BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia24_contig00026775
         (455 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34757.3| unnamed protein product [Vitis vinifera]              144   1e-32
emb|CAN66198.1| hypothetical protein VITISV_011232 [Vitis vinifera]   144   1e-32
ref|XP_002509696.1| DNA-directed RNA polymerase, putative [Ricin...   132   4e-29
ref|XP_007210915.1| hypothetical protein PRUPE_ppa000278mg [Prun...   129   3e-28
ref|XP_002275898.2| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   127   2e-27
ref|XP_007040111.1| DNA-directed RNA polymerase II subunit RPB1-...   127   2e-27
ref|XP_006358858.1| PREDICTED: DNA-directed RNA polymerase IV su...   121   1e-25
ref|XP_004147993.1| PREDICTED: DNA-directed RNA polymerase D sub...   120   3e-25
ref|XP_004245657.1| PREDICTED: DNA-directed RNA polymerase D sub...   119   6e-25
gb|EXC17779.1| DNA-directed RNA polymerase D subunit 1 [Morus no...   118   8e-25
ref|XP_006477375.1| PREDICTED: DNA-directed RNA polymerase IV su...   118   1e-24
ref|XP_006477376.1| PREDICTED: DNA-directed RNA polymerase IV su...   116   3e-24
ref|XP_006440521.1| hypothetical protein CICLE_v10018489mg [Citr...   116   3e-24
ref|XP_004298730.1| PREDICTED: DNA-directed RNA polymerase D sub...   114   1e-23
ref|XP_007158454.1| hypothetical protein PHAVU_002G153700g [Phas...   107   1e-21
ref|XP_007158453.1| hypothetical protein PHAVU_002G153700g [Phas...   107   1e-21
ref|XP_006573756.1| PREDICTED: DNA-directed RNA polymerase IV su...   105   7e-21
ref|XP_006573755.1| PREDICTED: DNA-directed RNA polymerase IV su...   105   7e-21
ref|XP_006573754.1| PREDICTED: DNA-directed RNA polymerase IV su...   105   7e-21
ref|NP_176490.2| DNA-directed RNA polymerase IV subunit 1 [Arabi...   103   3e-20

>emb|CBI34757.3| unnamed protein product [Vitis vinifera]
          Length = 1359

 Score =  144 bits (363), Expect = 1e-32
 Identities = 67/91 (73%), Positives = 76/91 (83%)
 Frame = +2

Query: 182 MDNDVYDEQQHPPGLLTSISFNVLTEADAEKMSVIEIDAVNEVSDPKLGFPNPSSQCSTC 361
           MDND  +EQQ P GLL  I F+V TE D EK+SV++IDAVNE++DPKLG PNPS QCSTC
Sbjct: 1   MDNDFLEEQQVPSGLLIGIKFDVSTEEDMEKISVMKIDAVNEITDPKLGVPNPSCQCSTC 60

Query: 362 GAKDIKKCEGHFGVIKFPVTILHPYYTSEVV 454
           GAKD KKCEGHFGVIKFP TILHPY+ +EVV
Sbjct: 61  GAKDTKKCEGHFGVIKFPFTILHPYFLTEVV 91


>emb|CAN66198.1| hypothetical protein VITISV_011232 [Vitis vinifera]
          Length = 1393

 Score =  144 bits (363), Expect = 1e-32
 Identities = 67/91 (73%), Positives = 76/91 (83%)
 Frame = +2

Query: 182 MDNDVYDEQQHPPGLLTSISFNVLTEADAEKMSVIEIDAVNEVSDPKLGFPNPSSQCSTC 361
           MDND  +EQQ P GLL  I F+V TE D EK+SV++IDAVNE++DPKLG PNPS QCSTC
Sbjct: 1   MDNDFLEEQQVPSGLLIGIKFDVSTEEDMEKISVMKIDAVNEITDPKLGVPNPSCQCSTC 60

Query: 362 GAKDIKKCEGHFGVIKFPVTILHPYYTSEVV 454
           GAKD KKCEGHFGVIKFP TILHPY+ +EVV
Sbjct: 61  GAKDTKKCEGHFGVIKFPFTILHPYFLTEVV 91


>ref|XP_002509696.1| DNA-directed RNA polymerase, putative [Ricinus communis]
           gi|223549595|gb|EEF51083.1| DNA-directed RNA polymerase,
           putative [Ricinus communis]
          Length = 1475

 Score =  132 bits (333), Expect = 4e-29
 Identities = 62/92 (67%), Positives = 77/92 (83%), Gaps = 1/92 (1%)
 Frame = +2

Query: 182 MDNDVYDE-QQHPPGLLTSISFNVLTEADAEKMSVIEIDAVNEVSDPKLGFPNPSSQCST 358
           M+ D+++E QQ P  LLT+I+F V TEA+ EK+SV+ ID V+EV+D KLG PNP++QCST
Sbjct: 1   MEADLFEERQQLPSALLTAITFGVSTEAEKEKLSVLTIDTVSEVTDSKLGLPNPTNQCST 60

Query: 359 CGAKDIKKCEGHFGVIKFPVTILHPYYTSEVV 454
           CG+KD+K CEGHFGVIKFP TILHPYY SEVV
Sbjct: 61  CGSKDLKSCEGHFGVIKFPFTILHPYYLSEVV 92


>ref|XP_007210915.1| hypothetical protein PRUPE_ppa000278mg [Prunus persica]
           gi|462406650|gb|EMJ12114.1| hypothetical protein
           PRUPE_ppa000278mg [Prunus persica]
          Length = 1356

 Score =  129 bits (325), Expect = 3e-28
 Identities = 60/90 (66%), Positives = 71/90 (78%)
 Frame = +2

Query: 182 MDNDVYDEQQHPPGLLTSISFNVLTEADAEKMSVIEIDAVNEVSDPKLGFPNPSSQCSTC 361
           MDN++Y+E+  P GL+T I  NV T+ D E +SV +IDAV EV+DPKLG PNPS QCSTC
Sbjct: 1   MDNELYEEEGVPSGLITGIHLNVSTQEDIENISVKQIDAVTEVTDPKLGLPNPSFQCSTC 60

Query: 362 GAKDIKKCEGHFGVIKFPVTILHPYYTSEV 451
           GA+ +K CEGHFG IKFP TILHPYY SEV
Sbjct: 61  GAEKLKCCEGHFGDIKFPCTILHPYYLSEV 90


>ref|XP_002275898.2| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase D
           subunit 1-like [Vitis vinifera]
          Length = 1560

 Score =  127 bits (319), Expect = 2e-27
 Identities = 67/124 (54%), Positives = 76/124 (61%), Gaps = 33/124 (26%)
 Frame = +2

Query: 182 MDNDVYDEQQHPPGLLTSISFNVLTEADAEKMSVIEIDAVNEVSDPKLGFPNPSSQCSTC 361
           MDND  +EQQ P GLL  I F+V TE D EK+SV++IDAVNE++DPKLG PNPS QCSTC
Sbjct: 1   MDNDFLEEQQVPSGLLIGIKFDVSTEEDMEKISVMKIDAVNEITDPKLGVPNPSCQCSTC 60

Query: 362 GAKDIKKCE---------------------------------GHFGVIKFPVTILHPYYT 442
           GAKD KKCE                                 GHFGVIKFP TILHPY+ 
Sbjct: 61  GAKDTKKCEGAVRQVIQKLYLLMISCYLYFLEYAKLXLFIFLGHFGVIKFPFTILHPYFL 120

Query: 443 SEVV 454
           +EVV
Sbjct: 121 TEVV 124


>ref|XP_007040111.1| DNA-directed RNA polymerase II subunit RPB1-B, putative [Theobroma
           cacao] gi|508777356|gb|EOY24612.1| DNA-directed RNA
           polymerase II subunit RPB1-B, putative [Theobroma cacao]
          Length = 1484

 Score =  127 bits (318), Expect = 2e-27
 Identities = 59/92 (64%), Positives = 71/92 (77%)
 Frame = +2

Query: 179 SMDNDVYDEQQHPPGLLTSISFNVLTEADAEKMSVIEIDAVNEVSDPKLGFPNPSSQCST 358
           SM+ND+Y+ +Q P   +T I FNV  + D EKMSV+EI A +EVSDPKLGFPN S+ C+T
Sbjct: 3   SMENDLYEAEQLPAAFVTGIRFNVSNDRDNEKMSVMEIAAPSEVSDPKLGFPNFSNHCTT 62

Query: 359 CGAKDIKKCEGHFGVIKFPVTILHPYYTSEVV 454
           CGA D+K CEGHFGVI FP  ILHPY+ SEVV
Sbjct: 63  CGAADMKHCEGHFGVINFPYAILHPYFLSEVV 94


>ref|XP_006358858.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X1
           [Solanum tuberosum]
          Length = 1446

 Score =  121 bits (303), Expect = 1e-25
 Identities = 56/90 (62%), Positives = 70/90 (77%)
 Frame = +2

Query: 182 MDNDVYDEQQHPPGLLTSISFNVLTEADAEKMSVIEIDAVNEVSDPKLGFPNPSSQCSTC 361
           M++D   EQQ P G+LT I+F++L+E DA K+S   I AVNEV+DP LGFPNP  QC+TC
Sbjct: 1   MEHDRNIEQQVPEGILTGINFSILSETDAAKLSAKVIGAVNEVTDPALGFPNPIFQCTTC 60

Query: 362 GAKDIKKCEGHFGVIKFPVTILHPYYTSEV 451
           GA D KKCEGHFG++ FP TIL+PY+ SEV
Sbjct: 61  GANDGKKCEGHFGLVNFPYTILNPYFVSEV 90


>ref|XP_004147993.1| PREDICTED: DNA-directed RNA polymerase D subunit 1-like [Cucumis
           sativus] gi|449494342|ref|XP_004159519.1| PREDICTED: LOW
           QUALITY PROTEIN: DNA-directed RNA polymerase D subunit
           1-like [Cucumis sativus]
          Length = 1469

 Score =  120 bits (300), Expect = 3e-25
 Identities = 55/90 (61%), Positives = 68/90 (75%)
 Frame = +2

Query: 182 MDNDVYDEQQHPPGLLTSISFNVLTEADAEKMSVIEIDAVNEVSDPKLGFPNPSSQCSTC 361
           M+++   E   P GLLT I+F+V  + D E ++VI +DA NEVSDPKLG PNPS QC+TC
Sbjct: 1   MEDEQDGELPIPSGLLTGINFSVSNQQDIENIAVITVDAANEVSDPKLGLPNPSYQCTTC 60

Query: 362 GAKDIKKCEGHFGVIKFPVTILHPYYTSEV 451
           GA  +K CEGHFGVIKFP TI+HPY+ SEV
Sbjct: 61  GASSLKFCEGHFGVIKFPYTIIHPYFLSEV 90


>ref|XP_004245657.1| PREDICTED: DNA-directed RNA polymerase D subunit 1 [Solanum
           lycopersicum]
          Length = 1446

 Score =  119 bits (297), Expect = 6e-25
 Identities = 55/90 (61%), Positives = 69/90 (76%)
 Frame = +2

Query: 182 MDNDVYDEQQHPPGLLTSISFNVLTEADAEKMSVIEIDAVNEVSDPKLGFPNPSSQCSTC 361
           M++D   EQQ P G+L  I+F++L+E DA K+S   I AVNEV+DP LGFPNP  QC+TC
Sbjct: 1   MEHDRNIEQQVPDGILRGINFSILSETDAAKLSAKVIGAVNEVTDPALGFPNPIFQCTTC 60

Query: 362 GAKDIKKCEGHFGVIKFPVTILHPYYTSEV 451
           GA D KKCEGHFG++ FP TIL+PY+ SEV
Sbjct: 61  GANDGKKCEGHFGLVNFPYTILNPYFVSEV 90


>gb|EXC17779.1| DNA-directed RNA polymerase D subunit 1 [Morus notabilis]
          Length = 1410

 Score =  118 bits (296), Expect = 8e-25
 Identities = 52/91 (57%), Positives = 70/91 (76%)
 Frame = +2

Query: 182 MDNDVYDEQQHPPGLLTSISFNVLTEADAEKMSVIEIDAVNEVSDPKLGFPNPSSQCSTC 361
           M+N+++++++ P G+LTSISF +  + D E  SV+ I+  NEV+DP+LG PNPSS CSTC
Sbjct: 1   MENELHEDERVPFGVLTSISFTISNKEDTESRSVMSIELSNEVTDPRLGLPNPSSSCSTC 60

Query: 362 GAKDIKKCEGHFGVIKFPVTILHPYYTSEVV 454
           GA D K CEGHFG IK P T+L+PY+ SEVV
Sbjct: 61  GANDSKSCEGHFGHIKLPFTVLNPYFVSEVV 91


>ref|XP_006477375.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X1
           [Citrus sinensis]
          Length = 1481

 Score =  118 bits (295), Expect = 1e-24
 Identities = 53/92 (57%), Positives = 73/92 (79%), Gaps = 1/92 (1%)
 Frame = +2

Query: 179 SMDNDVYDEQ-QHPPGLLTSISFNVLTEADAEKMSVIEIDAVNEVSDPKLGFPNPSSQCS 355
           SMDN+  +E  + P G+LT IS  + T+ + EK+SV+EI AV+EV++P+LG PNP+++CS
Sbjct: 38  SMDNEFCEEGLEVPSGILTGISLGISTDTEKEKLSVMEIGAVSEVTNPRLGLPNPTNECS 97

Query: 356 TCGAKDIKKCEGHFGVIKFPVTILHPYYTSEV 451
           +CGAKD K CEGHFG IKFP TILHPY+ S++
Sbjct: 98  SCGAKDRKACEGHFGFIKFPFTILHPYFLSDI 129


>ref|XP_006477376.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X2
           [Citrus sinensis] gi|568847098|ref|XP_006477377.1|
           PREDICTED: DNA-directed RNA polymerase IV subunit 1-like
           isoform X3 [Citrus sinensis]
           gi|568847100|ref|XP_006477378.1| PREDICTED: DNA-directed
           RNA polymerase IV subunit 1-like isoform X4 [Citrus
           sinensis]
          Length = 1443

 Score =  116 bits (291), Expect = 3e-24
 Identities = 52/91 (57%), Positives = 72/91 (79%), Gaps = 1/91 (1%)
 Frame = +2

Query: 182 MDNDVYDEQ-QHPPGLLTSISFNVLTEADAEKMSVIEIDAVNEVSDPKLGFPNPSSQCST 358
           MDN+  +E  + P G+LT IS  + T+ + EK+SV+EI AV+EV++P+LG PNP+++CS+
Sbjct: 1   MDNEFCEEGLEVPSGILTGISLGISTDTEKEKLSVMEIGAVSEVTNPRLGLPNPTNECSS 60

Query: 359 CGAKDIKKCEGHFGVIKFPVTILHPYYTSEV 451
           CGAKD K CEGHFG IKFP TILHPY+ S++
Sbjct: 61  CGAKDRKACEGHFGFIKFPFTILHPYFLSDI 91


>ref|XP_006440521.1| hypothetical protein CICLE_v10018489mg [Citrus clementina]
           gi|557542783|gb|ESR53761.1| hypothetical protein
           CICLE_v10018489mg [Citrus clementina]
          Length = 1443

 Score =  116 bits (291), Expect = 3e-24
 Identities = 52/91 (57%), Positives = 72/91 (79%), Gaps = 1/91 (1%)
 Frame = +2

Query: 182 MDNDVYDEQ-QHPPGLLTSISFNVLTEADAEKMSVIEIDAVNEVSDPKLGFPNPSSQCST 358
           MDN+  +E  + P G+LT IS  + T+ + EK+SV+EI AV+EV++P+LG PNP+++CS+
Sbjct: 1   MDNEFCEEGLEVPSGILTGISLGISTDTEKEKLSVMEIGAVSEVTNPRLGLPNPTNECSS 60

Query: 359 CGAKDIKKCEGHFGVIKFPVTILHPYYTSEV 451
           CGAKD K CEGHFG IKFP TILHPY+ S++
Sbjct: 61  CGAKDRKACEGHFGFIKFPFTILHPYFLSDI 91


>ref|XP_004298730.1| PREDICTED: DNA-directed RNA polymerase D subunit 1-like [Fragaria
           vesca subsp. vesca]
          Length = 1438

 Score =  114 bits (285), Expect = 1e-23
 Identities = 51/90 (56%), Positives = 65/90 (72%)
 Frame = +2

Query: 182 MDNDVYDEQQHPPGLLTSISFNVLTEADAEKMSVIEIDAVNEVSDPKLGFPNPSSQCSTC 361
           MDN++   +Q P   +T +  NV T  D EK+S + I+   +V+DPKLG PNP+SQCSTC
Sbjct: 1   MDNELNHGEQLPRACITGVHLNVSTREDTEKISTLLIETAAQVNDPKLGLPNPTSQCSTC 60

Query: 362 GAKDIKKCEGHFGVIKFPVTILHPYYTSEV 451
           GA+D K C+GHFG IKFP +ILHPYY SEV
Sbjct: 61  GAQDTKLCDGHFGSIKFPCSILHPYYLSEV 90


>ref|XP_007158454.1| hypothetical protein PHAVU_002G153700g [Phaseolus vulgaris]
           gi|561031869|gb|ESW30448.1| hypothetical protein
           PHAVU_002G153700g [Phaseolus vulgaris]
          Length = 1464

 Score =  107 bits (268), Expect = 1e-21
 Identities = 48/90 (53%), Positives = 67/90 (74%)
 Frame = +2

Query: 182 MDNDVYDEQQHPPGLLTSISFNVLTEADAEKMSVIEIDAVNEVSDPKLGFPNPSSQCSTC 361
           MD++ +   + P G++ +I F+VLTE D EK+SV+EI+A  +V+   LG PN S +C+TC
Sbjct: 1   MDDEFFYGNKAPSGVIRAIKFDVLTENDIEKVSVLEINAAGQVTGSTLGLPNTSDECATC 60

Query: 362 GAKDIKKCEGHFGVIKFPVTILHPYYTSEV 451
           G+K+ K CEGHFGVIKFP  ILHPY+ SE+
Sbjct: 61  GSKNKKICEGHFGVIKFPFPILHPYFMSEI 90


>ref|XP_007158453.1| hypothetical protein PHAVU_002G153700g [Phaseolus vulgaris]
           gi|561031868|gb|ESW30447.1| hypothetical protein
           PHAVU_002G153700g [Phaseolus vulgaris]
          Length = 1463

 Score =  107 bits (268), Expect = 1e-21
 Identities = 48/90 (53%), Positives = 67/90 (74%)
 Frame = +2

Query: 182 MDNDVYDEQQHPPGLLTSISFNVLTEADAEKMSVIEIDAVNEVSDPKLGFPNPSSQCSTC 361
           MD++ +   + P G++ +I F+VLTE D EK+SV+EI+A  +V+   LG PN S +C+TC
Sbjct: 1   MDDEFFYGNKAPSGVIRAIKFDVLTENDIEKVSVLEINAAGQVTGSTLGLPNTSDECATC 60

Query: 362 GAKDIKKCEGHFGVIKFPVTILHPYYTSEV 451
           G+K+ K CEGHFGVIKFP  ILHPY+ SE+
Sbjct: 61  GSKNKKICEGHFGVIKFPFPILHPYFMSEI 90


>ref|XP_006573756.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X3
           [Glycine max]
          Length = 1455

 Score =  105 bits (262), Expect = 7e-21
 Identities = 47/90 (52%), Positives = 63/90 (70%)
 Frame = +2

Query: 182 MDNDVYDEQQHPPGLLTSISFNVLTEADAEKMSVIEIDAVNEVSDPKLGFPNPSSQCSTC 361
           MD+D+    + P  ++ +I F+VLTE D E +SV+EI+A  +V+   LG PN S +C+TC
Sbjct: 1   MDDDLLQRNKTPSVVIKAIKFDVLTEEDIENISVLEINAAGQVTGSNLGLPNASDECATC 60

Query: 362 GAKDIKKCEGHFGVIKFPVTILHPYYTSEV 451
           G KD K CEGHFGVIKFP  ILHPY+  E+
Sbjct: 61  GTKDKKFCEGHFGVIKFPTPILHPYFMLEI 90


>ref|XP_006573755.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X2
           [Glycine max]
          Length = 1457

 Score =  105 bits (262), Expect = 7e-21
 Identities = 47/90 (52%), Positives = 63/90 (70%)
 Frame = +2

Query: 182 MDNDVYDEQQHPPGLLTSISFNVLTEADAEKMSVIEIDAVNEVSDPKLGFPNPSSQCSTC 361
           MD+D+    + P  ++ +I F+VLTE D E +SV+EI+A  +V+   LG PN S +C+TC
Sbjct: 1   MDDDLLQRNKTPSVVIKAIKFDVLTEEDIENISVLEINAAGQVTGSNLGLPNASDECATC 60

Query: 362 GAKDIKKCEGHFGVIKFPVTILHPYYTSEV 451
           G KD K CEGHFGVIKFP  ILHPY+  E+
Sbjct: 61  GTKDKKFCEGHFGVIKFPTPILHPYFMLEI 90


>ref|XP_006573754.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X1
           [Glycine max]
          Length = 1458

 Score =  105 bits (262), Expect = 7e-21
 Identities = 47/90 (52%), Positives = 63/90 (70%)
 Frame = +2

Query: 182 MDNDVYDEQQHPPGLLTSISFNVLTEADAEKMSVIEIDAVNEVSDPKLGFPNPSSQCSTC 361
           MD+D+    + P  ++ +I F+VLTE D E +SV+EI+A  +V+   LG PN S +C+TC
Sbjct: 1   MDDDLLQRNKTPSVVIKAIKFDVLTEEDIENISVLEINAAGQVTGSNLGLPNASDECATC 60

Query: 362 GAKDIKKCEGHFGVIKFPVTILHPYYTSEV 451
           G KD K CEGHFGVIKFP  ILHPY+  E+
Sbjct: 61  GTKDKKFCEGHFGVIKFPTPILHPYFMLEI 90


>ref|NP_176490.2| DNA-directed RNA polymerase IV subunit 1 [Arabidopsis thaliana]
           gi|334183598|ref|NP_001185298.1| DNA-directed RNA
           polymerase IV subunit 1 [Arabidopsis thaliana]
           gi|75335311|sp|Q9LQ02.1|NRPD1_ARATH RecName:
           Full=DNA-directed RNA polymerase IV subunit 1; AltName:
           Full=DNA-directed RNA polymerase D subunit 1;
           Short=AtNRPD1a; Short=Nuclear RNA polymerase D 1a;
           AltName: Full=Protein RNA-DIRECTED DNA METHYLATION
           DEFECTIVE 3; AltName: Full=Protein SILENCING DEFECTIVE
           4; AltName: Full=Protein SILENCING MOVEMENT DEFICIENT 2;
           AltName: Full=RNA polymerase IV subunit 1a; Short=POL IV
           1a gi|8493592|gb|AAF75815.1|AC011000_18 Contains
           similarity to DNA-directed RNA Polymerase alpha-subunit
           from Methanococcus jannaschii gi|3915860 and contains
           Ribosomal protein L36 PF|00444 and RNA-Polymerase
           alpha-subunit PF|00623 domains. EST gb|AA597311 comes
           from this gene [Arabidopsis thaliana]
           gi|12323252|gb|AAG51604.1|AC010795_8 RNA polymerase IIA
           largest subunit, putative; 12353-6556 [Arabidopsis
           thaliana] gi|59939208|gb|AAX12372.1| DNA-directed RNA
           polymerase beta subunit [Arabidopsis thaliana]
           gi|68300852|gb|AAY89363.1| RNA polymerase IV largest
           subunit [Arabidopsis thaliana]
           gi|332195920|gb|AEE34041.1| nuclear RNA polymerase D1A
           [Arabidopsis thaliana] gi|332195921|gb|AEE34042.1|
           nuclear RNA polymerase D1A [Arabidopsis thaliana]
          Length = 1453

 Score =  103 bits (257), Expect = 3e-20
 Identities = 47/87 (54%), Positives = 62/87 (71%)
 Frame = +2

Query: 191 DVYDEQQHPPGLLTSISFNVLTEADAEKMSVIEIDAVNEVSDPKLGFPNPSSQCSTCGAK 370
           D  +E Q P G LTSI F++    D +KMSV+E++A N+V+D +LG PNP S C TCG+K
Sbjct: 3   DDCEELQVPVGTLTSIGFSISNNNDRDKMSVLEVEAPNQVTDSRLGLPNPDSVCRTCGSK 62

Query: 371 DIKKCEGHFGVIKFPVTILHPYYTSEV 451
           D K CEGHFGVI F  +I++PY+  EV
Sbjct: 63  DRKVCEGHFGVINFAYSIINPYFLKEV 89