGHVHIMTTLVDMYARFGYVLYASSVFDEMPVKNVVSWSAMIACYAKNGKPFEAL 261
LRHG+ G VHIMTTL+DMYARFG V+YA VF +M VKNVVSWSAMIACYA+NG FEAL
Sbjct: 214 LRHGYNGIVHIMTTLIDMYARFGCVMYAGFVFSQMAVKNVVSWSAMIACYARNGMAFEAL 273
Query: 260 ELFREMMLETQDSVPNSVTMVSVLQACAALSALEQGKLIHAYILRRGLDSILPVISALVT 81
ELFREM++E+ D PNSVTMVSVLQACAAL+ALEQGK+IH YILRRGLDSILPV+SALVT
Sbjct: 274 ELFREMIMESHDLCPNSVTMVSVLQACAALAALEQGKMIHGYILRRGLDSILPVVSALVT 333
Query: 80 MYARCGNLDWGRRVFDRMEKRDVVSW 3
MYARCG L+ G+ VFD M+KRDVVSW
Sbjct: 334 MYARCGKLELGQCVFDHMDKRDVVSW 359
Score = 112 bits (281), Expect = 2e-22
Identities = 71/236 (30%), Positives = 124/236 (52%), Gaps = 7/236 (2%)
Frame = -1
Query: 830 TYELLILSCIRQNS----LSDGLNVQRHLIDDGLDQDPFLATKLINMFSELDSIDNARKV 663
TY ++ +C+ + L G + ++ G + + T LI+M++ + A V
Sbjct: 185 TYTYVLKACVASSCGFSLLKHGKEIHASVLRHGYNGIVHIMTTLIDMYARFGCVMYAGFV 244
Query: 662 FDKTRNRTVYVWNALFRALTLAGQGKETLHLYRMM---NHTGIPSDRFTYTYVLKACVAS 492
F + + V W+A+ G E L L+R M +H P+ T VL+AC A
Sbjct: 245 FSQMAVKNVVSWSAMIACYARNGMAFEALELFREMIMESHDLCPNS-VTMVSVLQACAA- 302
Query: 491 ETLTSLLQKGKEIHAHILRHGFEGHVHIMTTLVDMYARFGYVLYASSVFDEMPVKNVVSW 312
+ L++GK IH +ILR G + + +++ LV MYAR G + VFD M ++VVSW
Sbjct: 303 ---LAALEQGKMIHGYILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSW 359
Query: 311 SAMIACYAKNGKPFEALELFREMMLETQDSVPNSVTMVSVLQACAALSALEQGKLI 144
+++I+ Y +G +A+++F+EM+ P+ ++ VSVL AC+ +E+GK++
Sbjct: 360 NSLISSYGVHGYGGKAIQIFKEMIYHGVS--PSPISFVSVLGACSHAGLVEEGKML 413
>ref|XP_006493448.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Citrus sinensis]
Length = 662
Score = 467 bits (1202), Expect = e-129
Identities = 235/326 (72%), Positives = 269/326 (82%), Gaps = 8/326 (2%)
Frame = -1
Query: 956 CSVALRTTTTT------DNNHLIQSLCRRGNLKRAFQVLSDEPDPTQHTYELLILSCIRQ 795
C V+L ++TT + N LIQSLC++GNL++A VLS EP+PTQHTYELL+LSC
Sbjct: 34 CCVSLNSSTTPTSLSSRNKNELIQSLCKQGNLRQALDVLSIEPNPTQHTYELLLLSCTHH 93
Query: 794 NSLSDGLNVQRHLIDDGLDQDPFLATKLINMFSELDSIDNARKVFDKTRNRTVYVWNALF 615
NSLSD LNV HL D+G DQDPFL TKLIN++S DS+D+AR VFDKTR RT+YVWNALF
Sbjct: 94 NSLSDALNVHSHLTDNGFDQDPFLVTKLINVYSHFDSVDDARHVFDKTRRRTIYVWNALF 153
Query: 614 RALTLAGQGKETLHLYRMMNHTG--IPSDRFTYTYVLKACVASETLTSLLQKGKEIHAHI 441
RALTLAG+G+E L LYR MN TG I SDRFTYTYVLKACVAS SLL+ GKEIHA +
Sbjct: 154 RALTLAGRGEEVLELYRRMNGTGTGIRSDRFTYTYVLKACVASSCGFSLLKHGKEIHASV 213
Query: 440 LRHGFEGHVHIMTTLVDMYARFGYVLYASSVFDEMPVKNVVSWSAMIACYAKNGKPFEAL 261
LRHG+ G VHIMTTL+DMYARFG V+YA VF +M VKNVVSWSAMIACYA+NG FEAL
Sbjct: 214 LRHGYNGIVHIMTTLIDMYARFGCVMYAGFVFSQMAVKNVVSWSAMIACYARNGMAFEAL 273
Query: 260 ELFREMMLETQDSVPNSVTMVSVLQACAALSALEQGKLIHAYILRRGLDSILPVISALVT 81
ELFREM++E+ D PNSVTMVSVLQACAAL+ALEQGK+IH YILRRGLDSILPV+SALVT
Sbjct: 274 ELFREMIMESHDLCPNSVTMVSVLQACAALAALEQGKMIHGYILRRGLDSILPVVSALVT 333
Query: 80 MYARCGNLDWGRRVFDRMEKRDVVSW 3
MYARCG L+ G+ VFD M+KRDVVSW
Sbjct: 334 MYARCGKLELGQCVFDHMDKRDVVSW 359
Score = 113 bits (282), Expect = 2e-22
Identities = 76/276 (27%), Positives = 140/276 (50%), Gaps = 10/276 (3%)
Frame = -1
Query: 830 TYELLILSCIRQNS----LSDGLNVQRHLIDDGLDQDPFLATKLINMFSELDSIDNARKV 663
TY ++ +C+ + L G + ++ G + + T LI+M++ + A V
Sbjct: 185 TYTYVLKACVASSCGFSLLKHGKEIHASVLRHGYNGIVHIMTTLIDMYARFGCVMYAGFV 244
Query: 662 FDKTRNRTVYVWNALFRALTLAGQGKETLHLYRMM---NHTGIPSDRFTYTYVLKACVAS 492
F + + V W+A+ G E L L+R M +H P+ T VL+AC A
Sbjct: 245 FSQMAVKNVVSWSAMIACYARNGMAFEALELFREMIMESHDLCPNS-VTMVSVLQACAA- 302
Query: 491 ETLTSLLQKGKEIHAHILRHGFEGHVHIMTTLVDMYARFGYVLYASSVFDEMPVKNVVSW 312
+ L++GK IH +ILR G + + +++ LV MYAR G + VFD M ++VVSW
Sbjct: 303 ---LAALEQGKMIHGYILRRGLDSILPVVSALVTMYARCGKLELGQCVFDHMDKRDVVSW 359
Query: 311 SAMIACYAKNGKPFEALELFREMMLETQDSVPNSVTMVSVLQACAALSALEQGKLIHAYI 132
+++I+ Y +G +A+++F+EM+ P+ ++ VSVL AC+ +E+GK++ +
Sbjct: 360 NSLISSYGVHGYGGKAIQIFKEMIYHGVS--PSPISFVSVLGACSHAGLVEEGKMLFESM 417
Query: 131 LRRGLDSILPVI---SALVTMYARCGNLDWGRRVFD 33
+ + I P + + +V + R L+ ++ +
Sbjct: 418 RKEHM--IRPSVEHYACMVDLLGRANKLEEAAKIIE 451
>emb|CBI16054.3| unnamed protein product [Vitis vinifera]
Length = 476
Score = 465 bits (1196), Expect = e-128
Identities = 239/325 (73%), Positives = 263/325 (80%), Gaps = 7/325 (2%)
Frame = -1
Query: 1049 MWAFXXXXXXXXXXXXXXXXXPTRTSLKQLGCSVALRTTTTT-------DNNHLIQSLCR 891
MWAF PT S K C +ALR +TTT +NN LIQSLC+
Sbjct: 1 MWAFQTPQTIQQPHLPKPFHKPTAISPKPQ-CCLALRPSTTTRSNGDSNNNNPLIQSLCK 59
Query: 890 RGNLKRAFQVLSDEPDPTQHTYELLILSCIRQNSLSDGLNVQRHLIDDGLDQDPFLATKL 711
+GNL +A QVLS EP+PTQHTYELLILSC RQNSL G+++ RHLI DG DQDPFLATKL
Sbjct: 60 QGNLNQALQVLSQEPNPTQHTYELLILSCTRQNSLPQGIDLHRHLIHDGSDQDPFLATKL 119
Query: 710 INMFSELDSIDNARKVFDKTRNRTVYVWNALFRALTLAGQGKETLHLYRMMNHTGIPSDR 531
INM+SELDSIDNARKVFDKTR RT+YVWNALFRALTLAG G+E L LYR MN G+PSDR
Sbjct: 120 INMYSELDSIDNARKVFDKTRKRTIYVWNALFRALTLAGYGREVLDLYRRMNRIGVPSDR 179
Query: 530 FTYTYVLKACVASETLTSLLQKGKEIHAHILRHGFEGHVHIMTTLVDMYARFGYVLYASS 351
FTYTYVLKACVASE SLL G+EIH HILRHGFEGHVHIMTTL+DMYARFG VL AS
Sbjct: 180 FTYTYVLKACVASEAFVSLLLNGREIHGHILRHGFEGHVHIMTTLLDMYARFGCVLNASR 239
Query: 350 VFDEMPVKNVVSWSAMIACYAKNGKPFEALELFREMMLETQDSVPNSVTMVSVLQACAAL 171
VFD+MPVKNVVSWSAMIACY+KNGKP EALELFR+MMLE QD +PNSVTMVSVLQACAAL
Sbjct: 240 VFDQMPVKNVVSWSAMIACYSKNGKPLEALELFRKMMLENQDLLPNSVTMVSVLQACAAL 299
Query: 170 SALEQGKLIHAYILRRGLDSILPVI 96
+ALEQGKL+H YILRRGLDSILP++
Sbjct: 300 AALEQGKLMHGYILRRGLDSILPML 324
Score = 90.1 bits (222), Expect = 2e-15
Identities = 57/180 (31%), Positives = 95/180 (52%), Gaps = 5/180 (2%)
Frame = -1
Query: 527 TYTYVLKACVASETLTSLLQKGKEIHAHILRHGFEGHVHIMTTLVDMYARFGYVLYASSV 348
TY ++ +C T + L +G ++H H++ G + + T L++MY+ + A V
Sbjct: 80 TYELLILSC----TRQNSLPQGIDLHRHLIHDGSDQDPFLATKLINMYSELDSIDNARKV 135
Query: 347 FDEMPVKNVVSWSAMIACYAKNGKPFEALELFREMMLETQDSVPNS-VTMVSVLQACAA- 174
FD+ + + W+A+ G E L+L+R M + VP+ T VL+AC A
Sbjct: 136 FDKTRKRTIYVWNALFRALTLAGYGREVLDLYRRM---NRIGVPSDRFTYTYVLKACVAS 192
Query: 173 ---LSALEQGKLIHAYILRRGLDSILPVISALVTMYARCGNLDWGRRVFDRMEKRDVVSW 3
+S L G+ IH +ILR G + + +++ L+ MYAR G + RVFD+M ++VVSW
Sbjct: 193 EAFVSLLLNGREIHGHILRHGFEGHVHIMTTLLDMYARFGCVLNASRVFDQMPVKNVVSW 252
>ref|XP_002877513.1| hypothetical protein ARALYDRAFT_905886 [Arabidopsis lyrata subsp.
lyrata] gi|297323351|gb|EFH53772.1| hypothetical protein
ARALYDRAFT_905886 [Arabidopsis lyrata subsp. lyrata]
Length = 657
Score = 464 bits (1194), Expect = e-128
Identities = 238/333 (71%), Positives = 266/333 (79%), Gaps = 7/333 (2%)
Frame = -1
Query: 980 RTSLKQLGCSVALRTTTTTD-------NNHLIQSLCRRGNLKRAFQVLSDEPDPTQHTYE 822
R+ LK CSVAL + + NN LIQSLC+ G LK+A +VLS E P+Q TYE
Sbjct: 22 RSPLKPPLCSVALNNLSISSGAGAKISNNQLIQSLCKEGKLKQALRVLSQESSPSQQTYE 81
Query: 821 LLILSCIRQNSLSDGLNVQRHLIDDGLDQDPFLATKLINMFSELDSIDNARKVFDKTRNR 642
LLIL C ++SLSDGL V RH++D+G DQDPFLATKLI M+S+L S+D ARKVFDKTR R
Sbjct: 82 LLILCCGHRSSLSDGLRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKR 141
Query: 641 TVYVWNALFRALTLAGQGKETLHLYRMMNHTGIPSDRFTYTYVLKACVASETLTSLLQKG 462
T+YVWNALFRALTLAG G+E L LY MN G+ SDRFTYTYVLKACVASE L KG
Sbjct: 142 TIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTADHLTKG 201
Query: 461 KEIHAHILRHGFEGHVHIMTTLVDMYARFGYVLYASSVFDEMPVKNVVSWSAMIACYAKN 282
KEIHAH+ R G+ HV+IMTTLVDMYARFG V YAS VF+ MPV+NVVSWSAMIACYAKN
Sbjct: 202 KEIHAHLTRRGYNSHVYIMTTLVDMYARFGCVDYASYVFNGMPVRNVVSWSAMIACYAKN 261
Query: 281 GKPFEALELFREMMLETQDSVPNSVTMVSVLQACAALSALEQGKLIHAYILRRGLDSILP 102
GK FEAL FREMM ET+DS PNSVTMVSVLQACA+L+ALEQG+LIH YILRRGLDSILP
Sbjct: 262 GKAFEALRTFREMMTETKDSSPNSVTMVSVLQACASLAALEQGRLIHGYILRRGLDSILP 321
Query: 101 VISALVTMYARCGNLDWGRRVFDRMEKRDVVSW 3
VISALVTMY RCG LD G+RVFDRM RDVVSW
Sbjct: 322 VISALVTMYGRCGKLDVGQRVFDRMHDRDVVSW 354
Score = 120 bits (302), Expect = 8e-25
Identities = 80/275 (29%), Positives = 138/275 (50%), Gaps = 7/275 (2%)
Frame = -1
Query: 830 TYELLILSCIRQNSLSD----GLNVQRHLIDDGLDQDPFLATKLINMFSELDSIDNARKV 663
TY ++ +C+ +D G + HL G + ++ T L++M++ +D A V
Sbjct: 180 TYTYVLKACVASECTADHLTKGKEIHAHLTRRGYNSHVYIMTTLVDMYARFGCVDYASYV 239
Query: 662 FDKTRNRTVYVWNALFRALTLAGQGKETLHLYR-MMNHTGIPS-DRFTYTYVLKACVASE 489
F+ R V W+A+ G+ E L +R MM T S + T VL+AC +
Sbjct: 240 FNGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMTETKDSSPNSVTMVSVLQACAS-- 297
Query: 488 TLTSLLQKGKEIHAHILRHGFEGHVHIMTTLVDMYARFGYVLYASSVFDEMPVKNVVSWS 309
+ L++G+ IH +ILR G + + +++ LV MY R G + VFD M ++VVSW+
Sbjct: 298 --LAALEQGRLIHGYILRRGLDSILPVISALVTMYGRCGKLDVGQRVFDRMHDRDVVSWN 355
Query: 308 AMIACYAKNGKPFEALELFREMMLETQDSVPNSVTMVSVLQACAALSALEQGKLIHAYIL 129
++I+ Y +G +A+++F EM+ + P VT VSVL AC+ +E+GK + +
Sbjct: 356 SLISSYGVHGYGRKAIQIFEEML--ANGASPTPVTFVSVLGACSHEGLVEEGKRLFESMW 413
Query: 128 R-RGLDSILPVISALVTMYARCGNLDWGRRVFDRM 27
R G+ + + +V + R LD ++ M
Sbjct: 414 RDHGIKPQVEHYACMVDLLGRANRLDEAAKMVQDM 448
Score = 65.5 bits (158), Expect = 4e-08
Identities = 52/258 (20%), Positives = 107/258 (41%), Gaps = 2/258 (0%)
Frame = -1
Query: 875 RAFQVLSDEPDPTQHTYELLILSCIRQNSLSDGLNVQRHLIDDGLDQDPFLATKLINMFS 696
R + + P T ++ +C +L G + +++ GLD + + L+ M+
Sbjct: 272 REMMTETKDSSPNSVTMVSVLQACASLAALEQGRLIHGYILRRGLDSILPVISALVTMYG 331
Query: 695 ELDSIDNARKVFDKTRNRTVYVWNALFRALTLAGQGKETLHLYRMMNHTGIPSDRFTYTY 516
+D ++VFD+ +R V WN+L + + G G++ + ++ M G T+
Sbjct: 332 RCGKLDVGQRVFDRMHDRDVVSWNSLISSYGVHGYGRKAIQIFEEMLANGASPTPVTFVS 391
Query: 515 VLKACVASETLTSLLQKGKEIHAHILR-HGFEGHVHIMTTLVDMYARFGYVLYASSVFDE 339
VL AC + L+++GK + + R HG + V +VD+ R + A+ + +
Sbjct: 392 VLGAC----SHEGLVEEGKRLFESMWRDHGIKPQVEHYACMVDLLGRANRLDEAAKMVQD 447
Query: 338 MPVK-NVVSWSAMIACYAKNGKPFEALELFREMMLETQDSVPNSVTMVSVLQACAALSAL 162
M + W +++ +G A R + + N V + + A
Sbjct: 448 MRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIY---AEAQMW 504
Query: 161 EQGKLIHAYILRRGLDSI 108
++ K + + RGL +
Sbjct: 505 DEVKRVKKLLEHRGLQKL 522
>ref|NP_190263.1| protein CHLORORESPIRATORY REDUCTION 2 [Arabidopsis thaliana]
gi|75207666|sp|Q9STF3.1|PP265_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At3g46790, chloroplastic; AltName: Full=Protein
CHLORORESPIRATORY REDUCTION 2; Flags: Precursor
gi|5541680|emb|CAB51186.1| putative protein [Arabidopsis
thaliana] gi|110741961|dbj|BAE98921.1| hypothetical
protein [Arabidopsis thaliana]
gi|332644684|gb|AEE78205.1| protein chlororespiratory
reduction 2 [Arabidopsis thaliana]
Length = 657
Score = 462 bits (1190), Expect = e-128
Identities = 237/333 (71%), Positives = 265/333 (79%), Gaps = 7/333 (2%)
Frame = -1
Query: 980 RTSLKQLGCSVALRTTTTTD-------NNHLIQSLCRRGNLKRAFQVLSDEPDPTQHTYE 822
R+ LK CSVAL + + NN LIQSLC+ G LK+A +VLS E P+Q TYE
Sbjct: 22 RSPLKPPSCSVALNNPSISSGAGAKISNNQLIQSLCKEGKLKQAIRVLSQESSPSQQTYE 81
Query: 821 LLILSCIRQNSLSDGLNVQRHLIDDGLDQDPFLATKLINMFSELDSIDNARKVFDKTRNR 642
LLIL C ++SLSD L V RH++D+G DQDPFLATKLI M+S+L S+D ARKVFDKTR R
Sbjct: 82 LLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKR 141
Query: 641 TVYVWNALFRALTLAGQGKETLHLYRMMNHTGIPSDRFTYTYVLKACVASETLTSLLQKG 462
T+YVWNALFRALTLAG G+E L LY MN G+ SDRFTYTYVLKACVASE + L KG
Sbjct: 142 TIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKG 201
Query: 461 KEIHAHILRHGFEGHVHIMTTLVDMYARFGYVLYASSVFDEMPVKNVVSWSAMIACYAKN 282
KEIHAH+ R G+ HV+IMTTLVDMYARFG V YAS VF MPV+NVVSWSAMIACYAKN
Sbjct: 202 KEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKN 261
Query: 281 GKPFEALELFREMMLETQDSVPNSVTMVSVLQACAALSALEQGKLIHAYILRRGLDSILP 102
GK FEAL FREMM ET+DS PNSVTMVSVLQACA+L+ALEQGKLIH YILRRGLDSILP
Sbjct: 262 GKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILP 321
Query: 101 VISALVTMYARCGNLDWGRRVFDRMEKRDVVSW 3
VISALVTMY RCG L+ G+RVFDRM RDVVSW
Sbjct: 322 VISALVTMYGRCGKLEVGQRVFDRMHDRDVVSW 354
Score = 122 bits (306), Expect = 3e-25
Identities = 82/275 (29%), Positives = 136/275 (49%), Gaps = 7/275 (2%)
Frame = -1
Query: 830 TYELLILSCIRQ----NSLSDGLNVQRHLIDDGLDQDPFLATKLINMFSELDSIDNARKV 663
TY ++ +C+ N L G + HL G ++ T L++M++ +D A V
Sbjct: 180 TYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYV 239
Query: 662 FDKTRNRTVYVWNALFRALTLAGQGKETLHLYR-MMNHTGIPS-DRFTYTYVLKACVASE 489
F R V W+A+ G+ E L +R MM T S + T VL+AC +
Sbjct: 240 FGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACAS-- 297
Query: 488 TLTSLLQKGKEIHAHILRHGFEGHVHIMTTLVDMYARFGYVLYASSVFDEMPVKNVVSWS 309
+ L++GK IH +ILR G + + +++ LV MY R G + VFD M ++VVSW+
Sbjct: 298 --LAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWN 355
Query: 308 AMIACYAKNGKPFEALELFREMMLETQDSVPNSVTMVSVLQACAALSALEQGKLIHAYIL 129
++I+ Y +G +A+++F EM+ + P VT VSVL AC+ +E+GK + +
Sbjct: 356 SLISSYGVHGYGKKAIQIFEEML--ANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMW 413
Query: 128 R-RGLDSILPVISALVTMYARCGNLDWGRRVFDRM 27
R G+ + + +V + R LD ++ M
Sbjct: 414 RDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDM 448
Score = 63.9 bits (154), Expect = 1e-07
Identities = 50/250 (20%), Positives = 105/250 (42%), Gaps = 2/250 (0%)
Frame = -1
Query: 851 EPDPTQHTYELLILSCIRQNSLSDGLNVQRHLIDDGLDQDPFLATKLINMFSELDSIDNA 672
+ P T ++ +C +L G + +++ GLD + + L+ M+ ++
Sbjct: 280 DSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVG 339
Query: 671 RKVFDKTRNRTVYVWNALFRALTLAGQGKETLHLYRMMNHTGIPSDRFTYTYVLKACVAS 492
++VFD+ +R V WN+L + + G GK+ + ++ M G T+ VL AC
Sbjct: 340 QRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGAC--- 396
Query: 491 ETLTSLLQKGKEIHAHILR-HGFEGHVHIMTTLVDMYARFGYVLYASSVFDEMPVK-NVV 318
+ L+++GK + + R HG + + +VD+ R + A+ + +M +
Sbjct: 397 -SHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPK 455
Query: 317 SWSAMIACYAKNGKPFEALELFREMMLETQDSVPNSVTMVSVLQACAALSALEQGKLIHA 138
W +++ +G A R + + N V + + A ++ K +
Sbjct: 456 VWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIY---AEAQMWDEVKRVKK 512
Query: 137 YILRRGLDSI 108
+ RGL +
Sbjct: 513 LLEHRGLQKL 522
>ref|XP_006418855.1| hypothetical protein EUTSA_v10002433mg [Eutrema salsugineum]
gi|557096783|gb|ESQ37291.1| hypothetical protein
EUTSA_v10002433mg [Eutrema salsugineum]
Length = 659
Score = 461 bits (1187), Expect = e-127
Identities = 237/335 (70%), Positives = 268/335 (80%), Gaps = 9/335 (2%)
Frame = -1
Query: 980 RTSLKQLGCSVALRTTTTTD--------NNHLIQSLCRRGNLKRAFQVLSDEPDPTQHTY 825
R S K CSVA+ + T NN LIQSLC+ GNLK+A +VLS E P+Q TY
Sbjct: 22 RCSPKPPSCSVAVNNPSKTSASDGAKASNNQLIQSLCKEGNLKQALRVLSQESSPSQQTY 81
Query: 824 ELLILSCIRQNSLSDGLNVQRHLIDDGLDQDPFLATKLINMFSELDSIDNARKVFDKTRN 645
ELLI C ++SLSD L V RH++D+G DQDPFLATKLI M+S+L S+D+ARKVFDKTR
Sbjct: 82 ELLIRCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDHARKVFDKTRK 141
Query: 644 RTVYVWNALFRALTLAGQGKETLHLYRMMNHTGIPSDRFTYTYVLKACVASETLTS-LLQ 468
RT+YVWNALFRALTLAG G+E L LY MN G+ SDRFTYTYVLKACVAS T+ L
Sbjct: 142 RTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASPECTADHLT 201
Query: 467 KGKEIHAHILRHGFEGHVHIMTTLVDMYARFGYVLYASSVFDEMPVKNVVSWSAMIACYA 288
KGKEIHAH+ R G+ HV+IMTTL+DMYARFG V YAS VFDEMPV+NVVSWSAMIACYA
Sbjct: 202 KGKEIHAHLTRRGYNSHVYIMTTLLDMYARFGCVDYASHVFDEMPVRNVVSWSAMIACYA 261
Query: 287 KNGKPFEALELFREMMLETQDSVPNSVTMVSVLQACAALSALEQGKLIHAYILRRGLDSI 108
KNGK FEAL FREMM ET+DS PNSVTMVSVLQACA+L+ALEQG+LIH YILRRGLDSI
Sbjct: 262 KNGKAFEALRTFREMMTETKDSSPNSVTMVSVLQACASLAALEQGRLIHGYILRRGLDSI 321
Query: 107 LPVISALVTMYARCGNLDWGRRVFDRMEKRDVVSW 3
LPVISALVTMY RCG L+ G+RVFDRM +RDVVSW
Sbjct: 322 LPVISALVTMYGRCGRLEVGQRVFDRMHERDVVSW 356
Score = 124 bits (310), Expect = 1e-25
Identities = 81/276 (29%), Positives = 140/276 (50%), Gaps = 8/276 (2%)
Frame = -1
Query: 830 TYELLILSCIRQ-----NSLSDGLNVQRHLIDDGLDQDPFLATKLINMFSELDSIDNARK 666
TY ++ +C+ + L+ G + HL G + ++ T L++M++ +D A
Sbjct: 181 TYTYVLKACVASPECTADHLTKGKEIHAHLTRRGYNSHVYIMTTLLDMYARFGCVDYASH 240
Query: 665 VFDKTRNRTVYVWNALFRALTLAGQGKETLHLYR-MMNHTGIPS-DRFTYTYVLKACVAS 492
VFD+ R V W+A+ G+ E L +R MM T S + T VL+AC +
Sbjct: 241 VFDEMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMTETKDSSPNSVTMVSVLQACAS- 299
Query: 491 ETLTSLLQKGKEIHAHILRHGFEGHVHIMTTLVDMYARFGYVLYASSVFDEMPVKNVVSW 312
+ L++G+ IH +ILR G + + +++ LV MY R G + VFD M ++VVSW
Sbjct: 300 ---LAALEQGRLIHGYILRRGLDSILPVISALVTMYGRCGRLEVGQRVFDRMHERDVVSW 356
Query: 311 SAMIACYAKNGKPFEALELFREMMLETQDSVPNSVTMVSVLQACAALSALEQGKLIHAYI 132
+++I+ Y +G +A+++F EM+ + P VT VSVL AC+ +E+GK + +
Sbjct: 357 NSLISSYGVHGYGRKAIQIFEEML--ANGASPTPVTFVSVLGACSHEGLVEEGKRLFESM 414
Query: 131 LR-RGLDSILPVISALVTMYARCGNLDWGRRVFDRM 27
R G+ + + +V + R LD ++ M
Sbjct: 415 WRDHGIKPQVEHYACMVDLLGRANRLDEAAKMVQDM 450
Score = 62.8 bits (151), Expect = 3e-07
Identities = 51/258 (19%), Positives = 106/258 (41%), Gaps = 2/258 (0%)
Frame = -1
Query: 875 RAFQVLSDEPDPTQHTYELLILSCIRQNSLSDGLNVQRHLIDDGLDQDPFLATKLINMFS 696
R + + P T ++ +C +L G + +++ GLD + + L+ M+
Sbjct: 274 REMMTETKDSSPNSVTMVSVLQACASLAALEQGRLIHGYILRRGLDSILPVISALVTMYG 333
Query: 695 ELDSIDNARKVFDKTRNRTVYVWNALFRALTLAGQGKETLHLYRMMNHTGIPSDRFTYTY 516
++ ++VFD+ R V WN+L + + G G++ + ++ M G T+
Sbjct: 334 RCGRLEVGQRVFDRMHERDVVSWNSLISSYGVHGYGRKAIQIFEEMLANGASPTPVTFVS 393
Query: 515 VLKACVASETLTSLLQKGKEIHAHILR-HGFEGHVHIMTTLVDMYARFGYVLYASSVFDE 339
VL AC + L+++GK + + R HG + V +VD+ R + A+ + +
Sbjct: 394 VLGAC----SHEGLVEEGKRLFESMWRDHGIKPQVEHYACMVDLLGRANRLDEAAKMVQD 449
Query: 338 MPVK-NVVSWSAMIACYAKNGKPFEALELFREMMLETQDSVPNSVTMVSVLQACAALSAL 162
M + W +++ +G A R + + N V + + +
Sbjct: 450 MRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDKV 509
Query: 161 EQGKLIHAYILRRGLDSI 108
++ K + Y RGL +
Sbjct: 510 KKVKKLLEY---RGLQKL 524
>ref|XP_004307227.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 776
Score = 456 bits (1173), Expect = e-126
Identities = 221/307 (71%), Positives = 261/307 (85%)
Frame = -1
Query: 923 DNNHLIQSLCRRGNLKRAFQVLSDEPDPTQHTYELLILSCIRQNSLSDGLNVQRHLIDDG 744
+ N LIQSLC +G+LK A Q+ EP+P+Q T ELLILSCIRQ+SL DGL+V RHL++ G
Sbjct: 167 NKNQLIQSLCNQGDLKLALQLFPHEPNPSQQTCELLILSCIRQDSLPDGLDVHRHLVNGG 226
Query: 743 LDQDPFLATKLINMFSELDSIDNARKVFDKTRNRTVYVWNALFRALTLAGQGKETLHLYR 564
DQDPFLATKLI M+SELDSI+NAR+VFDKT RT+Y+WNALFRALTLAG G E L+LYR
Sbjct: 227 WDQDPFLATKLIEMYSELDSIENAREVFDKTHKRTIYMWNALFRALTLAGHGTEVLNLYR 286
Query: 563 MMNHTGIPSDRFTYTYVLKACVASETLTSLLQKGKEIHAHILRHGFEGHVHIMTTLVDMY 384
MN G+PSDRFTYTYVLKACV SE +SLLQKGKEIH HILRHG+ HVH+ TTL+DMY
Sbjct: 287 QMNAIGVPSDRFTYTYVLKACVVSECSSSLLQKGKEIHGHILRHGYGAHVHVTTTLLDMY 346
Query: 383 ARFGYVLYASSVFDEMPVKNVVSWSAMIACYAKNGKPFEALELFREMMLETQDSVPNSVT 204
ARFG V YASSVFD+M +NVVSWSAMIACYAKN +P+EA ELFR+M+LE D PNSVT
Sbjct: 347 ARFGCVSYASSVFDQMQNRNVVSWSAMIACYAKNARPYEAWELFRKMILEAPDMFPNSVT 406
Query: 203 MVSVLQACAALSALEQGKLIHAYILRRGLDSILPVISALVTMYARCGNLDWGRRVFDRME 24
MVSVLQACAAL+ALEQGK IH YILRRGLDS LPV+S+L+TMYARCG L+ ++VF++++
Sbjct: 407 MVSVLQACAALAALEQGKFIHGYILRRGLDSTLPVMSSLITMYARCGKLELAQQVFNKIK 466
Query: 23 KRDVVSW 3
++DVVSW
Sbjct: 467 RKDVVSW 473
Score = 129 bits (323), Expect = 3e-27
Identities = 84/291 (28%), Positives = 147/291 (50%), Gaps = 5/291 (1%)
Frame = -1
Query: 884 NLKRAFQVLSDEPDPTQHTYEL--LILSCIRQNSLSDGLNVQRHLIDDGLDQDPFLATKL 711
NL R + D +TY L ++S + L G + H++ G + T L
Sbjct: 283 NLYRQMNAIGVPSDRFTYTYVLKACVVSECSSSLLQKGKEIHGHILRHGYGAHVHVTTTL 342
Query: 710 INMFSELDSIDNARKVFDKTRNRTVYVWNALFRALTLAGQGKETLHLYRMM--NHTGIPS 537
++M++ + A VFD+ +NR V W+A+ + E L+R M +
Sbjct: 343 LDMYARFGCVSYASSVFDQMQNRNVVSWSAMIACYAKNARPYEAWELFRKMILEAPDMFP 402
Query: 536 DRFTYTYVLKACVASETLTSLLQKGKEIHAHILRHGFEGHVHIMTTLVDMYARFGYVLYA 357
+ T VL+AC A + L++GK IH +ILR G + + +M++L+ MYAR G + A
Sbjct: 403 NSVTMVSVLQACAA----LAALEQGKFIHGYILRRGLDSTLPVMSSLITMYARCGKLELA 458
Query: 356 SSVFDEMPVKNVVSWSAMIACYAKNGKPFEALELFREMMLETQDSVPNSVTMVSVLQACA 177
VF+++ K+VVSW+++I+ Y +G A+++F +M+ P+ ++ VSVL AC+
Sbjct: 459 QQVFNKIKRKDVVSWNSLISSYGIHGYGKRAIQVFEDMI--DHGVSPSYISFVSVLGACS 516
Query: 176 ALSALEQGKLIHAYILR-RGLDSILPVISALVTMYARCGNLDWGRRVFDRM 27
+E+GK+I ++R GL + + +V + R LD ++ D M
Sbjct: 517 HEGLVEEGKVIFQSMVREHGLYPSIEQYACMVDLLGRANRLDEAAKIIDNM 567
>ref|XP_006290707.1| hypothetical protein CARUB_v10016805mg [Capsella rubella]
gi|482559414|gb|EOA23605.1| hypothetical protein
CARUB_v10016805mg [Capsella rubella]
Length = 657
Score = 453 bits (1165), Expect = e-125
Identities = 229/325 (70%), Positives = 258/325 (79%), Gaps = 7/325 (2%)
Frame = -1
Query: 956 CSVALRTTTTT-------DNNHLIQSLCRRGNLKRAFQVLSDEPDPTQHTYELLILSCIR 798
CSVAL + NN LIQSLC+ G LK+A +VLS E P+Q TYELLIL C
Sbjct: 30 CSVALNNPSIAASAGAKISNNQLIQSLCKEGKLKQALRVLSQESSPSQQTYELLILCCGH 89
Query: 797 QNSLSDGLNVQRHLIDDGLDQDPFLATKLINMFSELDSIDNARKVFDKTRNRTVYVWNAL 618
+S SD V RH++D+G DQDPFLATKLI M+S+L S+D ARKVFDKT RT+YVWNAL
Sbjct: 90 HSSFSDARRVHRHILDNGFDQDPFLATKLIGMYSDLGSVDYARKVFDKTHKRTIYVWNAL 149
Query: 617 FRALTLAGQGKETLHLYRMMNHTGIPSDRFTYTYVLKACVASETLTSLLQKGKEIHAHIL 438
FRALTLAG G+E L LY MN G+ SDRFTYTYVLKACVASE + L KGKEIHAH+
Sbjct: 150 FRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTANCLTKGKEIHAHLT 209
Query: 437 RHGFEGHVHIMTTLVDMYARFGYVLYASSVFDEMPVKNVVSWSAMIACYAKNGKPFEALE 258
R G+ HV+IMTTL+DMYARFG V YAS VF+ MPVKNVVSWSAMIACYAKNGK FEAL
Sbjct: 210 RRGYNSHVYIMTTLLDMYARFGCVDYASYVFNGMPVKNVVSWSAMIACYAKNGKAFEALR 269
Query: 257 LFREMMLETQDSVPNSVTMVSVLQACAALSALEQGKLIHAYILRRGLDSILPVISALVTM 78
FREMM ET+D+ PNSVTMVSVLQACA+L+ALEQG+LIH YILRRGLDSILPVISALVTM
Sbjct: 270 TFREMMTETKDASPNSVTMVSVLQACASLAALEQGRLIHGYILRRGLDSILPVISALVTM 329
Query: 77 YARCGNLDWGRRVFDRMEKRDVVSW 3
Y RCG L+ G+RVFDRM+ RDVVSW
Sbjct: 330 YGRCGKLEVGQRVFDRMDDRDVVSW 354
Score = 121 bits (303), Expect = 6e-25
Identities = 80/275 (29%), Positives = 138/275 (50%), Gaps = 7/275 (2%)
Frame = -1
Query: 830 TYELLILSCIRQ----NSLSDGLNVQRHLIDDGLDQDPFLATKLINMFSELDSIDNARKV 663
TY ++ +C+ N L+ G + HL G + ++ T L++M++ +D A V
Sbjct: 180 TYTYVLKACVASECTANCLTKGKEIHAHLTRRGYNSHVYIMTTLLDMYARFGCVDYASYV 239
Query: 662 FDKTRNRTVYVWNALFRALTLAGQGKETLHLYR-MMNHTGIPS-DRFTYTYVLKACVASE 489
F+ + V W+A+ G+ E L +R MM T S + T VL+AC +
Sbjct: 240 FNGMPVKNVVSWSAMIACYAKNGKAFEALRTFREMMTETKDASPNSVTMVSVLQACAS-- 297
Query: 488 TLTSLLQKGKEIHAHILRHGFEGHVHIMTTLVDMYARFGYVLYASSVFDEMPVKNVVSWS 309
+ L++G+ IH +ILR G + + +++ LV MY R G + VFD M ++VVSW+
Sbjct: 298 --LAALEQGRLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMDDRDVVSWN 355
Query: 308 AMIACYAKNGKPFEALELFREMMLETQDSVPNSVTMVSVLQACAALSALEQGK-LIHAYI 132
++I+ Y +G +A+++F EM+ + P VT VSVL AC+ +E+GK L +
Sbjct: 356 SLISSYGVHGYGRKAIQIFEEML--ANGATPTPVTFVSVLGACSHEGLVEEGKRLFESMW 413
Query: 131 LRRGLDSILPVISALVTMYARCGNLDWGRRVFDRM 27
G+ + + +V + R LD ++ M
Sbjct: 414 SDHGIKPQVEHYACMVDLLGRANRLDEAAKMVQDM 448
Score = 60.1 bits (144), Expect = 2e-06
Identities = 39/181 (21%), Positives = 81/181 (44%), Gaps = 1/181 (0%)
Frame = -1
Query: 875 RAFQVLSDEPDPTQHTYELLILSCIRQNSLSDGLNVQRHLIDDGLDQDPFLATKLINMFS 696
R + + P T ++ +C +L G + +++ GLD + + L+ M+
Sbjct: 272 REMMTETKDASPNSVTMVSVLQACASLAALEQGRLIHGYILRRGLDSILPVISALVTMYG 331
Query: 695 ELDSIDNARKVFDKTRNRTVYVWNALFRALTLAGQGKETLHLYRMMNHTGIPSDRFTYTY 516
++ ++VFD+ +R V WN+L + + G G++ + ++ M G T+
Sbjct: 332 RCGKLEVGQRVFDRMDDRDVVSWNSLISSYGVHGYGRKAIQIFEEMLANGATPTPVTFVS 391
Query: 515 VLKACVASETLTSLLQKGKEIHAHILR-HGFEGHVHIMTTLVDMYARFGYVLYASSVFDE 339
VL AC + L+++GK + + HG + V +VD+ R + A+ + +
Sbjct: 392 VLGAC----SHEGLVEEGKRLFESMWSDHGIKPQVEHYACMVDLLGRANRLDEAAKMVQD 447
Query: 338 M 336
M
Sbjct: 448 M 448
>ref|XP_003552616.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Glycine max]
Length = 658
Score = 447 bits (1150), Expect = e-123
Identities = 224/324 (69%), Positives = 257/324 (79%)
Frame = -1
Query: 974 SLKQLGCSVALRTTTTTDNNHLIQSLCRRGNLKRAFQVLSDEPDPTQHTYELLILSCIRQ 795
S L S L +NN LIQSLC+ GNLK+A +L EP+PTQ T+E LI SC +Q
Sbjct: 32 SFVSLNPSANLMNDIKGNNNQLIQSLCKGGNLKQAIHLLCCEPNPTQRTFEHLICSCAQQ 91
Query: 794 NSLSDGLNVQRHLIDDGLDQDPFLATKLINMFSELDSIDNARKVFDKTRNRTVYVWNALF 615
NSLSDGL+V R L+ G DQDPFLATKLINM+ EL SID ARKVFD+TR RT+YVWNALF
Sbjct: 92 NSLSDGLDVHRRLVSSGFDQDPFLATKLINMYYELGSIDRARKVFDETRERTIYVWNALF 151
Query: 614 RALTLAGQGKETLHLYRMMNHTGIPSDRFTYTYVLKACVASETLTSLLQKGKEIHAHILR 435
RAL + G GKE L LY MN GIPSDRFTYT+VLKACV SE S LQKGKEIHAHILR
Sbjct: 152 RALAMVGCGKELLDLYVQMNWIGIPSDRFTYTFVLKACVVSELSVSPLQKGKEIHAHILR 211
Query: 434 HGFEGHVHIMTTLVDMYARFGYVLYASSVFDEMPVKNVVSWSAMIACYAKNGKPFEALEL 255
HG+E ++H+MTTL+D+YA+FG V YA+SVF MP KN VSWSAMIAC+AKN P +ALEL
Sbjct: 212 HGYEANIHVMTTLLDVYAKFGSVSYANSVFCAMPTKNFVSWSAMIACFAKNEMPMKALEL 271
Query: 254 FREMMLETQDSVPNSVTMVSVLQACAALSALEQGKLIHAYILRRGLDSILPVISALVTMY 75
F+ MMLE DSVPNSVTMV+VLQACA L+ALEQGKLIH YILRRGLDSILPV++AL+TMY
Sbjct: 272 FQLMMLEAHDSVPNSVTMVNVLQACAGLAALEQGKLIHGYILRRGLDSILPVLNALITMY 331
Query: 74 ARCGNLDWGRRVFDRMEKRDVVSW 3
RCG + G+RVFD M+ RDVVSW
Sbjct: 332 GRCGEILMGQRVFDNMKNRDVVSW 355
Score = 115 bits (288), Expect = 4e-23
Identities = 70/276 (25%), Positives = 140/276 (50%), Gaps = 8/276 (2%)
Frame = -1
Query: 830 TYELLILSCIRQ----NSLSDGLNVQRHLIDDGLDQDPFLATKLINMFSELDSIDNARKV 663
TY ++ +C+ + L G + H++ G + + + T L++++++ S+ A V
Sbjct: 181 TYTFVLKACVVSELSVSPLQKGKEIHAHILRHGYEANIHVMTTLLDVYAKFGSVSYANSV 240
Query: 662 FDKTRNRTVYVWNALFRALTLAGQGKETLHLYRMMN---HTGIPSDRFTYTYVLKACVAS 492
F + W+A+ + L L+++M H +P+ T VL+AC
Sbjct: 241 FCAMPTKNFVSWSAMIACFAKNEMPMKALELFQLMMLEAHDSVPNS-VTMVNVLQACAG- 298
Query: 491 ETLTSLLQKGKEIHAHILRHGFEGHVHIMTTLVDMYARFGYVLYASSVFDEMPVKNVVSW 312
+ L++GK IH +ILR G + + ++ L+ MY R G +L VFD M ++VVSW
Sbjct: 299 ---LAALEQGKLIHGYILRRGLDSILPVLNALITMYGRCGEILMGQRVFDNMKNRDVVSW 355
Query: 311 SAMIACYAKNGKPFEALELFREMMLETQDSVPNSVTMVSVLQACAALSALEQGKLIHAYI 132
+++I+ Y +G +A+++F M+ Q S P+ ++ ++VL AC+ +E+GK++ +
Sbjct: 356 NSLISIYGMHGFGKKAIQIFENMI--HQGSSPSYISFITVLGACSHAGLVEEGKILFESM 413
Query: 131 LRR-GLDSILPVISALVTMYARCGNLDWGRRVFDRM 27
L + + + + +V + R LD ++ + M
Sbjct: 414 LSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDM 449
>ref|XP_007139395.1| hypothetical protein PHAVU_008G025900g [Phaseolus vulgaris]
gi|561012528|gb|ESW11389.1| hypothetical protein
PHAVU_008G025900g [Phaseolus vulgaris]
Length = 658
Score = 441 bits (1135), Expect = e-121
Identities = 218/308 (70%), Positives = 251/308 (81%)
Frame = -1
Query: 926 TDNNHLIQSLCRRGNLKRAFQVLSDEPDPTQHTYELLILSCIRQNSLSDGLNVQRHLIDD 747
TDNN LIQSLC+ G+LK+A +L E +PTQ T+E LI SC +QNSLSDGL++ RHL +
Sbjct: 48 TDNNQLIQSLCKGGSLKQAIHLLLYETNPTQQTFEHLIYSCAQQNSLSDGLHIHRHLTNR 107
Query: 746 GLDQDPFLATKLINMFSELDSIDNARKVFDKTRNRTVYVWNALFRALTLAGQGKETLHLY 567
G DQDPFLATKLINM+ EL SID ARKVFD+T RT+YVWNALFRAL + G+G+E L LY
Sbjct: 108 GFDQDPFLATKLINMYYELGSIDRARKVFDETLERTIYVWNALFRALAMVGRGEELLDLY 167
Query: 566 RMMNHTGIPSDRFTYTYVLKACVASETLTSLLQKGKEIHAHILRHGFEGHVHIMTTLVDM 387
MN TG+PSDRFTYTYVLKACV SE L KGKEIHAHILRHG+E +VH+MTTL+D+
Sbjct: 168 AQMNSTGVPSDRFTYTYVLKACVVSELSVCPLWKGKEIHAHILRHGYEANVHVMTTLLDV 227
Query: 386 YARFGYVLYASSVFDEMPVKNVVSWSAMIACYAKNGKPFEALELFREMMLETQDSVPNSV 207
YARFG V A+SVF MP KN VSWSAMIAC+AKN P +ALELF+ MMLE DSVPNSV
Sbjct: 228 YARFGSVSDANSVFCAMPAKNFVSWSAMIACFAKNDMPMKALELFQLMMLEAGDSVPNSV 287
Query: 206 TMVSVLQACAALSALEQGKLIHAYILRRGLDSILPVISALVTMYARCGNLDWGRRVFDRM 27
TMVSVLQAC L+ALEQGKLIH YILRRGLDSILPV+SAL+TMY RCG + G+RVFD M
Sbjct: 288 TMVSVLQACGGLAALEQGKLIHGYILRRGLDSILPVLSALITMYGRCGEISMGQRVFDSM 347
Query: 26 EKRDVVSW 3
+ RDV+SW
Sbjct: 348 KNRDVISW 355
Score = 103 bits (258), Expect = 1e-19
Identities = 67/275 (24%), Positives = 134/275 (48%), Gaps = 7/275 (2%)
Frame = -1
Query: 830 TYELLILSCIRQN----SLSDGLNVQRHLIDDGLDQDPFLATKLINMFSELDSIDNARKV 663
TY ++ +C+ L G + H++ G + + + T L+++++ S+ +A V
Sbjct: 181 TYTYVLKACVVSELSVCPLWKGKEIHAHILRHGYEANVHVMTTLLDVYARFGSVSDANSV 240
Query: 662 FDKTRNRTVYVWNALFRALTLAGQGKETLHLYRMMNHTGIPS--DRFTYTYVLKACVASE 489
F + W+A+ + L L+++M S + T VL+AC
Sbjct: 241 FCAMPAKNFVSWSAMIACFAKNDMPMKALELFQLMMLEAGDSVPNSVTMVSVLQACGG-- 298
Query: 488 TLTSLLQKGKEIHAHILRHGFEGHVHIMTTLVDMYARFGYVLYASSVFDEMPVKNVVSWS 309
+ L++GK IH +ILR G + + +++ L+ MY R G + VFD M ++V+SW+
Sbjct: 299 --LAALEQGKLIHGYILRRGLDSILPVLSALITMYGRCGEISMGQRVFDSMKNRDVISWN 356
Query: 308 AMIACYAKNGKPFEALELFREMMLETQDSVPNSVTMVSVLQACAALSALEQGK-LIHAYI 132
++I+ Y +G +A+++F M+ Q P+ ++ ++VL AC +E+GK L +
Sbjct: 357 SLISIYGMHGFGKKAIQIFENMI--HQGVSPSYISFITVLGACGHAGLVEEGKILFESMP 414
Query: 131 LRRGLDSILPVISALVTMYARCGNLDWGRRVFDRM 27
+ +D + + +V + R LD ++ + M
Sbjct: 415 SKYRIDPGMEHYACVVDLLGRANRLDEAIKLIEDM 449
Score = 57.8 bits (138), Expect = 9e-06
Identities = 31/114 (27%), Positives = 54/114 (47%)
Frame = -1
Query: 842 PTQHTYELLILSCIRQNSLSDGLNVQRHLIDDGLDQDPFLATKLINMFSELDSIDNARKV 663
P T ++ +C +L G + +++ GLD + + LI M+ I ++V
Sbjct: 284 PNSVTMVSVLQACGGLAALEQGKLIHGYILRRGLDSILPVLSALITMYGRCGEISMGQRV 343
Query: 662 FDKTRNRTVYVWNALFRALTLAGQGKETLHLYRMMNHTGIPSDRFTYTYVLKAC 501
FD +NR V WN+L + G GK+ + ++ M H G+ ++ VL AC
Sbjct: 344 FDSMKNRDVISWNSLISIYGMHGFGKKAIQIFENMIHQGVSPSYISFITVLGAC 397
>ref|XP_004491940.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cicer arietinum]
Length = 661
Score = 441 bits (1135), Expect = e-121
Identities = 213/309 (68%), Positives = 254/309 (82%)
Frame = -1
Query: 929 TTDNNHLIQSLCRRGNLKRAFQVLSDEPDPTQHTYELLILSCIRQNSLSDGLNVQRHLID 750
T +NN LIQSLCR GNLK+A QVL EP+PTQ T+E+LI SC + NSLSDGL+V L+
Sbjct: 50 TNNNNDLIQSLCRGGNLKQAIQVLCTEPNPTQKTFEVLICSCAQHNSLSDGLDVHHRLVG 109
Query: 749 DGLDQDPFLATKLINMFSELDSIDNARKVFDKTRNRTVYVWNALFRALTLAGQGKETLHL 570
+GLDQDPFLATKLINM+ EL S+D+A KVFD+T+ +T+YVWNALFRAL + G+G+E L L
Sbjct: 110 NGLDQDPFLATKLINMYCELGSVDHACKVFDETQEKTIYVWNALFRALAMLGRGEELLDL 169
Query: 569 YRMMNHTGIPSDRFTYTYVLKACVASETLTSLLQKGKEIHAHILRHGFEGHVHIMTTLVD 390
Y MN GIPS+RFTYTY LKACV SE +KGKEIHAHILRHG+EGHVH+MTTL+D
Sbjct: 170 YGQMNWIGIPSNRFTYTYALKACVVSELSICSFRKGKEIHAHILRHGYEGHVHVMTTLLD 229
Query: 389 MYARFGYVLYASSVFDEMPVKNVVSWSAMIACYAKNGKPFEALELFREMMLETQDSVPNS 210
+YA+FG + YAS VF MP KN+VSWSAMIACYAKN P +ALELF+ MMLE DSVPN
Sbjct: 230 VYAKFGCISYASFVFGAMPAKNIVSWSAMIACYAKNEMPVKALELFQLMMLEACDSVPNP 289
Query: 209 VTMVSVLQACAALSALEQGKLIHAYILRRGLDSILPVISALVTMYARCGNLDWGRRVFDR 30
VTMVSVLQACA+L+ALE GKL+H YI+R+GLDSILPV++ L+TMY RCG + G+RVFD
Sbjct: 290 VTMVSVLQACASLAALEHGKLVHGYIIRKGLDSILPVLNTLITMYGRCGEISTGQRVFDY 349
Query: 29 MEKRDVVSW 3
M+KRDVVSW
Sbjct: 350 MKKRDVVSW 358
Score = 99.0 bits (245), Expect = 3e-18
Identities = 63/276 (22%), Positives = 133/276 (48%), Gaps = 7/276 (2%)
Frame = -1
Query: 830 TYELLILSCIRQN----SLSDGLNVQRHLIDDGLDQDPFLATKLINMFSELDSIDNARKV 663
TY + +C+ S G + H++ G + + T L++++++ I A V
Sbjct: 184 TYTYALKACVVSELSICSFRKGKEIHAHILRHGYEGHVHVMTTLLDVYAKFGCISYASFV 243
Query: 662 FDKTRNRTVYVWNALFRALTLAGQGKETLHLYRMMNHTGIPS--DRFTYTYVLKACVASE 489
F + + W+A+ + L L+++M S + T VL+AC +
Sbjct: 244 FGAMPAKNIVSWSAMIACYAKNEMPVKALELFQLMMLEACDSVPNPVTMVSVLQACAS-- 301
Query: 488 TLTSLLQKGKEIHAHILRHGFEGHVHIMTTLVDMYARFGYVLYASSVFDEMPVKNVVSWS 309
+ L+ GK +H +I+R G + + ++ TL+ MY R G + VFD M ++VVSW+
Sbjct: 302 --LAALEHGKLVHGYIIRKGLDSILPVLNTLITMYGRCGEISTGQRVFDYMKKRDVVSWN 359
Query: 308 AMIACYAKNGKPFEALELFREMMLETQDSVPNSVTMVSVLQACAALSALEQGKLIHAYIL 129
++I+ Y +G +A+++F M+ P+ ++ +++L AC+ +E+GK++ +L
Sbjct: 360 SLISIYGMHGFGKKAIQIFENMI--HNGVSPSYISFITILCACSHAGLVEEGKILFESML 417
Query: 128 RR-GLDSILPVISALVTMYARCGNLDWGRRVFDRME 24
+ + + + +V + R D ++ + M+
Sbjct: 418 SKYRIRPRMEHYACMVDLLGRANMFDEAMKLIEDMD 453
Score = 60.1 bits (144), Expect = 2e-06
Identities = 40/170 (23%), Positives = 75/170 (44%), Gaps = 1/170 (0%)
Frame = -1
Query: 842 PTQHTYELLILSCIRQNSLSDGLNVQRHLIDDGLDQDPFLATKLINMFSELDSIDNARKV 663
P T ++ +C +L G V ++I GLD + LI M+ I ++V
Sbjct: 287 PNPVTMVSVLQACASLAALEHGKLVHGYIIRKGLDSILPVLNTLITMYGRCGEISTGQRV 346
Query: 662 FDKTRNRTVYVWNALFRALTLAGQGKETLHLYRMMNHTGIPSDRFTYTYVLKACVASETL 483
FD + R V WN+L + G GK+ + ++ M H G+ ++ +L AC +
Sbjct: 347 FDYMKKRDVVSWNSLISIYGMHGFGKKAIQIFENMIHNGVSPSYISFITILCAC----SH 402
Query: 482 TSLLQKGKEIHAHIL-RHGFEGHVHIMTTLVDMYARFGYVLYASSVFDEM 336
L+++GK + +L ++ + +VD+ R A + ++M
Sbjct: 403 AGLVEEGKILFESMLSKYRIRPRMEHYACMVDLLGRANMFDEAMKLIEDM 452
>ref|XP_003621549.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87241485|gb|ABD33343.1| Tetratricopeptide-like
helical [Medicago truncatula]
gi|355496564|gb|AES77767.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 654
Score = 439 bits (1130), Expect = e-121
Identities = 211/309 (68%), Positives = 258/309 (83%)
Frame = -1
Query: 929 TTDNNHLIQSLCRRGNLKRAFQVLSDEPDPTQHTYELLILSCIRQNSLSDGLNVQRHLID 750
+ +N+ LIQSLCR GNLK+A Q+L EP+PT+ T+ELLI SCI QNSLSDG++V L+
Sbjct: 43 SNNNDDLIQSLCRGGNLKQAVQLLCCEPNPTKKTFELLINSCIEQNSLSDGVDVHHRLVG 102
Query: 749 DGLDQDPFLATKLINMFSELDSIDNARKVFDKTRNRTVYVWNALFRALTLAGQGKETLHL 570
GLDQDP+LATKLINM+ +L S+D+A KVFD+TR +T++VWNA+FRAL +A +G++ L L
Sbjct: 103 SGLDQDPYLATKLINMYCDLGSVDHACKVFDETREKTIFVWNAIFRALAMASRGEDLLVL 162
Query: 569 YRMMNHTGIPSDRFTYTYVLKACVASETLTSLLQKGKEIHAHILRHGFEGHVHIMTTLVD 390
Y MN GIPS+RFTYTYVLKACV SE L+KGKEIHAHILRHG+EGHVH+MTTL+D
Sbjct: 163 YGQMNWIGIPSNRFTYTYVLKACVVSELSICPLRKGKEIHAHILRHGYEGHVHVMTTLLD 222
Query: 389 MYARFGYVLYASSVFDEMPVKNVVSWSAMIACYAKNGKPFEALELFREMMLETQDSVPNS 210
+YARFGYV YASSVF MP KN+VSWSAMIACYAKN P +ALELF+ MMLE D+VPN
Sbjct: 223 VYARFGYVSYASSVFGAMPDKNIVSWSAMIACYAKNEMPMKALELFQIMMLEACDTVPNP 282
Query: 209 VTMVSVLQACAALSALEQGKLIHAYILRRGLDSILPVISALVTMYARCGNLDWGRRVFDR 30
+TMVSVLQACA+L+ALE GKL+HAY+LRRGLDS LPV++ L+TMY RCG + G+RVFD
Sbjct: 283 ITMVSVLQACASLAALEHGKLVHAYVLRRGLDSTLPVLNTLITMYGRCGEISTGQRVFDY 342
Query: 29 MEKRDVVSW 3
M+KRDV+SW
Sbjct: 343 MKKRDVISW 351
Score = 104 bits (259), Expect = 8e-20
Identities = 63/276 (22%), Positives = 134/276 (48%), Gaps = 7/276 (2%)
Frame = -1
Query: 830 TYELLILSCIRQN----SLSDGLNVQRHLIDDGLDQDPFLATKLINMFSELDSIDNARKV 663
TY ++ +C+ L G + H++ G + + T L+++++ + A V
Sbjct: 177 TYTYVLKACVVSELSICPLRKGKEIHAHILRHGYEGHVHVMTTLLDVYARFGYVSYASSV 236
Query: 662 FDKTRNRTVYVWNALFRALTLAGQGKETLHLYRMMNHTGIPS--DRFTYTYVLKACVASE 489
F ++ + W+A+ + L L+++M + + T VL+AC +
Sbjct: 237 FGAMPDKNIVSWSAMIACYAKNEMPMKALELFQIMMLEACDTVPNPITMVSVLQACAS-- 294
Query: 488 TLTSLLQKGKEIHAHILRHGFEGHVHIMTTLVDMYARFGYVLYASSVFDEMPVKNVVSWS 309
+ L+ GK +HA++LR G + + ++ TL+ MY R G + VFD M ++V+SW+
Sbjct: 295 --LAALEHGKLVHAYVLRRGLDSTLPVLNTLITMYGRCGEISTGQRVFDYMKKRDVISWN 352
Query: 308 AMIACYAKNGKPFEALELFREMMLETQDSVPNSVTMVSVLQACAALSALEQGKLIHAYIL 129
++I+ Y +G +A+++F M+ + P+ +T ++VL AC+ +E+ K++ +L
Sbjct: 353 SLISIYGMHGLGKKAIQIFENMI--NRGVSPSYITFITVLCACSHAGLVEEAKILFESML 410
Query: 128 RR-GLDSILPVISALVTMYARCGNLDWGRRVFDRME 24
+ + + + +V + R LD + M+
Sbjct: 411 NKYRIHPRMEHYACMVDILGRANRLDEAIELIQNMD 446
>ref|XP_003531885.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Glycine max]
Length = 658
Score = 431 bits (1109), Expect = e-118
Identities = 217/324 (66%), Positives = 254/324 (78%)
Frame = -1
Query: 974 SLKQLGCSVALRTTTTTDNNHLIQSLCRRGNLKRAFQVLSDEPDPTQHTYELLILSCIRQ 795
S L S L ++NN LIQSLC+ GNLK+A +L EP+PTQ T+E LI SC ++
Sbjct: 32 SFVSLNPSANLINDINSNNNQLIQSLCKGGNLKQALHLLCCEPNPTQQTFEHLIYSCAQK 91
Query: 794 NSLSDGLNVQRHLIDDGLDQDPFLATKLINMFSELDSIDNARKVFDKTRNRTVYVWNALF 615
NSLS GL+V R L+D G DQDPFLATKLINM+ EL SID A KVFD+TR RT+YVWNALF
Sbjct: 92 NSLSYGLDVHRCLVDSGFDQDPFLATKLINMYYELGSIDRALKVFDETRERTIYVWNALF 151
Query: 614 RALTLAGQGKETLHLYRMMNHTGIPSDRFTYTYVLKACVASETLTSLLQKGKEIHAHILR 435
RAL + G GKE L LY MN G PSDRFTYTYVLKACV SE L+KGKEIHAHILR
Sbjct: 152 RALAMVGHGKELLDLYIQMNWIGTPSDRFTYTYVLKACVVSELSVCPLRKGKEIHAHILR 211
Query: 434 HGFEGHVHIMTTLVDMYARFGYVLYASSVFDEMPVKNVVSWSAMIACYAKNGKPFEALEL 255
HG+E ++H+MTTL+D+YA+FG V YA+SVF MP KN VSWSAMIAC+AKN P +ALEL
Sbjct: 212 HGYEANIHVMTTLLDVYAKFGSVSYANSVFCAMPTKNFVSWSAMIACFAKNEMPMKALEL 271
Query: 254 FREMMLETQDSVPNSVTMVSVLQACAALSALEQGKLIHAYILRRGLDSILPVISALVTMY 75
F+ MM E +SVPNSVTMV++LQACA L+ALEQGKLIH YILRR LDSILPV++AL+TMY
Sbjct: 272 FQLMMFEACNSVPNSVTMVNMLQACAGLAALEQGKLIHGYILRRQLDSILPVLNALITMY 331
Query: 74 ARCGNLDWGRRVFDRMEKRDVVSW 3
RCG + G+RVFD M+KRDVVSW
Sbjct: 332 GRCGEVLMGQRVFDNMKKRDVVSW 355
Score = 105 bits (261), Expect = 5e-20
Identities = 62/242 (25%), Positives = 122/242 (50%), Gaps = 6/242 (2%)
Frame = -1
Query: 830 TYELLILSCIRQN----SLSDGLNVQRHLIDDGLDQDPFLATKLINMFSELDSIDNARKV 663
TY ++ +C+ L G + H++ G + + + T L++++++ S+ A V
Sbjct: 181 TYTYVLKACVVSELSVCPLRKGKEIHAHILRHGYEANIHVMTTLLDVYAKFGSVSYANSV 240
Query: 662 FDKTRNRTVYVWNALFRALTLAGQGKETLHLYRMMNHTGIPS--DRFTYTYVLKACVASE 489
F + W+A+ + L L+++M S + T +L+AC
Sbjct: 241 FCAMPTKNFVSWSAMIACFAKNEMPMKALELFQLMMFEACNSVPNSVTMVNMLQACAG-- 298
Query: 488 TLTSLLQKGKEIHAHILRHGFEGHVHIMTTLVDMYARFGYVLYASSVFDEMPVKNVVSWS 309
+ L++GK IH +ILR + + ++ L+ MY R G VL VFD M ++VVSW+
Sbjct: 299 --LAALEQGKLIHGYILRRQLDSILPVLNALITMYGRCGEVLMGQRVFDNMKKRDVVSWN 356
Query: 308 AMIACYAKNGKPFEALELFREMMLETQDSVPNSVTMVSVLQACAALSALEQGKLIHAYIL 129
++I+ Y +G +A+++F M+ Q P+ ++ ++VL AC+ +E+GK++ +L
Sbjct: 357 SLISIYGMHGFGKKAIQIFENMI--HQGVSPSYISFITVLGACSHAGLVEEGKILFESML 414
Query: 128 RR 123
+
Sbjct: 415 SK 416
>ref|XP_006353232.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Solanum tuberosum]
Length = 653
Score = 426 bits (1094), Expect = e-116
Identities = 213/319 (66%), Positives = 252/319 (78%)
Frame = -1
Query: 959 GCSVALRTTTTTDNNHLIQSLCRRGNLKRAFQVLSDEPDPTQHTYELLILSCIRQNSLSD 780
G S ++ + + + N IQS C++G LK A Q+LS EP+PTQHTYELLILSC ++S D
Sbjct: 38 GNSKSINSISRCNYNDSIQSFCKKGQLKEALQLLSQEPNPTQHTYELLILSCSEKHSFYD 97
Query: 779 GLNVQRHLIDDGLDQDPFLATKLINMFSELDSIDNARKVFDKTRNRTVYVWNALFRALTL 600
L V R LIDDG +QD FLATKLINMFS DSID+AR+VFDK NRT+++WNA FRALTL
Sbjct: 98 ALTVHRKLIDDGFEQDSFLATKLINMFSNFDSIDHARQVFDKIYNRTIFLWNAFFRALTL 157
Query: 599 AGQGKETLHLYRMMNHTGIPSDRFTYTYVLKACVASETLTSLLQKGKEIHAHILRHGFEG 420
AG G E L LYR MN GI SDRFTYTYVLKACV + + KEIHAHI RHG+E
Sbjct: 158 AGNGVEVLDLYRHMNAIGIQSDRFTYTYVLKACVVAS-----IPNHKEIHAHIFRHGYET 212
Query: 419 HVHIMTTLVDMYARFGYVLYASSVFDEMPVKNVVSWSAMIACYAKNGKPFEALELFREMM 240
H+HIMTTL+D+YARFG V A+ VF +MP KN+VSWSAMIACYAKNGKP EA ++FR+MM
Sbjct: 213 HIHIMTTLIDVYARFGSVQNATCVFSQMPQKNMVSWSAMIACYAKNGKPLEAFDVFRDMM 272
Query: 239 LETQDSVPNSVTMVSVLQACAALSALEQGKLIHAYILRRGLDSILPVISALVTMYARCGN 60
T +PNSVTMVSV+QACAAL ALEQGKL+H Y++R+GLDSILPV+SALVTMYARCG
Sbjct: 273 --THVLLPNSVTMVSVVQACAALGALEQGKLLHGYVVRKGLDSILPVLSALVTMYARCGA 330
Query: 59 LDWGRRVFDRMEKRDVVSW 3
L+ GRRVFD+M KRDVV+W
Sbjct: 331 LELGRRVFDQMGKRDVVAW 349
Score = 116 bits (290), Expect = 2e-23
Identities = 77/265 (29%), Positives = 136/265 (51%), Gaps = 1/265 (0%)
Frame = -1
Query: 941 RTTTTTDNNHLIQSLCRRGNLKRAFQVLSDEPDPTQHTYELLILSCIRQNSLSDGLNVQR 762
R T N + L R N A + SD + TY ++ +C+ S+ + +
Sbjct: 153 RALTLAGNGVEVLDLYRHMN---AIGIQSD-----RFTYTYVLKACVVA-SIPNHKEIHA 203
Query: 761 HLIDDGLDQDPFLATKLINMFSELDSIDNARKVFDKTRNRTVYVWNALFRALTLAGQGKE 582
H+ G + + T LI++++ S+ NA VF + + + W+A+ G+ E
Sbjct: 204 HIFRHGYETHIHIMTTLIDVYARFGSVQNATCVFSQMPQKNMVSWSAMIACYAKNGKPLE 263
Query: 581 TLHLYR-MMNHTGIPSDRFTYTYVLKACVASETLTSLLQKGKEIHAHILRHGFEGHVHIM 405
++R MM H +P+ T V++AC A L++GK +H +++R G + + ++
Sbjct: 264 AFDVFRDMMTHVLLPNS-VTMVSVVQACAA----LGALEQGKLLHGYVVRKGLDSILPVL 318
Query: 404 TTLVDMYARFGYVLYASSVFDEMPVKNVVSWSAMIACYAKNGKPFEALELFREMMLETQD 225
+ LV MYAR G + VFD+M ++VV+W++MI+ Y +G +A+E FREM+
Sbjct: 319 SALVTMYARCGALELGRRVFDQMGKRDVVAWNSMISSYGIHGFGAKAIETFREMI--RHG 376
Query: 224 SVPNSVTMVSVLQACAALSALEQGK 150
P+ ++ VSVL AC+ +E+GK
Sbjct: 377 VSPSPISFVSVLGACSHAGLVEEGK 401