BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia24_contig00025540
         (616 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AHE41669.1| RNA polymerase beta' subunit (chloroplast) [Paeon...   350   2e-94
emb|CAP11918.1| RNA polymerase beta subunit [Paeonia kavachensis...   350   2e-94
gb|AHE41656.1| RNA polymerase beta' subunit (chloroplast) [Daphn...   331   9e-89
gb|AHE41666.1| RNA polymerase beta' subunit, partial (chloroplas...   330   2e-88
gb|AEI27566.1| RNA polymerase beta subunit [Neillia thibetica]        330   2e-88
gb|AEI27559.1| RNA polymerase beta subunit [Dryas octopetala]         329   5e-88
ref|YP_008965483.1| RNA polymerase beta' subunit [Pyrus spinosa]...   328   6e-88
ref|YP_004842229.1| RNA polymerase beta' subunit [Pyrus pyrifoli...   328   6e-88
ref|YP_005296090.1| rpoC2 gene product (chloroplast) [Pentactina...   328   8e-88
gb|ABV65775.1| RNA polymerase beta'' subunit, partial (chloropla...   328   8e-88
gb|ABV65740.1| RNA polymerase beta'' subunit (chloroplast) [Heuc...   328   8e-88
gb|AHN13527.1| RNA polymerase beta' subunit (chloroplast) [Prunu...   328   1e-87
ref|YP_009020028.1| RNA polymerase beta' subunit [Prunus mume] g...   328   1e-87
gb|AHE41667.1| RNA polymerase beta' subunit, partial (chloroplas...   328   1e-87
gb|AHE41654.1| RNA polymerase beta' subunit (chloroplast) [Ribes...   328   1e-87
ref|YP_008963470.1| RNA polymerase beta' subunit (chloroplast) [...   328   1e-87
ref|YP_007025458.1| RNA polymerase beta subunit (chloroplast) [F...   328   1e-87
ref|YP_006883327.1| RNA polymerase beta subunit [Fragaria mandsh...   328   1e-87
ref|YP_006883253.1| RNA polymerase beta subunit (chloroplast) [F...   328   1e-87
gb|AFQ39110.1| RNA polymerase beta subunit, partial [Fragaria ve...   328   1e-87

>gb|AHE41669.1| RNA polymerase beta' subunit (chloroplast) [Paeonia obovata]
          Length = 1392

 Score =  350 bits (898), Expect = 2e-94
 Identities = 172/183 (93%), Positives = 172/183 (93%)
 Frame = -2

Query: 549 RTDCGTTRGISVSPHQNGRMPERIFIQTLIGRVLADDIYMGQRCVAIRNQDIGIGLVNRF 370
           RTDCGTTRGISVSPHQNGRMPERIFIQTLIGRVLADDIYMGQRCVAIRNQDIGIGLVNRF
Sbjct: 221 RTDCGTTRGISVSPHQNGRMPERIFIQTLIGRVLADDIYMGQRCVAIRNQDIGIGLVNRF 280

Query: 369 ITFQAQPISIRTPFTCKSTSWICRLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLTL 190
           ITFQAQPISIRTPFTCKSTSWICRLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLTL
Sbjct: 281 ITFQAQPISIRTPFTCKSTSWICRLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLTL 340

Query: 189 RXXXXXXXXXXXTAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYVTIESENII 10
           R           TAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYVTIESENII
Sbjct: 341 RTFHTGGVFTGGTAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYVTIESENII 400

Query: 9   HNV 1
           HNV
Sbjct: 401 HNV 403


>emb|CAP11918.1| RNA polymerase beta subunit [Paeonia kavachensis]
           gi|164513652|emb|CAP11919.1| RNA polymerase beta subunit
           [Paeonia tenuifolia]
          Length = 227

 Score =  350 bits (898), Expect = 2e-94
 Identities = 172/183 (93%), Positives = 172/183 (93%)
 Frame = -2

Query: 549 RTDCGTTRGISVSPHQNGRMPERIFIQTLIGRVLADDIYMGQRCVAIRNQDIGIGLVNRF 370
           RTDCGTTRGISVSPHQNGRMPERIFIQTLIGRVLADDIYMGQRCVAIRNQDIGIGLVNRF
Sbjct: 29  RTDCGTTRGISVSPHQNGRMPERIFIQTLIGRVLADDIYMGQRCVAIRNQDIGIGLVNRF 88

Query: 369 ITFQAQPISIRTPFTCKSTSWICRLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLTL 190
           ITFQAQPISIRTPFTCKSTSWICRLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLTL
Sbjct: 89  ITFQAQPISIRTPFTCKSTSWICRLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLTL 148

Query: 189 RXXXXXXXXXXXTAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYVTIESENII 10
           R           TAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYVTIESENII
Sbjct: 149 RTFHTGGVFTGGTAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYVTIESENII 208

Query: 9   HNV 1
           HNV
Sbjct: 209 HNV 211


>gb|AHE41656.1| RNA polymerase beta' subunit (chloroplast) [Daphniphyllum oldhamii]
          Length = 1392

 Score =  331 bits (849), Expect = 9e-89
 Identities = 164/183 (89%), Positives = 169/183 (92%)
 Frame = -2

Query: 549 RTDCGTTRGISVSPHQNGRMPERIFIQTLIGRVLADDIYMGQRCVAIRNQDIGIGLVNRF 370
           RTDCGTTRGISVSP +NG MPERIFIQTLIGRVLADDIYMG RC+AIRNQDIGIGLVNRF
Sbjct: 221 RTDCGTTRGISVSP-RNGMMPERIFIQTLIGRVLADDIYMGPRCIAIRNQDIGIGLVNRF 279

Query: 369 ITFQAQPISIRTPFTCKSTSWICRLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLTL 190
           ITF+AQPISIRTPFTC+STSWICRLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLTL
Sbjct: 280 ITFRAQPISIRTPFTCRSTSWICRLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLTL 339

Query: 189 RXXXXXXXXXXXTAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYVTIESENII 10
           R           TAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYVTIESE+II
Sbjct: 340 RTFHTGGVFTGGTAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYVTIESEDII 399

Query: 9   HNV 1
           HNV
Sbjct: 400 HNV 402


>gb|AHE41666.1| RNA polymerase beta' subunit, partial (chloroplast) [Rhodoleia
           championii]
          Length = 1375

 Score =  330 bits (847), Expect = 2e-88
 Identities = 164/183 (89%), Positives = 168/183 (91%)
 Frame = -2

Query: 549 RTDCGTTRGISVSPHQNGRMPERIFIQTLIGRVLADDIYMGQRCVAIRNQDIGIGLVNRF 370
           RTDCGTTRGISVSP QNG MPERIFIQTLIGRVLADDIYMG RC+AIRNQDIGIGLVNRF
Sbjct: 207 RTDCGTTRGISVSP-QNGMMPERIFIQTLIGRVLADDIYMGPRCIAIRNQDIGIGLVNRF 265

Query: 369 ITFQAQPISIRTPFTCKSTSWICRLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLTL 190
           ITF+AQPISIRTPFTC+STSWICRLCYGRSPTHGDLVELGEAVGIIA QSIGEPGTQLTL
Sbjct: 266 ITFRAQPISIRTPFTCRSTSWICRLCYGRSPTHGDLVELGEAVGIIASQSIGEPGTQLTL 325

Query: 189 RXXXXXXXXXXXTAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYVTIESENII 10
           R           TAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYVTIESE+II
Sbjct: 326 RTFHTGGVFTGGTAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYVTIESEDII 385

Query: 9   HNV 1
           HNV
Sbjct: 386 HNV 388


>gb|AEI27566.1| RNA polymerase beta subunit [Neillia thibetica]
          Length = 1258

 Score =  330 bits (846), Expect = 2e-88
 Identities = 163/183 (89%), Positives = 167/183 (91%)
 Frame = -2

Query: 549 RTDCGTTRGISVSPHQNGRMPERIFIQTLIGRVLADDIYMGQRCVAIRNQDIGIGLVNRF 370
           RTDCGT RGISVSP +NG MPERIFIQTLIGRVLADDIY+G RC+A+RNQDIGIGLVNRF
Sbjct: 176 RTDCGTIRGISVSP-RNGMMPERIFIQTLIGRVLADDIYIGPRCIAVRNQDIGIGLVNRF 234

Query: 369 ITFQAQPISIRTPFTCKSTSWICRLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLTL 190
           ITFQAQPISIRTPFTCKSTSWICRLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLTL
Sbjct: 235 ITFQAQPISIRTPFTCKSTSWICRLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLTL 294

Query: 189 RXXXXXXXXXXXTAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYVTIESENII 10
           R           TAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYID YVTIESENII
Sbjct: 295 RTFHTGGVFTGGTAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDFYVTIESENII 354

Query: 9   HNV 1
           HNV
Sbjct: 355 HNV 357


>gb|AEI27559.1| RNA polymerase beta subunit [Dryas octopetala]
          Length = 1258

 Score =  329 bits (843), Expect = 5e-88
 Identities = 163/183 (89%), Positives = 166/183 (90%)
 Frame = -2

Query: 549 RTDCGTTRGISVSPHQNGRMPERIFIQTLIGRVLADDIYMGQRCVAIRNQDIGIGLVNRF 370
           RTDCGT RGIS SP +NG MPERIFIQTLIGRVLADDIY+G RC+AIRNQDIGIGLVNRF
Sbjct: 176 RTDCGTIRGISASP-RNGMMPERIFIQTLIGRVLADDIYIGPRCIAIRNQDIGIGLVNRF 234

Query: 369 ITFQAQPISIRTPFTCKSTSWICRLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLTL 190
           ITFQ QPISIRTPFTCKSTSWICRLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLTL
Sbjct: 235 ITFQTQPISIRTPFTCKSTSWICRLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLTL 294

Query: 189 RXXXXXXXXXXXTAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYVTIESENII 10
           R           TAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYVTIESENII
Sbjct: 295 RTFHTGGVFTGGTAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYVTIESENII 354

Query: 9   HNV 1
           HNV
Sbjct: 355 HNV 357


>ref|YP_008965483.1| RNA polymerase beta' subunit [Pyrus spinosa]
           gi|565666455|emb|CDI73555.1| RNA polymerase beta'
           subunit [Pyrus spinosa]
          Length = 1373

 Score =  328 bits (842), Expect = 6e-88
 Identities = 162/183 (88%), Positives = 166/183 (90%)
 Frame = -2

Query: 549 RTDCGTTRGISVSPHQNGRMPERIFIQTLIGRVLADDIYMGQRCVAIRNQDIGIGLVNRF 370
           RTDCGT RGISVSP QNG MPERIFIQTLIGRVLADDIY+G RC+A+RNQDIGIGLV RF
Sbjct: 217 RTDCGTIRGISVSP-QNGMMPERIFIQTLIGRVLADDIYIGPRCIAVRNQDIGIGLVTRF 275

Query: 369 ITFQAQPISIRTPFTCKSTSWICRLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLTL 190
           ITFQ QPISIRTPFTCKSTSWICRLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLTL
Sbjct: 276 ITFQTQPISIRTPFTCKSTSWICRLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLTL 335

Query: 189 RXXXXXXXXXXXTAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYVTIESENII 10
           R           TAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYVTIESEN+I
Sbjct: 336 RTFHTGGVFTGGTAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYVTIESENLI 395

Query: 9   HNV 1
           HNV
Sbjct: 396 HNV 398


>ref|YP_004842229.1| RNA polymerase beta' subunit [Pyrus pyrifolia]
           gi|345433551|dbj|BAK69373.1| RNA polymerase beta'
           subunit [Pyrus pyrifolia]
          Length = 1373

 Score =  328 bits (842), Expect = 6e-88
 Identities = 162/183 (88%), Positives = 166/183 (90%)
 Frame = -2

Query: 549 RTDCGTTRGISVSPHQNGRMPERIFIQTLIGRVLADDIYMGQRCVAIRNQDIGIGLVNRF 370
           RTDCGT RGISVSP QNG MPERIFIQTLIGRVLADDIY+G RC+A+RNQDIGIGLV RF
Sbjct: 217 RTDCGTIRGISVSP-QNGMMPERIFIQTLIGRVLADDIYIGPRCIAVRNQDIGIGLVTRF 275

Query: 369 ITFQAQPISIRTPFTCKSTSWICRLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLTL 190
           ITFQ QPISIRTPFTCKSTSWICRLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLTL
Sbjct: 276 ITFQTQPISIRTPFTCKSTSWICRLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLTL 335

Query: 189 RXXXXXXXXXXXTAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYVTIESENII 10
           R           TAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYVTIESEN+I
Sbjct: 336 RTFHTGGVFTGGTAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYVTIESENLI 395

Query: 9   HNV 1
           HNV
Sbjct: 396 HNV 398


>ref|YP_005296090.1| rpoC2 gene product (chloroplast) [Pentactina rupicola]
           gi|371532613|gb|AEX31723.1| RNA polymerase beta'
           subunit-2 (chloroplast) [Pentactina rupicola]
          Length = 1372

 Score =  328 bits (841), Expect = 8e-88
 Identities = 161/183 (87%), Positives = 165/183 (90%)
 Frame = -2

Query: 549 RTDCGTTRGISVSPHQNGRMPERIFIQTLIGRVLADDIYMGQRCVAIRNQDIGIGLVNRF 370
           RTDCGT RGISVSP +NG MPERIFIQTLIGRVLADDIY+G RC+A+RNQDIGIGLVNRF
Sbjct: 217 RTDCGTIRGISVSP-RNGMMPERIFIQTLIGRVLADDIYIGPRCIAVRNQDIGIGLVNRF 275

Query: 369 ITFQAQPISIRTPFTCKSTSWICRLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLTL 190
           ITFQ QPISIRTPFTCKSTSWICRLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLTL
Sbjct: 276 ITFQTQPISIRTPFTCKSTSWICRLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLTL 335

Query: 189 RXXXXXXXXXXXTAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYVTIESENII 10
           R            AEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYVTI SENII
Sbjct: 336 RTFHTGGVFTGGIAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYVTIRSENII 395

Query: 9   HNV 1
           HNV
Sbjct: 396 HNV 398


>gb|ABV65775.1| RNA polymerase beta'' subunit, partial (chloroplast) [Spiraea
           tomentosa]
          Length = 1264

 Score =  328 bits (841), Expect = 8e-88
 Identities = 161/183 (87%), Positives = 165/183 (90%)
 Frame = -2

Query: 549 RTDCGTTRGISVSPHQNGRMPERIFIQTLIGRVLADDIYMGQRCVAIRNQDIGIGLVNRF 370
           RTDCGT RGISVSP +NG MPERIFIQTLIGRVLADDIY+G RC+A+RNQDIGIGLVNRF
Sbjct: 187 RTDCGTIRGISVSP-RNGMMPERIFIQTLIGRVLADDIYIGPRCIAVRNQDIGIGLVNRF 245

Query: 369 ITFQAQPISIRTPFTCKSTSWICRLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLTL 190
           ITFQ QPISIRTPFTCKSTSWICRLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLTL
Sbjct: 246 ITFQTQPISIRTPFTCKSTSWICRLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLTL 305

Query: 189 RXXXXXXXXXXXTAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYVTIESENII 10
           R            AEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYVTI SENII
Sbjct: 306 RTFHTGGVFTGGIAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYVTIRSENII 365

Query: 9   HNV 1
           HNV
Sbjct: 366 HNV 368


>gb|ABV65740.1| RNA polymerase beta'' subunit (chloroplast) [Heuchera sanguinea]
          Length = 1376

 Score =  328 bits (841), Expect = 8e-88
 Identities = 163/183 (89%), Positives = 168/183 (91%)
 Frame = -2

Query: 549 RTDCGTTRGISVSPHQNGRMPERIFIQTLIGRVLADDIYMGQRCVAIRNQDIGIGLVNRF 370
           RTDCGT+RGISVSP QNG MPERIFIQTLIGRVLADDIYMG RC+AIRNQDIGIGLVNRF
Sbjct: 221 RTDCGTSRGISVSP-QNGMMPERIFIQTLIGRVLADDIYMGSRCIAIRNQDIGIGLVNRF 279

Query: 369 ITFQAQPISIRTPFTCKSTSWICRLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLTL 190
           ITF+AQPISIRTPFTC+STSWICRLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLTL
Sbjct: 280 ITFRAQPISIRTPFTCRSTSWICRLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLTL 339

Query: 189 RXXXXXXXXXXXTAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYVTIESENII 10
           R           TAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLC IDLYVTIESE+II
Sbjct: 340 RTFHTGGVFTGGTAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCSIDLYVTIESEDII 399

Query: 9   HNV 1
           HNV
Sbjct: 400 HNV 402


>gb|AHN13527.1| RNA polymerase beta' subunit (chloroplast) [Prunus kansuensis]
          Length = 1368

 Score =  328 bits (840), Expect = 1e-87
 Identities = 162/183 (88%), Positives = 166/183 (90%)
 Frame = -2

Query: 549 RTDCGTTRGISVSPHQNGRMPERIFIQTLIGRVLADDIYMGQRCVAIRNQDIGIGLVNRF 370
           RTDCGT RGISVSP +NG MPERIFIQTLIGRVLADDIY+G RC+A+RNQDIGIGLVNRF
Sbjct: 217 RTDCGTIRGISVSP-RNGMMPERIFIQTLIGRVLADDIYIGPRCIAVRNQDIGIGLVNRF 275

Query: 369 ITFQAQPISIRTPFTCKSTSWICRLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLTL 190
           IT Q QPISIRTPFTCKSTSWICRLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLTL
Sbjct: 276 ITLQTQPISIRTPFTCKSTSWICRLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLTL 335

Query: 189 RXXXXXXXXXXXTAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYVTIESENII 10
           R           TAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYVTIESENII
Sbjct: 336 RTFHTGGVFTGGTAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYVTIESENII 395

Query: 9   HNV 1
           HNV
Sbjct: 396 HNV 398


>ref|YP_009020028.1| RNA polymerase beta' subunit [Prunus mume]
           gi|589061043|gb|AHK26864.1| RNA polymerase beta' subunit
           [Prunus mume]
          Length = 1368

 Score =  328 bits (840), Expect = 1e-87
 Identities = 162/183 (88%), Positives = 166/183 (90%)
 Frame = -2

Query: 549 RTDCGTTRGISVSPHQNGRMPERIFIQTLIGRVLADDIYMGQRCVAIRNQDIGIGLVNRF 370
           RTDCGT RGISVSP +NG MPERIFIQTLIGRVLADDIY+G RC+A+RNQDIGIGLVNRF
Sbjct: 217 RTDCGTIRGISVSP-RNGMMPERIFIQTLIGRVLADDIYIGPRCIAVRNQDIGIGLVNRF 275

Query: 369 ITFQAQPISIRTPFTCKSTSWICRLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLTL 190
           IT Q QPISIRTPFTCKSTSWICRLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLTL
Sbjct: 276 ITLQTQPISIRTPFTCKSTSWICRLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLTL 335

Query: 189 RXXXXXXXXXXXTAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYVTIESENII 10
           R           TAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYVTIESENII
Sbjct: 336 RTFHTGGVFTGGTAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYVTIESENII 395

Query: 9   HNV 1
           HNV
Sbjct: 396 HNV 398


>gb|AHE41667.1| RNA polymerase beta' subunit, partial (chloroplast) [Ribes
           fasciculatum var. chinense]
          Length = 1365

 Score =  328 bits (840), Expect = 1e-87
 Identities = 162/183 (88%), Positives = 168/183 (91%)
 Frame = -2

Query: 549 RTDCGTTRGISVSPHQNGRMPERIFIQTLIGRVLADDIYMGQRCVAIRNQDIGIGLVNRF 370
           RTDCGTTRGISVSP QNG MPERIFIQTLIGRVLADDIYMG RC+AIRNQDIGIGLVNRF
Sbjct: 207 RTDCGTTRGISVSP-QNGMMPERIFIQTLIGRVLADDIYMGSRCIAIRNQDIGIGLVNRF 265

Query: 369 ITFQAQPISIRTPFTCKSTSWICRLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLTL 190
           ITF+AQPISIRTPFTC+STSWICRLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLTL
Sbjct: 266 ITFRAQPISIRTPFTCRSTSWICRLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLTL 325

Query: 189 RXXXXXXXXXXXTAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYVTIESENII 10
           R           TAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCY++LYV IESE+II
Sbjct: 326 RTFHTGGVFTGGTAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYMNLYVIIESEDII 385

Query: 9   HNV 1
           HNV
Sbjct: 386 HNV 388


>gb|AHE41654.1| RNA polymerase beta' subunit (chloroplast) [Ribes fasciculatum var.
           chinense]
          Length = 1378

 Score =  328 bits (840), Expect = 1e-87
 Identities = 162/183 (88%), Positives = 168/183 (91%)
 Frame = -2

Query: 549 RTDCGTTRGISVSPHQNGRMPERIFIQTLIGRVLADDIYMGQRCVAIRNQDIGIGLVNRF 370
           RTDCGTTRGISVSP QNG MPERIFIQTLIGRVLADDIYMG RC+AIRNQDIGIGLVNRF
Sbjct: 221 RTDCGTTRGISVSP-QNGMMPERIFIQTLIGRVLADDIYMGSRCIAIRNQDIGIGLVNRF 279

Query: 369 ITFQAQPISIRTPFTCKSTSWICRLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLTL 190
           ITF+AQPISIRTPFTC+STSWICRLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLTL
Sbjct: 280 ITFRAQPISIRTPFTCRSTSWICRLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLTL 339

Query: 189 RXXXXXXXXXXXTAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYVTIESENII 10
           R           TAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCY++LYV IESE+II
Sbjct: 340 RTFHTGGVFTGGTAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYMNLYVIIESEDII 399

Query: 9   HNV 1
           HNV
Sbjct: 400 HNV 402


>ref|YP_008963470.1| RNA polymerase beta' subunit (chloroplast) [Penthorum chinense]
           gi|403226771|gb|AFR25650.1| RNA polymerase beta' subunit
           (chloroplast) [Penthorum chinense]
          Length = 1387

 Score =  328 bits (840), Expect = 1e-87
 Identities = 159/183 (86%), Positives = 169/183 (92%)
 Frame = -2

Query: 549 RTDCGTTRGISVSPHQNGRMPERIFIQTLIGRVLADDIYMGQRCVAIRNQDIGIGLVNRF 370
           RTDCGTTRGISVSP +NG +PER+FIQTLIGRVLADDIYMG RC+A+RNQDIGIGL+NRF
Sbjct: 221 RTDCGTTRGISVSP-RNGMLPERVFIQTLIGRVLADDIYMGPRCIAVRNQDIGIGLINRF 279

Query: 369 ITFQAQPISIRTPFTCKSTSWICRLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLTL 190
           ITF+AQPISIRTPFTC+STSWICRLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLTL
Sbjct: 280 ITFRAQPISIRTPFTCRSTSWICRLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLTL 339

Query: 189 RXXXXXXXXXXXTAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYVTIESENII 10
           R           T+EHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYVTIESE+II
Sbjct: 340 RTFHTGGVFTGGTSEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYVTIESEDII 399

Query: 9   HNV 1
           HNV
Sbjct: 400 HNV 402


>ref|YP_007025458.1| RNA polymerase beta subunit (chloroplast) [Fragaria virginiana]
           gi|363989835|gb|AET62729.1| RNA polymerase beta subunit
           (chloroplast) [Fragaria virginiana]
          Length = 1387

 Score =  328 bits (840), Expect = 1e-87
 Identities = 164/183 (89%), Positives = 166/183 (90%)
 Frame = -2

Query: 549 RTDCGTTRGISVSPHQNGRMPERIFIQTLIGRVLADDIYMGQRCVAIRNQDIGIGLVNRF 370
           RTDCGTTRGISVSP +NG MPERIFIQTLIGRVLADDIY+G RCVAIRNQDIGIGLVNRF
Sbjct: 217 RTDCGTTRGISVSP-RNGMMPERIFIQTLIGRVLADDIYIGTRCVAIRNQDIGIGLVNRF 275

Query: 369 ITFQAQPISIRTPFTCKSTSWICRLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLTL 190
           ITFQ QPI IRTPFTCKSTSWICRLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLTL
Sbjct: 276 ITFQTQPIPIRTPFTCKSTSWICRLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLTL 335

Query: 189 RXXXXXXXXXXXTAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYVTIESENII 10
           R           TAEHVRAPSNGKIKFNE LVHPTRTRHGHPAFLCYIDLYVTIESENII
Sbjct: 336 RTFHTGGVFTGGTAEHVRAPSNGKIKFNEYLVHPTRTRHGHPAFLCYIDLYVTIESENII 395

Query: 9   HNV 1
           HNV
Sbjct: 396 HNV 398


>ref|YP_006883327.1| RNA polymerase beta subunit [Fragaria mandshurica]
           gi|378554772|gb|AFC17706.1| RNA polymerase beta subunit
           [Fragaria mandshurica]
          Length = 1387

 Score =  328 bits (840), Expect = 1e-87
 Identities = 164/183 (89%), Positives = 166/183 (90%)
 Frame = -2

Query: 549 RTDCGTTRGISVSPHQNGRMPERIFIQTLIGRVLADDIYMGQRCVAIRNQDIGIGLVNRF 370
           RTDCGTTRGISVSP +NG MPERIFIQTLIGRVLADDIY+G RCVAIRNQDIGIGLVNRF
Sbjct: 217 RTDCGTTRGISVSP-RNGMMPERIFIQTLIGRVLADDIYIGTRCVAIRNQDIGIGLVNRF 275

Query: 369 ITFQAQPISIRTPFTCKSTSWICRLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLTL 190
           ITFQ QPI IRTPFTCKSTSWICRLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLTL
Sbjct: 276 ITFQTQPIPIRTPFTCKSTSWICRLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLTL 335

Query: 189 RXXXXXXXXXXXTAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYVTIESENII 10
           R           TAEHVRAPSNGKIKFNE LVHPTRTRHGHPAFLCYIDLYVTIESENII
Sbjct: 336 RTFHTGGVFTGGTAEHVRAPSNGKIKFNEYLVHPTRTRHGHPAFLCYIDLYVTIESENII 395

Query: 9   HNV 1
           HNV
Sbjct: 396 HNV 398


>ref|YP_006883253.1| RNA polymerase beta subunit (chloroplast) [Fragaria vesca subsp.
           bracteata] gi|428697189|ref|YP_007025373.1| RNA
           polymerase beta subunit (chloroplast) [Fragaria
           chiloensis] gi|357198728|gb|AET62644.1| RNA polymerase
           beta subunit (chloroplast) [Fragaria chiloensis]
           gi|378554697|gb|AFC17632.1| RNA polymerase beta subunit
           (chloroplast) [Fragaria vesca subsp. bracteata]
           gi|407080456|gb|AFS89545.1| RNA polymerase beta subunit
           (chloroplast) [Fragaria chiloensis]
          Length = 1387

 Score =  328 bits (840), Expect = 1e-87
 Identities = 164/183 (89%), Positives = 166/183 (90%)
 Frame = -2

Query: 549 RTDCGTTRGISVSPHQNGRMPERIFIQTLIGRVLADDIYMGQRCVAIRNQDIGIGLVNRF 370
           RTDCGTTRGISVSP +NG MPERIFIQTLIGRVLADDIY+G RCVAIRNQDIGIGLVNRF
Sbjct: 217 RTDCGTTRGISVSP-RNGMMPERIFIQTLIGRVLADDIYIGTRCVAIRNQDIGIGLVNRF 275

Query: 369 ITFQAQPISIRTPFTCKSTSWICRLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLTL 190
           ITFQ QPI IRTPFTCKSTSWICRLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLTL
Sbjct: 276 ITFQTQPIPIRTPFTCKSTSWICRLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLTL 335

Query: 189 RXXXXXXXXXXXTAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYVTIESENII 10
           R           TAEHVRAPSNGKIKFNE LVHPTRTRHGHPAFLCYIDLYVTIESENII
Sbjct: 336 RTFHTGGVFTGGTAEHVRAPSNGKIKFNEYLVHPTRTRHGHPAFLCYIDLYVTIESENII 395

Query: 9   HNV 1
           HNV
Sbjct: 396 HNV 398


>gb|AFQ39110.1| RNA polymerase beta subunit, partial [Fragaria vesca subsp.
           americana] gi|402238710|gb|AFQ39112.1| RNA polymerase
           beta subunit, partial [Fragaria vesca subsp. vesca]
           gi|402238713|gb|AFQ39114.1| RNA polymerase beta subunit,
           partial [Fragaria x bifera] gi|402238716|gb|AFQ39116.1|
           RNA polymerase beta subunit, partial [Fragaria x
           ananassa subsp. cuneifolia] gi|402238719|gb|AFQ39118.1|
           RNA polymerase beta subunit, partial [Fragaria
           virginiana] gi|402238722|gb|AFQ39120.1| RNA polymerase
           beta subunit, partial [Fragaria bucharica]
           gi|402238725|gb|AFQ39122.1| RNA polymerase beta subunit,
           partial [Fragaria orientalis]
           gi|402238728|gb|AFQ39124.1| RNA polymerase beta subunit,
           partial [Fragaria viridis]
          Length = 427

 Score =  328 bits (840), Expect = 1e-87
 Identities = 164/183 (89%), Positives = 166/183 (90%)
 Frame = -2

Query: 549 RTDCGTTRGISVSPHQNGRMPERIFIQTLIGRVLADDIYMGQRCVAIRNQDIGIGLVNRF 370
           RTDCGTTRGISVSP +NG MPERIFIQTLIGRVLADDIY+G RCVAIRNQDIGIGLVNRF
Sbjct: 217 RTDCGTTRGISVSP-RNGMMPERIFIQTLIGRVLADDIYIGTRCVAIRNQDIGIGLVNRF 275

Query: 369 ITFQAQPISIRTPFTCKSTSWICRLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLTL 190
           ITFQ QPI IRTPFTCKSTSWICRLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLTL
Sbjct: 276 ITFQTQPIPIRTPFTCKSTSWICRLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLTL 335

Query: 189 RXXXXXXXXXXXTAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYVTIESENII 10
           R           TAEHVRAPSNGKIKFNE LVHPTRTRHGHPAFLCYIDLYVTIESENII
Sbjct: 336 RTFHTGGVFTGGTAEHVRAPSNGKIKFNEYLVHPTRTRHGHPAFLCYIDLYVTIESENII 395

Query: 9   HNV 1
           HNV
Sbjct: 396 HNV 398