BLASTX nr result

ID: Paeonia24_contig00025931 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia24_contig00025931
         (418 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007041717.1| F-box family protein, putative isoform 3 [Th...    61   1e-07
ref|XP_007041716.1| F-box family protein, putative isoform 2 [Th...    61   1e-07
ref|XP_007041715.1| F-box family protein, putative isoform 1 [Th...    61   1e-07

>ref|XP_007041717.1| F-box family protein, putative isoform 3 [Theobroma cacao]
           gi|508705652|gb|EOX97548.1| F-box family protein,
           putative isoform 3 [Theobroma cacao]
          Length = 407

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 46/144 (31%), Positives = 68/144 (47%), Gaps = 7/144 (4%)
 Frame = +1

Query: 1   MRLLTPLSGYPVE--PPTDPKGLNFLSSGLSE-----ICTYYYYKSSTPFVGTFPLRKVV 159
           ++LL PLS    +  P   PK LN L   + E     +  Y  Y S    VG   + KVV
Sbjct: 105 IQLLNPLSRSRFDSLPYNFPKPLNLLDFRVFELGEEYVLHYLNYHSYLGDVGNLYMEKVV 164

Query: 160 VSCSNPVTANDYAVMAMNYGHGMYQDVNGVLYFYKSGENEWGVMDRTPEKYYLSYVDDTF 339
           VSC +    ND+ ++ ++        V+G L  +KS E +W +++  P  Y         
Sbjct: 165 VSCLDN-NVNDFVLLTIH--------VSGKLAMFKSSEKKWTIIEDMPSPY--------- 206

Query: 340 GLYFNDLITYKGKFYAIDCRGRTI 411
               +D+I YKG FYA+D  GRT+
Sbjct: 207 ----DDVILYKGNFYAVDNTGRTV 226


>ref|XP_007041716.1| F-box family protein, putative isoform 2 [Theobroma cacao]
           gi|508705651|gb|EOX97547.1| F-box family protein,
           putative isoform 2 [Theobroma cacao]
          Length = 406

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 46/144 (31%), Positives = 68/144 (47%), Gaps = 7/144 (4%)
 Frame = +1

Query: 1   MRLLTPLSGYPVE--PPTDPKGLNFLSSGLSE-----ICTYYYYKSSTPFVGTFPLRKVV 159
           ++LL PLS    +  P   PK LN L   + E     +  Y  Y S    VG   + KVV
Sbjct: 105 IQLLNPLSRSRFDSLPYNFPKPLNLLDFRVFELGEEYVLHYLNYHSYLGDVGNLYMEKVV 164

Query: 160 VSCSNPVTANDYAVMAMNYGHGMYQDVNGVLYFYKSGENEWGVMDRTPEKYYLSYVDDTF 339
           VSC +    ND+ ++ ++        V+G L  +KS E +W +++  P  Y         
Sbjct: 165 VSCLDN-NVNDFVLLTIH--------VSGKLAMFKSSEKKWTIIEDMPSPY--------- 206

Query: 340 GLYFNDLITYKGKFYAIDCRGRTI 411
               +D+I YKG FYA+D  GRT+
Sbjct: 207 ----DDVILYKGNFYAVDNTGRTV 226


>ref|XP_007041715.1| F-box family protein, putative isoform 1 [Theobroma cacao]
           gi|508705650|gb|EOX97546.1| F-box family protein,
           putative isoform 1 [Theobroma cacao]
          Length = 411

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 46/144 (31%), Positives = 68/144 (47%), Gaps = 7/144 (4%)
 Frame = +1

Query: 1   MRLLTPLSGYPVE--PPTDPKGLNFLSSGLSE-----ICTYYYYKSSTPFVGTFPLRKVV 159
           ++LL PLS    +  P   PK LN L   + E     +  Y  Y S    VG   + KVV
Sbjct: 105 IQLLNPLSRSRFDSLPYNFPKPLNLLDFRVFELGEEYVLHYLNYHSYLGDVGNLYMEKVV 164

Query: 160 VSCSNPVTANDYAVMAMNYGHGMYQDVNGVLYFYKSGENEWGVMDRTPEKYYLSYVDDTF 339
           VSC +    ND+ ++ ++        V+G L  +KS E +W +++  P  Y         
Sbjct: 165 VSCLDN-NVNDFVLLTIH--------VSGKLAMFKSSEKKWTIIEDMPSPY--------- 206

Query: 340 GLYFNDLITYKGKFYAIDCRGRTI 411
               +D+I YKG FYA+D  GRT+
Sbjct: 207 ----DDVILYKGNFYAVDNTGRTV 226


Top