BLASTX nr result

ID: Paeonia24_contig00020736 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Paeonia24_contig00020736
         (249 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004828915.1| small nuclear ribonucleoprotein-associated p...    57   3e-06
ref|XP_006413865.1| hypothetical protein EUTSA_v10026002mg [Eutr...    56   6e-06
ref|XP_006284390.1| hypothetical protein CARUB_v10005560mg [Caps...    56   6e-06
ref|NP_193777.1| small nuclear ribonucleoprotein associated prot...    56   6e-06
ref|XP_004993631.1| hypothetical protein PTSG_12357 [Salpingoeca...    56   6e-06
ref|XP_002867880.1| hypothetical protein ARALYDRAFT_492815 [Arab...    56   6e-06
ref|XP_002263359.1| PREDICTED: small nuclear ribonucleoprotein-a...    55   8e-06

>ref|XP_004828915.1| small nuclear ribonucleoprotein-associated protein B, putative
           [Babesia equi] gi|429327489|gb|AFZ79249.1| small nuclear
           ribonucleoprotein-associated protein B, putative
           [Babesia equi]
          Length = 153

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 25/59 (42%), Positives = 41/59 (69%), Gaps = 4/59 (6%)
 Frame = +3

Query: 3   VRVSIRGGCQLIGHLLAYDEHMNLAISDCKRIKDVSAAAGEEI----GFVLLRGDEVVS 167
           VRV+++ G + +G L+A+D+HMNL ++DC+  +      G+EI    GF+LLRG+ +VS
Sbjct: 16  VRVTVKDGRKFVGTLIAFDKHMNLVLADCEEFRMTKGKEGKEIKRTLGFILLRGENIVS 74


>ref|XP_006413865.1| hypothetical protein EUTSA_v10026002mg [Eutrema salsugineum]
           gi|557115035|gb|ESQ55318.1| hypothetical protein
           EUTSA_v10026002mg [Eutrema salsugineum]
          Length = 263

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 27/66 (40%), Positives = 42/66 (63%), Gaps = 10/66 (15%)
 Frame = +3

Query: 3   VRVSIRGGCQLIGHLLAYDEHMNLAISDCKRIKDVSAAAGEEI----------GFVLLRG 152
           +RV+I+ G QL+G  +A+D HMNL + DC+  + +  A G++I          G VLLRG
Sbjct: 17  MRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKKINEEREDRRTLGLVLLRG 76

Query: 153 DEVVSV 170
           +EV+S+
Sbjct: 77  EEVISM 82


>ref|XP_006284390.1| hypothetical protein CARUB_v10005560mg [Capsella rubella]
           gi|565445302|ref|XP_006284391.1| hypothetical protein
           CARUB_v10005560mg [Capsella rubella]
           gi|482553095|gb|EOA17288.1| hypothetical protein
           CARUB_v10005560mg [Capsella rubella]
           gi|482553096|gb|EOA17289.1| hypothetical protein
           CARUB_v10005560mg [Capsella rubella]
          Length = 254

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 27/66 (40%), Positives = 42/66 (63%), Gaps = 10/66 (15%)
 Frame = +3

Query: 3   VRVSIRGGCQLIGHLLAYDEHMNLAISDCKRIKDVSAAAGEEI----------GFVLLRG 152
           +RV+I+ G QL+G  +A+D HMNL + DC+  + +  A G++I          G VLLRG
Sbjct: 17  MRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKKINEEREDRRTLGLVLLRG 76

Query: 153 DEVVSV 170
           +EV+S+
Sbjct: 77  EEVISM 82


>ref|NP_193777.1| small nuclear ribonucleoprotein associated protein B [Arabidopsis
           thaliana] gi|30685110|ref|NP_849414.1| small nuclear
           ribonucleoprotein associated protein B [Arabidopsis
           thaliana] gi|79325195|ref|NP_001031682.1| small nuclear
           ribonucleoprotein associated protein B [Arabidopsis
           thaliana] gi|238480869|ref|NP_001154258.1| small nuclear
           ribonucleoprotein associated protein B [Arabidopsis
           thaliana] gi|5262167|emb|CAB45810.1| putative snRNP
           protein [Arabidopsis thaliana]
           gi|7268840|emb|CAB79044.1| putative snRNP protein
           [Arabidopsis thaliana] gi|28393634|gb|AAO42236.1|
           putative snRNP protein [Arabidopsis thaliana]
           gi|28827492|gb|AAO50590.1| putative snRNP protein
           [Arabidopsis thaliana] gi|222423490|dbj|BAH19715.1|
           AT4G20440 [Arabidopsis thaliana]
           gi|332658930|gb|AEE84330.1| small nuclear
           ribonucleoprotein associated protein B [Arabidopsis
           thaliana] gi|332658931|gb|AEE84331.1| small nuclear
           ribonucleoprotein associated protein B [Arabidopsis
           thaliana] gi|332658932|gb|AEE84332.1| small nuclear
           ribonucleoprotein associated protein B [Arabidopsis
           thaliana] gi|332658933|gb|AEE84333.1| small nuclear
           ribonucleoprotein associated protein B [Arabidopsis
           thaliana]
          Length = 257

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 27/66 (40%), Positives = 42/66 (63%), Gaps = 10/66 (15%)
 Frame = +3

Query: 3   VRVSIRGGCQLIGHLLAYDEHMNLAISDCKRIKDVSAAAGEEI----------GFVLLRG 152
           +RV+I+ G QL+G  +A+D HMNL + DC+  + +  A G++I          G VLLRG
Sbjct: 17  MRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKKINEEREDRRTLGLVLLRG 76

Query: 153 DEVVSV 170
           +EV+S+
Sbjct: 77  EEVISM 82


>ref|XP_004993631.1| hypothetical protein PTSG_12357 [Salpingoeca rosetta]
           gi|326428499|gb|EGD74069.1| hypothetical protein
           PTSG_12357 [Salpingoeca rosetta]
          Length = 212

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 26/63 (41%), Positives = 40/63 (63%), Gaps = 7/63 (11%)
 Frame = +3

Query: 3   VRVSIRGGCQLIGHLLAYDEHMNLAISDCKRIKDVSAAAGEE-------IGFVLLRGDEV 161
           +RV+   G  L+G  +AYD+HMN+ +SDC+  + V A  G +       +GF+LLRG+ V
Sbjct: 17  MRVTTEDGRMLVGTFMAYDKHMNMVLSDCEEFRTVKAKKGTDEQTQKRALGFILLRGENV 76

Query: 162 VSV 170
           VS+
Sbjct: 77  VSM 79


>ref|XP_002867880.1| hypothetical protein ARALYDRAFT_492815 [Arabidopsis lyrata subsp.
           lyrata] gi|297313716|gb|EFH44139.1| hypothetical protein
           ARALYDRAFT_492815 [Arabidopsis lyrata subsp. lyrata]
          Length = 258

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 27/66 (40%), Positives = 42/66 (63%), Gaps = 10/66 (15%)
 Frame = +3

Query: 3   VRVSIRGGCQLIGHLLAYDEHMNLAISDCKRIKDVSAAAGEEI----------GFVLLRG 152
           +RV+I+ G QL+G  +A+D HMNL + DC+  + +  A G++I          G VLLRG
Sbjct: 17  MRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKKINEEREDRRTLGLVLLRG 76

Query: 153 DEVVSV 170
           +EV+S+
Sbjct: 77  EEVISM 82


>ref|XP_002263359.1| PREDICTED: small nuclear ribonucleoprotein-associated protein B'
           [Vitis vinifera] gi|147774905|emb|CAN61706.1|
           hypothetical protein VITISV_001610 [Vitis vinifera]
          Length = 276

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 26/65 (40%), Positives = 42/65 (64%), Gaps = 9/65 (13%)
 Frame = +3

Query: 3   VRVSIRGGCQLIGHLLAYDEHMNLAISDCKRIKDVSAAAGEE---------IGFVLLRGD 155
           +RV+I+ G QL+G  +A+D HMNL + DC+  + +  A G++         +G VLLRG+
Sbjct: 17  MRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKKNEEREERRTLGLVLLRGE 76

Query: 156 EVVSV 170
           EV+S+
Sbjct: 77  EVISM 81