BLASTX nr result

ID: Paeonia24_contig00026564 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia24_contig00026564
         (295 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD17351.1| contains similarity to retrovirus-related polypro...    56   6e-06
gb|AAF79348.1|AC007887_7 F15O4.13 [Arabidopsis thaliana]               56   6e-06

>gb|AAD17351.1| contains similarity to retrovirus-related polyproteins and to CCHC
            zinc finger protein (Pfam: PF00098, Score=16.3, E=0.051,
            E= 1) [Arabidopsis thaliana] gi|7267432|emb|CAB77944.1|
            putative polyprotein [Arabidopsis thaliana]
          Length = 1138

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 33/63 (52%), Positives = 38/63 (60%), Gaps = 16/63 (25%)
 Frame = +3

Query: 42   EFCFGLPRTRRGKDSILVVVDKF---------------LH-ANLFLDGVVRYHGIPKSIV 173
            +F  GLPRTR GKDSI VVVD+F               +H ANLF   VVR HG+PK+IV
Sbjct: 836  DFVVGLPRTRTGKDSIFVVVDRFSKMAHFIPCHKTDDAMHIANLFFREVVRLHGMPKTIV 895

Query: 174  YDR 182
             DR
Sbjct: 896  SDR 898


>gb|AAF79348.1|AC007887_7 F15O4.13 [Arabidopsis thaliana]
          Length = 1887

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 33/63 (52%), Positives = 38/63 (60%), Gaps = 16/63 (25%)
 Frame = +3

Query: 42   EFCFGLPRTRRGKDSILVVVDKF---------------LH-ANLFLDGVVRYHGIPKSIV 173
            +F  GLPRTR GKDSI VVVD+F               +H ANLF   VVR HG+PK+IV
Sbjct: 1461 DFVVGLPRTRTGKDSIFVVVDRFSKMAHFIPCHKTDDAIHIANLFFREVVRLHGMPKTIV 1520

Query: 174  YDR 182
             DR
Sbjct: 1521 SDR 1523


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