BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia24_contig00025935
         (482 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004296004.1| PREDICTED: putative ribonuclease H protein A...    85   9e-15
ref|XP_004309110.1| PREDICTED: putative ribonuclease H protein A...    70   2e-10
ref|XP_004309472.1| PREDICTED: putative ribonuclease H protein A...    69   9e-10
emb|CAN67512.1| hypothetical protein VITISV_026954 [Vitis vinifera]    59   7e-07
emb|CAN68220.1| hypothetical protein VITISV_005372 [Vitis vinifera]    58   1e-06
ref|XP_004308214.1| PREDICTED: putative ribonuclease H protein A...    58   2e-06
gb|ABD28730.1| Ribonuclease H [Medicago truncatula]                    56   5e-06
emb|CAN60729.1| hypothetical protein VITISV_013180 [Vitis vinifera]    55   8e-06

>ref|XP_004296004.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
           vesca subsp. vesca]
          Length = 751

 Score = 85.1 bits (209), Expect = 9e-15
 Identities = 52/135 (38%), Positives = 78/135 (57%), Gaps = 1/135 (0%)
 Frame = -3

Query: 480 PRQSVFIARLADNKLPTEDILQCKGIPLASCCCLCHTPSSPENLDHIFLHCQLAKTVWCW 301
           PR SV   R+   KLPT+D LQ +GIP  S C LC + S  E++ H+F++C  A+ +W W
Sbjct: 481 PRYSVLAWRIFHLKLPTDDQLQRRGIPFVSVCQLC-SFSHTEDIPHLFVNCSFAQHIWQW 539

Query: 300 LHQSFNITLPNLPQTIYELLFMVTHVRHAGQLKSLWLHSVANALWQIWKLRCKGKMD-QQ 124
           L   F  +LP+   ++ +L   VT    + QLK++W  S   AL  IWK   K + D +Q
Sbjct: 540 LAYYFGTSLPS-SGSLNDLWSSVTGKAFSPQLKNIWFASCLFALMAIWKSHNKLRFDNKQ 598

Query: 123 PNWPPHWRSVQARIQ 79
           P+    +RSV+A ++
Sbjct: 599 PSLMRVFRSVKAWVR 613


>ref|XP_004309110.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
           vesca subsp. vesca]
          Length = 872

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 42/119 (35%), Positives = 62/119 (52%)
 Frame = -3

Query: 480 PRQSVFIARLADNKLPTEDILQCKGIPLASCCCLCHTPSSPENLDHIFLHCQLAKTVWCW 301
           PR S+   ++    + +  +LQ +G+ L S C  C   +S E+LDHIFLHC  A +VW  
Sbjct: 538 PRMSLHAWKVMRGTVISYHLLQRRGVALVSRCEFCG--NSTESLDHIFLHCSFAASVWNH 595

Query: 300 LHQSFNITLPNLPQTIYELLFMVTHVRHAGQLKSLWLHSVANALWQIWKLRCKGKMDQQ 124
               F I L  +P TI E+  +   +  + QLK LWL    + LW IW  R + + D +
Sbjct: 596 FIYIFEIGL--VPNTIAEVFSLGLAMDRSPQLKELWLICFTSILWYIWHARNQIRFDSR 652


>ref|XP_004309472.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
           vesca subsp. vesca]
          Length = 364

 Score = 68.6 bits (166), Expect = 9e-10
 Identities = 44/117 (37%), Positives = 64/117 (54%)
 Frame = -3

Query: 480 PRQSVFIARLADNKLPTEDILQCKGIPLASCCCLCHTPSSPENLDHIFLHCQLAKTVWCW 301
           PR S+   ++   ++ +ED+LQ +GI LAS C LC      E+L HIFL C  A ++  W
Sbjct: 44  PRISLHSWKVLRGRVLSEDLLQRRGIALASRCVLCGRDG--ESLPHIFLTCSFAASL--W 99

Query: 300 LHQSFNITLPNLPQTIYELLFMVTHVRHAGQLKSLWLHSVANALWQIWKLRCKGKMD 130
            +++    L  LPQ + +LL+    V  + QLK +WL      LW IWK R K + D
Sbjct: 100 NNRAGLFELGCLPQNLVDLLY-YGGVGRSHQLKEIWLICYTTTLWFIWKARNKMRHD 155


>emb|CAN67512.1| hypothetical protein VITISV_026954 [Vitis vinifera]
          Length = 793

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 39/119 (32%), Positives = 55/119 (46%)
 Frame = -3

Query: 480  PRQSVFIARLADNKLPTEDILQCKGIPLASCCCLCHTPSSPENLDHIFLHCQLAKTVWCW 301
            PR S F       K  T D LQ +G PLA+ C LC      E++DHI LHC  A+T+W  
Sbjct: 663  PRVSFFGWEATWGKALTLDQLQKRGWPLANRCYLCQRHE--ESIDHILLHCAKARTLWAL 720

Query: 300  LHQSFNITLPNLPQTIYELLFMVTHVRHAGQLKSLWLHSVANALWQIWKLRCKGKMDQQ 124
            L   F +    LP T+   L          + K +W  +     W +WK+R K   +++
Sbjct: 721  LCSLFGVQWV-LPATVKATLLGWDGSFVGKKRKGVWRANPLCLFWMVWKVRNKVVFEEE 778


>emb|CAN68220.1| hypothetical protein VITISV_005372 [Vitis vinifera]
          Length = 577

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 39/113 (34%), Positives = 51/113 (45%)
 Frame = -3

Query: 480 PRQSVFIARLADNKLPTEDILQCKGIPLASCCCLCHTPSSPENLDHIFLHCQLAKTVWCW 301
           PR S F       K  T D LQ +G  LA+ C LC      E++DHI LHC  A+T+W  
Sbjct: 441 PRVSFFGWEATWGKTLTLDQLQRRGWALANRCYLCQRHE--ESIDHILLHCDKARTLWVL 498

Query: 300 LHQSFNITLPNLPQTIYELLFMVTHVRHAGQLKSLWLHSVANALWQIWKLRCK 142
           L   F +    LP  + E+L          + K +W  S     W +WK R K
Sbjct: 499 LFSMFGVQWV-LPAMVKEMLSGWNGTFVGKKRKGVWKASPLCLFWTVWKTRNK 550


>ref|XP_004308214.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
           vesca subsp. vesca]
          Length = 409

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 39/117 (33%), Positives = 60/117 (51%)
 Frame = -3

Query: 480 PRQSVFIARLADNKLPTEDILQCKGIPLASCCCLCHTPSSPENLDHIFLHCQLAKTVWCW 301
           PR S+   ++   ++ +ED+LQ +GI LAS C LC       +  HIFL C    ++  W
Sbjct: 75  PRISLHSWKVLRGRVLSEDLLQRRGIVLASRCVLCGR-DCESSFPHIFLTCSFVASL--W 131

Query: 300 LHQSFNITLPNLPQTIYELLFMVTHVRHAGQLKSLWLHSVANALWQIWKLRCKGKMD 130
            + +    L +LPQ + +L++    V  + QLK +WL      LW I K R K + D
Sbjct: 132 NNWACLFELGSLPQNLVDLIY-YGGVGRSHQLKEIWLICYTTTLWFIGKARNKIRHD 187


>gb|ABD28730.1| Ribonuclease H [Medicago truncatula]
          Length = 409

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 38/117 (32%), Positives = 56/117 (47%), Gaps = 2/117 (1%)
 Frame = -3

Query: 480 PRQSVFIA-RLADNKLPTEDILQCKGIPLAS-CCCLCHTPSSPENLDHIFLHCQLAKTVW 307
           P    FI  R   NKLPT+D L+ +G  + S CCC C   +  E   HIFL C +   +W
Sbjct: 81  PPTGAFITWRFLHNKLPTDDNLRKRGCYIVSICCCFCRKQA--ETSSHIFLQCPVTLQLW 138

Query: 306 CWLHQSFNITLPNLPQTIYELLFMVTHVRHAGQLKSLWLHSVANALWQIWKLRCKGK 136
            WL ++ +  L     +I  +  MV HV ++         ++ + +W IW L C  K
Sbjct: 139 DWLLKATDQHLDF--SSILNISRMVQHVMNS---------AIVHIMWSIW-LECNNK 183


>emb|CAN60729.1| hypothetical protein VITISV_013180 [Vitis vinifera]
          Length = 642

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 33/99 (33%), Positives = 49/99 (49%)
 Frame = -3

Query: 420 LQCKGIPLASCCCLCHTPSSPENLDHIFLHCQLAKTVWCWLHQSFNITLPNLPQTIYELL 241
           LQ +G  LA+ C LC      E++DHI LH + A+T+W  L+  F +    LP TI E+L
Sbjct: 192 LQKRGWALANRCYLCQRHE--ESIDHILLHFEKARTLWALLYSMFRVQWV-LPTTIKEML 248

Query: 240 FMVTHVRHAGQLKSLWLHSVANALWQIWKLRCKGKMDQQ 124
                     + K +W  S     W +WK R K   +++
Sbjct: 249 LRWNGSFVGKKRKGVWRASPLCLFWTVWKARNKVAFEEE 287